Protein of unknown function (DUF629)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47890 AT3G47890 AT3G47910 AT3G47910 |
| fragaria_vesca | FvH4_5g15740 FvH4_5g15740 |
| malus_domestica | MD06G1185800.v1.1 MD14G1192000.v1.1 |
| prunus_persica | Prupe.5G184600_v2.0.a1 Prupe.5G184600_v2.0.a1 |
| pyrus_communis | pycom06g16520 pycom14g15970 |
| rosa_chinensis | RchiOBHm_Chr7g0180371 |
| rosa_laevigata | RLG00000005273 |
| rosa_multiflora | Rmu_sc0003526.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00272950 |
| rosa_rugosa | Rorug06G0432500 |
| rosa_samantha | Rh7AG033100 Rh7BG033000 Rh7CG034900 Rh7DG033500 |
| rosa_wichuraiana | Rw7G002760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 4730 |
| Acc16I | TGCGCA | 2 cut(s) | 822, 2105 |
| Acc36I | ACCTGC | 1 cut(s) | 2361 |
| AccB1I | GGYRCC | 2 cut(s) | 3554, 4030 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3943 |
| AccI | GTMKAC | 2 cut(s) | 318, 1272 |
| AccII | CGCG | 3 cut(s) | 26, 911, 1520 |
| AccIII | TCCGGA | 1 cut(s) | 125 |
| AcoI | YGGCCR | 1 cut(s) | 708 |
| AcsI | RAATTY | 8 cut(s) | 680, 1031, 1369, 1385, 1775, 2282, 3886, 4384 |
| AcvI | CACGTG | 1 cut(s) | 3943 |
| AcyI | GRCGYC | 2 cut(s) | 3469, 3722 |
| AdeI | CACNNNGTG | 1 cut(s) | 1944 |
| AfaI | GTAC | 7 cut(s) | 467, 3701, 4119, 4204, 4319, 4607, 4718 |
| AfeI | AGCGCT | 1 cut(s) | 3997 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 286, 923, 1535, 2266, 2715, 2968, 3943, 4448, 4615 |
| AflII | CTTAAG | 2 cut(s) | 1058, 2206 |
| AflIII | ACRYGT | 4 cut(s) | 3696, 4232, 4501, 4535 |
| AgeI | ACCGGT | 1 cut(s) | 4448 |
| AhlI | ACTAGT | 1 cut(s) | 2462 |
| AjiI | CACGTC | 1 cut(s) | 3697 |
| AjnI | CCWGG | 5 cut(s) | 594, 743, 1860, 3300, 4304 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1917, 1949 |
| AleI | CACNNNNGTG | 1 cut(s) | 1071 |
| Alw26I | GTCTC | 9 cut(s) | 33, 396, 542, 2264, 3518, 3562, 3882, 4535, 4807 |
| Alw44I | GTGCAC | 1 cut(s) | 3214 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2999, 4200 |
| Ama87I | CYCGRG | 1 cut(s) | 2820 |
| Aor13HI | TCCGGA | 1 cut(s) | 125 |
| Aor51HI | AGCGCT | 1 cut(s) | 3997 |
| AoxI | GGCC | 8 cut(s) | 4, 708, 749, 914, 1131, 1541, 1797, 2257 |
| ApaLI | GTGCAC | 1 cut(s) | 3214 |
| ApoI | RAATTY | 8 cut(s) | 680, 1031, 1369, 1385, 1775, 2282, 3886, 4384 |
| AseI | ATTAAT | 1 cut(s) | 1848 |
| AsiGI | ACCGGT | 1 cut(s) | 4448 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1031, 2162, 3654 |
