Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0006561

Physical Location & Seq

Genomic Coordinates Reverse (-)

1414962 .. 1420877

Gene Structure 5916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g02310.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3276 bp

ATGTCGAGCCCTAGAGCTTCGACGGCGTCCACAGTCCAGGACTGTTGGGACTGCATGCTGCCGGGCCCGCCCAGCCGCAACAACTTCGGATCCGCCGACCTTAGCCTCTCCGGCCTCCTCGCATTCCCCTCCGGCAGCTCCATCTCCGTCCTCGATGCCCGCTCAATGCAGCTCGTTGTCAGCATCCCTATGCCACCTCCCACATCCTCCTCCACGTCATCGTCTCTCTCGCCTTTCGTCACCTCCGTCCGCTGGACCCCGCTCCCTCTCCGCCGCGACCTCCTCTCCACCGAGCCTTCCAGCTCCCACCTCCTCCTCTCCGCCGGCGATCGCCAGGGCCGCATCGCCCTCCTCGACCTCCGCCTCAAGTCTCCCGTCCTCTGGTTTGATACCGACTCCTCCCCCTCCAAACTCGCCATCCAGGACCTCGCGTGGGTCCAGGCCCGACCCGACTCCTACCTCCTCGCCTCCATCTCCGGATTCTCCTCCCTCTCCCTCTACAACAGCTCCACCGGCCGATGCTTCTGGAAATACGACGCGGCGCCTGAAATTCTCTCCTGCATCCGCCGTGACCCCTTCGATTCGCGCCATTTCTGTGTCGTCGGGCTCAAAGGATTCCTGCTCTCTGTCACCGTGTTAGGCGAGACAGAATCCGATGTCGTCATCAAGGAGCTTCAGATTCGGACTGACTCCACCGAGTTGCTGAAGCTGGAGAGGGACTTGGCCGGTGGAGTCTCCGAGAACTCGTCGTCGGCCTCGGCGGCGTTCCCGATCTACGCCGTGAGGTTCGCATTCTCGCCACAGTGGCGGCACATTCTTTTCGTCTCGTTCCCGAGGGAGCTGGTGGTGTTCGATTTGCAGTATGAGACGCCGCTTTTCTCTGCCACATTGCCTCGCGGCTGCGGCAAGCTTCTCGATGTGCTTCCGGATCCGAATCACGAGTTCCTCTACTGCGCTCATCTTGACGGGAAGCTCAGTACTTGGCGCCGAAAAGAAGGAGAGCAGGTACACATAATGTGTTCAATGGAAGAGCTGATGCCGTCAATTGGCACATCTGTCCCTTCTCCTTCGTTGCTTGCTCTTGTCATCTCCCAATCAGATTCGACCCTCCAGAATGTCGGCAAGATTTACTCTGATGATGTGCCTCATTCTCCTTTCCCTGACGTGGATTTCGATAATCCTTTTGATTTCTGTGATGAACCTCTTCTTGTTTCTAAAACGCATTTGATCTCAATTTCTGATGATGGAAAAATATGGAACTGGCTTTTGACTGCTGAAGGGCTTGAAGATAATCGAAAGGATGACACAAACTTGGGTATCAGTGAAGTGCCAGTTCCTGGGACAAATACAAACATTATAGTTTCTTCTACCGGAGGACTTGACATGGAAGCCGGTAAACAAATAGAAAAGATCAGTGGTGATAGAAGCCGACCTTCAAATTCTATTGTCAGCCATACAGACTTGTCACTAAAGATTAGCTTAGTTGGACAGCTTCAGCTTCTTTCTTCAGCAGTGACTATGCTAGCTGTACCTTCACCTTCTTCAACAGCTACTTTGGGCCGTGGGGGGAACTATCCTGTTGTAGCTGTTCCATTGGTTGCTTTGGGAACTCAAAGTGGGACAGTTGACGTTGTTGATGTTTCTGCCAATGCTGTCGCTGCAAGTTTTTCTGTTCATAATGGTACTGTTAGGGGATTAAGATGGCTTGGAAATTCCAGACTGGTTTCATTTTCATACAGTCAGGTGAGTGAAAAATCTGGAGGTTTCATCAACAGGCTCATTGTGACCTGTGCTAGAAGTGGCCTAAATAGACAATTCCGGATTTTGCAAAAGCCTGAACGTGCACCCATAAGAGCATTAAGAGCCTCATCCTCTGGGAGGTACCTTCTTATTTTGCTTCGTGATGCACCAGTAGAGGTTTGGGCAATGACAAAGAGTCCTATAATGCTTAGATCATTAGCTCTTCCATTTACGGTTTTGGAATGGACCCTCCCAGCAGTTCCCCGACCTGCTCAAAATGGACCTGCTAAGCAATCATCATCATCCCCCAAAGATCACACATCTGTGGCATCAGATGGGACATCCTCTCCAACAAAGGCATCATCTGATTCCAAGAGCTCAGATGGATCTCAAGATGACACTTCTGAAAGCTTTGCATTTGCACTAGCAAATGGTGCTCTTGGTGTTTTTGAGGTTCATGGGAGAAGGATCCGTGACTTCAGACCGAAATGGCCTTCTTCTTCATTTATCTCATCGGATGGACTAATTACTGCCATGGCCTACCGGTTGCCTCATGTAGTTATGGGGGACAGATCAGGAAATATTCGCTGGTGGGATGTAACTACTGGACATTCTTCTTCGTTTAACACTCACAGAGAAGGTATCCGGCGAATTAAATTCTCACCTGTTGTGCCTGGAGACCGCAGTAGGGGGCGCGTTGCTGTACTATTCTATGACAATACATTTTCAGTATTTGACCTTGATTCTCCGGACCCATTAGCCAATTCTCTTCTACAGCCTCAATTTCCTGGAACCCTTGTGTTGGAACTTGATTGGTTGCCTTTGCGGACTGACAAAAGTGATCCACTGTTATTGTGCATAGCTGGAGCTGATAGTAGCTTTCGCCTTGTTGAGATTAATATAATTGACAAAAAACTTGGTCATACCCACCAGCCCAGATCTATAAAAGAGAGGTTCCGTCCTATGCCTCTATGCTCTCCTATACTGCTTCCAACACCACATGCCCTGGCATTAAGAGTGATCTTACAATTGGGTGTCGAGCCCTCTTGGTTTAATACTTGCAGTACGACTTTAGATAAGAGGCCTCACAAAATTCCAGGAACTCCCAAGTCCAATGGGGATCTTCGAAGTTACATGATCGATTTACCACCTATTGGTGACCCTGTGGTACCAGAATTGCTGCTTAAAGTCTTAGAACCTTATCGTAAAGAAGGCTGCATACTGGATGATGAGAGGGCAAAATTATATGCAATGGTGGTTAACAAAGGTTTTTCTGTGAGATTTGCTTTTGCTGCTGCAATTTTTGGTGAATCCTCAGAAGCTCTTTTCTGGCTACAACTGCCTCATGCTCTTAACCATTTGATGAATAAGATGGTAAATAAGTCTCCACAAAAAACCCCTGCGTCAGCACCCATTCCAGAGATTGATGATGCATCTATGCTGAGTAGGATAACATCAAAAGGAAAGTCAGTGTCTGGAACAGAAAAGAAAGATGAAATGCAGAATCAAGGTCAGCTCAGGTTATTGGGCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1092

Amino Acids

119.12

Weight (kDa)

7.06

Isoelectric Point (pI)

56.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006561)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G33530 AT3G33530 AT3G33530 AT3G33530 AT3G33530
fragaria_vesca	FvH4_1g02820 FvH4_1g02820 FvH4_1g02820 FvH4_1g02820
malus_domestica	MD02G1028100.v1.1 MD15G1169800.v1.1
prunus_persica	Prupe.7G246700_v2.0.a1
pyrus_communis	pycom02g02310 pycom15g15140
rosa_chinensis	RchiOBHm_Chr2g0087941
rosa_laevigata	RLG00000015913
rosa_multiflora	Rmu_sc0013931.1_g000009 Rmu_sc0014136.1_g000007
rosa_roxburghii	Rroxscaffold_2G00153110
rosa_rugosa	Rorug01G0479800 Rorug01G0479900
rosa_samantha	Rh2AG034600 Rh2BG033600 Rh2CG034600 Rh2DG034300
rosa_wichuraiana	Rw2G002700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	994, 2017, 2032
Acc65I	GGTACC	2 cut(s)	1881, 2908
AccB1I	GGYRCC	4 cut(s)	541, 984, 1881, 2908
AccB7I	CCANNNNNTGG	2 cut(s)	1337, 2894
AccBSI	CCGCTC	2 cut(s)	162, 262
AccII	CGCG	6 cut(s)	276, 431, 539, 586, 897, 2436
AccIII	TCCGGA	4 cut(s)	476, 925, 1818, 2488
AclWI	GGATC	9 cut(s)	84, 97, 923, 936, 2134, 2203, 2216, 2576, 2868
AcoI	YGGCCR	2 cut(s)	514, 723
AcsI	RAATTY	5 cut(s)	549, 1438, 1711, 2396, 2832
AcuI	CTGAAG	6 cut(s)	659, 725, 1296, 1478, 1491, 2203
