FvH4_5g15740

Protein of unknown function (DUF627)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
8909239 .. 8917663
8425 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15740.t1

Sequence Viewer

Length: 4908 bp
ATGGGGCACAAGAAGCGAAACGCCGCTCCGCGTTCCAAACAGTCGCCGGCGGCGGTTGCGCCGATTGTCGACGGGGGCGACGCCGTCGTCTTGGCCCAGCCCGGTGCTGCTCCGCTCACTCTGGCCGACGCCGAGGCCAATAGTCCTAACAGCAGCCTGGTAGTCCTCCACAACAAGATCGAATCCTCGCCGTCGATCGAATCGGGCGTGTTTGATTCGGAGTCTTCCGCCGCCGCGAAGCTCGAATGCGAGCGGGCGCTGACGGCGCTCCGCCGCGGGAACCACAACAAGGCGTTGCGGCTGATGAAGGAGTCGTGCCAGAAGCACGAGAATTCGGCTCACTCGGCTCTGATTCACCGAGTCCAGGGCACTGTGTGCGTCAAGGTCGCGTCGATTATCGACGACCCGAACGCGAAGCAGCGGCATTTGAGGAACGCGGCGGAGTCTGCGCGGCGGGCGGTGGAGCTGTCGCCGAACTCGATCGAGTTCGCGCATTTCTACGCCAATTTGCTATACGAGGCGGCCAACGACGGCAAGGAGTATGATGAAGTGGTGGCGGAGTGCGAGAGGGCTCTGGCGATTGAGAAGCCTGTTGATCCTGCTAAAGAGAGCTTGCAGGAGGAGAGCCAGCAGAAGCTGCCCACCGCCGAGGCTCGAATTGGCCACGTCCAGAATGAGCTCAGGCAACTGATTCAGAAGTCTAACATTGCCTCAATTTCGACGTGGATGAAGAATTTGGGGACCGGAGAAGAGAAGTTTAGGCTAATTCCGATTCGGAGGGTCACCGAGGACCCCATGGAGGTGAGGCTGGTGCAAACTAGGCGGCCGAATGAGATTAAGAAGGCTACTAAGACTCCGGAAGAGAGACGAAAGGAGATTGAAGTGAGGGTTGCGGCTGCCAGGCTTTTGCAGCAGAAGTCTGAGGTGCCTCAGCTGAACAATGAGAGTGAGAAGAGTGACAGGGGAGTGGATTCGTTGTCGGGGTCCGGTCAGAGAGGTAGTGAGAGAAGGAAGCATGGGGGTTTGAGGAAAAATGGGTCCTCATCGGAGAGGAAGGATTGGGTTAGGTCGTATTGGAAATCAATGAGTGTTGATATGAAGAAAGAGTTACTTAGGATTAGAGTTAGTGATCTTAAAGCCAAGTTTAGCTCGTCCAAGGATGGCTTGGCGAATGAGGTTTTATCAGAGGCAGTGGCGTTTGCAGAGAGTAGTAGGAGTTGGAACTACTGGGTTTGTTGTAGATGTAATGAGAAATTCGTGGATCCTGAATCACATATGCACCATGTTGTGAATGAACATATGGGAAACCTTATGCCAAAAATGCAGTCAGTTTTGCCACCAAATGTTGACAATGAATGGATTGAGATGCTTCTCACTTGTTCATGGAAACCACTGGATGTCTCTGCTGCTATTAGAATGCTTAGAGATCAAAGAAAATGCAGAGACCCTGAGCTTGTTGAGGATTTCTACTCTGGGAATCATAACAAGGAGTGTGAGGATTGTTTCAAAGATGCTTGGGATGAATCGCCTGAGAAGGAAATTATTGGAGATGGTCCTAGTAATTGTACTGTTGATGGCAATATCCATGAGCAGGTTGACCACGTTGAGTGTACAGAATGTGATGAGGACAATGGTCCTATTGCTTACTCTTCTCTACCAGGCGGTTGGCCGTTATCTGATGACCCTGAACGTATGAAGCTTCTTGAAAGAATTCATGCCTCATTTGAGGTGCTTATCAGGCACAAATATCTTGCTGCTACTCATCTTAACAGGGTGATACAATTTACGATGGATAAGCTACAGACTTCTGAGCTTCTTAACCATGGTGTGGAACAAACACCTATGTGCATTTGCTTCTTGGGAGCTACACATCTTACGAAAATCCTCAAATTCTTGCAGGATCTGTCCCATGCTTGTGGTTTAGGTAGATACTCTGAGAAAAGTAGCTGTGCTATGGATGATGGAAATAACACGAATCAGGGTGTTGAGTTGATTAAAGAGAGGATTATTCTCAGCGGAGATGCCTCCTGCCTTCTTTTGGACATTTCTGATTGTACATCTAGTGCTGGGAATGGAACCCCTACTGATGGAACTGGGCTTCTTTCTGATTCCGATGCTCTGCTGTCCTGGATATTTGCAGGCCCATCTAGTGCTGAACAGTTGACATCCTGGATGCAGACAAAAGAAGAGAAAACACAACAAGGGATGGAAATTCTCCAGATGCTTGAAAAGGAGTTTTACCACCTGCAGAGTCTTTGTGAGAGAAAATGTGAGCATTTAAAATATGAAGAAGCTTTGCAGGCAGTTGAGGATCTTTGTGTTGAAGAAGGAAAAAAGAGAGAAAATGCCACAGAATTTTCCAATCGAAGCTATGAGTATGTGCTAAGGAAGAGGAAAGAAGAGCTTGAGAGAGAGAATGATATGATGTTCAATGCAAGTAGGATTGACTTGGATGCCATAACAAATGTTTTAAGAGACTACCAGTTCGGGTATGAGGAAACTTATGGTGGCGTGACTTCTCAGTTATATGATTTGGAATCCGGGGAAGATGATGACTGGAGAGCCAAGGATTATCTGCATCAGGTAATCCAGACACAGAAAGAACAATTATATGTAGAGCTTAGCAAAATTGATGCACGGATTATGCGAAATGTTACTGGGATGCAGCAATTGGAAGTTAAGCTTGAACCTGTCTCCGCCCATGATTATCGGTCAATAGTCTTGCCTTTAGTGAAGTCCTACCTTCGGGCACATTTGGAGGATCTGGCTGAGAAAGATGCCACTGAAAAGTCAGATGCTGCTAGAGAGGCTTTTTTGGCAGAACTTGCACTTGATTCTAAGAAAGGTGTCAAAGGAGGAAATGATAATGCGAGACACACACAGGAGAAAGTGAAGGATAAGAAGAAGAATAAGGAGTATAGGAAAGCAAAAGATACAAAGGGTAATGGTCTTTCAGATGAGCACATGCATCATGATGAGTCTGCCGAGCATTCCTGTCCAGTCGCATCTTATGGTGACCCTCTAGATTCTGAGCTTGTTGTTTCTGTAAATGGTGATGACTTGAAGCAACAGGACGAGGAATCTAGACGTAGAATTGAACTCGAGGAAGAGGAAAGAAAGCTTGAAGAAACTTTGGAGTATCAGAGACAAATTGAGAAGGAAGCTAAGCAGAAGCAGCTTGCTGAGCAAAATAAGAAATCTACTCAAACACATCCGGATAAAGTGGCAGAGAAACTGCAGGATGTTAATTTGGAGCCTTGTGCCAATGATCAAGATATGCACGAGCCACTTAAGCCATATGTGCAGGACCACTTGGTACAGAAGACGGGATCTCCTAACAATCTAGAAGGCGTGCCCATTAACATGGCAAATGGTTCTCCAGCGTCACTAAAAGCTTCCACTGTTTCTGGTCCTCAAATGATTAATGGTGCACAAGATAAAGTTCACCCAGGAATACCTAATGGAGGAATTCTCGAGGATGGTTATCCGCCTTCTGATCGACGGACAGGAAGGAAAAATAGAAGGCAGAGAAGTTCCACTAAAGTGCCTGACGGAAAGAGTCAAGCCTTGTTATCTGAAAGGGAAAATATTGAAGCTGGGAGGTCAAATGTCGAGAGTCATCTAAGTACACATGTTCAATCCAATGACTATCTCCTTGCAGAGAGCAACAAGGGAACAAGGGAATTGAGACAGCAACATGCAGAGGAAGATGATGAAGAAAGGTTCCAGGCCGACCTTAAAAAGGCCGTACGCCAAAGCCTTGACACATTCCAAGAACAACGAAAATGTCCTTTAGTTTCAAGTTTGAGGACACCCAAAAGGATTTCTGCAGATTTTGATAAAGGTGGTGTTTTACATAATGAGATCAGAGTTGAAACTGCAAGTGATATCGATGTCCTGGGTACTGGGTTAAAGAATGAAGTCGGTGAATACAACTGCTTTCTTAATGTTATTATACAGTCCTTGTGGCATATTAAACTATTCCGAGATGAGTTCCTGCAAAGATCAACATCAGTACATGTTCATGTGGGGGATCCATGTGTGATCTGTGCATTGTACGAAATATTTACTGCCTTGAGTAATGCATCTACGGATACGCGAAGAGAAGCAGTTGCGCCTACTTCTTTAAGAATAGCTTTAAGCAACCTGTATCCAGAAAGTAATTTCTTCCAGGAGGCTCAGATGAATGATGCATCTGAAGTATTGGGAGTGATATTTGACTGTCTTCACCGGTCATTTACCCCTTGTTTGAGTGTTTCTGATACTGAATCTGTGGAAAGTAACTGCCTGGGGTCTTGGGATTGTTCAAACAATGCTTGTATTGTGCACTCCATGTTCGGAATGAACATTTTTGAACGAATGAATTGCTATAATTGTGGTTTGGAGTCCAGACATCTCAAGTATACTTCCTTTTTTCACAATATAAATGCCAGTGCTCTCCGTACTATGAAGGTTATGTGTGCAGAAAGCTCCTTTGACGAGCTTTTGAATCTTGTGGAGATGAATCATCAGCTGGCCTGTGATCCCGAGGCTGGGGGCTGCGGGAAGCTCAACTATATCCATCACATTCTTTCAACTCCACCACATGTTTTCACAACAGTTATGGGTTGGCAGAATACGTGTGAGAGTGCTGAGGATATAAAAGCAACACTGGCAGCTCTAAATACTGAGATAGATATAAGTGTCCTTTACCGTGGTCTGGATCCAAAGAGCACGCATAACTTGGTTTCTGTGGTATGCTACTATGGGCAACATTACCATTGCTTTGCTTATAGTCATGAGCGTGAATGCTGGGTTATGTATGATGATAATACTGTCAAGGTGATTGGCGGGTGGGCTGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCGCAAGTTCTATTTTTTGAAGCTGTAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1636

Amino Acids

184.02

Weight (kDa)

5.48

Isoelectric Point (pI)

53.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF627 PF04781 86 - 195 1.1e-30 Protein of unknown function (DUF627)
DUF629 PF04780 355 - 862 1.2e-139 Protein of unknown function (DUF629)
UCH PF00443 1303 - 1630 1.1e-29 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2253
AasI GACNNNNNNGTC 1 cut(s) 86
Acc36I ACCTGC 2 cut(s) 1582, 2253
AccB1I GGYRCC 1 cut(s) 925
AccB7I CCANNNNNTGG 1 cut(s) 1828
AccBSI CCGCTC 3 cut(s) 26, 115, 253
AccI GTMKAC 2 cut(s) 69, 4403
AccII CGCG 9 cut(s) 31, 236, 276, 389, 413, 437, 451, 491, 4099
AccIII TCCGGA 2 cut(s) 856, 3214
AcoI YGGCCR 5 cut(s) 123, 522, 661, 824, 1667
AcsI RAATTY 8 cut(s) 331, 733, 1253, 1710, 1889, 2211, 2354, 3468
AcuI CTGAAG 1 cut(s) 4218
AcyI GRCGYC 2 cut(s) 81, 129
AdeI CACNNNGTG 1 cut(s) 375
AflII CTTAAG 1 cut(s) 3290
AflIII ACRYGT 4 cut(s) 3631, 4018, 4585, 4619
AgeI ACCGGT 1 cut(s) 4230
AjiI CACGTC 2 cut(s) 667, 723
AleI CACNNNNGTG 2 cut(s) 1843, 3542
Alw21I GWGCWC 6 cut(s) 681, 2964, 3433, 4329, 4438, 4715
Alw26I GTCTC 8 cut(s) 859, 1405, 1437, 2469, 2698, 2866, 3139, 3682
Alw44I GTGCAC 2 cut(s) 3429, 4325
AlwNI CAGNNNCTG 3 cut(s) 637, 1903, 2798
Ama87I CYCGRG 3 cut(s) 3101, 3473, 4526
Aor13HI TCCGGA 2 cut(s) 856, 3214
ApaLI GTGCAC 2 cut(s) 3429, 4325
ApoI RAATTY 8 cut(s) 331, 733, 1253, 1710, 1889, 2211, 2354, 3468
ArsI GACNNNNNNTTYG 4 cut(s) 1310, 1342, 2468, 2500
AseI ATTAAT 1 cut(s) 3423
AsiGI ACCGGT 1 cut(s) 4230
Asp700I GAANNNNTTC 1 cut(s) 1710
AspLEI GCGC 6 cut(s) 61, 259, 268, 451, 493, 4117
AsuC2I CCSGG 2 cut(s) 102, 2542
AvaI CYCGRG 3 cut(s) 3101, 3473, 4526
AvaII GGWCC 8 cut(s) 741, 790, 984, 1038, 1553, 1634, 3307, 3410
BaeGI GKGCMC 6 cut(s) 9, 371, 2752, 3357, 3433, 4329
BalI TGGCCA 1 cut(s) 663
BamHI GGATCC 3 cut(s) 1261, 4033, 4702
BanI GGYRCC 1 cut(s) 925
BanII GRGCYC 2 cut(s) 574, 681
BauI CACGAG 2 cut(s) 326, 3281
BbsI GAAGAC 3 cut(s) 216, 3329, 4217