| AspLEI | GCGC | 5 cut(s) | 823, 1222, 2106, 3998, 4379 |
| AspS9I | GGNCC | 6 cut(s) | 4, 128, 914, 2069, 2657, 4618 |
| AsuII | TTCGAA | 1 cut(s) | 1348 |
| AsuNHI | GCTAGC | 1 cut(s) | 2794 |
| AvaI | CYCGRG | 1 cut(s) | 2820 |
| AvaII | GGWCC | 4 cut(s) | 128, 2069, 2657, 4618 |
| AxyI | CCTNAGG | 1 cut(s) | 573 |
| BaeGI | GKGCMC | 3 cut(s) | 2722, 3218, 4354 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 329, 362, 608, 641 |
| BamHI | GGATCC | 1 cut(s) | 715 |
| BanI | GGYRCC | 2 cut(s) | 3554, 4030 |
| BanII | GRGCYC | 3 cut(s) | 606, 1970, 3797 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 449, 481 |
| BauI | CACGAG | 1 cut(s) | 3927 |
| BbrPI | CACGTG | 1 cut(s) | 3943 |
| BbsI | GAAGAC | 8 cut(s) | 42, 530, 843, 1904, 2022, 3642, 3818, 4557 |
| BbvCI | CCTCAGC | 1 cut(s) | 2312 |
| BceAI | ACGGC | 6 cut(s) | 31, 67, 72, 133, 3424, 3577 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 177, 211 |
| BciT130I | CCWGG | 5 cut(s) | 596, 745, 1862, 3302, 4306 |
| BciVI | GTATCC | 1 cut(s) | 4077 |
| BclI | TGATCA | 2 cut(s) | 1608, 3442 |
| BcoDI | GTCTC | 9 cut(s) | 33, 396, 542, 2264, 3518, 3562, 3882, 4535, 4807 |
| BcuI | ACTAGT | 1 cut(s) | 2462 |
| BfmI | CTRYAG | 7 cut(s) | 1781, 1989, 2225, 2583, 4285, 4512, 4545 |
| BfoI | RGCGCY | 1 cut(s) | 3999 |
| BfrI | CTTAAG | 2 cut(s) | 1058, 2206 |
| BfuAI | ACCTGC | 1 cut(s) | 2361 |
| BfuI | GTATCC | 1 cut(s) | 4077 |
| BlpI | GCTNAGC | 2 cut(s) | 1969, 2591 |
| BmcAI | AGTACT | 1 cut(s) | 4119 |
| Bme1390I | CCNGG | 5 cut(s) | 596, 745, 1862, 3302, 4306 |
| Bme18I | GGWCC | 4 cut(s) | 128, 2069, 2657, 4618 |
| BmeT110I | CYCGRG | 1 cut(s) | 2820 |
| BmgBI | CACGTC | 1 cut(s) | 3697 |
| BmgT120I | GGNCC | 6 cut(s) | 4, 128, 914, 2069, 2657, 4618 |
| BmiI | GGNNCC | 9 cut(s) | 81, 717, 915, 964, 2071, 3310, 3556, 4032, 4620 |
| BmrFI | CCNGG | 5 cut(s) | 596, 745, 1862, 3302, 4306 |
| BmrI | ACTGGG | 3 cut(s) | 1009, 2637, 3462 |
| BmtI | GCTAGC | 1 cut(s) | 2798 |
| BmuI | ACTGGG | 3 cut(s) | 1009, 2637, 3462 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1863 |
| BpiI | GAAGAC | 8 cut(s) | 42, 530, 843, 1904, 2022, 3642, 3818, 4557 |
| BpmI | CTGGAG | 5 cut(s) | 1416, 1658, 2022, 2156, 4319 |
| Bpu10I | CCTNAGC | 3 cut(s) | 605, 2312, 3132 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1969, 2591 |
| Bpu14I | TTCGAA | 1 cut(s) | 1348 |
| BpuEI | CTTGAG | 1 cut(s) | 2174 |
| Bsa29I | ATCGAT | 3 cut(s) | 1514, 2601, 4755 |
