Protein of unknown function (DUF627)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47890 AT3G47890 AT3G47910 AT3G47910 |
| fragaria_vesca | FvH4_5g15740 FvH4_5g15740 |
| malus_domestica | MD06G1185800.v1.1 MD14G1192000.v1.1 |
| prunus_persica | Prupe.5G184600_v2.0.a1 Prupe.5G184600_v2.0.a1 |
| pyrus_communis | pycom06g16520 pycom14g15970 |
| rosa_chinensis | RchiOBHm_Chr7g0180371 |
| rosa_laevigata | RLG00000005273 |
| rosa_multiflora | Rmu_sc0003526.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00272950 |
| rosa_rugosa | Rorug06G0432500 |
| rosa_samantha | Rh7AG033100 Rh7BG033000 Rh7CG034900 Rh7DG033500 |
| rosa_wichuraiana | Rw7G002760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2268 |
| Acc36I | ACCTGC | 3 cut(s) | 2144, 2268, 2808 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1810, 2165 |
| AccBSI | CCGCTC | 3 cut(s) | 229, 242, 544 |
| AccI | GTMKAC | 1 cut(s) | 4418 |
| AccII | CGCG | 4 cut(s) | 31, 413, 427, 467 |
| AclI | AACGTT | 1 cut(s) | 3188 |
| AclWI | GGATC | 6 cut(s) | 566, 1410, 2334, 2826, 4712, 4725 |
| AcoI | YGGCCR | 5 cut(s) | 72, 498, 621, 1643, 3831 |
| AcsI | RAATTY | 5 cut(s) | 709, 1427, 1686, 3074, 3504 |
| AcuI | CTGAAG | 4 cut(s) | 2216, 2520, 4233, 4563 |
| AcvI | CACGTG | 1 cut(s) | 643 |
| AcyI | GRCGYC | 2 cut(s) | 84, 108 |
| AdeI | CACNNNGTG | 2 cut(s) | 351, 1810 |
| AflII | CTTAAG | 2 cut(s) | 1088, 1109 |
| AflIII | ACRYGT | 3 cut(s) | 2048, 2627, 4600 |
| AgeI | ACCGGT | 1 cut(s) | 4245 |
| AhlI | ACTAGT | 1 cut(s) | 2162 |
| AleI | CACNNNNGTG | 2 cut(s) | 1825, 3581 |
| Alw21I | GWGCWC | 2 cut(s) | 3466, 4453 |
| Alw26I | GTCTC | 8 cut(s) | 75, 102, 2271, 2644, 2923, 3029, 3603, 3700 |
| AlwI | GGATC | 6 cut(s) | 566, 1410, 2334, 2826, 4712, 4725 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1652, 1885, 3086 |
| Ama87I | CYCGRG | 2 cut(s) | 2423, 3600 |
| ApaI | GGGCCC | 1 cut(s) | 235 |
| ApoI | RAATTY | 5 cut(s) | 709, 1427, 1686, 3074, 3504 |
| AseI | ATTAAT | 1 cut(s) | 2514 |
| AsiGI | ACCGGT | 1 cut(s) | 4245 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1674, 1686, 2229, 2418 |
| AspLEI | GCGC | 5 cut(s) | 271, 427, 429, 469, 550 |
| AspS9I | GGNCC | 7 cut(s) | 231, 232, 766, 1014, 1882, 2156, 3290 |
| AsuC2I | CCSGG | 2 cut(s) | 68, 3848 |
| AsuHPI | GGTGA | 9 cut(s) | 323, 790, 935, 1762, 3106, 3953, 4235, 4514, 4849 |
| AsuII | TTCGAA | 1 cut(s) | 4368 |
| AvaI | CYCGRG | 2 cut(s) | 2423, 3600 |
| AvaII | GGWCC | 5 cut(s) | 766, 1014, 1882, 2156, 3290 |