AcyI	GRCGYC	4 cut(s)	26, 542, 869, 985
AfaI	GTAC	8 cut(s)	979, 1008, 1530, 1684, 1883, 2445, 2806, 2910
AgeI	ACCGGT	1 cut(s)	2283
AgsI	TTSAA	4 cut(s)	1023, 1286, 1437, 1545
AhdI	GACNNNNNGTC	1 cut(s)	1935
AjiI	CACGTC	2 cut(s)	216, 1165
AjnI	CCWGG	9 cut(s)	36, 333, 420, 438, 1336, 2413, 2527, 2745, 2836
AleI	CACNNNNGTG	1 cut(s)	2063
Alw21I	GWGCWC	3 cut(s)	1846, 2120, 2179
Alw26I	GTCTC	8 cut(s)	228, 375, 638, 739, 829, 860, 2412, 3129
Alw44I	GTGCAC	1 cut(s)	1842
AlwI	GGATC	9 cut(s)	84, 97, 923, 936, 2134, 2203, 2216, 2576, 2868
AlwNI	CAGNNNCTG	2 cut(s)	1337, 3215
Ama87I	CYCGRG	1 cut(s)	832
Aor13HI	TCCGGA	4 cut(s)	476, 925, 1818, 2488
ApaI	GGGCCC	1 cut(s)	68
ApaLI	GTGCAC	1 cut(s)	1842
ApeKI	GCWGC	9 cut(s)	58, 135, 169, 900, 1658, 2920, 2955, 3032, 3035
ApoI	RAATTY	5 cut(s)	549, 1438, 1711, 2396, 2832
ArsI	GACNNNNNNTTYG	4 cut(s)	1154, 1186, 3191, 3223
AseI	ATTAAT	1 cut(s)	2637
AsiGI	ACCGGT	1 cut(s)	2283
AsiSI	GCGATCGC	1 cut(s)	331
Asp700I	GAANNNNTTC	1 cut(s)	1203
Asp718I	GGTACC	2 cut(s)	1881, 2908
AspLEI	GCGC	5 cut(s)	544, 588, 956, 987, 2436
AsuC2I	CCSGG	1 cut(s)	63
AsuHPI	GGTGA	8 cut(s)	232, 622, 1430, 1527, 1756, 2394, 2909, 3059
AsuII	TTCGAA	1 cut(s)	2866
AsuNHI	GCTAGC	1 cut(s)	1522
AvaI	CYCGRG	1 cut(s)	832
AvaII	GGWCC	6 cut(s)	255, 424, 436, 1986, 2021, 2491
BaeGI	GKGCMC	2 cut(s)	68, 1846
BaeI	ACNNNNGTAYC	2 cut(s)	1300, 1333
BamHI	GGATCC	3 cut(s)	89, 928, 2208
BanI	GGYRCC	4 cut(s)	541, 984, 1881, 2908
BanII	GRGCYC	5 cut(s)	11, 68, 609, 2120, 2784
BarI	GAAGNNNNNNTAC	2 cut(s)	2943, 2975
BauI	CACGAG	1 cut(s)	938
Bbv12I	GWGCWC	3 cut(s)	1846, 2120, 2179
BbvI	GCAGC	9 cut(s)	45, 147, 181, 887, 1645, 2907, 2942, 3019, 3022
BccI	CCATC	9 cut(s)	149, 425, 479, 1238, 1695, 2069, 2117, 2252, 3106
BceAI	ACGGC	5 cut(s)	39, 552, 764, 1024, 1545
BcgI	CGANNNNNNTGC	4 cut(s)	67, 101, 895, 929
BciT130I	CCWGG	9 cut(s)	38, 335, 422, 440, 1338, 2415, 2529, 2747, 2838
BciVI	GTATCC	1 cut(s)	2393
BcnI	CCSGG	1 cut(s)	63
BcoDI	GTCTC	8 cut(s)	228, 375, 638, 739, 829, 860, 2412, 3129
BfaI	CTAG	4 cut(s)	12, 1523, 1794, 2165
BfmI	CTRYAG	1 cut(s)	2513
BfoI	RGCGCY	2 cut(s)	545, 988
BfuAI	ACCTGC	3 cut(s)	994, 2017, 2032
BfuI	GTATCC	1 cut(s)	2393
BglI	GCCNNNNNGGC	3 cut(s)	111, 761, 805
BglII	AGATCT	1 cut(s)	2678
BlpI	GCTNAGC	1 cut(s)	2028
BmcAI	AGTACT	1 cut(s)	979
Bme18I	GGWCC	6 cut(s)	255, 424, 436, 1986, 2021, 2491
BmeRI	GACNNNNNGTC	1 cut(s)	1935
BmeT110I	CYCGRG	1 cut(s)	832
BmgBI	CACGTC	2 cut(s)	216, 1165
