WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G33530 AT3G33530 AT3G33530 AT3G33530 AT3G33530 |
| fragaria_vesca | FvH4_1g02820 FvH4_1g02820 FvH4_1g02820 FvH4_1g02820 |
| malus_domestica | MD02G1028100.v1.1 MD15G1169800.v1.1 |
| prunus_persica | Prupe.7G246700_v2.0.a1 |
| pyrus_communis | pycom02g02310 pycom15g15140 |
| rosa_chinensis | RchiOBHm_Chr2g0087941 |
| rosa_laevigata | RLG00000015913 |
| rosa_multiflora | Rmu_sc0013931.1_g000009 Rmu_sc0014136.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00153110 |
| rosa_rugosa | Rorug01G0479800 Rorug01G0479900 |
| rosa_samantha | Rh2AG034600 Rh2BG033600 Rh2CG034600 Rh2DG034300 |
| rosa_wichuraiana | Rw2G002700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2089 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3589 |
| AatII | GACGTC | 2 cut(s) | 35, 108 |
| Acc36I | ACCTGC | 1 cut(s) | 2089 |
| Acc65I | GGTACC | 1 cut(s) | 1938 |
| AccB1I | GGYRCC | 3 cut(s) | 25, 1032, 1938 |
| AccBSI | CCGCTC | 2 cut(s) | 168, 820 |
| AccII | CGCG | 4 cut(s) | 303, 572, 600, 3662 |
| AccIII | TCCGGA | 2 cut(s) | 506, 2436 |
| AcoI | YGGCCR | 6 cut(s) | 298, 345, 544, 753, 1131, 2251 |
| AcsI | RAATTY | 3 cut(s) | 1768, 2554, 3888 |
| AcuI | CTGAAG | 9 cut(s) | 689, 755, 1341, 1350, 1401, 1535, 1548, 2254, 3129 |
| AcyI | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1033 |
| AdeI | CACNNNGTG | 2 cut(s) | 865, 3836 |
| AflII | CTTAAG | 1 cut(s) | 1526 |
| AflIII | ACRYGT | 1 cut(s) | 3748 |
| AgsI | TTSAA | 6 cut(s) | 1071, 1494, 1602, 3323, 3545, 3706 |
| AjiI | CACGTC | 3 cut(s) | 246, 786, 3751 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2269, 2301 |
| AleI | CACNNNNGTG | 1 cut(s) | 1382 |
| Alw21I | GWGCWC | 4 cut(s) | 785, 1059, 1903, 2230 |
| Alw26I | GTCTC | 7 cut(s) | 190, 668, 908, 2305, 2463, 3180, 3540 |
| Alw44I | GTGCAC | 2 cut(s) | 1055, 1899 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3266, 3680 |
| Ama87I | CYCGRG | 1 cut(s) | 942 |
| Aor13HI | TCCGGA | 2 cut(s) | 506, 2436 |
| ApaLI | GTGCAC | 2 cut(s) | 1055, 1899 |
| ApoI | RAATTY | 3 cut(s) | 1768, 2554, 3888 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3357 |
| Asp718I | GGTACC | 1 cut(s) | 1938 |
| AspLEI | GCGC | 4 cut(s) | 28, 574, 1035, 1966 |
| AsuC2I | CCSGG | 4 cut(s) | 778, 943, 944, 2889 |
| AsuHPI | GGTGA | 9 cut(s) | 12, 259, 652, 2445, 2870, 2960, 3061, 3110, 4022 |
| AsuNHI | GCTAGC | 1 cut(s) | 1579 |
| AvaI | CYCGRG | 1 cut(s) | 942 |
| AvaII | GGWCC | 8 cut(s) | 282, 403, 454, 466, 714, 748, 3841, 3980 |