Bbv12I GWGCWC 6 cut(s) 681, 2964, 3433, 4329, 4438, 4715
BbvCI CCTCAGC 2 cut(s) 930, 4632
BceAI ACGGC 6 cut(s) 68, 175, 279, 547, 1654, 3731
BcgI CGANNNNNNTGC 2 cut(s) 4347, 4381
BciVI GTATCC 2 cut(s) 4087, 4161
BclI TGATCA 1 cut(s) 3268
BcnI CCSGG 2 cut(s) 102, 2542
BcoDI GTCTC 8 cut(s) 859, 1405, 1437, 2469, 2698, 2866, 3139, 3682
BfaI CTAG 9 cut(s) 819, 1557, 2061, 2148, 2802, 3023, 3084, 3344, 4906
BfmI CTRYAG 4 cut(s) 1799, 2246, 3236, 3828
BfoI RGCGCY 2 cut(s) 260, 269
BfrI CTTAAG 1 cut(s) 3290
BfuAI ACCTGC 2 cut(s) 1582, 2253
BfuI GTATCC 2 cut(s) 4087, 4161
BlpI GCTNAGC 3 cut(s) 2621, 3165, 3183
Bme18I GGWCC 8 cut(s) 741, 790, 984, 1038, 1553, 1634, 3307, 3410
BmeT110I CYCGRG 3 cut(s) 3101, 3473, 4526
BmgBI CACGTC 2 cut(s) 667, 723
BmrI ACTGGG 4 cut(s) 1237, 2103, 2667, 3915
BmuI ACTGGG 4 cut(s) 1237, 2103, 2667, 3915
BoxI GACNNNNGTC 1 cut(s) 1632
BpiI GAAGAC 3 cut(s) 216, 3329, 4217
BplI GAGNNNNNCTC 2 cut(s) 3456, 3488
BpmI CTGGAG 3 cut(s) 2201, 2578, 3363
Bpu10I CCTNAGC 5 cut(s) 680, 930, 1449, 2384, 4632
Bpu1102I GCTNAGC 3 cut(s) 2621, 3165, 3183
BpuEI CTTGAG 3 cut(s) 2426, 4096, 4382
BpuMI CCSGG 2 cut(s) 102, 2542
Bsa29I ATCGAT 1 cut(s) 3891
BsaAI YACGTR 1 cut(s) 4620
BsaBI GATNNNNATC 2 cut(s) 3483, 4009
BsaHI GRCGYC 2 cut(s) 81, 129
BsaI GGTCTC 1 cut(s) 1437
BsaWI WCCGGW 5 cut(s) 743, 856, 986, 3214, 4230
BsaXI ACNNNNNCTCC 4 cut(s) 838, 868, 3316, 3346
Bse118I RCCGGY 2 cut(s) 46, 4230
Bse3DI GCAATG 2 cut(s) 705, 4759
Bse8I GATNNNNATC 2 cut(s) 3483, 4009
BseAI TCCGGA 2 cut(s) 856, 3214
BseCI ATCGAT 1 cut(s) 3891
BseJI GATNNNNATC 2 cut(s) 3483, 4009
BseMI GCAATG 2 cut(s) 705, 4759
BseRI GAGGAG 1 cut(s) 635
BseSI GKGCMC 6 cut(s) 9, 371, 2752, 3357, 3433, 4329
BseX3I CGGCCG 1 cut(s) 824
BseYI CCCAGC 5 cut(s) 96, 2066, 3596, 4532, 4791
BsgI GTGCAG 2 cut(s) 3323, 4482
Bsh1236I CGCG 9 cut(s) 31, 236, 276, 389, 413, 437, 451, 491, 4099
Bsh1285I CGRYCG 3 cut(s) 198, 483, 827
BshNI GGYRCC 1 cut(s) 925
BshTI ACCGGT 1 cut(s) 4230
BshVI ATCGAT 1 cut(s) 3891
BsiEI CGRYCG 3 cut(s) 198, 483, 827
BsiHKAI GWGCWC 6 cut(s) 681, 2964, 3433, 4329, 4438, 4715
BsiHKCI CYCGRG 3 cut(s) 3101, 3473, 4526
BsiSI CCGG 8 cut(s) 47, 102, 744, 857, 987, 2541, 3215, 4231
BsiWI CGTACG 1 cut(s) 3748
BslFI GGGAC 2 cut(s) 754, 1891
BsmAI GTCTC 8 cut(s) 859, 1405, 1437, 2469, 2698, 2866, 3139, 3682
BsmBI CGTCTC 1 cut(s) 859
BsmFI GGGAC 2 cut(s) 754, 1891
