WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G33530 AT3G33530 AT3G33530 AT3G33530 AT3G33530 |
| fragaria_vesca | FvH4_1g02820 FvH4_1g02820 FvH4_1g02820 FvH4_1g02820 |
| malus_domestica | MD02G1028100.v1.1 MD15G1169800.v1.1 |
| prunus_persica | Prupe.7G246700_v2.0.a1 |
| pyrus_communis | pycom02g02310 pycom15g15140 |
| rosa_chinensis | RchiOBHm_Chr2g0087941 |
| rosa_laevigata | RLG00000015913 |
| rosa_multiflora | Rmu_sc0013931.1_g000009 Rmu_sc0014136.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00153110 |
| rosa_rugosa | Rorug01G0479800 Rorug01G0479900 |
| rosa_samantha | Rh2AG034600 Rh2BG033600 Rh2CG034600 Rh2DG034300 |
| rosa_wichuraiana | Rw2G002700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2080 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3580 |
| AatII | GACGTC | 2 cut(s) | 35, 108 |
| Acc36I | ACCTGC | 1 cut(s) | 2080 |
| Acc65I | GGTACC | 1 cut(s) | 1929 |
| AccB1I | GGYRCC | 3 cut(s) | 25, 1023, 1929 |
| AccBSI | CCGCTC | 2 cut(s) | 168, 811 |
| AccII | CGCG | 3 cut(s) | 303, 572, 600 |
| AccIII | TCCGGA | 2 cut(s) | 506, 2427 |
| AclWI | GGATC | 9 cut(s) | 90, 103, 596, 962, 975, 2163, 2176, 2618, 2910 |
| AcoI | YGGCCR | 6 cut(s) | 298, 345, 544, 753, 1122, 2242 |
| AcsI | RAATTY | 2 cut(s) | 1759, 2545 |
| AcuI | CTGAAG | 9 cut(s) | 689, 755, 1332, 1341, 1392, 1526, 1539, 2245, 3120 |
| AcyI | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1024 |
| AdeI | CACNNNGTG | 1 cut(s) | 856 |
| AflII | CTTAAG | 1 cut(s) | 1517 |
| AgsI | TTSAA | 5 cut(s) | 1062, 1485, 1593, 3314, 3536 |
| AjiI | CACGTC | 2 cut(s) | 246, 780 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2260, 2292 |
| AleI | CACNNNNGTG | 1 cut(s) | 1373 |
| Alw21I | GWGCWC | 4 cut(s) | 779, 1050, 1894, 2221 |
| Alw26I | GTCTC | 7 cut(s) | 190, 668, 899, 2296, 2454, 3171, 3531 |
| Alw44I | GTGCAC | 2 cut(s) | 1046, 1890 |
| AlwI | GGATC | 9 cut(s) | 90, 103, 596, 962, 975, 2163, 2176, 2618, 2910 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3257 |
| Ama87I | CYCGRG | 1 cut(s) | 933 |
| Aor13HI | TCCGGA | 2 cut(s) | 506, 2427 |
| ApaLI | GTGCAC | 2 cut(s) | 1046, 1890 |
| ApoI | RAATTY | 2 cut(s) | 1759, 2545 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3348 |
| Asp718I | GGTACC | 1 cut(s) | 1929 |
| AspA2I | CCTAGG | 1 cut(s) | 872 |
| AspLEI | GCGC | 3 cut(s) | 28, 574, 1026 |
| AsuC2I | CCSGG | 4 cut(s) | 772, 934, 935, 2880 |
| AsuHPI | GGTGA | 8 cut(s) | 12, 259, 652, 2436, 2861, 2951, 3052, 3101 |
| AsuNHI | GCTAGC | 1 cut(s) | 1570 |