| BaeGI | GKGCMC | 4 cut(s) | 235, 347, 642, 2809 |
| BalI | TGGCCA | 2 cut(s) | 1645, 3833 |
| BamHI | GGATCC | 1 cut(s) | 4717 |
| BanII | GRGCYC | 2 cut(s) | 138, 235 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2295, 2327, 4409, 4441 |
| BbrPI | CACGTG | 1 cut(s) | 643 |
| BbsI | GAAGAC | 3 cut(s) | 3568, 4232, 4637 |
| Bbv12I | GWGCWC | 2 cut(s) | 3466, 4453 |
| BbvCI | CCTCAGC | 2 cut(s) | 656, 1018 |
| BccI | CCATC | 9 cut(s) | 71, 1130, 1746, 2215, 3512, 3584, 3823, 4355, 4584 |
| BceAI | ACGGC | 6 cut(s) | 71, 163, 217, 419, 636, 3749 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 122, 156, 865, 899, 2761, 2795, 4362, 4396 |
| BciVI | GTATCC | 1 cut(s) | 4176 |
| BcnI | CCSGG | 2 cut(s) | 68, 3848 |
| BcoDI | GTCTC | 8 cut(s) | 75, 102, 2271, 2644, 2923, 3029, 3603, 3700 |
| BcuI | ACTAGT | 1 cut(s) | 2162 |
| BfaI | CTAG | 8 cut(s) | 963, 1533, 1841, 2163, 2786, 3509, 3779, 4921 |
| BfmI | CTRYAG | 7 cut(s) | 1383, 1775, 2261, 3429, 3810, 4104, 4786 |
| BfoI | RGCGCY | 2 cut(s) | 272, 551 |
| BfrI | CTTAAG | 2 cut(s) | 1088, 1109 |
| BfuAI | ACCTGC | 3 cut(s) | 2144, 2268, 2808 |
| BfuI | GTATCC | 1 cut(s) | 4176 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 116 |
| BlpI | GCTNAGC | 3 cut(s) | 2678, 3222, 3240 |
| BmcAI | AGTACT | 1 cut(s) | 3020 |
| Bme18I | GGWCC | 5 cut(s) | 766, 1014, 1882, 2156, 3290 |
| BmeT110I | CYCGRG | 2 cut(s) | 2423, 3600 |
| BmgT120I | GGNCC | 7 cut(s) | 231, 232, 766, 1014, 1882, 2156, 3290 |
| BpiI | GAAGAC | 3 cut(s) | 3568, 4232, 4637 |
| Bpu10I | CCTNAGC | 3 cut(s) | 656, 1018, 1856 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 2678, 3222, 3240 |
| Bpu14I | TTCGAA | 1 cut(s) | 4368 |
| BpuEI | CTTGAG | 3 cut(s) | 1021, 1853, 4397 |
| BpuMI | CCSGG | 2 cut(s) | 68, 3848 |
| Bsa29I | ATCGAT | 1 cut(s) | 192 |
| BsaAI | YACGTR | 1 cut(s) | 643 |
| BsaBI | GATNNNNATC | 4 cut(s) | 2225, 2589, 4024, 4691 |
| BsaHI | GRCGYC | 2 cut(s) | 84, 108 |
| BsaWI | WCCGGW | 2 cut(s) | 832, 4245 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 72, 102, 716, 746, 3631, 3661, 4039, 4069 |
| Bse118I | RCCGGY | 3 cut(s) | 46, 565, 4245 |
| Bse1I | ACTGG | 6 cut(s) | 1646, 2719, 3361, 3437, 4446, 4525 |
| Bse3DI | GCAATG | 5 cut(s) | 724, 1612, 2325, 4102, 4774 |
| Bse8I | GATNNNNATC | 4 cut(s) | 2225, 2589, 4024, 4691 |
| BseCI | ATCGAT | 1 cut(s) | 192 |
| BseJI | GATNNNNATC | 4 cut(s) | 2225, 2589, 4024, 4691 |
