MD06G1185800.v1.1

Protein of unknown function (DUF627)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
32356486 .. 32370473
13988 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1185800.v1.1.491

Sequence Viewer

Length: 4908 bp
ATGGGGAATAAGAAGCGAAACGCTGCTCCGCGGCCCAAGCAGTCGCCGGCGGCGGTTCAGCCACTCCCGGCGGCCGATGGAGATGCTGTCATTCCATCCCAATCTGATACTACTCTAGCGGCCGCCGAGACCGATGCTCTACTCCTCTCGAATAACAAGATCGAATCCTCGCCGTTGCCGATGATCGAATCGGACGGCTCGGCGGCGAAGGTGGAATGCGAGCGGGCCCTGACGGCTCTTCGGCGGGGGAACCACACCAAGGCGCTGCGGCTGATGAAGGAGTCGTGCCAGCGGTACGAGAACTCGGGTCACTCGGCGCTGATTCACCGAGTCCAGGGAACTGTGTGCGTCAAGGTCGCCTCGATTATCGACGACCCCAACTCGAAGCAGCGGCATTTGCGGAACGCGATCGACTCCGCGCGCCGAGCCGTCGAGCTGTCTCCGAGCTCGATCGAGTTCGCGCACTTCTACGCCAATTTGCTCTACGAGGCGGCCAACGACGGGAAGGAGTACGAGGAAGTGGTGGCGGAGTGCGAGCGGGCGCTGGCGATCGAGAAGCCTGTTGATCCCGCCAGGGAGAGCTTGCAGGAGGAGAGCCAGCAGAAGATATTGACCGCCGATGCTCGAATTGGGCACGTGCAGAATGAGCTAAGGCAGCTGATTCAGAAGTCCAATATCGCTTCCATTTCGACTTGGATGAAGAATTTGGGCAATGGGGAGGAGAAGTTTCGGTTGATTCCGATTCGGAGGGCCACCGAGGACCCAATGGAGGTGAGGCTGGTGCAGACCAGGCGGCCTAATGAAATTAAGAAGGCGACTAAGACGCCGGAGGAGAGAAGGAAAGAGATTGAAGTGAGAGTGGCAGCGGCGAGGCTCTTGCAGCAGAAGTCTGAGGTGCCCCAATTGGGCAATGAGGGTGAGAAGAGTGACAGGGGATTGGATTCATCGTCGGGGTTCAGTCAGAGAGGTAGTGAGAGGAGAAAGTTTGGGAACTTGAGGAAAAACGGGTCCTCTGCAGAGAGGAAGGATCTGGTTCGGTCATACTGGAAATCAATGAGTGTTGATATGAAGAAAGAGTTACTTAAGGTTAGAGTTAGTGATCTTAAGGCGAAGTTTAGTTCATCTAAGGATGGTTTGGCAAATGAGGTTTTATCAGAGGCATTGGCATTTGCAGAGGGTAAGAGGAGCTGGAAGTTCTGGGTTTGTTGTAGATGTAATGAGAAGTTTGTGGATGGTGAGTCCCATATGCACCATGTTGTGCAAGAGCATATGGGAAACCTTATGCCCAAAATGCAGTCGGTTTTGCCTCAAAATGTTGATAATGAATGGACTGAGATGCTGCTTAATAGTTCTTGGAGACCGTTGGATGCGTCTTCTGCAGTTGGGATGCTTAGGGATCAAAGAAAATGCAAGGAGCATGAGTTTGTTGAGGATTTCTACTCTGGGAATCAGAACAAGGATTGTGATGAGTGTTTCAAAGATGCATGGGATTCTTCACCTGAGAAGGAAATGCTTGGGGATAGTCCTAGTGACTGTATTGTTGAGGGAAATAACCATGAGAAACTTGCCCGTGTTGTGTGCGAGGAGGAAAATGGGTTAATTGCATATTCTTCTGTTGCAAATGGTTGGCCAGTATCTGATGATTCTGAGCGCGAAAAGCTTCTTGAAAGAATTCATGCCTTATTTGAGGTGCTTATCAGGCACAAATATCTTGCTGCAAGCCATCTTAACAGGGTGATACAATTTACAATGGATGAGCTACAGGCGTCCTGTTCTCAGCTTCTCAACCACGGTGTGGAGCAAACACCTATGTGCATTTTCTTTCTAGGAGCTACCCAGCTTAGGAAAATCCTCAAGTTCTTGCAGGACCTGTCCCATGCTTGTGGTTTAGGTAGATATTCTGACAAAGGTAGCATTCCTGCAGATGATGCGAATAGCACAAATAAGGGTGTAGAGATTAAAGAGAGGATTGTTCTCAATGGAGATGCATCCTGCCTCATTTTGGATGAGAGTCTATTGTCATCTGAATGTACATGTGATGTTGGTCATCTTACTGTCAGTGACGCTGCTCCTGCTGCTGTCGTTGGTAATGGAAATGGGGTTCCTCCTGATTCCGATGCTCTGCTGTCCTGGATATTTGCTGGTCCAACTAGTGGGGAACAATTGACTTCATGGGTACACGCAAAAGAAGAGAAAACACAACAAGGGATGGAAATCCTTCAGATGCTTGAAAAGGAGTTTTACGACCTGCAGTCTCTTTGTGAGAGAAAGTGTGAGCATTTAAGCTATGAAGAAGCATTACAGGCAGTGGAGGATCTTTGTATTGAAGAAGGTAAGAAGAGGGAAAATGTCACAGAGTTTGGCCACCGAAGCTTTGAGTCCGTTCTACGGAAGAGAAGAGAAGAGCTTCTTGAGAGAGAGAATGATGTGATGTTCCTCAGCAATAGGATTGAATTAGATGCCATATCAAATGTGTTAAAGGAATATGAAGCTCTAAACATTAACCAGTTTGGATATGAGGAAACGTATGGTCGTGTGACTTCTCAGTTATTTGATTTGGAATATGGGGATGATGATTGGAGGGCCAAGGATTATGCTCATCAGGTGGACGCATGTGTAGAAGTTGCAATTCGGAGACAGAAAGAACAATTATATGTAGAGCTTAGCAAAATAGATGTACGGATTATGCGAAATGTTACTGGAATGCAGCAATTGGAAGTTAAGCTTGAACCTGTTTCTGCCCATGATTATCGGTCGATACTGTTGCCCCTAGTGAAGTCATACCTGCGGGCACATTTGGAGGATCTGGCTGAGCAAGATGCCACAGAAAAGTCCGATGCTGCAAGGGAAGCATTTTTGGCAGAACTTGCACTTGATTCTAAGAAAGGTGTCAGGGGGGAAAACGATAATTTGAGACATACACAGGAAAAAACAAAGGATAAGAAGAAGAACAAGGAGTTTAGAAAAGCAAAAGATTCAAAGGGTAATGGGGTTTCGGATGAGTACTTTCATCATGATGAGACCTCTGAGCTTACCTTTCCAGAGGCATCTGATGGTGAACTTCCAGATCCTGAGCTGGTGATTTCTGTGAATGGCAATGACTTGAAACAGCAGGAAGAGGAATGCAAACGGAGAATTGAACTTGAAGAAGAGGAAAGAAAGCTTGAAGAAACTTTAGAGTATCAAAGACAAATTGAGAAGGAAGCTAAGCAGAAGCACCTTGCTGAGCAAAACAAGAAATCTACTCAATTGCATCCAGAGAAGGTGGTGGAGGGATTGGATGATGTTAACTTGGAGTCTTGTGCTAATGGTCAAGATGTTAATGAGCCATTCAAGCCTTCTGTCCAGTTGACACAGAAGACTGGATTCCCCAACAATTTAGAAGGTCTTCCCGTTAACATGGCAAATGGTTCTGCAGTGCCAGCCAATTCTTCTACCGCTTCTGGTGCTCATCAAGCTAAAGTTAACCAAGGACTGGCAAATGGAGGAATTGTAGAAGAGGATGGTTGTTTGCCTTCTGATCGACGGACAGGAAGGAAAAACCGAAGACAGAGGAGTTCCACAAAAGTGCCTGATGGAAAGTCTCAAGGCTTGTCAACTGGAAACGAAAATGTTGAAGTTGGGAGGTCAAGTGTTGAGGGTTCACATGACAATCTCCTTATGAACAACCACAATGGAATACAGGAATTGAGACAGAAACGAGCAGAGGAAGACGATGAAGAAAGGTTCCAAGCTGACCTCAAAAAGGCCGTACGCCAAAGCCTTGACACATTCCAAGAACGTCAGAAGTTTCCTGTAGTTTCAAATTTGAGGATGCCCAGAAAAATATCTGCAGATGTAGATAACGGTGTTTTACATAATGACATCACAAATGAAAATGCGAGTGAAACCGATATATTTGGCACAGGGTTAAAGAATGAAGTTGGTGAATACAACTGCTTTCTGAATGTTATTATACAGTCTTTATGGCATGTTAGACTGTTTCGAGATGAGTACCTACGGAGATCAACATCAGAGCATGGTCATGTGGGGGATCCTTGTGTTGTCTGTGCGTTGTATGAAATCTTTACTGCTTTGAGCAATGCGTCTGCAGATACTCGAAGAGAAGCAGTTGCCCCTACTTCTTTGAGAATAGCTTTAAGCAACCTGTATCCAGAAAGTAATTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAAGTTTTGGTGGTGATATTTGATTGTCTTCACCGGTCGTTTACTCCTGGTTCTAGCCTTTCCAATGCTGAGTCAGTGGAAAGTAGTTGTCCGGGGTCTTGGGATTGTTCAAACAATGCTTGTATGGTGCATTCCATCTTTGGCATGGACATTTTCGAACGAATGAATTGCTACTATTGTGGTTTGGAGTCCAGACATCTCAAGTATACTTCCTTCTTCCATAACATAAATGCCAGTGCTCTCCGAACAATGAAGGTTATGTGTACAGAAAGCTCCTATGATGAGCTTTTAAATCATGTGGAGATGAATCATCAGTTAGCCTGTGATCCTGAAGCTGGTGGCTGTGGGAAGCTCAACCATATCCATCACATTCTCACAACCCCACCACATGTTTTTACAACAGTTCTGGGCTGGCAGAAGACATGCGAGAGTGCTGATGACATAAAAGCAACATTGGCAGCTCTTAATACTGAGATAGATATCAGTGTCCTTTATCGTGGCCTGGATCCAAAGACCACGCACAACTTGGTTTCTGTGGTTTGCTACTATGGACAACATTACCATTGCTTTGCCTATAGTCATGACCGTGGATGCTGGATTATGTACGATGATAAAACTGTCAAGGTGATTGGTGGCTGGGCTGATGTTCTTACCATGTGTGAAAGAGGGCATTTGCAACCACAGGTTCTTTTCTTTGAAGCTGTAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1636