BsmI GAATGC 4 cut(s) 251, 1422, 2989, 4793
Bso31I GGTCTC 1 cut(s) 1437
BsoBI CYCGRG 3 cut(s) 3101, 3473, 4526
Bsp13I TCCGGA 2 cut(s) 856, 3214
Bsp1407I TGTACA 2 cut(s) 1610, 2054
Bsp1720I GCTNAGC 3 cut(s) 2621, 3165, 3183
Bsp19I CCATGG 2 cut(s) 795, 1822
BspDI ATCGAT 1 cut(s) 3891
BspEI TCCGGA 2 cut(s) 856, 3214
BspFNI CGCG 9 cut(s) 31, 236, 276, 389, 413, 437, 451, 491, 4099
BspHI TCATGA 2 cut(s) 2971, 4777
BspMAI CTGCAG 3 cut(s) 2250, 3240, 3832
BspMI ACCTGC 2 cut(s) 1582, 2253
BspQI GCTCTTC 1 cut(s) 2394
BspT107I GGYRCC 1 cut(s) 925
BspTI CTTAAG 1 cut(s) 3290
BspTNI GGTCTC 1 cut(s) 1437
BsrBI CCGCTC 3 cut(s) 26, 115, 253
BsrDI GCAATG 2 cut(s) 705, 4759
BsrFI RCCGGY 2 cut(s) 46, 4230
BsrGI TGTACA 2 cut(s) 1610, 2054
BssAI RCCGGY 2 cut(s) 46, 4230
BssNAI GTATAC 1 cut(s) 4404
BssNI GRCGYC 2 cut(s) 81, 129
BssSI CACGAG 2 cut(s) 326, 3281
BssT1I CCWWGG 4 cut(s) 795, 1155, 1822, 2565
Bst1107I GTATAC 1 cut(s) 4404
Bst2BI CACGAG 2 cut(s) 326, 3281
Bst6I CTCTTC 9 cut(s) 744, 855, 947, 1654, 2181, 2384, 2394, 3102, 4096
BstACI GRCGYC 2 cut(s) 81, 129
BstAFI CTTAAG 1 cut(s) 3290
BstAPI GCANNNNNTGC 3 cut(s) 375, 637, 2825
BstAUI TGTACA 2 cut(s) 1610, 2054
BstBAI YACGTR 1 cut(s) 4620
BstDSI CCRYGG 4 cut(s) 274, 795, 1822, 4693
BstEII GGTNACC 2 cut(s) 781, 3014
BstENI CCTNNNNNAGG 2 cut(s) 3462, 3740
BstFNI CGCG 9 cut(s) 31, 236, 276, 389, 413, 437, 451, 491, 4099
BstH2I RGCGCY 2 cut(s) 260, 269
BstHHI GCGC 6 cut(s) 61, 259, 268, 451, 493, 4117
BstMAI GTCTC 8 cut(s) 859, 1405, 1437, 2469, 2698, 2866, 3139, 3682
BstMCI CGRYCG 3 cut(s) 198, 483, 827
BstNSI RCATGY 5 cut(s) 2968, 3635, 3701, 4022, 4589
BstPAI GACNNNNGTC 1 cut(s) 1632
BstPI GGTNACC 2 cut(s) 781, 3014
BstSFI CTRYAG 4 cut(s) 1799, 2246, 3236, 3828
BstSLI GKGCMC 6 cut(s) 9, 371, 2752, 3357, 3433, 4329
BstUI CGCG 9 cut(s) 31, 236, 276, 389, 413, 437, 451, 491, 4099
BstV2I GAAGAC 3 cut(s) 216, 3329, 4217
BstX2I RGATCY 7 cut(s) 1261, 1900, 2311, 2761, 3329, 4033, 4702
BstXI CCANNNNNNTGG 3 cut(s) 1665, 1916, 3364
BstYI RGATCY 7 cut(s) 1261, 1900, 2311, 2761, 3329, 4033, 4702
BstZ17I GTATAC 1 cut(s) 4404
BstZI CGGCCG 1 cut(s) 824
Bsu15I ATCGAT 1 cut(s) 3891
BsuI GTATCC 2 cut(s) 4087, 4161
BsuTUI ATCGAT 1 cut(s) 3891
BtgI CCRYGG 4 cut(s) 274, 795, 1822, 4693
BtrI CACGTC 2 cut(s) 667, 723
BtsI GCAGTG 1 cut(s) 1197
BtsIMutI CAGTG 7 cut(s) 369, 1197, 1391, 2781, 3399, 4438, 4649
BveI ACCTGC 2 cut(s) 1582, 2253