| BseMI | GCAATG | 5 cut(s) | 724, 1612, 2325, 4102, 4774 |
| BseNI | ACTGG | 6 cut(s) | 1646, 2719, 3361, 3437, 4446, 4525 |
| BsePI | GCGCGC | 1 cut(s) | 425 |
| BseRI | GAGGAG | 9 cut(s) | 140, 611, 740, 851, 997, 1613, 2422, 2925, 3583 |
| BseSI | GKGCMC | 4 cut(s) | 235, 347, 642, 2809 |
| BseX3I | CGGCCG | 1 cut(s) | 621 |
| BseYI | CCCAGC | 2 cut(s) | 1851, 4848 |
| BsgI | GTGCAG | 3 cut(s) | 665, 809, 4497 |
| Bsh1236I | CGCG | 4 cut(s) | 31, 413, 427, 467 |
| Bsh1285I | CGRYCG | 6 cut(s) | 417, 459, 558, 570, 624, 2771 |
| BshTI | ACCGGT | 1 cut(s) | 4245 |
| BshVI | ATCGAT | 1 cut(s) | 192 |
| BsiEI | CGRYCG | 6 cut(s) | 417, 459, 558, 570, 624, 2771 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3466, 4453 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2423, 3600 |
| BsiSI | CCGG | 6 cut(s) | 47, 68, 566, 833, 3848, 4246 |
| BsiWI | CGTACG | 1 cut(s) | 3766 |
| BslFI | GGGAC | 3 cut(s) | 1231, 1873, 3303 |
| BsmAI | GTCTC | 8 cut(s) | 75, 102, 2271, 2644, 2923, 3029, 3603, 3700 |
| BsmBI | CGTCTC | 3 cut(s) | 75, 102, 2644 |
| BsmFI | GGGAC | 3 cut(s) | 1231, 1873, 3303 |
| BsmI | GAATGC | 5 cut(s) | 227, 1398, 2724, 3143, 4342 |
| BsoBI | CYCGRG | 2 cut(s) | 2423, 3600 |
| Bsp119I | TTCGAA | 1 cut(s) | 4368 |
| Bsp120I | GGGCCC | 1 cut(s) | 231 |
| Bsp1286I | GDGCHC | 7 cut(s) | 138, 235, 347, 642, 2809, 3466, 4453 |
| Bsp1407I | TGTACA | 3 cut(s) | 2045, 2611, 2632 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 2678, 3222, 3240 |
| BspDI | ATCGAT | 1 cut(s) | 192 |
| BspFNI | CGCG | 4 cut(s) | 31, 413, 427, 467 |
| BspHI | TCATGA | 2 cut(s) | 3028, 4792 |
| BspMAI | CTGCAG | 4 cut(s) | 1387, 2265, 3433, 4108 |
| BspMI | ACCTGC | 3 cut(s) | 2144, 2268, 2808 |
| BspPI | GGATC | 6 cut(s) | 566, 1410, 2334, 2826, 4712, 4725 |
| BspQI | GCTCTTC | 1 cut(s) | 2409 |
| BspT104I | TTCGAA | 1 cut(s) | 4368 |
| BspTI | CTTAAG | 2 cut(s) | 1088, 1109 |
| BsrBI | CCGCTC | 3 cut(s) | 229, 242, 544 |
| BsrDI | GCAATG | 5 cut(s) | 724, 1612, 2325, 4102, 4774 |
| BsrFI | RCCGGY | 3 cut(s) | 46, 565, 4245 |
| BsrGI | TGTACA | 3 cut(s) | 2045, 2611, 2632 |
| BsrI | ACTGG | 6 cut(s) | 1646, 2719, 3361, 3437, 4446, 4525 |
| BssAI | RCCGGY | 3 cut(s) | 46, 565, 4245 |
| BssHII | GCGCGC | 1 cut(s) | 425 |
| BssNAI | GTATAC | 1 cut(s) | 4419 |
| BssNI | GRCGYC | 2 cut(s) | 84, 108 |
| BssT1I | CCWWGG | 2 cut(s) | 264, 3484 |
| Bst1107I | GTATAC | 1 cut(s) | 4419 |
| Bst6I | CTCTTC | 7 cut(s) | 923, 2196, 2345, 2399, 2409, 3126, 3159 |