Amino Acids

183.91

Weight (kDa)

5.43

Isoelectric Point (pI)

51.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF627 PF04781 76 - 185 1.1e-30 Protein of unknown function (DUF627)
DUF629 PF04780 345 - 875 2.9e-160 Protein of unknown function (DUF629)
UCH PF00443 1303 - 1630 2.3e-29 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2256, 2793
AccB1I GGYRCC 1 cut(s) 895
AccB7I CCANNNNNTGG 3 cut(s) 1795, 2153, 3475
AccBSI CCGCTC 2 cut(s) 223, 538
AccI GTMKAC 1 cut(s) 4403
AccII CGCG 6 cut(s) 31, 407, 419, 421, 461, 1653
AcoI YGGCCR 5 cut(s) 72, 120, 492, 1628, 2362
AcsI RAATTY 3 cut(s) 703, 1671, 3805
AcuI CTGAAG 3 cut(s) 2204, 4218, 4548
AcvI CACGTG 1 cut(s) 637
AcyI GRCGYC 2 cut(s) 824, 1766
AdeI CACNNNGTG 1 cut(s) 1795
AflII CTTAAG 2 cut(s) 1082, 1103
AflIII ACRYGT 2 cut(s) 2033, 4585
AgeI ACCGGT 1 cut(s) 4230
AhdI GACNNNNNGTC 1 cut(s) 2251
AhlI ACTAGT 1 cut(s) 2150
AjnI CCWGG 7 cut(s) 333, 572, 788, 2129, 4170, 4243, 4698
AleI CACNNNNGTG 2 cut(s) 1810, 3566
AloI GAACNNNNNNTCC 2 cut(s) 2085, 2117
Alw21I GWGCWC 3 cut(s) 449, 3451, 4438
Alw26I GTCTC 9 cut(s) 122, 444, 1351, 2259, 2629, 2908, 3014, 3588, 3685
AlwNI CAGNNNCTG 3 cut(s) 1637, 1870, 3071
Ama87I CYCGRG 1 cut(s) 304
ApaI GGGCCC 1 cut(s) 229
ApoI RAATTY 3 cut(s) 703, 1671, 3805
AsiGI ACCGGT 1 cut(s) 4230
Asp700I GAANNNNTTC 5 cut(s) 1659, 1671, 2217, 2406, 3387
AspLEI GCGC 7 cut(s) 265, 319, 421, 423, 463, 544, 1653
AspS9I GGNCC 9 cut(s) 33, 225, 226, 750, 760, 1008, 1867, 2144, 2583
AsuC2I CCSGG 2 cut(s) 68, 4290
AsuII TTCGAA 1 cut(s) 4353
AvaI CYCGRG 1 cut(s) 304
AvaII GGWCC 4 cut(s) 760, 1008, 1867, 2144
BaeGI GKGCMC 4 cut(s) 229, 636, 900, 2794
BalI TGGCCA 2 cut(s) 1630, 2364
BamHI GGATCC 2 cut(s) 4033, 4702
BanI GGYRCC 1 cut(s) 895
BanII GRGCYC 2 cut(s) 229, 449
BarI GAAGNNNNNNTAC 4 cut(s) 2283, 2315, 4394, 4426
BbrPI CACGTG 1 cut(s) 637
BbsI GAAGAC 7 cut(s) 1365, 3365, 3380, 3553, 3717, 4217, 4622
Bbv12I GWGCWC 3 cut(s) 449, 3451, 4438
BbvCI CCTCAGC 1 cut(s) 2438
BceAI ACGGC 5 cut(s) 157, 211, 249, 413, 3734
BciT130I CCWGG 7 cut(s) 335, 574, 790, 2131, 4172, 4245, 4700
BciVI GTATCC 1 cut(s) 4161
BcnI CCSGG 2 cut(s) 68, 4290
BcoDI GTCTC 9 cut(s) 122, 444, 1351, 2259, 2629, 2908, 3014, 3588, 3685
BcuI ACTAGT 1 cut(s) 2150