CaiI CAGNNNCTG 3 cut(s) 637, 1903, 2798
CciI TCATGA 2 cut(s) 2971, 4777
CfoI GCGC 6 cut(s) 61, 259, 268, 451, 493, 4117
Cfr10I RCCGGY 2 cut(s) 46, 4230
Cfr42I CCGCGG 1 cut(s) 277
ClaI ATCGAT 1 cut(s) 3891
CseI GACGC 5 cut(s) 89, 137, 367, 378, 3372
CspAI ACCGGT 1 cut(s) 4230
DraI TTTAAA 1 cut(s) 2280
DraIII CACNNNGTG 1 cut(s) 375
DrdI GACNNNNNNGTC 1 cut(s) 86
DseDI GACNNNNNNGTC 1 cut(s) 86
EaeI YGGCCR 5 cut(s) 123, 522, 661, 824, 1667
EagI CGGCCG 1 cut(s) 824
Eam1104I CTCTTC 9 cut(s) 744, 855, 947, 1654, 2181, 2384, 2394, 3102, 4096
EarI CTCTTC 9 cut(s) 744, 855, 947, 1654, 2181, 2384, 2394, 3102, 4096
EciI GGCGGA 6 cut(s) 217, 260, 455, 572, 2686, 3477
Ecl136II GAGCTC 1 cut(s) 679
EclXI CGGCCG 1 cut(s) 824
Eco130I CCWWGG 4 cut(s) 795, 1155, 1822, 2565
Eco24I GRGCYC 2 cut(s) 574, 681
Eco31I GGTCTC 1 cut(s) 1437
Eco32I GATATC 1 cut(s) 3889
Eco47I GGWCC 8 cut(s) 741, 790, 984, 1038, 1553, 1634, 3307, 3410
Eco52I CGGCCG 1 cut(s) 824
Eco53kI GAGCTC 1 cut(s) 679
Eco57I CTGAAG 1 cut(s) 4218
Eco88I CYCGRG 3 cut(s) 3101, 3473, 4526
Eco91I GGTNACC 2 cut(s) 781, 3014
EcoICRI GAGCTC 1 cut(s) 679
EcoNI CCTNNNNNAGG 2 cut(s) 3462, 3740
EcoO109I RGGNCCY 2 cut(s) 790, 1038
EcoO65I GGTNACC 2 cut(s) 781, 3014
EcoRI GAATTC 3 cut(s) 331, 1710, 3468
EcoRV GATATC 1 cut(s) 3889
EcoT14I CCWWGG 4 cut(s) 795, 1155, 1822, 2565
EcoT22I ATGCAT 3 cut(s) 2970, 4087, 4195
EcoT38I GRGCYC 2 cut(s) 574, 681
ErhI CCWWGG 4 cut(s) 795, 1155, 1822, 2565
Esp3I CGTCTC 1 cut(s) 859
FaqI GGGAC 2 cut(s) 754, 1891
FauI CCCGC 5 cut(s) 246, 269, 447, 4535, 4823
FauNDI CATATG 3 cut(s) 1275, 1299, 3298
FbaI TGATCA 1 cut(s) 3268
FblI GTMKAC 2 cut(s) 69, 4403
FriOI GRGCYC 2 cut(s) 574, 681
FspBI CTAG 9 cut(s) 819, 1557, 2061, 2148, 2802, 3023, 3084, 3344, 4906
GlaI GCGC 6 cut(s) 60, 258, 267, 450, 492, 4116
GsaI CCCAGC 5 cut(s) 100, 2070, 3600, 4536, 4795
GsuI CTGGAG 3 cut(s) 2201, 2578, 3363
HaeII RGCGCY 2 cut(s) 260, 269
HapII CCGG 8 cut(s) 47, 102, 744, 857, 987, 2541, 3215, 4231
HgaI GACGC 5 cut(s) 89, 137, 367, 378, 3372
HhaI GCGC 6 cut(s) 61, 259, 268, 451, 493, 4117
Hin1I GRCGYC 2 cut(s) 81, 129
Hin6I GCGC 6 cut(s) 59, 257, 266, 449, 491, 4115
HinP1I GCGC 6 cut(s) 59, 257, 266, 449, 491, 4115
HincII GTYRAC 4 cut(s) 70, 1348, 1597, 2163
HindII GTYRAC 4 cut(s) 70, 1348, 1597, 2163
HindIII AAGCTT 5 cut(s) 1697, 2292, 2681, 3119, 3393
HpaII CCGG 8 cut(s) 47, 102, 744, 857, 987, 2541, 3215, 4231