| AvaI | CYCGRG | 1 cut(s) | 933 |
| AvaII | GGWCC | 6 cut(s) | 282, 403, 454, 466, 714, 748 |
| AvrII | CCTAGG | 1 cut(s) | 872 |
| BaeGI | GKGCMC | 2 cut(s) | 1050, 1894 |
| BalI | TGGCCA | 1 cut(s) | 1124 |
| BamHI | GGATCC | 3 cut(s) | 95, 967, 2168 |
| BanI | GGYRCC | 3 cut(s) | 25, 1023, 1929 |
| BanII | GRGCYC | 2 cut(s) | 11, 2162 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1524, 1556 |
| BauI | CACGAG | 2 cut(s) | 3359, 3401 |
| BbsI | GAAGAC | 1 cut(s) | 1329 |
| Bbv12I | GWGCWC | 4 cut(s) | 779, 1050, 1894, 2221 |
| BceAI | ACGGC | 3 cut(s) | 431, 1184, 1593 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 73, 107 |
| BciVI | GTATCC | 1 cut(s) | 2435 |
| BclI | TGATCA | 1 cut(s) | 1174 |
| BcnI | CCSGG | 4 cut(s) | 772, 934, 935, 2880 |
| BcoDI | GTCTC | 7 cut(s) | 190, 668, 899, 2296, 2454, 3171, 3531 |
| BfaI | CTAG | 6 cut(s) | 873, 1571, 1764, 2006, 2109, 3368 |
| BfmI | CTRYAG | 3 cut(s) | 1404, 3432, 3612 |
| BfoI | RGCGCY | 2 cut(s) | 29, 1027 |
| BfrI | CTTAAG | 1 cut(s) | 1517 |
| BfuAI | ACCTGC | 1 cut(s) | 2080 |
| BfuI | GTATCC | 1 cut(s) | 2435 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 117 |
| BglII | AGATCT | 1 cut(s) | 2720 |
| BlnI | CCTAGG | 1 cut(s) | 872 |
| BlpI | GCTNAGC | 1 cut(s) | 2076 |
| BmcAI | AGTACT | 2 cut(s) | 1018, 2848 |
| Bme18I | GGWCC | 6 cut(s) | 282, 403, 454, 466, 714, 748 |
| BmeT110I | CYCGRG | 1 cut(s) | 933 |
| BmgBI | CACGTC | 2 cut(s) | 246, 780 |
| BmrI | ACTGGG | 1 cut(s) | 2397 |
| BmsI | GCATC | 8 cut(s) | 378, 600, 1942, 2123, 2150, 3200, 3202, 3265 |
| BmtI | GCTAGC | 1 cut(s) | 1574 |
| BmuI | ACTGGG | 1 cut(s) | 2397 |
| BpiI | GAAGAC | 1 cut(s) | 1329 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 569, 601 |
| BpmI | CTGGAG | 4 cut(s) | 761, 1827, 2478, 2667 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3296 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2076 |
| BpuEI | CTTGAG | 1 cut(s) | 377 |
| BpuMI | CCSGG | 4 cut(s) | 772, 934, 935, 2880 |
| BsaAI | YACGTR | 1 cut(s) | 3494 |
| BsaHI | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1024 |
| BsaI | GGTCTC | 1 cut(s) | 2454 |
| BsaWI | WCCGGW | 3 cut(s) | 276, 506, 2427 |
| Bse118I | RCCGGY | 5 cut(s) | 22, 137, 350, 400, 542 |
| Bse3DI | GCAATG | 4 cut(s) | 848, 926, 1468, 2322 |
| BseAI | TCCGGA | 2 cut(s) | 506, 2427 |
| BseGI | GGATG | 7 cut(s) | 591, 961, 1342, 1357, 2126, 2383, 3013 |
| BseMI | GCAATG | 4 cut(s) | 848, 926, 1468, 2322 |
| BseMII | CTCAG | 6 cut(s) | 309, 1802, 2175, 3215, 3310, 3453 |