BfaI CTAG 7 cut(s) 116, 1527, 1826, 2151, 2771, 4251, 4906
BfoI RGCGCY 3 cut(s) 266, 320, 545
BfrI CTTAAG 2 cut(s) 1082, 1103
BfuAI ACCTGC 2 cut(s) 2256, 2793
BfuI GTATCC 1 cut(s) 4161
BglI GCCNNNNNGGC 1 cut(s) 233
BlpI GCTNAGC 4 cut(s) 2663, 2811, 3207, 3225
BmcAI AGTACT 1 cut(s) 3005
Bme1390I CCNGG 9 cut(s) 68, 335, 574, 790, 2131, 4172, 4245, 4290, 4700
Bme18I GGWCC 4 cut(s) 760, 1008, 1867, 2144
BmeRI GACNNNNNGTC 1 cut(s) 2251
BmeT110I CYCGRG 1 cut(s) 304
BmgT120I GGNCC 9 cut(s) 33, 225, 226, 750, 760, 1008, 1867, 2144, 2583
BmiI GGNNCC 9 cut(s) 227, 251, 762, 897, 1009, 2103, 3728, 4035, 4704
BmrFI CCNGG 9 cut(s) 68, 335, 574, 790, 2131, 4172, 4245, 4290, 4700
BpiI GAAGAC 7 cut(s) 1365, 3365, 3380, 3553, 3717, 4217, 4622
Bpu10I CCTNAGC 5 cut(s) 650, 1391, 1841, 2438, 3072
Bpu1102I GCTNAGC 4 cut(s) 2663, 2811, 3207, 3225
Bpu14I TTCGAA 1 cut(s) 4353
BpuEI CTTGAG 5 cut(s) 1015, 1838, 2432, 3570, 4382
BpuMI CCSGG 2 cut(s) 68, 4290
BsaAI YACGTR 1 cut(s) 637
BsaBI GATNNNNATC 3 cut(s) 2213, 4009, 4676
BsaHI GRCGYC 2 cut(s) 824, 1766
BsaI GGTCTC 3 cut(s) 122, 1351, 3014
BsaWI WCCGGW 1 cut(s) 4230
Bse118I RCCGGY 2 cut(s) 46, 4230
Bse1I ACTGG 9 cut(s) 1049, 1631, 2506, 2704, 3346, 3367, 3480, 3604, 4431
Bse3DI GCAATG 5 cut(s) 718, 916, 3103, 4087, 4759
Bse8I GATNNNNATC 3 cut(s) 2213, 4009, 4676
BseBI CCWGG 7 cut(s) 335, 574, 790, 2131, 4172, 4245, 4700
BseJI GATNNNNATC 3 cut(s) 2213, 4009, 4676
BseMI GCAATG 5 cut(s) 718, 916, 3103, 4087, 4759
BseNI ACTGG 9 cut(s) 1049, 1631, 2506, 2704, 3346, 3367, 3480, 3604, 4431
BsePI GCGCGC 1 cut(s) 419
BseRI GAGGAG 8 cut(s) 134, 605, 734, 845, 991, 1198, 1598, 3568
BseSI GKGCMC 4 cut(s) 229, 636, 900, 2794
BseX3I CGGCCG 2 cut(s) 72, 120
BseYI CCCAGC 2 cut(s) 1836, 4833
BsgI GTGCAG 2 cut(s) 659, 803
Bsh1236I CGCG 6 cut(s) 31, 407, 419, 421, 461, 1653
Bsh1285I CGRYCG 7 cut(s) 75, 123, 411, 453, 552, 2756, 4235
BshNI GGYRCC 1 cut(s) 895
BshTI ACCGGT 1 cut(s) 4230
BsiEI CGRYCG 7 cut(s) 75, 123, 411, 453, 552, 2756, 4235
BsiHKAI GWGCWC 3 cut(s) 449, 3451, 4438
BsiHKCI CYCGRG 1 cut(s) 304
BsiSI CCGG 5 cut(s) 47, 68, 827, 4231, 4289
BsiWI CGTACG 1 cut(s) 3751
BslFI GGGAC 2 cut(s) 1225, 1858
BsmAI GTCTC 9 cut(s) 122, 444, 1351, 2259, 2629, 2908, 3014, 3588, 3685
BsmFI GGGAC 2 cut(s) 1225, 1858
BsmI GAATGC 5 cut(s) 221, 1914, 2709, 3128, 4327
Bso31I GGTCTC 3 cut(s) 122, 1351, 3014
BsoBI CYCGRG 1 cut(s) 304
Bsp119I TTCGAA 1 cut(s) 4353
Bsp120I GGGCCC 1 cut(s) 225
Bsp1286I GDGCHC 7 cut(s) 229, 449, 636, 900, 2794, 3451, 4438
Bsp1407I TGTACA 2 cut(s) 2030, 4460