HpyCH4IV ACGT 6 cut(s) 666, 722, 1602, 1690, 3088, 4619
HpySE526I ACGT 6 cut(s) 666, 722, 1602, 1690, 3088, 4619
Hsp92I GRCGYC 2 cut(s) 81, 129
HspAI GCGC 6 cut(s) 59, 257, 266, 449, 491, 4115
Kpn2I TCCGGA 2 cut(s) 856, 3214
KroI GCCGGC 1 cut(s) 46
KroNI GCCGGC 1 cut(s) 48
Ksp22I TGATCA 1 cut(s) 3268
KspI CCGCGG 1 cut(s) 277
LguI GCTCTTC 1 cut(s) 2394
LmnI GCTCC 7 cut(s) 31, 115, 273, 463, 1862, 3253, 4475
MaeI CTAG 9 cut(s) 819, 1557, 2061, 2148, 2802, 3023, 3084, 3344, 4906
MaeII ACGT 6 cut(s) 666, 722, 1602, 1690, 3088, 4619
MaeIII GTNAC 8 cut(s) 781, 956, 1107, 2512, 2653, 3014, 3384, 4280
MbiI CCGCTC 3 cut(s) 26, 115, 253
MfeI CAATTG 1 cut(s) 2669
MflI RGATCY 7 cut(s) 1261, 1900, 2311, 2761, 3329, 4033, 4702
MlsI TGGCCA 1 cut(s) 663
MluNI TGGCCA 1 cut(s) 663
MmeI TCCRAC 1 cut(s) 1199
Mox20I TGGCCA 1 cut(s) 663
Mph1103I ATGCAT 3 cut(s) 2970, 4087, 4195
MreI CGCCGGCG 1 cut(s) 46
MroI TCCGGA 2 cut(s) 856, 3214
MroNI GCCGGC 1 cut(s) 46
MroXI GAANNNNTTC 1 cut(s) 1710
MscI TGGCCA 1 cut(s) 663
MslI CAYNNNNRTG 8 cut(s) 800, 1843, 1914, 2973, 3362, 3542, 4023, 4782
Msp20I TGGCCA 1 cut(s) 663
MspA1I CMGCKG 5 cut(s) 276, 421, 934, 2016, 4513
MspCI CTTAAG 1 cut(s) 3290
MspI CCGG 8 cut(s) 47, 102, 744, 857, 987, 2541, 3215, 4231
MunI CAATTG 1 cut(s) 2669
Mva1269I GAATGC 4 cut(s) 251, 1422, 2989, 4793
MvnI CGCG 9 cut(s) 31, 236, 276, 389, 413, 437, 451, 491, 4099
NaeI GCCGGC 1 cut(s) 48
NciI CCSGG 2 cut(s) 102, 2542
NcoI CCATGG 2 cut(s) 795, 1822
NdeI CATATG 3 cut(s) 1275, 1299, 3298
NgoMIV GCCGGC 1 cut(s) 46
NmeAIII GCCGAG 4 cut(s) 157, 323, 673, 3010
NmuCI GTSAC 5 cut(s) 781, 956, 2512, 3014, 3384
NsiI ATGCAT 3 cut(s) 2970, 4087, 4195
NspI RCATGY 5 cut(s) 2968, 3635, 3701, 4022, 4589
OliI CACNNNNGTG 2 cut(s) 1843, 3542
PaeR7I CTCGAG 2 cut(s) 3101, 3473
PagI TCATGA 2 cut(s) 2971, 4777
PaqCI CACCTGC 1 cut(s) 2253
PciI ACATGT 3 cut(s) 3631, 4018, 4585
PciSI GCTCTTC 1 cut(s) 2394
PcsI WCGNNNNNNNCGW 4 cut(s) 75, 204, 476, 2644
PctI GAATGC 4 cut(s) 251, 1422, 2989, 4793
PdiI GCCGGC 1 cut(s) 48
PdmI GAANNNNTTC 1 cut(s) 1710
Pfl23II CGTACG 1 cut(s) 3748
PflFI GACNNNGTC 1 cut(s) 83
PflMI CCANNNNNTGG 1 cut(s) 1828
PfoI TCCNGGA 3 cut(s) 2126, 2168, 4170
PinAI ACCGGT 1 cut(s) 4230
Ple19I CGATCG 2 cut(s) 198, 483
Ppu21I YACGTR 1 cut(s) 4620
PpuMI RGGWCCY 2 cut(s) 790, 1038
PscI ACATGT 3 cut(s) 3631, 4018, 4585
PshAI GACNNNNGTC 1 cut(s) 1632