| BaeGI | GKGCMC | 2 cut(s) | 1059, 1903 |
| BalI | TGGCCA | 1 cut(s) | 1133 |
| BamHI | GGATCC | 3 cut(s) | 95, 976, 2177 |
| BanI | GGYRCC | 3 cut(s) | 25, 1032, 1938 |
| BanII | GRGCYC | 3 cut(s) | 11, 2171, 3784 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1533, 1565 |
| BauI | CACGAG | 2 cut(s) | 3368, 3410 |
| BbsI | GAAGAC | 1 cut(s) | 1338 |
| Bbv12I | GWGCWC | 4 cut(s) | 785, 1059, 1903, 2230 |
| BceAI | ACGGC | 3 cut(s) | 431, 1193, 1602 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 73, 107 |
| BciVI | GTATCC | 1 cut(s) | 2444 |
| BclI | TGATCA | 1 cut(s) | 1183 |
| BcnI | CCSGG | 4 cut(s) | 778, 943, 944, 2889 |
| BcoDI | GTCTC | 7 cut(s) | 190, 668, 908, 2305, 2463, 3180, 3540 |
| BfaI | CTAG | 5 cut(s) | 1580, 1773, 2015, 2118, 3377 |
| BfmI | CTRYAG | 3 cut(s) | 1413, 3441, 3621 |
| BfoI | RGCGCY | 2 cut(s) | 29, 1036 |
| BfrI | CTTAAG | 1 cut(s) | 1526 |
| BfuAI | ACCTGC | 1 cut(s) | 2089 |
| BfuI | GTATCC | 1 cut(s) | 2444 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 117 |
| BglII | AGATCT | 1 cut(s) | 2729 |
| BlpI | GCTNAGC | 1 cut(s) | 2085 |
| BmcAI | AGTACT | 1 cut(s) | 1027 |
| Bme18I | GGWCC | 8 cut(s) | 282, 403, 454, 466, 714, 748, 3841, 3980 |
| BmeT110I | CYCGRG | 1 cut(s) | 942 |
| BmgBI | CACGTC | 3 cut(s) | 246, 786, 3751 |
| BmrI | ACTGGG | 2 cut(s) | 2406, 3643 |
| BmtI | GCTAGC | 1 cut(s) | 1583 |
| BmuI | ACTGGG | 2 cut(s) | 2406, 3643 |
| BpiI | GAAGAC | 1 cut(s) | 1338 |
| BpmI | CTGGAG | 5 cut(s) | 761, 1449, 1836, 2487, 2676 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3305 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2085 |
| BpuEI | CTTGAG | 1 cut(s) | 377 |
| BpuMI | CCSGG | 4 cut(s) | 778, 943, 944, 2889 |
| BsaAI | YACGTR | 1 cut(s) | 3503 |
| BsaHI | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1033 |
| BsaI | GGTCTC | 1 cut(s) | 2463 |
| BsaWI | WCCGGW | 3 cut(s) | 276, 506, 2436 |
| Bse118I | RCCGGY | 5 cut(s) | 22, 137, 350, 400, 542 |
| Bse3DI | GCAATG | 5 cut(s) | 857, 935, 1477, 2331, 3816 |
| BseAI | TCCGGA | 2 cut(s) | 506, 2436 |
| BseGI | GGATG | 7 cut(s) | 591, 970, 1351, 1366, 2135, 2392, 3022 |
| BseMI | GCAATG | 5 cut(s) | 857, 935, 1477, 2331, 3816 |
| BseMII | CTCAG | 6 cut(s) | 309, 1811, 2184, 3224, 3319, 3462 |
| BseSI | GKGCMC | 2 cut(s) | 1059, 1903 |
| BseX3I | CGGCCG | 2 cut(s) | 298, 544 |
| BseYI | CCCAGC | 3 cut(s) | 51, 77, 462 |
| BsgI | GTGCAG | 2 cut(s) | 3525, 3729 |
| Bsh1236I | CGCG | 4 cut(s) | 303, 572, 600, 3662 |
