WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G33530 AT3G33530 AT3G33530 AT3G33530 AT3G33530 |
| fragaria_vesca | FvH4_1g02820 FvH4_1g02820 FvH4_1g02820 FvH4_1g02820 |
| malus_domestica | MD02G1028100.v1.1 MD15G1169800.v1.1 |
| prunus_persica | Prupe.7G246700_v2.0.a1 |
| pyrus_communis | pycom02g02310 pycom15g15140 |
| rosa_chinensis | RchiOBHm_Chr2g0087941 |
| rosa_laevigata | RLG00000015913 |
| rosa_multiflora | Rmu_sc0013931.1_g000009 Rmu_sc0014136.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00153110 |
| rosa_rugosa | Rorug01G0479800 Rorug01G0479900 |
| rosa_samantha | Rh2AG034600 Rh2BG033600 Rh2CG034600 Rh2DG034300 |
| rosa_wichuraiana | Rw2G002700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2206 |
| Acc36I | ACCTGC | 1 cut(s) | 1802 |
| AccB1I | GGYRCC | 2 cut(s) | 2531, 3579 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1016, 3200 |
| AccBSI | CCGCTC | 1 cut(s) | 1043 |
| AccII | CGCG | 5 cut(s) | 249, 537, 2011, 3292, 3827 |
| AccIII | TCCGGA | 1 cut(s) | 1880 |
| AcoI | YGGCCR | 3 cut(s) | 310, 2231, 3639 |
| AcsI | RAATTY | 7 cut(s) | 387, 1095, 1717, 2208, 2396, 2523, 3379 |
| AcuI | CTGAAG | 7 cut(s) | 711, 1251, 1311, 1484, 2055, 3237, 3396 |
| AcyI | GRCGYC | 3 cut(s) | 839, 955, 2203 |
| AfaI | GTAC | 9 cut(s) | 500, 603, 991, 1536, 2541, 3357, 3553, 3912, 3986 |
| AflII | CTTAAG | 1 cut(s) | 1222 |
| AflIII | ACRYGT | 1 cut(s) | 3290 |
| AgsI | TTSAA | 9 cut(s) | 392, 410, 1241, 1722, 1813, 2192, 2926, 3938, 3980 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3880 |
| AhlI | ACTAGT | 1 cut(s) | 2164 |
| AjnI | CCWGG | 7 cut(s) | 32, 1303, 2014, 2527, 3221, 3671, 3928 |
| AleI | CACNNNNGTG | 2 cut(s) | 312, 1982 |
| Alw21I | GWGCWC | 4 cut(s) | 199, 1864, 2179, 3717 |
| Alw26I | GTCTC | 9 cut(s) | 107, 136, 533, 830, 1038, 1525, 1551, 2070, 3129 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3038, 3164 |
| Aor13HI | TCCGGA | 1 cut(s) | 1880 |
| AoxI | GGCC | 7 cut(s) | 310, 571, 1699, 2231, 2822, 3639, 3729 |
| ApaI | GGGCCC | 1 cut(s) | 3733 |
| ApoI | RAATTY | 7 cut(s) | 387, 1095, 1717, 2208, 2396, 2523, 3379 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1363, 1395, 2193, 2225 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1114, 1158, 1873, 3306, 3975 |
| AspA2I | CCTAGG | 1 cut(s) | 803 |
| AspLEI | GCGC | 5 cut(s) | 875, 1848, 2013, 2746, 3772 |
| AspS9I | GGNCC | 7 cut(s) | 53, 2027, 2899, 3531, 3621, 3729, 3730 |
| AsuC2I | CCSGG | 4 cut(s) | 51, 192, 1103, 2605 |
| AsuHPI | GGTGA | 8 cut(s) | 12, 272, 1091, 1762, 2478, 3059, 3204, 3911 |
| AvaII | GGWCC | 5 cut(s) | 53, 2027, 2899, 3531, 3621 |
| AvrII | CCTAGG | 1 cut(s) | 803 |