Bsp1720I GCTNAGC 4 cut(s) 2663, 2811, 3207, 3225
BspFNI CGCG 6 cut(s) 31, 407, 419, 421, 461, 1653
BspHI TCATGA 2 cut(s) 3013, 4777
BspLI GGNNCC 9 cut(s) 227, 251, 762, 897, 1009, 2103, 3728, 4035, 4704
BspMAI CTGCAG 7 cut(s) 1018, 1381, 1924, 2253, 3418, 3835, 4093
BspMI ACCTGC 2 cut(s) 2256, 2793
BspQI GCTCTTC 2 cut(s) 243, 2397
BspT104I TTCGAA 1 cut(s) 4353
BspT107I GGYRCC 1 cut(s) 895
BspTI CTTAAG 2 cut(s) 1082, 1103
BspTNI GGTCTC 3 cut(s) 122, 1351, 3014
BsrBI CCGCTC 2 cut(s) 223, 538
BsrDI GCAATG 5 cut(s) 718, 916, 3103, 4087, 4759
BsrFI RCCGGY 2 cut(s) 46, 4230
BsrGI TGTACA 2 cut(s) 2030, 4460
BsrI ACTGG 9 cut(s) 1049, 1631, 2506, 2704, 3346, 3367, 3480, 3604, 4431
BssAI RCCGGY 2 cut(s) 46, 4230
BssHII GCGCGC 1 cut(s) 419
BssNAI GTATAC 1 cut(s) 4404
BssNI GRCGYC 2 cut(s) 824, 1766
BssT1I CCWWGG 3 cut(s) 258, 2586, 3469
Bst1107I GTATAC 1 cut(s) 4404
Bst2UI CCWGG 7 cut(s) 335, 574, 790, 2131, 4172, 4245, 4700
BstACI GRCGYC 2 cut(s) 824, 1766
BstAFI CTTAAG 2 cut(s) 1082, 1103
BstAPI GCANNNNNTGC 2 cut(s) 1928, 2867
BstAUI TGTACA 2 cut(s) 2030, 4460
BstBAI YACGTR 1 cut(s) 637
BstBI TTCGAA 1 cut(s) 4353
BstDSI CCRYGG 3 cut(s) 29, 1789, 4783
BstENI CCTNNNNNAGG 1 cut(s) 3743
BstFNI CGCG 6 cut(s) 31, 407, 419, 421, 461, 1653
BstH2I RGCGCY 3 cut(s) 266, 320, 545
BstHHI GCGC 7 cut(s) 265, 319, 421, 423, 463, 544, 1653
BstMAI GTCTC 9 cut(s) 122, 444, 1351, 2259, 2629, 2908, 3014, 3588, 3685
BstMCI CGRYCG 7 cut(s) 75, 123, 411, 453, 552, 2756, 4235
BstNI CCWGG 7 cut(s) 335, 574, 790, 2131, 4172, 4245, 4700
BstNSI RCATGY 5 cut(s) 2037, 2616, 3974, 4589, 4623
BstSCI CCNGG 9 cut(s) 66, 333, 572, 788, 2129, 4170, 4243, 4288, 4698
BstSLI GKGCMC 4 cut(s) 229, 636, 900, 2794
BstUI CGCG 6 cut(s) 31, 407, 419, 421, 461, 1653
BstV2I GAAGAC 7 cut(s) 1365, 3365, 3380, 3553, 3717, 4217, 4622
BstX2I RGATCY 6 cut(s) 1027, 2314, 2803, 3067, 4033, 4702
BstXI CCANNNNNNTGG 1 cut(s) 1883
BstYI RGATCY 6 cut(s) 1027, 2314, 2803, 3067, 4033, 4702
BstZ17I GTATAC 1 cut(s) 4404
BstZI CGGCCG 2 cut(s) 72, 120
BsuI GTATCC 1 cut(s) 4161
BtgI CCRYGG 3 cut(s) 29, 1789, 4783
BtsI GCAGTG 2 cut(s) 2313, 3423
BtsIMutI CAGTG 6 cut(s) 2065, 2313, 3423, 4278, 4438, 4687
BveI ACCTGC 2 cut(s) 2256, 2793
CaiI CAGNNNCTG 3 cut(s) 1637, 1870, 3071
CciI TCATGA 2 cut(s) 3013, 4777
CciNI GCGGCCGC 1 cut(s) 120
CfoI GCGC 7 cut(s) 265, 319, 421, 423, 463, 544, 1653
Cfr10I RCCGGY 2 cut(s) 46, 4230
Cfr13I GGNCC 9 cut(s) 33, 225, 226, 750, 760, 1008, 1867, 2144, 2583
Cfr42I CCGCGG 1 cut(s) 32