| Bsh1285I | CGRYCG | 4 cut(s) | 301, 358, 547, 3426 |
| BshNI | GGYRCC | 3 cut(s) | 25, 1032, 1938 |
| BsiEI | CGRYCG | 4 cut(s) | 301, 358, 547, 3426 |
| BsiHKAI | GWGCWC | 4 cut(s) | 785, 1059, 1903, 2230 |
| BsiHKCI | CYCGRG | 1 cut(s) | 942 |
| BslFI | GGGAC | 8 cut(s) | 68, 761, 1091, 1753, 2146, 2372, 2736, 3993 |
| BsmAI | GTCTC | 7 cut(s) | 190, 668, 908, 2305, 2463, 3180, 3540 |
| BsmBI | CGTCTC | 3 cut(s) | 190, 668, 908 |
| BsmFI | GGGAC | 8 cut(s) | 68, 761, 1091, 1753, 2146, 2372, 2736, 3993 |
| BsmI | GAATGC | 3 cut(s) | 128, 725, 2401 |
| Bso31I | GGTCTC | 1 cut(s) | 2463 |
| BsoBI | CYCGRG | 1 cut(s) | 942 |
| Bsp1286I | GDGCHC | 7 cut(s) | 11, 785, 1059, 1903, 2171, 2230, 3784 |
| Bsp13I | TCCGGA | 2 cut(s) | 506, 2436 |
| Bsp1407I | TGTACA | 1 cut(s) | 3406 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2085 |
| Bsp19I | CCATGG | 1 cut(s) | 3362 |
| BspCNI | CTCAG | 6 cut(s) | 310, 1810, 2183, 3225, 3318, 3463 |
| BspEI | TCCGGA | 2 cut(s) | 506, 2436 |
| BspFNI | CGCG | 4 cut(s) | 303, 572, 600, 3662 |
| BspMAI | CTGCAG | 1 cut(s) | 3445 |
| BspMI | ACCTGC | 1 cut(s) | 2089 |
| BspOI | GCTAGC | 1 cut(s) | 1583 |
| BspT107I | GGYRCC | 3 cut(s) | 25, 1032, 1938 |
| BspTI | CTTAAG | 1 cut(s) | 1526 |
| BspTNI | GGTCTC | 1 cut(s) | 2463 |
| BsrBI | CCGCTC | 2 cut(s) | 168, 820 |
| BsrDI | GCAATG | 5 cut(s) | 857, 935, 1477, 2331, 3816 |
| BsrFI | RCCGGY | 5 cut(s) | 22, 137, 350, 400, 542 |
| BsrGI | TGTACA | 1 cut(s) | 3406 |
| BssAI | RCCGGY | 5 cut(s) | 22, 137, 350, 400, 542 |
| BssNI | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1033 |
| BssSI | CACGAG | 2 cut(s) | 3368, 3410 |
| BssT1I | CCWWGG | 3 cut(s) | 1659, 3295, 3362 |
| Bst2BI | CACGAG | 2 cut(s) | 3368, 3410 |
| Bst6I | CTCTTC | 6 cut(s) | 541, 1071, 2864, 3265, 3381, 3543 |
| BstACI | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1033 |
| BstAFI | CTTAAG | 1 cut(s) | 1526 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3806 |
| BstAUI | TGTACA | 1 cut(s) | 3406 |
| BstBAI | YACGTR | 1 cut(s) | 3503 |
| BstC8I | GCNNGC | 5 cut(s) | 62, 139, 352, 1581, 3880 |
| BstDSI | CCRYGG | 3 cut(s) | 1209, 1618, 3362 |
| BstEII | GGTNACC | 1 cut(s) | 2948 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1933 |
| BstF5I | GGATG | 7 cut(s) | 591, 970, 1351, 1366, 2135, 2392, 3022 |
| BstFNI | CGCG | 4 cut(s) | 303, 572, 600, 3662 |
| BstH2I | RGCGCY | 2 cut(s) | 29, 1036 |
| BstHHI | GCGC | 4 cut(s) | 28, 574, 1035, 1966 |