| BaeGI | GKGCMC | 3 cut(s) | 2670, 2913, 3733 |
| BalI | TGGCCA | 1 cut(s) | 2233 |
| BamHI | GGATCC | 1 cut(s) | 77 |
| BanI | GGYRCC | 2 cut(s) | 2531, 3579 |
| BanII | GRGCYC | 3 cut(s) | 1864, 2120, 3733 |
| BauI | CACGAG | 2 cut(s) | 864, 3359 |
| BbsI | GAAGAC | 3 cut(s) | 708, 1151, 3299 |
| Bbv12I | GWGCWC | 4 cut(s) | 199, 1864, 2179, 3717 |
| BceAI | ACGGC | 5 cut(s) | 48, 278, 297, 325, 3554 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1656, 1690 |
| BciT130I | CCWGG | 7 cut(s) | 34, 1305, 2016, 2529, 3223, 3673, 3930 |
| BclI | TGATCA | 1 cut(s) | 3694 |
| BcnI | CCSGG | 4 cut(s) | 51, 192, 1103, 2605 |
| BcoDI | GTCTC | 9 cut(s) | 107, 136, 533, 830, 1038, 1525, 1551, 2070, 3129 |
| BcuI | ACTAGT | 1 cut(s) | 2164 |
| BfaI | CTAG | 8 cut(s) | 693, 753, 804, 1562, 2165, 2802, 2933, 3998 |
| BfmI | CTRYAG | 5 cut(s) | 1119, 1587, 1917, 2142, 2904 |
| BfoI | RGCGCY | 1 cut(s) | 3773 |
| BfrI | CTTAAG | 1 cut(s) | 1222 |
| BfuAI | ACCTGC | 1 cut(s) | 1802 |
| BglII | AGATCT | 1 cut(s) | 1411 |
| BlnI | CCTAGG | 1 cut(s) | 803 |
| BlpI | GCTNAGC | 1 cut(s) | 944 |
| Bme18I | GGWCC | 5 cut(s) | 53, 2027, 2899, 3531, 3621 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3880 |
| BmgT120I | GGNCC | 7 cut(s) | 53, 2027, 2899, 3531, 3621, 3729, 3730 |
| BmrI | ACTGGG | 1 cut(s) | 2665 |
| BmuI | ACTGGG | 1 cut(s) | 2665 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1155 |
| BpiI | GAAGAC | 3 cut(s) | 708, 1151, 3299 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 506, 538, 3109, 3141 |
| BpmI | CTGGAG | 5 cut(s) | 140, 1326, 2436, 2498, 3402 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 944 |
| BpuEI | CTTGAG | 2 cut(s) | 1315, 3069 |
| BpuMI | CCSGG | 4 cut(s) | 51, 192, 1103, 2605 |
| Bsa29I | ATCGAT | 1 cut(s) | 1632 |
| BsaHI | GRCGYC | 3 cut(s) | 839, 955, 2203 |
| BsaI | GGTCTC | 2 cut(s) | 107, 3129 |
| BsaWI | WCCGGW | 3 cut(s) | 98, 479, 1880 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 461, 491, 960, 990 |
| Bse118I | RCCGGY | 1 cut(s) | 506 |
| Bse1I | ACTGG | 7 cut(s) | 1495, 1690, 1946, 2547, 2671, 3205, 3553 |
| Bse3DI | GCAATG | 2 cut(s) | 1938, 2598 |
| BseAI | TCCGGA | 1 cut(s) | 1880 |
| BseBI | CCWGG | 7 cut(s) | 34, 1305, 2016, 2529, 3223, 3673, 3930 |
| BseCI | ATCGAT | 1 cut(s) | 1632 |
| BseGI | GGATG | 9 cut(s) | 1026, 1111, 1345, 1942, 2051, 2341, 2763, 2847, 2849 |
| BseMI | GCAATG | 2 cut(s) | 1938, 2598 |
| BseNI | ACTGG | 7 cut(s) | 1495, 1690, 1946, 2547, 2671, 3205, 3553 |
| BseRI | GAGGAG | 5 cut(s) | 115, 174, 177, 278, 3893 |
| BseSI | GKGCMC | 3 cut(s) | 2670, 2913, 3733 |
| BseX3I | CGGCCG | 1 cut(s) | 310 |
| BseYI | CCCAGC | 1 cut(s) | 59 |