| BseSI | GKGCMC | 2 cut(s) | 1050, 1894 |
| BseX3I | CGGCCG | 2 cut(s) | 298, 544 |
| BseYI | CCCAGC | 3 cut(s) | 51, 77, 462 |
| BsgI | GTGCAG | 1 cut(s) | 3516 |
| Bsh1236I | CGCG | 3 cut(s) | 303, 572, 600 |
| Bsh1285I | CGRYCG | 4 cut(s) | 301, 358, 547, 3417 |
| BshNI | GGYRCC | 3 cut(s) | 25, 1023, 1929 |
| BsiEI | CGRYCG | 4 cut(s) | 301, 358, 547, 3417 |
| BsiHKAI | GWGCWC | 4 cut(s) | 779, 1050, 1894, 2221 |
| BsiHKCI | CYCGRG | 1 cut(s) | 933 |
| BslFI | GGGAC | 7 cut(s) | 68, 761, 1082, 1744, 2137, 2363, 2727 |
| BsmAI | GTCTC | 7 cut(s) | 190, 668, 899, 2296, 2454, 3171, 3531 |
| BsmBI | CGTCTC | 3 cut(s) | 190, 668, 899 |
| BsmFI | GGGAC | 7 cut(s) | 68, 761, 1082, 1744, 2137, 2363, 2727 |
| BsmI | GAATGC | 3 cut(s) | 128, 725, 2392 |
| Bso31I | GGTCTC | 1 cut(s) | 2454 |
| BsoBI | CYCGRG | 1 cut(s) | 933 |
| Bsp1286I | GDGCHC | 6 cut(s) | 11, 779, 1050, 1894, 2162, 2221 |
| Bsp13I | TCCGGA | 2 cut(s) | 506, 2427 |
| Bsp1407I | TGTACA | 1 cut(s) | 3397 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2076 |
| Bsp19I | CCATGG | 1 cut(s) | 3353 |
| BspCNI | CTCAG | 6 cut(s) | 310, 1801, 2174, 3216, 3309, 3454 |
| BspEI | TCCGGA | 2 cut(s) | 506, 2427 |
| BspFNI | CGCG | 3 cut(s) | 303, 572, 600 |
| BspMAI | CTGCAG | 1 cut(s) | 3436 |
| BspMI | ACCTGC | 1 cut(s) | 2080 |
| BspOI | GCTAGC | 1 cut(s) | 1574 |
| BspPI | GGATC | 9 cut(s) | 90, 103, 596, 962, 975, 2163, 2176, 2618, 2910 |
| BspT107I | GGYRCC | 3 cut(s) | 25, 1023, 1929 |
| BspTI | CTTAAG | 1 cut(s) | 1517 |
| BspTNI | GGTCTC | 1 cut(s) | 2454 |
| BsrBI | CCGCTC | 2 cut(s) | 168, 811 |
| BsrDI | GCAATG | 4 cut(s) | 848, 926, 1468, 2322 |
| BsrFI | RCCGGY | 5 cut(s) | 22, 137, 350, 400, 542 |
| BsrGI | TGTACA | 1 cut(s) | 3397 |
| BssAI | RCCGGY | 5 cut(s) | 22, 137, 350, 400, 542 |
| BssNI | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1024 |
| BssSI | CACGAG | 2 cut(s) | 3359, 3401 |
| BssT1I | CCWWGG | 4 cut(s) | 872, 1650, 3286, 3353 |
| Bst2BI | CACGAG | 2 cut(s) | 3359, 3401 |
| Bst6I | CTCTTC | 5 cut(s) | 1062, 2855, 3256, 3372, 3534 |
| BstACI | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1024 |
| BstAFI | CTTAAG | 1 cut(s) | 1517 |
| BstAUI | TGTACA | 1 cut(s) | 3397 |
| BstBAI | YACGTR | 1 cut(s) | 3494 |
| BstC8I | GCNNGC | 4 cut(s) | 62, 139, 352, 1572 |
| BstDSI | CCRYGG | 3 cut(s) | 1200, 1609, 3353 |
| BstEII | GGTNACC | 1 cut(s) | 2939 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1924 |
| BstF5I | GGATG | 7 cut(s) | 591, 961, 1342, 1357, 2126, 2383, 3013 |