| BstMAI | GTCTC | 7 cut(s) | 190, 668, 908, 2305, 2463, 3180, 3540 |
| BstMCI | CGRYCG | 4 cut(s) | 301, 358, 547, 3426 |
| BstNSI | RCATGY | 2 cut(s) | 64, 2795 |
| BstPI | GGTNACC | 1 cut(s) | 2948 |
| BstSFI | CTRYAG | 3 cut(s) | 1413, 3441, 3621 |
| BstSLI | GKGCMC | 2 cut(s) | 1059, 1903 |
| BstUI | CGCG | 4 cut(s) | 303, 572, 600, 3662 |
| BstV2I | GAAGAC | 1 cut(s) | 1338 |
| BstX2I | RGATCY | 6 cut(s) | 95, 976, 2177, 2729, 2911, 3710 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 889 |
| BstYI | RGATCY | 6 cut(s) | 95, 976, 2177, 2729, 2911, 3710 |
| BstZI | CGGCCG | 2 cut(s) | 298, 544 |
| BsuI | GTATCC | 1 cut(s) | 2444 |
| BtgI | CCRYGG | 3 cut(s) | 1209, 1618, 3362 |
| BtgZI | GCGATG | 1 cut(s) | 355 |
| BtrI | CACGTC | 3 cut(s) | 246, 786, 3751 |
| BtsCI | GGATG | 7 cut(s) | 591, 970, 1351, 1366, 2135, 2392, 3022 |
| BtsI | GCAGTG | 4 cut(s) | 730, 1575, 1713, 3855 |
| BtsIMutI | CAGTG | 9 cut(s) | 315, 730, 1377, 1575, 1713, 2636, 2911, 3189, 3855 |
| BveI | ACCTGC | 1 cut(s) | 2089 |
| Cac8I | GCNNGC | 5 cut(s) | 62, 139, 352, 1581, 3880 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3266, 3680 |
| CfoI | GCGC | 4 cut(s) | 28, 574, 1035, 1966 |
| Cfr10I | RCCGGY | 5 cut(s) | 22, 137, 350, 400, 542 |
| Cfr9I | CCCGGG | 1 cut(s) | 942 |
| CpoI | CGGWCCG | 1 cut(s) | 714 |
| CseI | GACGC | 4 cut(s) | 575, 616, 925, 3668 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2625, 2660 |
| CspI | CGGWCCG | 1 cut(s) | 714 |
| DinI | GGCGCC | 2 cut(s) | 27, 1034 |
| DraIII | CACNNNGTG | 2 cut(s) | 865, 3836 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3589 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3589 |
| EaeI | YGGCCR | 6 cut(s) | 298, 345, 544, 753, 1131, 2251 |
| EagI | CGGCCG | 2 cut(s) | 298, 544 |
| Eam1104I | CTCTTC | 6 cut(s) | 541, 1071, 2864, 3265, 3381, 3543 |
| EarI | CTCTTC | 6 cut(s) | 541, 1071, 2864, 3265, 3381, 3543 |
| EciI | GGCGGA | 4 cut(s) | 88, 217, 377, 584 |
| EclXI | CGGCCG | 2 cut(s) | 298, 544 |
| Eco130I | CCWWGG | 3 cut(s) | 1659, 3295, 3362 |
| Eco147I | AGGCCT | 1 cut(s) | 2875 |
| Eco24I | GRGCYC | 3 cut(s) | 11, 2171, 3784 |
| Eco31I | GGTCTC | 1 cut(s) | 2463 |
| Eco47I | GGWCC | 8 cut(s) | 282, 403, 454, 466, 714, 748, 3841, 3980 |
| Eco52I | CGGCCG | 2 cut(s) | 298, 544 |
| Eco57I | CTGAAG | 9 cut(s) | 689, 755, 1341, 1350, 1401, 1535, 1548, 2254, 3129 |
| Eco88I | CYCGRG | 1 cut(s) | 942 |
| Eco91I | GGTNACC | 1 cut(s) | 2948 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1933 |