| Bsh1236I | CGCG | 5 cut(s) | 249, 537, 2011, 3292, 3827 |
| Bsh1285I | CGRYCG | 1 cut(s) | 313 |
| BshFI | GGCC | 7 cut(s) | 312, 573, 1701, 2233, 2824, 3641, 3731 |
| BshNI | GGYRCC | 2 cut(s) | 2531, 3579 |
| BshVI | ATCGAT | 1 cut(s) | 1632 |
| BsiEI | CGRYCG | 1 cut(s) | 313 |
| BsiHKAI | GWGCWC | 4 cut(s) | 199, 1864, 2179, 3717 |
| BsiSI | CCGG | 9 cut(s) | 51, 99, 192, 480, 507, 1103, 1881, 2604, 2623 |
| BslFI | GGGAC | 3 cut(s) | 78, 1639, 2912 |
| BsmAI | GTCTC | 9 cut(s) | 107, 136, 533, 830, 1038, 1525, 1551, 2070, 3129 |
| BsmBI | CGTCTC | 4 cut(s) | 136, 830, 1038, 1551 |
| BsmFI | GGGAC | 3 cut(s) | 78, 1639, 2912 |
| BsmI | GAATGC | 2 cut(s) | 1660, 3342 |
| BsnI | GGCC | 7 cut(s) | 312, 573, 1701, 2233, 2824, 3641, 3731 |
| Bso31I | GGTCTC | 2 cut(s) | 107, 3129 |
| Bsp120I | GGGCCC | 1 cut(s) | 3729 |
| Bsp1286I | GDGCHC | 8 cut(s) | 199, 1864, 2120, 2179, 2670, 2913, 3717, 3733 |
| Bsp13I | TCCGGA | 1 cut(s) | 1880 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 944 |
| Bsp19I | CCATGG | 3 cut(s) | 993, 1398, 2274 |
| BspANI | GGCC | 7 cut(s) | 312, 573, 1701, 2233, 2824, 3641, 3731 |
| BspDI | ATCGAT | 1 cut(s) | 1632 |
| BspEI | TCCGGA | 1 cut(s) | 1880 |
| BspFNI | CGCG | 5 cut(s) | 249, 537, 2011, 3292, 3827 |
| BspMAI | CTGCAG | 1 cut(s) | 1591 |
| BspMI | ACCTGC | 1 cut(s) | 1802 |
| BspQI | GCTCTTC | 1 cut(s) | 1974 |
| BspT107I | GGYRCC | 2 cut(s) | 2531, 3579 |
| BspTI | CTTAAG | 1 cut(s) | 1222 |
| BspTNI | GGTCTC | 2 cut(s) | 107, 3129 |
| BsrBI | CCGCTC | 1 cut(s) | 1043 |
| BsrDI | GCAATG | 2 cut(s) | 1938, 2598 |
| BsrFI | RCCGGY | 1 cut(s) | 506 |
| BsrI | ACTGG | 7 cut(s) | 1495, 1690, 1946, 2547, 2671, 3205, 3553 |
| BssAI | RCCGGY | 1 cut(s) | 506 |
| BssNI | GRCGYC | 3 cut(s) | 839, 955, 2203 |
| BssSI | CACGAG | 2 cut(s) | 864, 3359 |
| BssT1I | CCWWGG | 7 cut(s) | 803, 993, 1398, 2197, 2274, 3311, 3636 |
| Bst2BI | CACGAG | 2 cut(s) | 864, 3359 |
| Bst2UI | CCWGG | 7 cut(s) | 34, 1305, 2016, 2529, 3223, 3673, 3930 |
| Bst6I | CTCTTC | 8 cut(s) | 110, 993, 1120, 1516, 1974, 2813, 3145, 3492 |
| BstACI | GRCGYC | 3 cut(s) | 839, 955, 2203 |
| BstAFI | CTTAAG | 1 cut(s) | 1222 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3023 |
| BstDSI | CCRYGG | 5 cut(s) | 307, 993, 1398, 2274, 2836 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3764 |
| BstF5I | GGATG | 9 cut(s) | 1026, 1111, 1345, 1942, 2051, 2341, 2763, 2847, 2849 |
| BstFNI | CGCG | 5 cut(s) | 249, 537, 2011, 3292, 3827 |
| BstH2I | RGCGCY | 1 cut(s) | 3773 |
| BstHHI | GCGC | 5 cut(s) | 875, 1848, 2013, 2746, 3772 |
| BstMAI | GTCTC | 9 cut(s) | 107, 136, 533, 830, 1038, 1525, 1551, 2070, 3129 |
| BstMCI | CGRYCG | 1 cut(s) | 313 |