| BstACI | GRCGYC | 2 cut(s) | 84, 108 |
| BstAFI | CTTAAG | 2 cut(s) | 1088, 1109 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 351, 1382, 2882 |
| BstAUI | TGTACA | 3 cut(s) | 2045, 2611, 2632 |
| BstBAI | YACGTR | 1 cut(s) | 643 |
| BstBI | TTCGAA | 1 cut(s) | 4368 |
| BstDSI | CCRYGG | 2 cut(s) | 1804, 4798 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3758 |
| BstFNI | CGCG | 4 cut(s) | 31, 413, 427, 467 |
| BstH2I | RGCGCY | 2 cut(s) | 272, 551 |
| BstHHI | GCGC | 5 cut(s) | 271, 427, 429, 469, 550 |
| BstMAI | GTCTC | 8 cut(s) | 75, 102, 2271, 2644, 2923, 3029, 3603, 3700 |
| BstMCI | CGRYCG | 6 cut(s) | 417, 459, 558, 570, 624, 2771 |
| BstNSI | RCATGY | 6 cut(s) | 1277, 2052, 2631, 4037, 4604, 4638 |
| BstSFI | CTRYAG | 7 cut(s) | 1383, 1775, 2261, 3429, 3810, 4104, 4786 |
| BstSLI | GKGCMC | 4 cut(s) | 235, 347, 642, 2809 |
| BstUI | CGCG | 4 cut(s) | 31, 413, 427, 467 |
| BstV2I | GAAGAC | 3 cut(s) | 3568, 4232, 4637 |
| BstX2I | RGATCY | 3 cut(s) | 2326, 2818, 4717 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1898, 4311 |
| BstYI | RGATCY | 3 cut(s) | 2326, 2818, 4717 |
| BstZ17I | GTATAC | 1 cut(s) | 4419 |
| BstZI | CGGCCG | 1 cut(s) | 621 |
| Bsu15I | ATCGAT | 1 cut(s) | 192 |
| BsuI | GTATCC | 1 cut(s) | 4176 |
| BsuTUI | ATCGAT | 1 cut(s) | 192 |
| BtgI | CCRYGG | 2 cut(s) | 1804, 4798 |
| BtgZI | GCGATG | 1 cut(s) | 3126 |
| BtsI | GCAGTG | 1 cut(s) | 3438 |
| BtsIMutI | CAGTG | 5 cut(s) | 345, 2070, 3438, 4293, 4453 |
| BveI | ACCTGC | 3 cut(s) | 2144, 2268, 2808 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1652, 1885, 3086 |
| CciI | TCATGA | 2 cut(s) | 3028, 4792 |
| CfoI | GCGC | 5 cut(s) | 271, 427, 429, 469, 550 |
| Cfr10I | RCCGGY | 3 cut(s) | 46, 565, 4245 |
| Cfr13I | GGNCC | 7 cut(s) | 231, 232, 766, 1014, 1882, 2156, 3290 |
| ClaI | ATCGAT | 1 cut(s) | 192 |
| CseI | GACGC | 5 cut(s) | 92, 116, 343, 2084, 4687 |
| CspAI | ACCGGT | 1 cut(s) | 4245 |
| DraI | TTTAAA | 1 cut(s) | 2295 |
| DraIII | CACNNNGTG | 2 cut(s) | 351, 1810 |
| EaeI | YGGCCR | 5 cut(s) | 72, 498, 621, 1643, 3831 |
| EagI | CGGCCG | 1 cut(s) | 621 |
| Eam1104I | CTCTTC | 7 cut(s) | 923, 2196, 2345, 2399, 2409, 3126, 3159 |
| EarI | CTCTTC | 7 cut(s) | 923, 2196, 2345, 2399, 2409, 3126, 3159 |
| EciI | GGCGGA | 1 cut(s) | 548 |
| EclXI | CGGCCG | 1 cut(s) | 621 |
| Eco130I | CCWWGG | 2 cut(s) | 264, 3484 |
| Eco24I | GRGCYC | 2 cut(s) | 138, 235 |
| Eco32I | GATATC | 2 cut(s) | 615, 4693 |