BmtI	GCTAGC	1 cut(s)	1526
BpmI	CTGGAG	5 cut(s)	731, 1094, 1779, 2436, 2625
Bpu10I	CCTNAGC	2 cut(s)	101, 3257
Bpu1102I	GCTNAGC	1 cut(s)	2028
Bpu14I	TTCGAA	1 cut(s)	2866
BpuEI	CTTGAG	2 cut(s)	350, 2115
BpuMI	CCSGG	1 cut(s)	63
Bsa29I	ATCGAT	1 cut(s)	2880
BsaBI	GATNNNNATC	1 cut(s)	933
BsaHI	GRCGYC	4 cut(s)	26, 542, 869, 985
BsaI	GGTCTC	1 cut(s)	2412
BsaJI	CCNNGG	7 cut(s)	334, 756, 833, 1337, 1561, 2274, 2745
BsaWI	WCCGGW	6 cut(s)	476, 925, 1370, 1818, 2283, 2488
BsaXI	ACNNNNNCTCC	8 cut(s)	269, 299, 491, 521, 990, 1020, 2071, 2101
Bse118I	RCCGGY	5 cut(s)	323, 512, 725, 1391, 2283
Bse1I	ACTGG	6 cut(s)	1265, 1331, 1725, 1910, 2350, 2967
Bse3DI	GCAATG	3 cut(s)	887, 1932, 2997
Bse8I	GATNNNNATC	1 cut(s)	933
BseAI	TCCGGA	4 cut(s)	476, 925, 1818, 2488
BseBI	CCWGG	9 cut(s)	38, 335, 422, 440, 1338, 2415, 2529, 2747, 2838
BseCI	ATCGAT	1 cut(s)	2880
BseDI	CCNNGG	7 cut(s)	334, 756, 833, 1337, 1561, 2274, 2745
BseJI	GATNNNNATC	1 cut(s)	933
BseMI	GCAATG	3 cut(s)	887, 1932, 2997
BseMII	CTCAG	5 cut(s)	988, 2133, 3069, 3173, 3271
BseNI	ACTGG	6 cut(s)	1265, 1331, 1725, 1910, 2350, 2967
BseRI	GAGGAG	9 cut(s)	107, 199, 272, 302, 305, 341, 388, 452, 475
BseSI	GKGCMC	2 cut(s)	68, 1846
BseX3I	CGGCCG	1 cut(s)	514
BseXI	GCAGC	9 cut(s)	45, 147, 181, 887, 1645, 2907, 2942, 3019, 3022
BseYI	CCCAGC	2 cut(s)	71, 1993
Bsh1236I	CGCG	6 cut(s)	276, 431, 539, 586, 897, 2436
Bsh1285I	CGRYCG	2 cut(s)	331, 517
BshNI	GGYRCC	4 cut(s)	541, 984, 1881, 2908
BshTI	ACCGGT	1 cut(s)	2283
BshVI	ATCGAT	1 cut(s)	2880
BsiEI	CGRYCG	2 cut(s)	331, 517
BsiHKAI	GWGCWC	3 cut(s)	1846, 2120, 2179
BsiHKCI	CYCGRG	1 cut(s)	832
BslFI	GGGAC	7 cut(s)	62, 731, 1043, 1354, 1633, 2092, 2321
BsmAI	GTCTC	8 cut(s)	228, 375, 638, 739, 829, 860, 2412, 3129
BsmBI	CGTCTC	3 cut(s)	228, 829, 860
BsmFI	GGGAC	7 cut(s)	62, 731, 1043, 1354, 1633, 2092, 2321
BsmI	GAATGC	2 cut(s)	122, 791
Bso31I	GGTCTC	1 cut(s)	2412
BsoBI	CYCGRG	1 cut(s)	832
Bsp119I	TTCGAA	1 cut(s)	2866
Bsp120I	GGGCCC	1 cut(s)	64
Bsp1286I	GDGCHC	7 cut(s)	11, 68, 609, 1846, 2120, 2179, 2784
Bsp13I	TCCGGA	4 cut(s)	476, 925, 1818, 2488
Bsp1720I	GCTNAGC	1 cut(s)	2028
Bsp19I	CCATGG	1 cut(s)	2274
BspCNI	CTCAG	5 cut(s)	987, 2132, 3068, 3174, 3270
BspDI	ATCGAT	1 cut(s)	2880
BspEI	TCCGGA	4 cut(s)	476, 925, 1818, 2488
BspFNI	CGCG	6 cut(s)	276, 431, 539, 586, 897, 2436
BspMI	ACCTGC	3 cut(s)	994, 2017, 2032
BspOI	GCTAGC	1 cut(s)	1526
BspPI	GGATC	9 cut(s)	84, 97, 923, 936, 2134, 2203, 2216, 2576, 2868