| BsaAI | YACGTR | 2 cut(s) | 3587, 3943 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4592 |
| BsaHI | GRCGYC | 2 cut(s) | 3469, 3722 |
| BsaI | GGTCTC | 1 cut(s) | 3518 |
| BsaJI | CCNNGG | 9 cut(s) | 660, 711, 909, 1307, 1686, 1861, 2862, 3703, 4609 |
| BsaWI | WCCGGW | 4 cut(s) | 125, 2968, 3508, 4448 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2918, 2948, 3300, 3330 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 286, 923, 1535, 2266, 2715, 2968, 3943, 4448, 4615 |
| Bse118I | RCCGGY | 2 cut(s) | 1164, 4448 |
| Bse1I | ACTGG | 8 cut(s) | 1004, 2139, 2632, 2660, 3312, 3457, 4125, 4210 |
| Bse21I | CCTNAGG | 1 cut(s) | 573 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4592 |
| BseAI | TCCGGA | 1 cut(s) | 125 |
| BseBI | CCWGG | 5 cut(s) | 596, 745, 1862, 3302, 4306 |
| BseCI | ATCGAT | 3 cut(s) | 1514, 2601, 4755 |
| BseDI | CCNNGG | 9 cut(s) | 660, 711, 909, 1307, 1686, 1861, 2862, 3703, 4609 |
| BseJI | GATNNNNATC | 1 cut(s) | 4592 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 286, 923, 1535, 2266, 2715, 2968, 3943, 4448, 4615 |
| BseNI | ACTGG | 8 cut(s) | 1004, 2139, 2632, 2660, 3312, 3457, 4125, 4210 |
| BseRI | GAGGAG | 9 cut(s) | 485, 805, 1514, 1518, 1895, 3086, 3089, 3092, 3472 |
| BseSI | GKGCMC | 3 cut(s) | 2722, 3218, 4354 |
| BsgI | GTGCAG | 4 cut(s) | 1235, 1611, 2443, 3398 |
| Bsh1236I | CGCG | 3 cut(s) | 26, 911, 1520 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1518 |
| BshFI | GGCC | 8 cut(s) | 6, 710, 751, 916, 1133, 1543, 1799, 2259 |
| BshNI | GGYRCC | 2 cut(s) | 3554, 4030 |
| BshTI | ACCGGT | 1 cut(s) | 4448 |
| BshVI | ATCGAT | 3 cut(s) | 1514, 2601, 4755 |
| BsiEI | CGRYCG | 1 cut(s) | 1518 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2820 |
| BsiSI | CCGG | 6 cut(s) | 126, 1165, 2260, 2969, 3509, 4449 |
| BslFI | GGGAC | 2 cut(s) | 1288, 4229 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 286, 923, 1535, 2266, 2715, 2968, 3943, 4448, 4615 |
| BsmAI | GTCTC | 9 cut(s) | 33, 396, 542, 2264, 3518, 3562, 3882, 4535, 4807 |
| BsmBI | CGTCTC | 2 cut(s) | 33, 4807 |
| BsmFI | GGGAC | 2 cut(s) | 1288, 4229 |
| BsmI | GAATGC | 2 cut(s) | 182, 952 |
| BsnI | GGCC | 8 cut(s) | 6, 710, 751, 916, 1133, 1543, 1799, 2259 |
| Bso31I | GGTCTC | 1 cut(s) | 3518 |
| BsoBI | CYCGRG | 1 cut(s) | 2820 |
| Bsp119I | TTCGAA | 1 cut(s) | 1348 |
| Bsp13I | TCCGGA | 1 cut(s) | 125 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1969, 2591 |
| Bsp19I | CCATGG | 1 cut(s) | 1307 |
| BspANI | GGCC | 8 cut(s) | 6, 710, 751, 916, 1133, 1543, 1799, 2259 |