| Eco47I | GGWCC | 5 cut(s) | 766, 1014, 1882, 2156, 3290 |
| Eco52I | CGGCCG | 1 cut(s) | 621 |
| Eco57I | CTGAAG | 4 cut(s) | 2216, 2520, 4233, 4563 |
| Eco72I | CACGTG | 1 cut(s) | 643 |
| Eco88I | CYCGRG | 2 cut(s) | 2423, 3600 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3758 |
| EcoO109I | RGGNCCY | 4 cut(s) | 232, 766, 1014, 1882 |
| EcoRI | GAATTC | 2 cut(s) | 1686, 3504 |
| EcoRV | GATATC | 2 cut(s) | 615, 4693 |
| EcoT14I | CCWWGG | 2 cut(s) | 264, 3484 |
| EcoT22I | ATGCAT | 3 cut(s) | 1378, 2005, 4102 |
| EcoT38I | GRGCYC | 2 cut(s) | 138, 235 |
| ErhI | CCWWGG | 2 cut(s) | 264, 3484 |
| Esp3I | CGTCTC | 3 cut(s) | 75, 102, 2644 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1071, 1103, 2724, 2756, 3738, 3770 |
| FaqI | GGGAC | 3 cut(s) | 1231, 1873, 3303 |
| FauI | CCCGC | 7 cut(s) | 197, 222, 243, 537, 583, 2796, 4550 |
| FauNDI | CATATG | 1 cut(s) | 1251 |
| FblI | GTMKAC | 1 cut(s) | 4418 |
| FriOI | GRGCYC | 2 cut(s) | 138, 235 |
| FspBI | CTAG | 8 cut(s) | 963, 1533, 1841, 2163, 2786, 3509, 3779, 4921 |
| GlaI | GCGC | 5 cut(s) | 270, 426, 428, 468, 549 |
| GsaI | CCCAGC | 2 cut(s) | 1855, 4852 |
| HaeII | RGCGCY | 2 cut(s) | 272, 551 |
| HapII | CCGG | 6 cut(s) | 47, 68, 566, 833, 3848, 4246 |
| HgaI | GACGC | 5 cut(s) | 92, 116, 343, 2084, 4687 |
| HhaI | GCGC | 5 cut(s) | 271, 427, 429, 469, 550 |
| Hin1I | GRCGYC | 2 cut(s) | 84, 108 |
| Hin6I | GCGC | 5 cut(s) | 269, 425, 427, 467, 548 |
| HinP1I | GCGC | 5 cut(s) | 269, 425, 427, 467, 548 |
| HincII | GTYRAC | 3 cut(s) | 3304, 3412, 3481 |
| HindII | GTYRAC | 3 cut(s) | 3304, 3412, 3481 |
| HindIII | AAGCTT | 3 cut(s) | 1673, 2383, 2738 |
| HpaI | GTTAAC | 3 cut(s) | 3304, 3412, 3481 |
| HpaII | CCGG | 6 cut(s) | 47, 68, 566, 833, 3848, 4246 |
| HphI | GGTGA | 9 cut(s) | 323, 790, 935, 1762, 3106, 3953, 4235, 4514, 4849 |
| Hpy99I | CGWCG | 6 cut(s) | 92, 128, 380, 440, 955, 3543 |
| HpyCH4IV | ACGT | 3 cut(s) | 642, 3188, 3796 |
| HpySE526I | ACGT | 3 cut(s) | 642, 3188, 3796 |
| Hsp92I | GRCGYC | 2 cut(s) | 84, 108 |
| HspAI | GCGC | 5 cut(s) | 269, 425, 427, 467, 548 |
| KroI | GCCGGC | 1 cut(s) | 46 |
| KroNI | GCCGGC | 1 cut(s) | 48 |
| KspAI | GTTAAC | 3 cut(s) | 3304, 3412, 3481 |
| LguI | GCTCTTC | 1 cut(s) | 2409 |
| LmnI | GCTCC | 9 cut(s) | 31, 1191, 1420, 1813, 1844, 2086, 2674, 3310, 4490 |
| MaeI | CTAG | 8 cut(s) | 963, 1533, 1841, 2163, 2786, 3509, 3779, 4921 |
| MaeII | ACGT | 3 cut(s) | 642, 3188, 3796 |