CseI GACGC 7 cut(s) 337, 832, 1359, 1755, 2072, 2618, 4074
CspAI ACCGGT 1 cut(s) 4230
DraI TTTAAA 1 cut(s) 4488
DraIII CACNNNGTG 1 cut(s) 1795
DriI GACNNNNNGTC 1 cut(s) 2251
EaeI YGGCCR 5 cut(s) 72, 120, 492, 1628, 2362
EagI CGGCCG 2 cut(s) 72, 120
Eam1105I GACNNNNNGTC 1 cut(s) 2251
EciI GGCGGA 1 cut(s) 542
Ecl136II GAGCTC 1 cut(s) 447
EclXI CGGCCG 2 cut(s) 72, 120
Eco130I CCWWGG 3 cut(s) 258, 2586, 3469
Eco24I GRGCYC 2 cut(s) 229, 449
Eco31I GGTCTC 3 cut(s) 122, 1351, 3014
Eco32I GATATC 1 cut(s) 4678
Eco47I GGWCC 4 cut(s) 760, 1008, 1867, 2144
Eco52I CGGCCG 2 cut(s) 72, 120
Eco53kI GAGCTC 1 cut(s) 447
Eco57I CTGAAG 3 cut(s) 2204, 4218, 4548
Eco72I CACGTG 1 cut(s) 637
Eco88I CYCGRG 1 cut(s) 304
EcoICRI GAGCTC 1 cut(s) 447
EcoNI CCTNNNNNAGG 1 cut(s) 3743
EcoO109I RGGNCCY 4 cut(s) 226, 760, 1008, 1867
EcoRI GAATTC 1 cut(s) 1671
EcoRII CCWGG 7 cut(s) 333, 572, 788, 2129, 4170, 4243, 4698
EcoRV GATATC 1 cut(s) 4678
EcoT14I CCWWGG 3 cut(s) 258, 2586, 3469
EcoT22I ATGCAT 2 cut(s) 1486, 1990
EcoT38I GRGCYC 2 cut(s) 229, 449
ErhI CCWWGG 3 cut(s) 258, 2586, 3469
FalI AAGNNNNNCTT 6 cut(s) 1065, 1097, 2394, 2426, 2709, 2741
FaqI GGGAC 2 cut(s) 1225, 1858
FauI CCCGC 5 cut(s) 216, 237, 531, 577, 2781
FauNDI CATATG 2 cut(s) 1245, 1269
FblI GTMKAC 1 cut(s) 4403
FriOI GRGCYC 2 cut(s) 229, 449
FspBI CTAG 7 cut(s) 116, 1527, 1826, 2151, 2771, 4251, 4906
GlaI GCGC 7 cut(s) 264, 318, 420, 422, 462, 543, 1652
GsaI CCCAGC 2 cut(s) 1840, 4837
HaeII RGCGCY 3 cut(s) 266, 320, 545
HapII CCGG 5 cut(s) 47, 68, 827, 4231, 4289
HgaI GACGC 7 cut(s) 337, 832, 1359, 1755, 2072, 2618, 4074
HhaI GCGC 7 cut(s) 265, 319, 421, 423, 463, 544, 1653
Hin1I GRCGYC 2 cut(s) 824, 1766
Hin6I GCGC 7 cut(s) 263, 317, 419, 421, 461, 542, 1651
HinP1I GCGC 7 cut(s) 263, 317, 419, 421, 461, 542, 1651
HincII GTYRAC 5 cut(s) 3289, 3351, 3397, 3466, 3597
HindII GTYRAC 5 cut(s) 3289, 3351, 3397, 3466, 3597
HindIII AAGCTT 4 cut(s) 1658, 2371, 2723, 3161
HpaI GTTAAC 3 cut(s) 3289, 3397, 3466
HpaII CCGG 5 cut(s) 47, 68, 827, 4231, 4289
Hpy99I CGWCG 5 cut(s) 374, 434, 503, 952, 3528
HpyCH4IV ACGT 3 cut(s) 636, 2525, 3781
HpySE526I ACGT 3 cut(s) 636, 2525, 3781
Hsp92I GRCGYC 2 cut(s) 824, 1766
HspAI GCGC 7 cut(s) 263, 317, 419, 421, 461, 542, 1651
KroI GCCGGC 1 cut(s) 46
KroNI GCCGGC 1 cut(s) 48
KspAI GTTAAC 3 cut(s) 3289, 3397, 3466
KspI CCGCGG 1 cut(s) 32
LguI GCTCTTC 2 cut(s) 243, 2397
LmnI GCTCC 7 cut(s) 31, 1185, 1414, 1798, 1829, 2074, 4475
MaeI CTAG 7 cut(s) 116, 1527, 1826, 2151, 2771, 4251, 4906