BspQI	GCTCTTC	2 cut(s)	1023, 1968
BspT104I	TTCGAA	1 cut(s)	2866
BspT107I	GGYRCC	4 cut(s)	541, 984, 1881, 2908
BspTNI	GGTCTC	1 cut(s)	2412
BsrBI	CCGCTC	2 cut(s)	162, 262
BsrDI	GCAATG	3 cut(s)	887, 1932, 2997
BsrFI	RCCGGY	5 cut(s)	323, 512, 725, 1391, 2283
BsrI	ACTGG	6 cut(s)	1265, 1331, 1725, 1910, 2350, 2967
BssAI	RCCGGY	5 cut(s)	323, 512, 725, 1391, 2283
BssECI	CCNNGG	7 cut(s)	334, 756, 833, 1337, 1561, 2274, 2745
BssNI	GRCGYC	4 cut(s)	26, 542, 869, 985
BssSI	CACGAG	1 cut(s)	938
BssT1I	CCWWGG	1 cut(s)	2274
Bst2BI	CACGAG	1 cut(s)	938
Bst2UI	CCWGG	9 cut(s)	38, 335, 422, 440, 1338, 2415, 2529, 2747, 2838
Bst4CI	ACNGT	9 cut(s)	34, 44, 634, 804, 1624, 1687, 1739, 1975, 2589
Bst6I	CTCTTC	4 cut(s)	1023, 1209, 1968, 2514
BstACI	GRCGYC	4 cut(s)	26, 542, 869, 985
BstAPI	GCANNNNNTGC	1 cut(s)	2174
BstBI	TTCGAA	1 cut(s)	2866
BstC8I	GCNNGC	7 cut(s)	56, 68, 160, 325, 908, 1077, 1524
BstDSI	CCRYGG	2 cut(s)	1561, 2274
BstEII	GGTNACC	1 cut(s)	2897
BstENI	CCTNNNNNAGG	1 cut(s)	1876
BstFNI	CGCG	6 cut(s)	276, 431, 539, 586, 897, 2436
BstH2I	RGCGCY	2 cut(s)	545, 988
BstHHI	GCGC	5 cut(s)	544, 588, 956, 987, 2436
BstMAI	GTCTC	8 cut(s)	228, 375, 638, 739, 829, 860, 2412, 3129
BstMCI	CGRYCG	2 cut(s)	331, 517
BstNI	CCWGG	9 cut(s)	38, 335, 422, 440, 1338, 2415, 2529, 2747, 2838
BstNSI	RCATGY	2 cut(s)	58, 2744
BstPI	GGTNACC	1 cut(s)	2897
BstSFI	CTRYAG	1 cut(s)	2513
BstSLI	GKGCMC	2 cut(s)	68, 1846
BstUI	CGCG	6 cut(s)	276, 431, 539, 586, 897, 2436
BstV1I	GCAGC	9 cut(s)	45, 147, 181, 887, 1645, 2907, 2942, 3019, 3022
BstX2I	RGATCY	6 cut(s)	89, 928, 2126, 2208, 2678, 2860
BstYI	RGATCY	6 cut(s)	89, 928, 2126, 2208, 2678, 2860
BstZI	CGGCCG	1 cut(s)	514
Bsu15I	ATCGAT	1 cut(s)	2880
BsuI	GTATCC	1 cut(s)	2393
BsuTUI	ATCGAT	1 cut(s)	2880
BtgI	CCRYGG	2 cut(s)	1561, 2274
BtgZI	GCGATG	1 cut(s)	328
BtrI	CACGTC	2 cut(s)	216, 1165
BtsI	GCAGTG	1 cut(s)	1518
BtsIMutI	CAGTG	6 cut(s)	809, 1327, 1420, 1518, 2585, 3216
BveI	ACCTGC	3 cut(s)	994, 2017, 2032
Cac8I	GCNNGC	7 cut(s)	56, 68, 160, 325, 908, 1077, 1524
CaiI	CAGNNNCTG	2 cut(s)	1337, 3215
CfoI	GCGC	5 cut(s)	544, 588, 956, 987, 2436
Cfr10I	RCCGGY	5 cut(s)	323, 512, 725, 1391, 2283
ClaI	ATCGAT	1 cut(s)	2880
CseI	GACGC	4 cut(s)	15, 545, 877, 3132
Csp6I	GTAC	8 cut(s)	978, 1007, 1529, 1683, 1882, 2444, 2805, 2909
CspAI	ACCGGT	1 cut(s)	2283
CspCI	CAANNNNNGTGG	2 cut(s)	2574, 2609
CviAII	CATG	8 cut(s)	55, 1384, 2198, 2275, 2294, 2741, 2875, 3086
CviQI	GTAC	8 cut(s)	978, 1007, 1529, 1683, 1882, 2444, 2805, 2909