| BstFNI | CGCG | 3 cut(s) | 303, 572, 600 |
| BstH2I | RGCGCY | 2 cut(s) | 29, 1027 |
| BstHHI | GCGC | 3 cut(s) | 28, 574, 1026 |
| BstMAI | GTCTC | 7 cut(s) | 190, 668, 899, 2296, 2454, 3171, 3531 |
| BstMCI | CGRYCG | 4 cut(s) | 301, 358, 547, 3417 |
| BstNSI | RCATGY | 2 cut(s) | 64, 2786 |
| BstPI | GGTNACC | 1 cut(s) | 2939 |
| BstSFI | CTRYAG | 3 cut(s) | 1404, 3432, 3612 |
| BstSLI | GKGCMC | 2 cut(s) | 1050, 1894 |
| BstUI | CGCG | 3 cut(s) | 303, 572, 600 |
| BstV2I | GAAGAC | 1 cut(s) | 1329 |
| BstX2I | RGATCY | 5 cut(s) | 95, 967, 2168, 2720, 2902 |
| BstYI | RGATCY | 5 cut(s) | 95, 967, 2168, 2720, 2902 |
| BstZI | CGGCCG | 2 cut(s) | 298, 544 |
| BsuI | GTATCC | 1 cut(s) | 2435 |
| BtgI | CCRYGG | 3 cut(s) | 1200, 1609, 3353 |
| BtgZI | GCGATG | 1 cut(s) | 355 |
| BtrI | CACGTC | 2 cut(s) | 246, 780 |
| BtsCI | GGATG | 7 cut(s) | 591, 961, 1342, 1357, 2126, 2383, 3013 |
| BtsI | GCAGTG | 2 cut(s) | 730, 1566 |
| BtsIMutI | CAGTG | 7 cut(s) | 315, 730, 1368, 1566, 2627, 2902, 3180 |
| BveI | ACCTGC | 1 cut(s) | 2080 |
| Cac8I | GCNNGC | 4 cut(s) | 62, 139, 352, 1572 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3257 |
| CfoI | GCGC | 3 cut(s) | 28, 574, 1026 |
| Cfr10I | RCCGGY | 5 cut(s) | 22, 137, 350, 400, 542 |
| Cfr9I | CCCGGG | 1 cut(s) | 933 |
| CpoI | CGGWCCG | 1 cut(s) | 714 |
| CseI | GACGC | 3 cut(s) | 575, 616, 916 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2616, 2651 |
| CspI | CGGWCCG | 1 cut(s) | 714 |
| DinI | GGCGCC | 2 cut(s) | 27, 1025 |
| DraIII | CACNNNGTG | 1 cut(s) | 856 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3580 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3580 |
| EaeI | YGGCCR | 6 cut(s) | 298, 345, 544, 753, 1122, 2242 |
| EagI | CGGCCG | 2 cut(s) | 298, 544 |
| Eam1104I | CTCTTC | 5 cut(s) | 1062, 2855, 3256, 3372, 3534 |
| EarI | CTCTTC | 5 cut(s) | 1062, 2855, 3256, 3372, 3534 |
| EciI | GGCGGA | 4 cut(s) | 88, 217, 377, 584 |
| EclXI | CGGCCG | 2 cut(s) | 298, 544 |
| Eco130I | CCWWGG | 4 cut(s) | 872, 1650, 3286, 3353 |
| Eco147I | AGGCCT | 1 cut(s) | 2866 |
| Eco24I | GRGCYC | 2 cut(s) | 11, 2162 |
| Eco31I | GGTCTC | 1 cut(s) | 2454 |
| Eco47I | GGWCC | 6 cut(s) | 282, 403, 454, 466, 714, 748 |
| Eco52I | CGGCCG | 2 cut(s) | 298, 544 |
| Eco57I | CTGAAG | 9 cut(s) | 689, 755, 1332, 1341, 1392, 1526, 1539, 2245, 3120 |
| Eco88I | CYCGRG | 1 cut(s) | 933 |
| Eco91I | GGTNACC | 1 cut(s) | 2939 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1924 |
| EcoO109I | RGGNCCY | 3 cut(s) | 454, 748, 1316 |