| BstNI | CCWGG | 7 cut(s) | 34, 1305, 2016, 2529, 3223, 3673, 3930 |
| BstNSI | RCATGY | 2 cut(s) | 983, 2744 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1155 |
| BstSFI | CTRYAG | 5 cut(s) | 1119, 1587, 1917, 2142, 2904 |
| BstSLI | GKGCMC | 3 cut(s) | 2670, 2913, 3733 |
| BstUI | CGCG | 5 cut(s) | 249, 537, 2011, 3292, 3827 |
| BstV2I | GAAGAC | 3 cut(s) | 708, 1151, 3299 |
| BstX2I | RGATCY | 5 cut(s) | 77, 449, 1411, 2491, 2860 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3611 |
| BstYI | RGATCY | 5 cut(s) | 77, 449, 1411, 2491, 2860 |
| BstZI | CGGCCG | 1 cut(s) | 310 |
| Bsu15I | ATCGAT | 1 cut(s) | 1632 |
| BsuRI | GGCC | 7 cut(s) | 312, 573, 1701, 2233, 2824, 3641, 3731 |
| BsuTUI | ATCGAT | 1 cut(s) | 1632 |
| BtgI | CCRYGG | 5 cut(s) | 307, 993, 1398, 2274, 2836 |
| BtsCI | GGATG | 9 cut(s) | 1026, 1111, 1345, 1942, 2051, 2341, 2763, 2847, 2849 |
| BtsI | GCAGTG | 1 cut(s) | 2750 |
| BtsIMutI | CAGTG | 5 cut(s) | 667, 1287, 2118, 2750, 3546 |
| BveI | ACCTGC | 1 cut(s) | 1802 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3038, 3164 |
| CfoI | GCGC | 5 cut(s) | 875, 1848, 2013, 2746, 3772 |
| Cfr10I | RCCGGY | 1 cut(s) | 506 |
| Cfr13I | GGNCC | 7 cut(s) | 53, 2027, 2899, 3531, 3621, 3729, 3730 |
| ClaI | ATCGAT | 1 cut(s) | 1632 |
| CpoI | CGGWCCG | 1 cut(s) | 2027 |
| CseI | GACGC | 4 cut(s) | 847, 944, 2002, 3298 |
| Csp6I | GTAC | 9 cut(s) | 499, 602, 990, 1535, 2540, 3356, 3552, 3911, 3985 |
| CspI | CGGWCCG | 1 cut(s) | 2027 |
| CviQI | GTAC | 9 cut(s) | 499, 602, 990, 1535, 2540, 3356, 3552, 3911, 3985 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3880 |
| EaeI | YGGCCR | 3 cut(s) | 310, 2231, 3639 |
| EagI | CGGCCG | 1 cut(s) | 310 |
| Eam1104I | CTCTTC | 8 cut(s) | 110, 993, 1120, 1516, 1974, 2813, 3145, 3492 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3880 |
| EarI | CTCTTC | 8 cut(s) | 110, 993, 1120, 1516, 1974, 2813, 3145, 3492 |
| EciI | GGCGGA | 3 cut(s) | 70, 262, 521 |
| Ecl136II | GAGCTC | 1 cut(s) | 1862 |
| EclXI | CGGCCG | 1 cut(s) | 310 |
| Eco130I | CCWWGG | 7 cut(s) | 803, 993, 1398, 2197, 2274, 3311, 3636 |
| Eco147I | AGGCCT | 2 cut(s) | 1701, 2824 |
| Eco24I | GRGCYC | 3 cut(s) | 1864, 2120, 3733 |
| Eco31I | GGTCTC | 2 cut(s) | 107, 3129 |
| Eco32I | GATATC | 2 cut(s) | 889, 3369 |
| Eco47I | GGWCC | 5 cut(s) | 53, 2027, 2899, 3531, 3621 |
| Eco52I | CGGCCG | 1 cut(s) | 310 |
| Eco53kI | GAGCTC | 1 cut(s) | 1862 |
| Eco57I | CTGAAG | 7 cut(s) | 711, 1251, 1311, 1484, 2055, 3237, 3396 |
| EcoICRI | GAGCTC | 1 cut(s) | 1862 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3764 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2899, 3730 |