DinI	GGCGCC	2 cut(s)	543, 986
DriI	GACNNNNNGTC	1 cut(s)	1935
EaeI	YGGCCR	2 cut(s)	514, 723
EagI	CGGCCG	1 cut(s)	514
Eam1104I	CTCTTC	4 cut(s)	1023, 1209, 1968, 2514
Eam1105I	GACNNNNNGTC	1 cut(s)	1935
EarI	CTCTTC	4 cut(s)	1023, 1209, 1968, 2514
EciI	GGCGGA	5 cut(s)	82, 260, 310, 350, 554
Ecl136II	GAGCTC	1 cut(s)	2118
EclXI	CGGCCG	1 cut(s)	514
Eco130I	CCWWGG	1 cut(s)	2274
Eco147I	AGGCCT	1 cut(s)	2824
Eco24I	GRGCYC	5 cut(s)	11, 68, 609, 2120, 2784
Eco31I	GGTCTC	1 cut(s)	2412
Eco47I	GGWCC	6 cut(s)	255, 424, 436, 1986, 2021, 2491
Eco52I	CGGCCG	1 cut(s)	514
Eco53kI	GAGCTC	1 cut(s)	2118
Eco57I	CTGAAG	6 cut(s)	659, 725, 1296, 1478, 1491, 2203
Eco88I	CYCGRG	1 cut(s)	832
Eco91I	GGTNACC	1 cut(s)	2897
EcoICRI	GAGCTC	1 cut(s)	2118
EcoNI	CCTNNNNNAGG	1 cut(s)	1876
EcoO109I	RGGNCCY	1 cut(s)	424
EcoO65I	GGTNACC	1 cut(s)	2897
EcoRII	CCWGG	9 cut(s)	36, 333, 420, 438, 1336, 2413, 2527, 2745, 2836
EcoT14I	CCWWGG	1 cut(s)	2274
EcoT22I	ATGCAT	1 cut(s)	3175
EcoT38I	GRGCYC	5 cut(s)	11, 68, 609, 2120, 2784
EgeI	GGCGCC	2 cut(s)	543, 986
EheI	GGCGCC	2 cut(s)	543, 986
ErhI	CCWWGG	1 cut(s)	2274
Esp3I	CGTCTC	3 cut(s)	228, 829, 860
FaeI	CATG	8 cut(s)	58, 1387, 2201, 2278, 2297, 2744, 2878, 3089
FalI	AAGNNNNNCTT	4 cut(s)	1417, 1449, 1463, 1495
FaqI	GGGAC	7 cut(s)	62, 731, 1043, 1354, 1633, 2092, 2321
FatI	CATG	8 cut(s)	54, 1383, 2197, 2274, 2293, 2740, 2874, 3085
FauI	CCCGC	3 cut(s)	75, 167, 267
FriOI	GRGCYC	5 cut(s)	11, 68, 609, 2120, 2784
FspBI	CTAG	4 cut(s)	12, 1523, 1794, 2165
GlaI	GCGC	5 cut(s)	543, 587, 955, 986, 2435
GsaI	CCCAGC	2 cut(s)	75, 1997
GsuI	CTGGAG	5 cut(s)	731, 1094, 1779, 2436, 2625
HaeII	RGCGCY	2 cut(s)	545, 988
HgaI	GACGC	4 cut(s)	15, 545, 877, 3132
HhaI	GCGC	5 cut(s)	544, 588, 956, 987, 2436
Hin1I	GRCGYC	4 cut(s)	26, 542, 869, 985
Hin1II	CATG	8 cut(s)	58, 1387, 2201, 2278, 2297, 2744, 2878, 3089
Hin6I	GCGC	5 cut(s)	542, 586, 954, 985, 2434
HinP1I	GCGC	5 cut(s)	542, 586, 954, 985, 2434
HincII	GTYRAC	2 cut(s)	1627, 3001
HindII	GTYRAC	2 cut(s)	1627, 3001
HindIII	AAGCTT	2 cut(s)	908, 2149
HpaI	GTTAAC	1 cut(s)	3001
HphI	GGTGA	8 cut(s)	232, 622, 1430, 1527, 1756, 2394, 2909, 3059
Hpy166II	GTNNAC	6 cut(s)	30, 1009, 1397, 1627, 1844, 3001
Hpy8I	GTNNAC	6 cut(s)	30, 1009, 1397, 1627, 1844, 3001
Hpy99I	CGWCG	5 cut(s)	25, 539, 605, 751, 754
HpyCH4III	ACNGT	9 cut(s)	34, 44, 634, 804, 1624, 1687, 1739, 1975, 2589
HpyCH4IV	ACGT	4 cut(s)	215, 1164, 1629, 1840