PshBI ATTAAT 1 cut(s) 3423
Psp124BI GAGCTC 1 cut(s) 681
Psp5II RGGWCCY 2 cut(s) 790, 1038
PspEI GGTNACC 2 cut(s) 781, 3014
PspFI CCCAGC 5 cut(s) 96, 2066, 3596, 4532, 4791
PspLI CGTACG 1 cut(s) 3748
PspPPI RGGWCCY 2 cut(s) 790, 1038
PspXI VCTCGAGB 1 cut(s) 3101
PstI CTGCAG 3 cut(s) 2250, 3240, 3832
PstNI CAGNNNCTG 3 cut(s) 637, 1903, 2798
PsuI RGATCY 7 cut(s) 1261, 1900, 2311, 2761, 3329, 4033, 4702
PsyI GACNNNGTC 1 cut(s) 83
PvuI CGATCG 2 cut(s) 198, 483
PvuII CAGCTG 2 cut(s) 934, 4513
RseI CAYNNNNRTG 8 cut(s) 800, 1843, 1914, 2973, 3362, 3542, 4023, 4782
SacI GAGCTC 1 cut(s) 681
SacII CCGCGG 1 cut(s) 277
SalI GTCGAC 1 cut(s) 68
SapI GCTCTTC 1 cut(s) 2394
SfcI CTRYAG 4 cut(s) 1799, 2246, 3236, 3828
Sfr274I CTCGAG 2 cut(s) 3101, 3473
Sfr303I CCGCGG 1 cut(s) 277
SgrAI CRCCGGYG 1 cut(s) 46
SgrBI CCGCGG 1 cut(s) 277
SinI GGWCC 8 cut(s) 741, 790, 984, 1038, 1553, 1634, 3307, 3410
SlaI CTCGAG 2 cut(s) 3101, 3473
SmiMI CAYNNNNRTG 8 cut(s) 800, 1843, 1914, 2973, 3362, 3542, 4023, 4782
SmlI CTYRAG 6 cut(s) 2405, 3101, 3290, 3473, 4075, 4397
SmoI CTYRAG 6 cut(s) 2405, 3101, 3290, 3473, 4075, 4397
SspI AATATT 2 cut(s) 3589, 4065
SspMI CTAG 9 cut(s) 819, 1557, 2061, 2148, 2802, 3023, 3084, 3344, 4906
SstI GAGCTC 1 cut(s) 681
StyI CCWWGG 4 cut(s) 795, 1155, 1822, 2565
TaiI ACGT 6 cut(s) 669, 725, 1605, 1693, 3091, 4622
TaqII GACCGA 1 cut(s) 2700
TatI WGTACW 5 cut(s) 1565, 1610, 2054, 3626, 4015
TscAI CASTG 7 cut(s) 376, 1197, 1398, 2788, 3406, 4438, 4656
TseFI GTSAC 5 cut(s) 781, 956, 2512, 3014, 3384
Tsp45I GTSAC 5 cut(s) 781, 956, 2512, 3014, 3384
TspGWI ACGGA 5 cut(s) 2653, 3517, 3567, 4106, 4430
TspRI CASTG 7 cut(s) 376, 1197, 1398, 2788, 3406, 4438, 4656
Tth111I GACNNNGTC 1 cut(s) 83
Van91I CCANNNNNTGG 1 cut(s) 1828
Vha464I CTTAAG 1 cut(s) 3290
VneI GTGCAC 2 cut(s) 3429, 4325
VpaK11BI GGWCC 8 cut(s) 741, 790, 984, 1038, 1553, 1634, 3307, 3410
VspI ATTAAT 1 cut(s) 3423
XagI CCTNNNNNAGG 2 cut(s) 3462, 3740
XapI RAATTY 8 cut(s) 331, 733, 1253, 1710, 1889, 2211, 2354, 3468
XbaI TCTAGA 3 cut(s) 3022, 3083, 3343
XceI RCATGY 5 cut(s) 2968, 3635, 3701, 4022, 4589
XcmI CCANNNNNNNNNTGG 1 cut(s) 1162
XhoI CTCGAG 2 cut(s) 3101, 3473
XmiI GTMKAC 2 cut(s) 69, 4403
XmnI GAANNNNTTC 1 cut(s) 1710
XspI CTAG 9 cut(s) 819, 1557, 2061, 2148, 2802, 3023, 3084, 3344, 4906
Zsp2I ATGCAT 3 cut(s) 2970, 4087, 4195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.