MaeII ACGT 3 cut(s) 636, 2525, 3781
MaeIII GTNAC 8 cut(s) 308, 926, 1077, 1529, 2060, 2350, 2536, 2695
MbiI CCGCTC 2 cut(s) 223, 538
MfeI CAATTG 4 cut(s) 902, 2162, 2711, 3248
MflI RGATCY 6 cut(s) 1027, 2314, 2803, 3067, 4033, 4702
MhlI GDGCHC 7 cut(s) 229, 449, 636, 900, 2794, 3451, 4438
MlsI TGGCCA 2 cut(s) 1630, 2364
MluNI TGGCCA 2 cut(s) 1630, 2364
MlyI GAGTC 9 cut(s) 290, 339, 407, 1247, 2020, 2387, 3305, 4277, 4394
MmeI TCCRAC 2 cut(s) 1344, 2171
Mox20I TGGCCA 2 cut(s) 1630, 2364
Mph1103I ATGCAT 2 cut(s) 1486, 1990
MreI CGCCGGCG 1 cut(s) 46
MroNI GCCGGC 1 cut(s) 46
MroXI GAANNNNTTC 5 cut(s) 1659, 1671, 2217, 2406, 3387
MscI TGGCCA 2 cut(s) 1630, 2364
MslI CAYNNNNRTG 7 cut(s) 1810, 1881, 2026, 3015, 3566, 4023, 4782
Msp20I TGGCCA 2 cut(s) 1630, 2364
MspA1I CMGCKG 5 cut(s) 31, 292, 391, 658, 866
MspCI CTTAAG 2 cut(s) 1082, 1103
MspI CCGG 5 cut(s) 47, 68, 827, 4231, 4289
MspR9I CCNGG 9 cut(s) 68, 335, 574, 790, 2131, 4172, 4245, 4290, 4700
MunI CAATTG 4 cut(s) 902, 2162, 2711, 3248
Mva1269I GAATGC 5 cut(s) 221, 1914, 2709, 3128, 4327
MvaI CCWGG 7 cut(s) 335, 574, 790, 2131, 4172, 4245, 4700
MvnI CGCG 6 cut(s) 31, 407, 419, 421, 461, 1653
NaeI GCCGGC 1 cut(s) 48
NciI CCSGG 2 cut(s) 68, 4290
NdeI CATATG 2 cut(s) 1245, 1269
NgoMIV GCCGGC 1 cut(s) 46
NlaIV GGNNCC 9 cut(s) 227, 251, 762, 897, 1009, 2103, 3728, 4035, 4704
NmeAIII GCCGAG 4 cut(s) 151, 179, 293, 449
NmuCI GTSAC 6 cut(s) 308, 926, 1529, 2060, 2350, 2536
NotI GCGGCCGC 1 cut(s) 120
NsiI ATGCAT 2 cut(s) 1486, 1990
NspI RCATGY 5 cut(s) 2037, 2616, 3974, 4589, 4623
NspV TTCGAA 1 cut(s) 4353
OliI CACNNNNGTG 2 cut(s) 1810, 3566
PagI TCATGA 2 cut(s) 3013, 4777
PauI GCGCGC 1 cut(s) 419
PciI ACATGT 2 cut(s) 2033, 4585
PciSI GCTCTTC 2 cut(s) 243, 2397
PcsI WCGNNNNNNNCGW 2 cut(s) 176, 2686
PctI GAATGC 5 cut(s) 221, 1914, 2709, 3128, 4327
PdiI GCCGGC 1 cut(s) 48
PdmI GAANNNNTTC 5 cut(s) 1659, 1671, 2217, 2406, 3387
Pfl23II CGTACG 1 cut(s) 3751
PflMI CCANNNNNTGG 3 cut(s) 1795, 2153, 3475
PfoI TCCNGGA 2 cut(s) 2129, 4170
PinAI ACCGGT 1 cut(s) 4230
Ple19I CGATCG 3 cut(s) 411, 453, 552
PleI GAGTC 9 cut(s) 289, 338, 407, 1246, 2019, 2386, 3304, 4276, 4393
PmaCI CACGTG 1 cut(s) 637
PmlI CACGTG 1 cut(s) 637
PpsI GAGTC 9 cut(s) 289, 338, 407, 1246, 2019, 2386, 3304, 4276, 4393
Ppu21I YACGTR 1 cut(s) 637
PpuMI RGGWCCY 3 cut(s) 760, 1008, 1867
PscI ACATGT 2 cut(s) 2033, 4585
Psp124BI GAGCTC 1 cut(s) 449
Psp5II RGGWCCY 3 cut(s) 760, 1008, 1867
Psp6I CCWGG 7 cut(s) 333, 572, 788, 2129, 4170, 4243, 4698
PspCI CACGTG 1 cut(s) 637