| EcoRI | GAATTC | 2 cut(s) | 387, 2208 |
| EcoRII | CCWGG | 7 cut(s) | 32, 1303, 2014, 2527, 3221, 3671, 3928 |
| EcoRV | GATATC | 2 cut(s) | 889, 3369 |
| EcoT14I | CCWWGG | 7 cut(s) | 803, 993, 1398, 2197, 2274, 3311, 3636 |
| EcoT22I | ATGCAT | 2 cut(s) | 1261, 2600 |
| EcoT38I | GRGCYC | 3 cut(s) | 1864, 2120, 3733 |
| ErhI | CCWWGG | 7 cut(s) | 803, 993, 1398, 2197, 2274, 3311, 3636 |
| Esp3I | CGTCTC | 4 cut(s) | 136, 830, 1038, 1551 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1205, 1237, 1284, 1316, 3010, 3042, 3756, 3788 |
| FaqI | GGGAC | 3 cut(s) | 78, 1639, 2912 |
| FauI | CCCGC | 2 cut(s) | 254, 3720 |
| FbaI | TGATCA | 1 cut(s) | 3694 |
| FokI | GGATG | 9 cut(s) | 1013, 1118, 1352, 1929, 2038, 2348, 2770, 2836, 2854 |
| FriOI | GRGCYC | 3 cut(s) | 1864, 2120, 3733 |
| FspBI | CTAG | 8 cut(s) | 693, 753, 804, 1562, 2165, 2802, 2933, 3998 |
| GlaI | GCGC | 5 cut(s) | 874, 1847, 2012, 2745, 3771 |
| GsaI | CCCAGC | 1 cut(s) | 63 |
| GsuI | CTGGAG | 5 cut(s) | 140, 1326, 2436, 2498, 3402 |
| HaeII | RGCGCY | 1 cut(s) | 3773 |
| HaeIII | GGCC | 7 cut(s) | 312, 573, 1701, 2233, 2824, 3641, 3731 |
| HapII | CCGG | 9 cut(s) | 51, 99, 192, 480, 507, 1103, 1881, 2604, 2623 |
| HgaI | GACGC | 4 cut(s) | 847, 944, 2002, 3298 |
| HhaI | GCGC | 5 cut(s) | 875, 1848, 2013, 2746, 3772 |
| Hin1I | GRCGYC | 3 cut(s) | 839, 955, 2203 |
| Hin6I | GCGC | 5 cut(s) | 873, 1846, 2011, 2744, 3770 |
| HinP1I | GCGC | 5 cut(s) | 873, 1846, 2011, 2744, 3770 |
| HincII | GTYRAC | 1 cut(s) | 328 |
| HindII | GTYRAC | 1 cut(s) | 328 |
| HindIII | AAGCTT | 1 cut(s) | 3588 |
| HpaII | CCGG | 9 cut(s) | 51, 99, 192, 480, 507, 1103, 1881, 2604, 2623 |
| HphI | GGTGA | 8 cut(s) | 12, 272, 1091, 1762, 2478, 3059, 3204, 3911 |
| Hpy166II | GTNNAC | 7 cut(s) | 328, 485, 990, 1463, 3251, 3358, 3596 |
| Hpy8I | GTNNAC | 7 cut(s) | 328, 485, 990, 1463, 3251, 3358, 3596 |
| Hpy99I | CGWCG | 5 cut(s) | 143, 350, 353, 960, 2208 |
| HpyCH4IV | ACGT | 5 cut(s) | 797, 2203, 2798, 3304, 3720 |
| HpySE526I | ACGT | 5 cut(s) | 797, 2203, 2798, 3304, 3720 |
| Hsp92I | GRCGYC | 3 cut(s) | 839, 955, 2203 |
| HspAI | GCGC | 5 cut(s) | 873, 1846, 2011, 2744, 3770 |
| KflI | GGGWCCC | 1 cut(s) | 2899 |
| Kpn2I | TCCGGA | 1 cut(s) | 1880 |
| KroI | GCCGGC | 1 cut(s) | 506 |
| KroNI | GCCGGC | 1 cut(s) | 508 |
| Ksp22I | TGATCA | 1 cut(s) | 3694 |
| LguI | GCTCTTC | 1 cut(s) | 1974 |
| MaeI | CTAG | 8 cut(s) | 693, 753, 804, 1562, 2165, 2802, 2933, 3998 |
| MaeII | ACGT | 5 cut(s) | 797, 2203, 2798, 3304, 3720 |
| MbiI | CCGCTC | 1 cut(s) | 1043 |
| MflI | RGATCY | 5 cut(s) | 77, 449, 1411, 2491, 2860 |
| MhlI | GDGCHC | 8 cut(s) | 199, 1864, 2120, 2179, 2670, 2913, 3717, 3733 |