| EcoO65I | GGTNACC | 1 cut(s) | 2939 |
| EcoRI | GAATTC | 1 cut(s) | 2545 |
| EcoT14I | CCWWGG | 4 cut(s) | 872, 1650, 3286, 3353 |
| EcoT22I | ATGCAT | 1 cut(s) | 2143 |
| EcoT38I | GRGCYC | 2 cut(s) | 11, 2162 |
| EgeI | GGCGCC | 2 cut(s) | 27, 1025 |
| EheI | GGCGCC | 2 cut(s) | 27, 1025 |
| ErhI | CCWWGG | 4 cut(s) | 872, 1650, 3286, 3353 |
| Esp3I | CGTCTC | 3 cut(s) | 190, 668, 899 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1465, 1497, 1511, 1543, 1900, 1932 |
| FaqI | GGGAC | 7 cut(s) | 68, 761, 1082, 1744, 2137, 2363, 2727 |
| FauI | CCCGC | 5 cut(s) | 142, 173, 446, 623, 816 |
| FbaI | TGATCA | 1 cut(s) | 1174 |
| FokI | GGATG | 7 cut(s) | 578, 968, 1349, 1364, 2113, 2390, 3020 |
| FriOI | GRGCYC | 2 cut(s) | 11, 2162 |
| FspBI | CTAG | 6 cut(s) | 873, 1571, 1764, 2006, 2109, 3368 |
| GlaI | GCGC | 3 cut(s) | 27, 573, 1025 |
| GsaI | CCCAGC | 3 cut(s) | 55, 81, 466 |
| GsuI | CTGGAG | 4 cut(s) | 761, 1827, 2478, 2667 |
| HaeII | RGCGCY | 2 cut(s) | 29, 1027 |
| HgaI | GACGC | 3 cut(s) | 575, 616, 916 |
| HhaI | GCGC | 3 cut(s) | 28, 574, 1026 |
| Hin1I | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1024 |
| Hin6I | GCGC | 3 cut(s) | 26, 572, 1024 |
| HinP1I | GCGC | 3 cut(s) | 26, 572, 1024 |
| HindIII | AAGCTT | 1 cut(s) | 2191 |
| HphI | GGTGA | 8 cut(s) | 12, 259, 652, 2436, 2861, 2951, 3052, 3101 |
| Hpy166II | GTNNAC | 8 cut(s) | 36, 282, 1048, 1892, 3043, 3344, 3398, 3400 |
| Hpy8I | GTNNAC | 8 cut(s) | 36, 282, 1048, 1892, 3043, 3344, 3398, 3400 |
| HpyCH4IV | ACGT | 9 cut(s) | 32, 105, 245, 779, 816, 866, 1888, 3346, 3493 |
| HpySE526I | ACGT | 9 cut(s) | 32, 105, 245, 779, 816, 866, 1888, 3346, 3493 |
| Hsp92I | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1024 |
| HspAI | GCGC | 3 cut(s) | 26, 572, 1024 |
| KasI | GGCGCC | 2 cut(s) | 25, 1023 |
| Kpn2I | TCCGGA | 2 cut(s) | 506, 2427 |
| KpnI | GGTACC | 1 cut(s) | 1933 |
| KroI | GCCGGC | 2 cut(s) | 137, 350 |
| KroNI | GCCGGC | 2 cut(s) | 139, 352 |
| Ksp22I | TGATCA | 1 cut(s) | 1174 |
| LmnI | GCTCC | 7 cut(s) | 69, 149, 335, 774, 877, 1950, 2648 |
| LweI | GCATC | 8 cut(s) | 378, 600, 1942, 2123, 2150, 3200, 3202, 3265 |
| MaeI | CTAG | 6 cut(s) | 873, 1571, 1764, 2006, 2109, 3368 |
| MaeII | ACGT | 9 cut(s) | 32, 105, 245, 779, 816, 866, 1888, 3346, 3493 |
| MbiI | CCGCTC | 2 cut(s) | 168, 811 |
| MfeI | CAATTG | 2 cut(s) | 1083, 2810 |
| MflI | RGATCY | 5 cut(s) | 95, 967, 2168, 2720, 2902 |
| MhlI | GDGCHC | 6 cut(s) | 11, 779, 1050, 1894, 2162, 2221 |
| MlsI | TGGCCA | 1 cut(s) | 1124 |