| BspDI | ATCGAT | 3 cut(s) | 1514, 2601, 4755 |
| BspEI | TCCGGA | 1 cut(s) | 125 |
| BspFNI | CGCG | 3 cut(s) | 26, 911, 1520 |
| BspHI | TCATGA | 1 cut(s) | 1639 |
| BspLI | GGNNCC | 9 cut(s) | 81, 717, 915, 964, 2071, 3310, 3556, 4032, 4620 |
| BspMAI | CTGCAG | 3 cut(s) | 1785, 2229, 2587 |
| BspMI | ACCTGC | 1 cut(s) | 2361 |
| BspOI | GCTAGC | 1 cut(s) | 2798 |
| BspQI | GCTCTTC | 2 cut(s) | 2322, 3178 |
| BspT104I | TTCGAA | 1 cut(s) | 1348 |
| BspT107I | GGYRCC | 2 cut(s) | 3554, 4030 |
| BspTI | CTTAAG | 2 cut(s) | 1058, 2206 |
| BspTNI | GGTCTC | 1 cut(s) | 3518 |
| BsrFI | RCCGGY | 2 cut(s) | 1164, 4448 |
| BsrI | ACTGG | 8 cut(s) | 1004, 2139, 2632, 2660, 3312, 3457, 4125, 4210 |
| BssAI | RCCGGY | 2 cut(s) | 1164, 4448 |
| BssECI | CCNNGG | 9 cut(s) | 660, 711, 909, 1307, 1686, 1861, 2862, 3703, 4609 |
| BssNI | GRCGYC | 2 cut(s) | 3469, 3722 |
| BssSI | CACGAG | 1 cut(s) | 3927 |
| BssT1I | CCWWGG | 4 cut(s) | 660, 1307, 2862, 3703 |
| Bst2BI | CACGAG | 1 cut(s) | 3927 |
| Bst2UI | CCWGG | 5 cut(s) | 596, 745, 1862, 3302, 4306 |
| BstACI | GRCGYC | 2 cut(s) | 3469, 3722 |
| BstAFI | CTTAAG | 2 cut(s) | 1058, 2206 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1944 |
| BstBAI | YACGTR | 2 cut(s) | 3587, 3943 |
| BstBI | TTCGAA | 1 cut(s) | 1348 |
| BstC8I | GCNNGC | 8 cut(s) | 1092, 1159, 1218, 1633, 2201, 2718, 2796, 3423 |
| BstDSI | CCRYGG | 3 cut(s) | 909, 1307, 4609 |
| BstEII | GGTNACC | 1 cut(s) | 1856 |
| BstFNI | CGCG | 3 cut(s) | 26, 911, 1520 |
| BstH2I | RGCGCY | 1 cut(s) | 3999 |
| BstHHI | GCGC | 5 cut(s) | 823, 1222, 2106, 3998, 4379 |
| BstMAI | GTCTC | 9 cut(s) | 33, 396, 542, 2264, 3518, 3562, 3882, 4535, 4807 |
| BstMCI | CGRYCG | 1 cut(s) | 1518 |
| BstNI | CCWGG | 5 cut(s) | 596, 745, 1862, 3302, 4306 |
| BstNSI | RCATGY | 6 cut(s) | 2716, 3670, 4236, 4377, 4505, 4539 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1863 |
| BstPI | GGTNACC | 1 cut(s) | 1856 |
| BstSCI | CCNGG | 5 cut(s) | 594, 743, 1860, 3300, 4304 |
| BstSFI | CTRYAG | 7 cut(s) | 1781, 1989, 2225, 2583, 4285, 4512, 4545 |
| BstSLI | GKGCMC | 3 cut(s) | 2722, 3218, 4354 |
| BstSNI | TACGTA | 1 cut(s) | 3587 |
| BstUI | CGCG | 3 cut(s) | 26, 911, 1520 |
| BstV2I | GAAGAC | 8 cut(s) | 42, 530, 843, 1904, 2022, 3642, 3818, 4557 |
| BstX2I | RGATCY | 6 cut(s) | 325, 715, 1321, 2058, 2239, 3949 |
| BstYI | RGATCY | 6 cut(s) | 325, 715, 1321, 2058, 2239, 3949 |
| Bsu15I | ATCGAT | 3 cut(s) | 1514, 2601, 4755 |