| EcoO109I | RGGNCCY | 3 cut(s) | 454, 748, 1325 |
| EcoO65I | GGTNACC | 1 cut(s) | 2948 |
| EcoRI | GAATTC | 1 cut(s) | 2554 |
| EcoT14I | CCWWGG | 3 cut(s) | 1659, 3295, 3362 |
| EcoT22I | ATGCAT | 1 cut(s) | 2152 |
| EcoT38I | GRGCYC | 3 cut(s) | 11, 2171, 3784 |
| EgeI | GGCGCC | 2 cut(s) | 27, 1034 |
| EheI | GGCGCC | 2 cut(s) | 27, 1034 |
| ErhI | CCWWGG | 3 cut(s) | 1659, 3295, 3362 |
| Esp3I | CGTCTC | 3 cut(s) | 190, 668, 908 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1474, 1506, 1520, 1552, 1909, 1941 |
| FaqI | GGGAC | 8 cut(s) | 68, 761, 1091, 1753, 2146, 2372, 2736, 3993 |
| FauI | CCCGC | 6 cut(s) | 142, 173, 446, 623, 825, 3655 |
| FauNDI | CATATG | 2 cut(s) | 3773, 4069 |
| FbaI | TGATCA | 1 cut(s) | 1183 |
| FokI | GGATG | 7 cut(s) | 578, 977, 1358, 1373, 2122, 2399, 3029 |
| FriOI | GRGCYC | 3 cut(s) | 11, 2171, 3784 |
| FspBI | CTAG | 5 cut(s) | 1580, 1773, 2015, 2118, 3377 |
| GlaI | GCGC | 4 cut(s) | 27, 573, 1034, 1965 |
| GsaI | CCCAGC | 3 cut(s) | 55, 81, 466 |
| GsuI | CTGGAG | 5 cut(s) | 761, 1449, 1836, 2487, 2676 |
| HaeII | RGCGCY | 2 cut(s) | 29, 1036 |
| HgaI | GACGC | 4 cut(s) | 575, 616, 925, 3668 |
| HhaI | GCGC | 4 cut(s) | 28, 574, 1035, 1966 |
| Hin1I | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1033 |
| Hin6I | GCGC | 4 cut(s) | 26, 572, 1033, 1964 |
| HinP1I | GCGC | 4 cut(s) | 26, 572, 1033, 1964 |
| HindIII | AAGCTT | 1 cut(s) | 2200 |
| HphI | GGTGA | 9 cut(s) | 12, 259, 652, 2445, 2870, 2960, 3061, 3110, 4022 |
| Hpy166II | GTNNAC | 8 cut(s) | 36, 282, 1057, 1901, 3052, 3353, 3407, 3409 |
| Hpy8I | GTNNAC | 8 cut(s) | 36, 282, 1057, 1901, 3052, 3353, 3407, 3409 |
| Hsp92I | GRCGYC | 5 cut(s) | 26, 32, 105, 567, 1033 |
| HspAI | GCGC | 4 cut(s) | 26, 572, 1033, 1964 |
| KasI | GGCGCC | 2 cut(s) | 25, 1032 |
| Kpn2I | TCCGGA | 2 cut(s) | 506, 2436 |
| KpnI | GGTACC | 1 cut(s) | 1942 |
| KroI | GCCGGC | 2 cut(s) | 137, 350 |
| KroNI | GCCGGC | 2 cut(s) | 139, 352 |
| Ksp22I | TGATCA | 1 cut(s) | 1183 |
| LmnI | GCTCC | 7 cut(s) | 69, 149, 335, 780, 886, 1959, 2657 |
| MaeI | CTAG | 5 cut(s) | 1580, 1773, 2015, 2118, 3377 |
| MbiI | CCGCTC | 2 cut(s) | 168, 820 |
| MfeI | CAATTG | 2 cut(s) | 1092, 2819 |
| MflI | RGATCY | 6 cut(s) | 95, 976, 2177, 2729, 2911, 3710 |
| MhlI | GDGCHC | 7 cut(s) | 11, 785, 1059, 1903, 2171, 2230, 3784 |
| MlsI | TGGCCA | 1 cut(s) | 1133 |
| MluNI | TGGCCA | 1 cut(s) | 1133 |
| Mly113I | GGCGCC | 2 cut(s) | 26, 1033 |
| MlyI | GAGTC | 8 cut(s) | 410, 476, 630, 780, 1987, 2038, 2528, 4052 |