HpySE526I	ACGT	4 cut(s)	215, 1164, 1629, 1840
Hsp92I	GRCGYC	4 cut(s)	26, 542, 869, 985
Hsp92II	CATG	8 cut(s)	58, 1387, 2201, 2278, 2297, 2744, 2878, 3089
HspAI	GCGC	5 cut(s)	542, 586, 954, 985, 2434
KasI	GGCGCC	2 cut(s)	541, 984
Kpn2I	TCCGGA	4 cut(s)	476, 925, 1818, 2488
KpnI	GGTACC	2 cut(s)	1885, 2912
KroI	GCCGGC	1 cut(s)	323
KroNI	GCCGGC	1 cut(s)	325
KspAI	GTTAAC	1 cut(s)	3001
LguI	GCTCTTC	2 cut(s)	1023, 1968
LmnI	GCTCC	7 cut(s)	143, 267, 308, 512, 670, 838, 2606
Lsp1109I	GCAGC	9 cut(s)	45, 147, 181, 887, 1645, 2907, 2942, 3019, 3022
MaeI	CTAG	4 cut(s)	12, 1523, 1794, 2165
MaeII	ACGT	4 cut(s)	215, 1164, 1629, 1840
MbiI	CCGCTC	2 cut(s)	162, 262
MfeI	CAATTG	2 cut(s)	1044, 2768
MflI	RGATCY	6 cut(s)	89, 928, 2126, 2208, 2678, 2860
MhlI	GDGCHC	7 cut(s)	11, 68, 609, 1846, 2120, 2179, 2784
Mly113I	GGCGCC	2 cut(s)	542, 985
MlyI	GAGTC	5 cut(s)	389, 446, 683, 741, 1945
MmeI	TCCRAC	4 cut(s)	1465, 2114, 2523, 2756
Mph1103I	ATGCAT	1 cut(s)	3175
MreI	CGCCGGCG	1 cut(s)	323
MroI	TCCGGA	4 cut(s)	476, 925, 1818, 2488
MroNI	GCCGGC	1 cut(s)	323
MroXI	GAANNNNTTC	1 cut(s)	1203
MslI	CAYNNNNRTG	3 cut(s)	188, 594, 2063
MspA1I	CMGCKG	1 cut(s)	252
MunI	CAATTG	2 cut(s)	1044, 2768
Mva1269I	GAATGC	2 cut(s)	122, 791
MvaI	CCWGG	9 cut(s)	38, 335, 422, 440, 1338, 2415, 2529, 2747, 2838
MvnI	CGCG	6 cut(s)	276, 431, 539, 586, 897, 2436
NaeI	GCCGGC	1 cut(s)	325
NarI	GGCGCC	2 cut(s)	542, 985
NciI	CCSGG	1 cut(s)	63
NcoI	CCATGG	1 cut(s)	2274
NgoMIV	GCCGGC	1 cut(s)	323
NheI	GCTAGC	1 cut(s)	1522
NlaIII	CATG	8 cut(s)	58, 1387, 2201, 2278, 2297, 2744, 2878, 3089
NmeAIII	GCCGAG	1 cut(s)	737
NmuCI	GTSAC	8 cut(s)	238, 569, 628, 1464, 1513, 1783, 2213, 2897
NsiI	ATGCAT	1 cut(s)	3175
NspI	RCATGY	2 cut(s)	58, 2744
NspV	TTCGAA	1 cut(s)	2866
OliI	CACNNNNGTG	1 cut(s)	2063
PaeI	GCATGC	1 cut(s)	58
PceI	AGGCCT	1 cut(s)	2824
PciSI	GCTCTTC	2 cut(s)	1023, 1968
PcsI	WCGNNNNNNNCGW	4 cut(s)	93, 243, 351, 1170
PctI	GAATGC	2 cut(s)	122, 791
PdiI	GCCGGC	1 cut(s)	325
PdmI	GAANNNNTTC	1 cut(s)	1203
PflFI	GACNNNGTC	1 cut(s)	25
PflMI	CCANNNNNTGG	2 cut(s)	1337, 2894
PfoI	TCCNGGA	4 cut(s)	36, 420, 2527, 2836
PinAI	ACCGGT	1 cut(s)	2283
Ple19I	CGATCG	1 cut(s)	331
PleI	GAGTC	5 cut(s)	389, 446, 683, 740, 1944
PluTI	GGCGCC	2 cut(s)	545, 988
PpsI	GAGTC	5 cut(s)	389, 446, 683, 740, 1944
PpuMI	RGGWCCY	1 cut(s)	424
PshBI	ATTAAT	1 cut(s)	2637
Psp124BI	GAGCTC	1 cut(s)	2120
Psp5II	RGGWCCY	1 cut(s)	424
Psp6I	CCWGG	9 cut(s)	36, 333, 420, 438, 1336, 2413, 2527, 2745, 2836