| Bsu36I | CCTNAGG | 1 cut(s) | 573 |
| BsuI | GTATCC | 1 cut(s) | 4077 |
| BsuRI | GGCC | 8 cut(s) | 6, 710, 751, 916, 1133, 1543, 1799, 2259 |
| BsuTUI | ATCGAT | 3 cut(s) | 1514, 2601, 4755 |
| BtgI | CCRYGG | 3 cut(s) | 909, 1307, 4609 |
| BtgZI | GCGATG | 2 cut(s) | 2915, 4130 |
| BtrI | CACGTC | 1 cut(s) | 3697 |
| BtsI | GCAGTG | 2 cut(s) | 2222, 3684 |
| BveI | ACCTGC | 1 cut(s) | 2361 |
| Cac8I | GCNNGC | 8 cut(s) | 1092, 1159, 1218, 1633, 2201, 2718, 2796, 3423 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2999, 4200 |
| CciI | TCATGA | 1 cut(s) | 1639 |
| CfoI | GCGC | 5 cut(s) | 823, 1222, 2106, 3998, 4379 |
| Cfr10I | RCCGGY | 2 cut(s) | 1164, 4448 |
| Cfr13I | GGNCC | 6 cut(s) | 4, 128, 914, 2069, 2657, 4618 |
| Cfr42I | CCGCGG | 1 cut(s) | 912 |
| ClaI | ATCGAT | 3 cut(s) | 1514, 2601, 4755 |
| CseI | GACGC | 4 cut(s) | 15, 143, 3477, 3711 |
| Csp6I | GTAC | 7 cut(s) | 466, 3700, 4118, 4203, 4318, 4606, 4717 |
| CspAI | ACCGGT | 1 cut(s) | 4448 |
| CviQI | GTAC | 7 cut(s) | 466, 3700, 4118, 4203, 4318, 4606, 4717 |
| DraI | TTTAAA | 2 cut(s) | 3030, 3861 |
| DraIII | CACNNNGTG | 1 cut(s) | 1944 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4730 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4730 |
| EaeI | YGGCCR | 1 cut(s) | 708 |
| Ecl136II | GAGCTC | 2 cut(s) | 604, 3795 |
| Eco105I | TACGTA | 1 cut(s) | 3587 |
| Eco130I | CCWWGG | 4 cut(s) | 660, 1307, 2862, 3703 |
| Eco147I | AGGCCT | 2 cut(s) | 751, 1799 |
| Eco24I | GRGCYC | 3 cut(s) | 606, 1970, 3797 |
| Eco31I | GGTCTC | 1 cut(s) | 3518 |
| Eco32I | GATATC | 1 cut(s) | 3360 |
| Eco47I | GGWCC | 4 cut(s) | 128, 2069, 2657, 4618 |
| Eco47III | AGCGCT | 1 cut(s) | 3997 |
| Eco53kI | GAGCTC | 2 cut(s) | 604, 3795 |
| Eco72I | CACGTG | 1 cut(s) | 3943 |
| Eco81I | CCTNAGG | 1 cut(s) | 573 |
| Eco88I | CYCGRG | 1 cut(s) | 2820 |
| Eco91I | GGTNACC | 1 cut(s) | 1856 |
| EcoICRI | GAGCTC | 2 cut(s) | 604, 3795 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2069 |
| EcoO65I | GGTNACC | 1 cut(s) | 1856 |
| EcoRI | GAATTC | 1 cut(s) | 1031 |
| EcoRII | CCWGG | 5 cut(s) | 594, 743, 1860, 3300, 4304 |
| EcoRV | GATATC | 1 cut(s) | 3360 |
| EcoT14I | CCWWGG | 4 cut(s) | 660, 1307, 2862, 3703 |
| EcoT22I | ATGCAT | 3 cut(s) | 1206, 1438, 1736 |
| EcoT38I | GRGCYC | 3 cut(s) | 606, 1970, 3797 |
| ErhI | CCWWGG | 4 cut(s) | 660, 1307, 2862, 3703 |
| Esp3I | CGTCTC | 2 cut(s) | 33, 4807 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1052, 1084, 1712, 1744, 2507, 2539, 2769, 2801 |