| MmeI | TCCRAC | 3 cut(s) | 444, 613, 3868 |
| Mox20I | TGGCCA | 1 cut(s) | 1133 |
| Mph1103I | ATGCAT | 1 cut(s) | 2152 |
| MreI | CGCCGGCG | 1 cut(s) | 350 |
| MroI | TCCGGA | 2 cut(s) | 506, 2436 |
| MroNI | GCCGGC | 2 cut(s) | 137, 350 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3357 |
| MscI | TGGCCA | 1 cut(s) | 1133 |
| MseI | TTAA | 8 cut(s) | 1527, 1916, 2415, 2445, 2844, 2976, 3144, 3555 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1011, 1382 |
| Msp20I | TGGCCA | 1 cut(s) | 1133 |
| MspA1I | CMGCKG | 4 cut(s) | 549, 922, 932, 3803 |
| MspCI | CTTAAG | 1 cut(s) | 1526 |
| MunI | CAATTG | 2 cut(s) | 1092, 2819 |
| Mva1269I | GAATGC | 3 cut(s) | 128, 725, 2401 |
| MvnI | CGCG | 4 cut(s) | 303, 572, 600, 3662 |
| NaeI | GCCGGC | 2 cut(s) | 139, 352 |
| NarI | GGCGCC | 2 cut(s) | 26, 1033 |
| NciI | CCSGG | 4 cut(s) | 778, 943, 944, 2889 |
| NcoI | CCATGG | 1 cut(s) | 3362 |
| NdeI | CATATG | 2 cut(s) | 3773, 4069 |
| NgoMIV | GCCGGC | 2 cut(s) | 137, 350 |
| NheI | GCTAGC | 1 cut(s) | 1579 |
| NmeAIII | GCCGAG | 2 cut(s) | 276, 3908 |
| NmuCI | GTSAC | 9 cut(s) | 265, 658, 1238, 1570, 1711, 1840, 2264, 2389, 2948 |
| NsiI | ATGCAT | 1 cut(s) | 2152 |
| NspI | RCATGY | 2 cut(s) | 64, 2795 |
| OliI | CACNNNNGTG | 1 cut(s) | 1382 |
| PaeI | GCATGC | 1 cut(s) | 64 |
| PaqCI | CACCTGC | 1 cut(s) | 2089 |
| PasI | CCCWGGG | 1 cut(s) | 882 |
| PceI | AGGCCT | 1 cut(s) | 2875 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 99, 270, 378, 791, 794 |
| PctI | GAATGC | 3 cut(s) | 128, 725, 2401 |
| PdiI | GCCGGC | 2 cut(s) | 139, 352 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3357 |
| PflFI | GACNNNGTC | 1 cut(s) | 3160 |
| PfoI | TCCNGGA | 4 cut(s) | 450, 2464, 2578, 2887 |
| PleI | GAGTC | 8 cut(s) | 410, 476, 630, 779, 1987, 2038, 2528, 4052 |
| PluTI | GGCGCC | 2 cut(s) | 29, 1036 |
| PpsI | GAGTC | 8 cut(s) | 410, 476, 630, 779, 1987, 2038, 2528, 4052 |
| Ppu21I | YACGTR | 1 cut(s) | 3503 |
| PpuMI | RGGWCCY | 2 cut(s) | 454, 748 |
| Psp5II | RGGWCCY | 2 cut(s) | 454, 748 |
| PspEI | GGTNACC | 1 cut(s) | 2948 |
| PspFI | CCCAGC | 3 cut(s) | 51, 77, 462 |
| PspPPI | RGGWCCY | 2 cut(s) | 454, 748 |
| PstI | CTGCAG | 1 cut(s) | 3445 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3266, 3680 |
| PsuI | RGATCY | 6 cut(s) | 95, 976, 2177, 2729, 2911, 3710 |
| PsyI | GACNNNGTC | 1 cut(s) | 3160 |
| PvuII | CAGCTG | 3 cut(s) | 922, 932, 3803 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1011, 1382 |