| MaeIII | GTNAC | 7 cut(s) | 757, 1083, 2068, 2362, 2548, 2564, 2710 |
| MbiI | CCGCTC | 3 cut(s) | 229, 242, 544 |
| MfeI | CAATTG | 4 cut(s) | 908, 1614, 3263, 4387 |
| MflI | RGATCY | 3 cut(s) | 2326, 2818, 4717 |
| MhlI | GDGCHC | 7 cut(s) | 138, 235, 347, 642, 2809, 3466, 4453 |
| MlsI | TGGCCA | 2 cut(s) | 1645, 3833 |
| MluNI | TGGCCA | 2 cut(s) | 1645, 3833 |
| MlyI | GAGTC | 7 cut(s) | 296, 345, 413, 1253, 2399, 4057, 4409 |
| MmeI | TCCRAC | 3 cut(s) | 1350, 1369, 2183 |
| Mox20I | TGGCCA | 2 cut(s) | 1645, 3833 |
| Mph1103I | ATGCAT | 3 cut(s) | 1378, 2005, 4102 |
| MreI | CGCCGGCG | 1 cut(s) | 46 |
| MroNI | GCCGGC | 1 cut(s) | 46 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1674, 1686, 2229, 2418 |
| MscI | TGGCCA | 2 cut(s) | 1645, 3833 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1825, 1896, 2041, 3030, 3581, 4038, 4797 |
| Msp20I | TGGCCA | 2 cut(s) | 1645, 3833 |
| MspA1I | CMGCKG | 5 cut(s) | 298, 397, 872, 1022, 3127 |
| MspCI | CTTAAG | 2 cut(s) | 1088, 1109 |
| MspI | CCGG | 6 cut(s) | 47, 68, 566, 833, 3848, 4246 |
| MunI | CAATTG | 4 cut(s) | 908, 1614, 3263, 4387 |
| Mva1269I | GAATGC | 5 cut(s) | 227, 1398, 2724, 3143, 4342 |
| MvnI | CGCG | 4 cut(s) | 31, 413, 427, 467 |
| NaeI | GCCGGC | 1 cut(s) | 48 |
| NciI | CCSGG | 2 cut(s) | 68, 3848 |
| NdeI | CATATG | 1 cut(s) | 1251 |
| NgoMIV | GCCGGC | 1 cut(s) | 46 |
| NmeAIII | GCCGAG | 4 cut(s) | 157, 299, 455, 2430 |
| NmuCI | GTSAC | 5 cut(s) | 757, 2068, 2362, 2548, 2564 |
| NsiI | ATGCAT | 3 cut(s) | 1378, 2005, 4102 |
| NspI | RCATGY | 6 cut(s) | 1277, 2052, 2631, 4037, 4604, 4638 |
| NspV | TTCGAA | 1 cut(s) | 4368 |
| OliI | CACNNNNGTG | 2 cut(s) | 1825, 3581 |
| PaeR7I | CTCGAG | 1 cut(s) | 3600 |
| PagI | TCATGA | 2 cut(s) | 3028, 4792 |
| PaqCI | CACCTGC | 1 cut(s) | 2268 |
| PauI | GCGCGC | 1 cut(s) | 425 |
| PciI | ACATGT | 3 cut(s) | 2048, 2627, 4600 |
| PciSI | GCTCTTC | 1 cut(s) | 2409 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 129, 452 |
| PctI | GAATGC | 5 cut(s) | 227, 1398, 2724, 3143, 4342 |
| PdiI | GCCGGC | 1 cut(s) | 48 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1674, 1686, 2229, 2418 |
| Pfl23II | CGTACG | 1 cut(s) | 3766 |
| PflFI | GACNNNGTC | 1 cut(s) | 86 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1810, 2165 |
| PfoI | TCCNGGA | 2 cut(s) | 2141, 4185 |
| PinAI | ACCGGT | 1 cut(s) | 4245 |
| Ple19I | CGATCG | 3 cut(s) | 417, 459, 558 |
| PleI | GAGTC | 7 cut(s) | 295, 344, 413, 1252, 2398, 4056, 4408 |