| FaqI | GGGAC | 2 cut(s) | 1288, 4229 |
| FauI | CCCGC | 3 cut(s) | 904, 917, 2709 |
| FauNDI | CATATG | 3 cut(s) | 1096, 1200, 2452 |
| FbaI | TGATCA | 2 cut(s) | 1608, 3442 |
| FblI | GTMKAC | 2 cut(s) | 318, 1272 |
| FriOI | GRGCYC | 3 cut(s) | 606, 1970, 3797 |
| FspAI | RTGCGCAY | 1 cut(s) | 2105 |
| FspI | TGCGCA | 2 cut(s) | 822, 2105 |
| GlaI | GCGC | 5 cut(s) | 822, 1221, 2105, 3997, 4378 |
| GsuI | CTGGAG | 5 cut(s) | 1416, 1658, 2022, 2156, 4319 |
| HaeII | RGCGCY | 1 cut(s) | 3999 |
| HaeIII | GGCC | 8 cut(s) | 6, 710, 751, 916, 1133, 1543, 1799, 2259 |
| HapII | CCGG | 6 cut(s) | 126, 1165, 2260, 2969, 3509, 4449 |
| HgaI | GACGC | 4 cut(s) | 15, 143, 3477, 3711 |
| HhaI | GCGC | 5 cut(s) | 823, 1222, 2106, 3998, 4379 |
| Hin1I | GRCGYC | 2 cut(s) | 3469, 3722 |
| Hin6I | GCGC | 5 cut(s) | 821, 1220, 2104, 3996, 4377 |
| HinP1I | GCGC | 5 cut(s) | 821, 1220, 2104, 3996, 4377 |
| HincII | GTYRAC | 3 cut(s) | 880, 1273, 3342 |
| HindII | GTYRAC | 3 cut(s) | 880, 1273, 3342 |
| HindIII | AAGCTT | 3 cut(s) | 2651, 3024, 3477 |
| HpaI | GTTAAC | 1 cut(s) | 880 |
| HpaII | CCGG | 6 cut(s) | 126, 1165, 2260, 2969, 3509, 4449 |
| Hpy166II | GTNNAC | 9 cut(s) | 319, 645, 880, 1273, 3216, 3342, 3700, 3751, 4320 |
| Hpy8I | GTNNAC | 9 cut(s) | 319, 645, 880, 1273, 3216, 3342, 3700, 3751, 4320 |
| Hpy99I | CGWCG | 1 cut(s) | 862 |
| HpyCH4IV | ACGT | 6 cut(s) | 1233, 1564, 3586, 3696, 3942, 4816 |
| HpySE526I | ACGT | 6 cut(s) | 1233, 1564, 3586, 3696, 3942, 4816 |
| Hsp92I | GRCGYC | 2 cut(s) | 3469, 3722 |
| HspAI | GCGC | 5 cut(s) | 821, 1220, 2104, 3996, 4377 |
| Kpn2I | TCCGGA | 1 cut(s) | 125 |
| Ksp22I | TGATCA | 2 cut(s) | 1608, 3442 |
| KspAI | GTTAAC | 1 cut(s) | 880 |
| KspI | CCGCGG | 1 cut(s) | 912 |
| LguI | GCTCTTC | 2 cut(s) | 2322, 3178 |
| MaeII | ACGT | 6 cut(s) | 1233, 1564, 3586, 3696, 3942, 4816 |
| MfeI | CAATTG | 1 cut(s) | 3850 |
| MflI | RGATCY | 6 cut(s) | 325, 715, 1321, 2058, 2239, 3949 |
| MlyI | GAGTC | 9 cut(s) | 257, 544, 544, 857, 1072, 1196, 1819, 3794, 4310 |
| MmeI | TCCRAC | 4 cut(s) | 132, 840, 1457, 2694 |
| Mph1103I | ATGCAT | 3 cut(s) | 1206, 1438, 1736 |
| MroI | TCCGGA | 1 cut(s) | 125 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1031, 2162, 3654 |
| MslI | CAYNNNNRTG | 8 cut(s) | 420, 650, 945, 1071, 1729, 2630, 3416, 4692 |
| MspA1I | CMGCKG | 5 cut(s) | 556, 911, 971, 3742, 4290 |
| MspCI | CTTAAG | 2 cut(s) | 1058, 2206 |