PspFI CCCAGC 2 cut(s) 1836, 4833
PspGI CCWGG 7 cut(s) 333, 572, 788, 2129, 4170, 4243, 4698
PspLI CGTACG 1 cut(s) 3751
PspN4I GGNNCC 9 cut(s) 227, 251, 762, 897, 1009, 2103, 3728, 4035, 4704
PspOMI GGGCCC 1 cut(s) 225
PspPI GGNCC 9 cut(s) 33, 225, 226, 750, 760, 1008, 1867, 2144, 2583
PspPPI RGGWCCY 3 cut(s) 760, 1008, 1867
PstI CTGCAG 7 cut(s) 1018, 1381, 1924, 2253, 3418, 3835, 4093
PstNI CAGNNNCTG 3 cut(s) 1637, 1870, 3071
PsuI RGATCY 6 cut(s) 1027, 2314, 2803, 3067, 4033, 4702
PteI GCGCGC 1 cut(s) 419
PvuI CGATCG 3 cut(s) 411, 453, 552
PvuII CAGCTG 1 cut(s) 658
RseI CAYNNNNRTG 7 cut(s) 1810, 1881, 2026, 3015, 3566, 4023, 4782
SacI GAGCTC 1 cut(s) 449
SacII CCGCGG 1 cut(s) 32
SapI GCTCTTC 2 cut(s) 243, 2397
Sau96I GGNCC 9 cut(s) 33, 225, 226, 750, 760, 1008, 1867, 2144, 2583
ScaI AGTACT 1 cut(s) 3005
SchI GAGTC 9 cut(s) 290, 339, 407, 1247, 2020, 2387, 3305, 4277, 4394
ScrFI CCNGG 9 cut(s) 68, 335, 574, 790, 2131, 4172, 4245, 4290, 4700
SduI GDGCHC 7 cut(s) 229, 449, 636, 900, 2794, 3451, 4438
Sfr303I CCGCGG 1 cut(s) 32
SfuI TTCGAA 1 cut(s) 4353
SgrAI CRCCGGYG 1 cut(s) 46
SgrBI CCGCGG 1 cut(s) 32
SinI GGWCC 4 cut(s) 760, 1008, 1867, 2144
SmiMI CAYNNNNRTG 7 cut(s) 1810, 1881, 2026, 3015, 3566, 4023, 4782
SmlI CTYRAG 7 cut(s) 994, 1082, 1103, 1853, 2411, 3585, 4397
SmoI CTYRAG 7 cut(s) 994, 1082, 1103, 1853, 2411, 3585, 4397
SpeI ACTAGT 1 cut(s) 2150
SspMI CTAG 7 cut(s) 116, 1527, 1826, 2151, 2771, 4251, 4906
SstI GAGCTC 1 cut(s) 449
StyD4I CCNGG 9 cut(s) 66, 333, 572, 788, 2129, 4170, 4243, 4288, 4698
StyI CCWWGG 3 cut(s) 258, 2586, 3469
TaiI ACGT 3 cut(s) 639, 2528, 3784
TaqII GACCGA 3 cut(s) 146, 1026, 2742
TatI WGTACW 3 cut(s) 2030, 3003, 4460
TscAI CASTG 6 cut(s) 2065, 2313, 3423, 4278, 4438, 4687
TseFI GTSAC 6 cut(s) 308, 926, 1529, 2060, 2350, 2536
Tsp45I GTSAC 6 cut(s) 308, 926, 1529, 2060, 2350, 2536
TspGWI ACGGA 6 cut(s) 2371, 2404, 2695, 3145, 3541, 4015
TspRI CASTG 6 cut(s) 2065, 2313, 3423, 4278, 4438, 4687
Van91I CCANNNNNTGG 3 cut(s) 1795, 2153, 3475
Vha464I CTTAAG 2 cut(s) 1082, 1103
VpaK11BI GGWCC 4 cut(s) 760, 1008, 1867, 2144
XagI CCTNNNNNAGG 1 cut(s) 3743
XapI RAATTY 3 cut(s) 703, 1671, 3805
XceI RCATGY 5 cut(s) 2037, 2616, 3974, 4589, 4623
XcmI CCANNNNNNNNNTGG 2 cut(s) 4339, 4720
XmiI GTMKAC 1 cut(s) 4403
XmnI GAANNNNTTC 5 cut(s) 1659, 1671, 2217, 2406, 3387
XspI CTAG 7 cut(s) 116, 1527, 1826, 2151, 2771, 4251, 4906
ZrmI AGTACT 1 cut(s) 3005
Zsp2I ATGCAT 2 cut(s) 1486, 1990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.