PspEI	GGTNACC	1 cut(s)	2897
PspFI	CCCAGC	2 cut(s)	71, 1993
PspGI	CCWGG	9 cut(s)	36, 333, 420, 438, 1336, 2413, 2527, 2745, 2836
PspOMI	GGGCCC	1 cut(s)	64
PspPPI	RGGWCCY	1 cut(s)	424
PstNI	CAGNNNCTG	2 cut(s)	1337, 3215
PsuI	RGATCY	6 cut(s)	89, 928, 2126, 2208, 2678, 2860
PsyI	GACNNNGTC	1 cut(s)	25
PvuI	CGATCG	1 cut(s)	331
RgaI	GCGATCGC	1 cut(s)	331
RsaI	GTAC	8 cut(s)	979, 1008, 1530, 1684, 1883, 2445, 2806, 2910
RsaNI	GTAC	8 cut(s)	978, 1007, 1529, 1683, 1882, 2444, 2805, 2909
RseI	CAYNNNNRTG	3 cut(s)	188, 594, 2063
SacI	GAGCTC	1 cut(s)	2120
SapI	GCTCTTC	2 cut(s)	1023, 1968
ScaI	AGTACT	1 cut(s)	979
SchI	GAGTC	5 cut(s)	389, 446, 683, 741, 1945
SduI	GDGCHC	7 cut(s)	11, 68, 609, 1846, 2120, 2179, 2784
SfaAI	GCGATCGC	1 cut(s)	331
SfcI	CTRYAG	1 cut(s)	2513
SfoI	GGCGCC	2 cut(s)	543, 986
SfuI	TTCGAA	1 cut(s)	2866
SgfI	GCGATCGC	1 cut(s)	331
SgrAI	CRCCGGYG	1 cut(s)	323
SinI	GGWCC	6 cut(s)	255, 424, 436, 1986, 2021, 2491
SmiMI	CAYNNNNRTG	3 cut(s)	188, 594, 2063
SmlI	CTYRAG	2 cut(s)	365, 2130
SmoI	CTYRAG	2 cut(s)	365, 2130
SphI	GCATGC	1 cut(s)	58
SseBI	AGGCCT	1 cut(s)	2824
SspDI	GGCGCC	2 cut(s)	541, 984
SspI	AATATT	1 cut(s)	2323
SspMI	CTAG	4 cut(s)	12, 1523, 1794, 2165
SstI	GAGCTC	1 cut(s)	2120
StuI	AGGCCT	1 cut(s)	2824
StyI	CCWWGG	1 cut(s)	2274
TaaI	ACNGT	9 cut(s)	34, 44, 634, 804, 1624, 1687, 1739, 1975, 2589
TaiI	ACGT	4 cut(s)	218, 1167, 1632, 1843
TaqII	GACCGA	1 cut(s)	2239
TatI	WGTACW	2 cut(s)	977, 2443
TauI	GCSGC	9 cut(s)	78, 276, 342, 542, 764, 811, 874, 900, 906
TscAI	CASTG	6 cut(s)	809, 1327, 1420, 1518, 2592, 3216
TseFI	GTSAC	8 cut(s)	238, 569, 628, 1464, 1513, 1783, 2213, 2897
TseI	GCWGC	9 cut(s)	58, 135, 169, 900, 1658, 2920, 2955, 3032, 3035
Tsp45I	GTSAC	8 cut(s)	238, 569, 628, 1464, 1513, 1783, 2213, 2897
TspDTI	ATGAA	9 cut(s)	1212, 1664, 1716, 1722, 1756, 2186, 2232, 3119, 3249
TspGWI	ACGGA	4 cut(s)	136, 235, 2201, 2687
TspRI	CASTG	6 cut(s)	809, 1327, 1420, 1518, 2592, 3216
Tth111I	GACNNNGTC	1 cut(s)	25
Van91I	CCANNNNNTGG	2 cut(s)	1337, 2894
VneI	GTGCAC	1 cut(s)	1842
VpaK11BI	GGWCC	6 cut(s)	255, 424, 436, 1986, 2021, 2491
VspI	ATTAAT	1 cut(s)	2637
XagI	CCTNNNNNAGG	1 cut(s)	1876
XapI	RAATTY	5 cut(s)	549, 1438, 1711, 2396, 2832
XceI	RCATGY	2 cut(s)	58, 2744
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1917
XmnI	GAANNNNTTC	1 cut(s)	1203
XspI	CTAG	4 cut(s)	12, 1523, 1794, 2165
ZrmI	AGTACT	1 cut(s)	979
Zsp2I	ATGCAT	1 cut(s)	3175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.