| MspI | CCGG | 6 cut(s) | 126, 1165, 2260, 2969, 3509, 4449 |
| MspR9I | CCNGG | 5 cut(s) | 596, 745, 1862, 3302, 4306 |
| MunI | CAATTG | 1 cut(s) | 3850 |
| Mva1269I | GAATGC | 2 cut(s) | 182, 952 |
| MvaI | CCWGG | 5 cut(s) | 596, 745, 1862, 3302, 4306 |
| MvnI | CGCG | 3 cut(s) | 26, 911, 1520 |
| NcoI | CCATGG | 1 cut(s) | 1307 |
| NdeI | CATATG | 3 cut(s) | 1096, 1200, 2452 |
| NheI | GCTAGC | 1 cut(s) | 2794 |
| NlaIV | GGNNCC | 9 cut(s) | 81, 717, 915, 964, 2071, 3310, 3556, 4032, 4620 |
| NmeAIII | GCCGAG | 1 cut(s) | 736 |
| NsbI | TGCGCA | 2 cut(s) | 822, 2105 |
| NsiI | ATGCAT | 3 cut(s) | 1206, 1438, 1736 |
| NspI | RCATGY | 6 cut(s) | 2716, 3670, 4236, 4377, 4505, 4539 |
| NspV | TTCGAA | 1 cut(s) | 1348 |
| OliI | CACNNNNGTG | 1 cut(s) | 1071 |
| PaeR7I | CTCGAG | 1 cut(s) | 2820 |
| PagI | TCATGA | 1 cut(s) | 1639 |
| PceI | AGGCCT | 2 cut(s) | 751, 1799 |
| PciI | ACATGT | 3 cut(s) | 4232, 4501, 4535 |
| PciSI | GCTCTTC | 2 cut(s) | 2322, 3178 |
| PctI | GAATGC | 2 cut(s) | 182, 952 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1031, 2162, 3654 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3943 |
| PfoI | TCCNGGA | 2 cut(s) | 594, 743 |
| PinAI | ACCGGT | 1 cut(s) | 4448 |
| Ple19I | CGATCG | 1 cut(s) | 1518 |
| PleI | GAGTC | 9 cut(s) | 257, 543, 544, 856, 1071, 1195, 1818, 3793, 4309 |
| PmaCI | CACGTG | 1 cut(s) | 3943 |
| PmlI | CACGTG | 1 cut(s) | 3943 |
| PpsI | GAGTC | 9 cut(s) | 257, 543, 544, 856, 1071, 1195, 1818, 3793, 4309 |
| Ppu21I | YACGTR | 2 cut(s) | 3587, 3943 |
| PpuMI | RGGWCCY | 1 cut(s) | 2069 |
| PscI | ACATGT | 3 cut(s) | 4232, 4501, 4535 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1863 |
| PshBI | ATTAAT | 1 cut(s) | 1848 |
| Psp124BI | GAGCTC | 2 cut(s) | 606, 3797 |
| Psp5II | RGGWCCY | 1 cut(s) | 2069 |
| Psp6I | CCWGG | 5 cut(s) | 594, 743, 1860, 3300, 4304 |
| PspCI | CACGTG | 1 cut(s) | 3943 |
| PspEI | GGTNACC | 1 cut(s) | 1856 |
| PspGI | CCWGG | 5 cut(s) | 594, 743, 1860, 3300, 4304 |
| PspN4I | GGNNCC | 9 cut(s) | 81, 717, 915, 964, 2071, 3310, 3556, 4032, 4620 |
| PspPI | GGNCC | 6 cut(s) | 4, 128, 914, 2069, 2657, 4618 |
| PspPPI | RGGWCCY | 1 cut(s) | 2069 |
| PspXI | VCTCGAGB | 1 cut(s) | 2820 |
| PstI | CTGCAG | 3 cut(s) | 1785, 2229, 2587 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2999, 4200 |
| PsuI | RGATCY | 6 cut(s) | 325, 715, 1321, 2058, 2239, 3949 |
| PvuI | CGATCG | 1 cut(s) | 1518 |
| PvuII | CAGCTG | 2 cut(s) | 556, 4290 |