| MluNI | TGGCCA | 1 cut(s) | 1124 |
| Mly113I | GGCGCC | 2 cut(s) | 26, 1024 |
| MlyI | GAGTC | 7 cut(s) | 410, 476, 630, 774, 1978, 2029, 2519 |
| MmeI | TCCRAC | 2 cut(s) | 444, 613 |
| Mox20I | TGGCCA | 1 cut(s) | 1124 |
| Mph1103I | ATGCAT | 1 cut(s) | 2143 |
| MreI | CGCCGGCG | 1 cut(s) | 350 |
| MroI | TCCGGA | 2 cut(s) | 506, 2427 |
| MroNI | GCCGGC | 2 cut(s) | 137, 350 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3348 |
| MscI | TGGCCA | 1 cut(s) | 1124 |
| MseI | TTAA | 9 cut(s) | 1518, 1907, 2406, 2436, 2835, 2967, 3135, 3546, 3652 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1002, 1373 |
| Msp20I | TGGCCA | 1 cut(s) | 1124 |
| MspA1I | CMGCKG | 2 cut(s) | 549, 913 |
| MspCI | CTTAAG | 1 cut(s) | 1517 |
| MunI | CAATTG | 2 cut(s) | 1083, 2810 |
| Mva1269I | GAATGC | 3 cut(s) | 128, 725, 2392 |
| MvnI | CGCG | 3 cut(s) | 303, 572, 600 |
| NaeI | GCCGGC | 2 cut(s) | 139, 352 |
| NarI | GGCGCC | 2 cut(s) | 26, 1024 |
| NciI | CCSGG | 4 cut(s) | 772, 934, 935, 2880 |
| NcoI | CCATGG | 1 cut(s) | 3353 |
| NgoMIV | GCCGGC | 2 cut(s) | 137, 350 |
| NheI | GCTAGC | 1 cut(s) | 1570 |
| NmeAIII | GCCGAG | 1 cut(s) | 276 |
| NmuCI | GTSAC | 7 cut(s) | 265, 658, 1229, 1561, 1831, 2255, 2939 |
| NsiI | ATGCAT | 1 cut(s) | 2143 |
| NspI | RCATGY | 2 cut(s) | 64, 2786 |
| OliI | CACNNNNGTG | 1 cut(s) | 1373 |
| PaeI | GCATGC | 1 cut(s) | 64 |
| PaqCI | CACCTGC | 1 cut(s) | 2080 |
| PceI | AGGCCT | 1 cut(s) | 2866 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 99, 270, 378, 785 |
| PctI | GAATGC | 3 cut(s) | 128, 725, 2392 |
| PdiI | GCCGGC | 2 cut(s) | 139, 352 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3348 |
| PfoI | TCCNGGA | 4 cut(s) | 450, 2455, 2569, 2878 |
| PleI | GAGTC | 7 cut(s) | 410, 476, 630, 773, 1978, 2029, 2519 |
| PluTI | GGCGCC | 2 cut(s) | 29, 1027 |
| PpsI | GAGTC | 7 cut(s) | 410, 476, 630, 773, 1978, 2029, 2519 |
| Ppu21I | YACGTR | 1 cut(s) | 3494 |
| PpuMI | RGGWCCY | 2 cut(s) | 454, 748 |
| Psp5II | RGGWCCY | 2 cut(s) | 454, 748 |
| PspEI | GGTNACC | 1 cut(s) | 2939 |
| PspFI | CCCAGC | 3 cut(s) | 51, 77, 462 |
| PspPPI | RGGWCCY | 2 cut(s) | 454, 748 |
| PstI | CTGCAG | 1 cut(s) | 3436 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3257 |
| PsuI | RGATCY | 5 cut(s) | 95, 967, 2168, 2720, 2902 |
| PvuII | CAGCTG | 1 cut(s) | 913 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1002, 1373 |
| Rsr2I | CGGWCCG | 1 cut(s) | 714 |
| RsrII | CGGWCCG | 1 cut(s) | 714 |