| Rsr2I | CGGWCCG | 1 cut(s) | 714 |
| RsrII | CGGWCCG | 1 cut(s) | 714 |
| SaqAI | TTAA | 8 cut(s) | 1527, 1916, 2415, 2445, 2844, 2976, 3144, 3555 |
| ScaI | AGTACT | 1 cut(s) | 1027 |
| SchI | GAGTC | 8 cut(s) | 410, 476, 630, 780, 1987, 2038, 2528, 4052 |
| SduI | GDGCHC | 7 cut(s) | 11, 785, 1059, 1903, 2171, 2230, 3784 |
| SfcI | CTRYAG | 3 cut(s) | 1413, 3441, 3621 |
| SfoI | GGCGCC | 2 cut(s) | 27, 1034 |
| SgrAI | CRCCGGYG | 2 cut(s) | 22, 350 |
| SinI | GGWCC | 8 cut(s) | 282, 403, 454, 466, 714, 748, 3841, 3980 |
| SmaI | CCCGGG | 1 cut(s) | 944 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1011, 1382 |
| SmlI | CTYRAG | 2 cut(s) | 392, 1526 |
| SmoI | CTYRAG | 2 cut(s) | 392, 1526 |
| SphI | GCATGC | 1 cut(s) | 64 |
| SseBI | AGGCCT | 1 cut(s) | 2875 |
| SspDI | GGCGCC | 2 cut(s) | 25, 1032 |
| SspI | AATATT | 2 cut(s) | 2374, 4016 |
| SspMI | CTAG | 5 cut(s) | 1580, 1773, 2015, 2118, 3377 |
| StuI | AGGCCT | 1 cut(s) | 2875 |
| StyI | CCWWGG | 3 cut(s) | 1659, 3295, 3362 |
| TaqI | TCGA | 7 cut(s) | 5, 159, 381, 414, 609, 1151, 2995 |
| TaqII | GACCGA | 2 cut(s) | 731, 3412 |
| TatI | WGTACW | 5 cut(s) | 1025, 1403, 2494, 2855, 3406 |
| Tru1I | TTAA | 8 cut(s) | 1527, 1916, 2415, 2445, 2844, 2976, 3144, 3555 |
| Tru9I | TTAA | 8 cut(s) | 1527, 1916, 2415, 2445, 2844, 2976, 3144, 3555 |
| TscAI | CASTG | 9 cut(s) | 322, 730, 1384, 1575, 1720, 2643, 2911, 3196, 3862 |
| TseFI | GTSAC | 9 cut(s) | 265, 658, 1238, 1570, 1711, 1840, 2264, 2389, 2948 |
| Tsp45I | GTSAC | 9 cut(s) | 265, 658, 1238, 1570, 1711, 1840, 2264, 2389, 2948 |
| TspGWI | ACGGA | 9 cut(s) | 142, 262, 594, 646, 692, 1946, 2509, 2738, 3746 |
| TspMI | CCCGGG | 1 cut(s) | 942 |
| TspRI | CASTG | 9 cut(s) | 322, 730, 1384, 1575, 1720, 2643, 2911, 3196, 3862 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3160 |
| Vha464I | CTTAAG | 1 cut(s) | 1526 |
| VneI | GTGCAC | 2 cut(s) | 1055, 1899 |
| VpaK11BI | GGWCC | 8 cut(s) | 282, 403, 454, 466, 714, 748, 3841, 3980 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1933 |
| XapI | RAATTY | 3 cut(s) | 1768, 2554, 3888 |
| XbaI | TCTAGA | 1 cut(s) | 1772 |
| XceI | RCATGY | 2 cut(s) | 64, 2795 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 889, 1974 |
| XmaI | CCCGGG | 1 cut(s) | 942 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3357 |
| XspI | CTAG | 5 cut(s) | 1580, 1773, 2015, 2118, 3377 |
| ZraI | GACGTC | 2 cut(s) | 33, 106 |
| ZrmI | AGTACT | 1 cut(s) | 1027 |
| Zsp2I | ATGCAT | 1 cut(s) | 2152 |