| MlsI | TGGCCA | 1 cut(s) | 2233 |
| MluI | ACGCGT | 1 cut(s) | 3290 |
| MluNI | TGGCCA | 1 cut(s) | 2233 |
| MlyI | GAGTC | 6 cut(s) | 1064, 2072, 3149, 3227, 3890, 4010 |
| MmeI | TCCRAC | 4 cut(s) | 206, 657, 938, 3355 |
| Mox20I | TGGCCA | 1 cut(s) | 2233 |
| Mph1103I | ATGCAT | 2 cut(s) | 1261, 2600 |
| MroI | TCCGGA | 1 cut(s) | 1880 |
| MroNI | GCCGGC | 1 cut(s) | 506 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1114, 1158, 1873, 3306, 3975 |
| MscI | TGGCCA | 1 cut(s) | 2233 |
| MseI | TTAA | 9 cut(s) | 360, 576, 597, 1223, 1422, 2364, 2451, 2793, 2831 |
| MslI | CAYNNNNRTG | 7 cut(s) | 312, 561, 933, 1104, 1686, 1982, 2376 |
| Msp20I | TGGCCA | 1 cut(s) | 2233 |
| MspA1I | CMGCKG | 4 cut(s) | 1592, 2003, 3916, 3962 |
| MspCI | CTTAAG | 1 cut(s) | 1222 |
| MspI | CCGG | 9 cut(s) | 51, 99, 192, 480, 507, 1103, 1881, 2604, 2623 |
| Mva1269I | GAATGC | 2 cut(s) | 1660, 3342 |
| MvaI | CCWGG | 7 cut(s) | 34, 1305, 2016, 2529, 3223, 3673, 3930 |
| MvnI | CGCG | 5 cut(s) | 249, 537, 2011, 3292, 3827 |
| NaeI | GCCGGC | 1 cut(s) | 508 |
| NciI | CCSGG | 4 cut(s) | 51, 192, 1103, 2605 |
| NcoI | CCATGG | 3 cut(s) | 993, 1398, 2274 |
| NgoMIV | GCCGGC | 1 cut(s) | 506 |
| NmeAIII | GCCGAG | 1 cut(s) | 3207 |
| NmuCI | GTSAC | 6 cut(s) | 211, 793, 1379, 2369, 3210, 3955 |
| NsiI | ATGCAT | 2 cut(s) | 1261, 2600 |
| NspI | RCATGY | 2 cut(s) | 983, 2744 |
| OliI | CACNNNNGTG | 2 cut(s) | 312, 1982 |
| PceI | AGGCCT | 2 cut(s) | 1701, 2824 |
| PciSI | GCTCTTC | 1 cut(s) | 1974 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 81, 216, 310, 470, 845, 2209 |
| PctI | GAATGC | 2 cut(s) | 1660, 3342 |
| PdiI | GCCGGC | 1 cut(s) | 508 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1114, 1158, 1873, 3306, 3975 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1016, 3200 |
| PfoI | TCCNGGA | 1 cut(s) | 1303 |
| PleI | GAGTC | 6 cut(s) | 1064, 2072, 3149, 3227, 3889, 4010 |
| PpsI | GAGTC | 6 cut(s) | 1064, 2072, 3149, 3227, 3889, 4010 |
| PpuMI | RGGWCCY | 1 cut(s) | 2899 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1155 |
| Psp124BI | GAGCTC | 1 cut(s) | 1864 |
| Psp5II | RGGWCCY | 1 cut(s) | 2899 |
| Psp6I | CCWGG | 7 cut(s) | 32, 1303, 2014, 2527, 3221, 3671, 3928 |
| PspFI | CCCAGC | 1 cut(s) | 59 |
| PspGI | CCWGG | 7 cut(s) | 32, 1303, 2014, 2527, 3221, 3671, 3928 |
| PspOMI | GGGCCC | 1 cut(s) | 3729 |
| PspPI | GGNCC | 7 cut(s) | 53, 2027, 2899, 3531, 3621, 3729, 3730 |
| PspPPI | RGGWCCY | 1 cut(s) | 2899 |
| PstI | CTGCAG | 1 cut(s) | 1591 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3038, 3164 |
| PsuI | RGATCY | 5 cut(s) | 77, 449, 1411, 2491, 2860 |