| RsaI | GTAC | 7 cut(s) | 467, 3701, 4119, 4204, 4319, 4607, 4718 |
| RsaNI | GTAC | 7 cut(s) | 466, 3700, 4118, 4203, 4318, 4606, 4717 |
| RseI | CAYNNNNRTG | 8 cut(s) | 420, 650, 945, 1071, 1729, 2630, 3416, 4692 |
| SacI | GAGCTC | 2 cut(s) | 606, 3797 |
| SacII | CCGCGG | 1 cut(s) | 912 |
| SalI | GTCGAC | 1 cut(s) | 1271 |
| SapI | GCTCTTC | 2 cut(s) | 2322, 3178 |
| Sau96I | GGNCC | 6 cut(s) | 4, 128, 914, 2069, 2657, 4618 |
| SbfI | CCTGCAGG | 1 cut(s) | 1785 |
| ScaI | AGTACT | 1 cut(s) | 4119 |
| SchI | GAGTC | 9 cut(s) | 257, 544, 544, 857, 1072, 1196, 1819, 3794, 4310 |
| ScrFI | CCNGG | 5 cut(s) | 596, 745, 1862, 3302, 4306 |
| SdaI | CCTGCAGG | 1 cut(s) | 1785 |
| SfcI | CTRYAG | 7 cut(s) | 1781, 1989, 2225, 2583, 4285, 4512, 4545 |
| Sfr274I | CTCGAG | 1 cut(s) | 2820 |
| Sfr303I | CCGCGG | 1 cut(s) | 912 |
| SfuI | TTCGAA | 1 cut(s) | 1348 |
| SgrBI | CCGCGG | 1 cut(s) | 912 |
| SinI | GGWCC | 4 cut(s) | 128, 2069, 2657, 4618 |
| SlaI | CTCGAG | 1 cut(s) | 2820 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 420, 650, 945, 1071, 1729, 2630, 3416, 4692 |
| SmlI | CTYRAG | 4 cut(s) | 1058, 2153, 2206, 2820 |
| SmoI | CTYRAG | 4 cut(s) | 1058, 2153, 2206, 2820 |
| SnaBI | TACGTA | 1 cut(s) | 3587 |
| SpeI | ACTAGT | 1 cut(s) | 2462 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1785 |
| SseBI | AGGCCT | 2 cut(s) | 751, 1799 |
| SspI | AATATT | 1 cut(s) | 1622 |
| SstI | GAGCTC | 2 cut(s) | 606, 3797 |
| StuI | AGGCCT | 2 cut(s) | 751, 1799 |
| StyD4I | CCNGG | 5 cut(s) | 594, 743, 1860, 3300, 4304 |
| StyI | CCWWGG | 4 cut(s) | 660, 1307, 2862, 3703 |
| TaiI | ACGT | 6 cut(s) | 1236, 1567, 3589, 3699, 3945, 4819 |
| TaqII | GACCGA | 1 cut(s) | 3542 |
| TatI | WGTACW | 3 cut(s) | 4117, 4202, 4317 |
| TauI | GCSGC | 1 cut(s) | 911 |
| TspGWI | ACGGA | 2 cut(s) | 1577, 3931 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3943 |
| Vha464I | CTTAAG | 2 cut(s) | 1058, 2206 |
| VneI | GTGCAC | 1 cut(s) | 3214 |
| VpaK11BI | GGWCC | 4 cut(s) | 128, 2069, 2657, 4618 |
| VspI | ATTAAT | 1 cut(s) | 1848 |
| XapI | RAATTY | 8 cut(s) | 680, 1031, 1369, 1385, 1775, 2282, 3886, 4384 |
| XceI | RCATGY | 6 cut(s) | 2716, 3670, 4236, 4377, 4505, 4539 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2432, 4250 |
| XhoI | CTCGAG | 1 cut(s) | 2820 |
| XmiI | GTMKAC | 2 cut(s) | 318, 1272 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1031, 2162, 3654 |
| ZrmI | AGTACT | 1 cut(s) | 4119 |
| Zsp2I | ATGCAT | 3 cut(s) | 1206, 1438, 1736 |