| SaqAI | TTAA | 9 cut(s) | 1518, 1907, 2406, 2436, 2835, 2967, 3135, 3546, 3652 |
| ScaI | AGTACT | 2 cut(s) | 1018, 2848 |
| SchI | GAGTC | 7 cut(s) | 410, 476, 630, 774, 1978, 2029, 2519 |
| SduI | GDGCHC | 6 cut(s) | 11, 779, 1050, 1894, 2162, 2221 |
| SfaNI | GCATC | 8 cut(s) | 378, 600, 1942, 2123, 2150, 3200, 3202, 3265 |
| SfcI | CTRYAG | 3 cut(s) | 1404, 3432, 3612 |
| SfoI | GGCGCC | 2 cut(s) | 27, 1025 |
| SgrAI | CRCCGGYG | 2 cut(s) | 22, 350 |
| SinI | GGWCC | 6 cut(s) | 282, 403, 454, 466, 714, 748 |
| SmaI | CCCGGG | 1 cut(s) | 935 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1002, 1373 |
| SmlI | CTYRAG | 2 cut(s) | 392, 1517 |
| SmoI | CTYRAG | 2 cut(s) | 392, 1517 |
| SphI | GCATGC | 1 cut(s) | 64 |
| SseBI | AGGCCT | 1 cut(s) | 2866 |
| SspDI | GGCGCC | 2 cut(s) | 25, 1023 |
| SspI | AATATT | 1 cut(s) | 2365 |
| SspMI | CTAG | 6 cut(s) | 873, 1571, 1764, 2006, 2109, 3368 |
| StuI | AGGCCT | 1 cut(s) | 2866 |
| StyI | CCWWGG | 4 cut(s) | 872, 1650, 3286, 3353 |
| TaiI | ACGT | 9 cut(s) | 35, 108, 248, 782, 819, 869, 1891, 3349, 3496 |
| TaqI | TCGA | 7 cut(s) | 5, 159, 381, 414, 609, 1142, 2986 |
| TaqII | GACCGA | 2 cut(s) | 731, 3403 |
| TatI | WGTACW | 5 cut(s) | 1016, 1394, 2485, 2846, 3397 |
| Tru1I | TTAA | 9 cut(s) | 1518, 1907, 2406, 2436, 2835, 2967, 3135, 3546, 3652 |
| Tru9I | TTAA | 9 cut(s) | 1518, 1907, 2406, 2436, 2835, 2967, 3135, 3546, 3652 |
| TscAI | CASTG | 7 cut(s) | 322, 730, 1375, 1566, 2634, 2902, 3187 |
| TseFI | GTSAC | 7 cut(s) | 265, 658, 1229, 1561, 1831, 2255, 2939 |
| Tsp45I | GTSAC | 7 cut(s) | 265, 658, 1229, 1561, 1831, 2255, 2939 |
| TspDTI | ATGAA | 7 cut(s) | 1712, 1764, 1770, 2228, 2274, 2391, 3161 |
| TspGWI | ACGGA | 8 cut(s) | 142, 262, 594, 646, 692, 1937, 2500, 2729 |
| TspMI | CCCGGG | 1 cut(s) | 933 |
| TspRI | CASTG | 7 cut(s) | 322, 730, 1375, 1566, 2634, 2902, 3187 |
| Vha464I | CTTAAG | 1 cut(s) | 1517 |
| VneI | GTGCAC | 2 cut(s) | 1046, 1890 |
| VpaK11BI | GGWCC | 6 cut(s) | 282, 403, 454, 466, 714, 748 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1924 |
| XapI | RAATTY | 2 cut(s) | 1759, 2545 |
| XbaI | TCTAGA | 1 cut(s) | 1763 |
| XceI | RCATGY | 2 cut(s) | 64, 2786 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1965 |
| XmaI | CCCGGG | 1 cut(s) | 933 |
| XmaJI | CCTAGG | 1 cut(s) | 872 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3348 |
| XspI | CTAG | 6 cut(s) | 873, 1571, 1764, 2006, 2109, 3368 |
| ZraI | GACGTC | 2 cut(s) | 33, 106 |
| ZrmI | AGTACT | 2 cut(s) | 1018, 2848 |
| Zsp2I | ATGCAT | 1 cut(s) | 2143 |