| PvuII | CAGCTG | 2 cut(s) | 1592, 2003 |
| RsaI | GTAC | 9 cut(s) | 500, 603, 991, 1536, 2541, 3357, 3553, 3912, 3986 |
| RsaNI | GTAC | 9 cut(s) | 499, 602, 990, 1535, 2540, 3356, 3552, 3911, 3985 |
| RseI | CAYNNNNRTG | 7 cut(s) | 312, 561, 933, 1104, 1686, 1982, 2376 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2027 |
| RsrII | CGGWCCG | 1 cut(s) | 2027 |
| SacI | GAGCTC | 1 cut(s) | 1864 |
| SapI | GCTCTTC | 1 cut(s) | 1974 |
| SaqAI | TTAA | 9 cut(s) | 360, 576, 597, 1223, 1422, 2364, 2451, 2793, 2831 |
| Sau96I | GGNCC | 7 cut(s) | 53, 2027, 2899, 3531, 3621, 3729, 3730 |
| SchI | GAGTC | 6 cut(s) | 1064, 2072, 3149, 3227, 3890, 4010 |
| SduI | GDGCHC | 8 cut(s) | 199, 1864, 2120, 2179, 2670, 2913, 3717, 3733 |
| SfcI | CTRYAG | 5 cut(s) | 1119, 1587, 1917, 2142, 2904 |
| SinI | GGWCC | 5 cut(s) | 53, 2027, 2899, 3531, 3621 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 312, 561, 933, 1104, 1686, 1982, 2376 |
| SmlI | CTYRAG | 3 cut(s) | 1222, 1330, 3084 |
| SmoI | CTYRAG | 3 cut(s) | 1222, 1330, 3084 |
| SpeI | ACTAGT | 1 cut(s) | 2164 |
| SseBI | AGGCCT | 2 cut(s) | 1701, 2824 |
| SspMI | CTAG | 8 cut(s) | 693, 753, 804, 1562, 2165, 2802, 2933, 3998 |
| SstI | GAGCTC | 1 cut(s) | 1864 |
| StuI | AGGCCT | 2 cut(s) | 1701, 2824 |
| StyI | CCWWGG | 7 cut(s) | 803, 993, 1398, 2197, 2274, 3311, 3636 |
| TaiI | ACGT | 5 cut(s) | 800, 2206, 2801, 3307, 3723 |
| TaqI | TCGA | 9 cut(s) | 11, 141, 848, 933, 1369, 1632, 2206, 2212, 3492 |
| TaqII | GACCGA | 2 cut(s) | 3548, 3638 |
| TatI | WGTACW | 2 cut(s) | 2539, 3355 |
| TauI | GCSGC | 3 cut(s) | 537, 734, 3644 |
| Tru1I | TTAA | 9 cut(s) | 360, 576, 597, 1223, 1422, 2364, 2451, 2793, 2831 |
| Tru9I | TTAA | 9 cut(s) | 360, 576, 597, 1223, 1422, 2364, 2451, 2793, 2831 |
| TscAI | CASTG | 5 cut(s) | 667, 1294, 2118, 2757, 3553 |
| TseFI | GTSAC | 6 cut(s) | 211, 793, 1379, 2369, 3210, 3955 |
| Tsp45I | GTSAC | 6 cut(s) | 211, 793, 1379, 2369, 3210, 3955 |
| TspRI | CASTG | 5 cut(s) | 667, 1294, 2118, 2757, 3553 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1016, 3200 |
| Vha464I | CTTAAG | 1 cut(s) | 1222 |
| VpaK11BI | GGWCC | 5 cut(s) | 53, 2027, 2899, 3531, 3621 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3764 |
| XapI | RAATTY | 7 cut(s) | 387, 1095, 1717, 2208, 2396, 2523, 3379 |
| XceI | RCATGY | 2 cut(s) | 983, 2744 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 30 |
| XmaJI | CCTAGG | 1 cut(s) | 803 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1114, 1158, 1873, 3306, 3975 |
| XspI | CTAG | 8 cut(s) | 693, 753, 804, 1562, 2165, 2802, 2933, 3998 |
| ZraI | GACGTC | 1 cut(s) | 2204 |
| Zsp2I | ATGCAT | 2 cut(s) | 1261, 2600 |