| PmaCI | CACGTG | 1 cut(s) | 643 |
| PmlI | CACGTG | 1 cut(s) | 643 |
| PpsI | GAGTC | 7 cut(s) | 295, 344, 413, 1252, 2398, 4056, 4408 |
| Ppu21I | YACGTR | 1 cut(s) | 643 |
| PpuMI | RGGWCCY | 3 cut(s) | 766, 1014, 1882 |
| PscI | ACATGT | 3 cut(s) | 2048, 2627, 4600 |
| PshBI | ATTAAT | 1 cut(s) | 2514 |
| Psp1406I | AACGTT | 1 cut(s) | 3188 |
| Psp5II | RGGWCCY | 3 cut(s) | 766, 1014, 1882 |
| PspCI | CACGTG | 1 cut(s) | 643 |
| PspFI | CCCAGC | 2 cut(s) | 1851, 4848 |
| PspLI | CGTACG | 1 cut(s) | 3766 |
| PspOMI | GGGCCC | 1 cut(s) | 231 |
| PspPI | GGNCC | 7 cut(s) | 231, 232, 766, 1014, 1882, 2156, 3290 |
| PspPPI | RGGWCCY | 3 cut(s) | 766, 1014, 1882 |
| PstI | CTGCAG | 4 cut(s) | 1387, 2265, 3433, 4108 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1652, 1885, 3086 |
| PsuI | RGATCY | 3 cut(s) | 2326, 2818, 4717 |
| PsyI | GACNNNGTC | 1 cut(s) | 86 |
| PteI | GCGCGC | 1 cut(s) | 425 |
| PvuI | CGATCG | 3 cut(s) | 417, 459, 558 |
| PvuII | CAGCTG | 1 cut(s) | 3127 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1825, 1896, 2041, 3030, 3581, 4038, 4797 |
| SapI | GCTCTTC | 1 cut(s) | 2409 |
| Sau96I | GGNCC | 7 cut(s) | 231, 232, 766, 1014, 1882, 2156, 3290 |
| ScaI | AGTACT | 1 cut(s) | 3020 |
| SchI | GAGTC | 7 cut(s) | 296, 345, 413, 1253, 2399, 4057, 4409 |
| SduI | GDGCHC | 7 cut(s) | 138, 235, 347, 642, 2809, 3466, 4453 |
| SfcI | CTRYAG | 7 cut(s) | 1383, 1775, 2261, 3429, 3810, 4104, 4786 |
| Sfr274I | CTCGAG | 1 cut(s) | 3600 |
| SfuI | TTCGAA | 1 cut(s) | 4368 |
| SgrAI | CRCCGGYG | 1 cut(s) | 46 |
| SinI | GGWCC | 5 cut(s) | 766, 1014, 1882, 2156, 3290 |
| SlaI | CTCGAG | 1 cut(s) | 3600 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1825, 1896, 2041, 3030, 3581, 4038, 4797 |
| SmlI | CTYRAG | 6 cut(s) | 1000, 1088, 1109, 1868, 3600, 4412 |
| SmoI | CTYRAG | 6 cut(s) | 1000, 1088, 1109, 1868, 3600, 4412 |
| SpeI | ACTAGT | 1 cut(s) | 2162 |
| SspI | AATATT | 2 cut(s) | 682, 2512 |
| SspMI | CTAG | 8 cut(s) | 963, 1533, 1841, 2163, 2786, 3509, 3779, 4921 |
| StyI | CCWWGG | 2 cut(s) | 264, 3484 |
| TaiI | ACGT | 3 cut(s) | 645, 3191, 3799 |
| TaqII | GACCGA | 2 cut(s) | 1032, 2757 |
| TatI | WGTACW | 5 cut(s) | 1541, 2045, 2611, 2632, 3018 |
| TauI | GCSGC | 8 cut(s) | 53, 212, 250, 277, 400, 500, 802, 875 |
| TscAI | CASTG | 5 cut(s) | 352, 2077, 3438, 4293, 4453 |
| TseFI | GTSAC | 5 cut(s) | 757, 2068, 2362, 2548, 2564 |
| Tsp45I | GTSAC | 5 cut(s) | 757, 2068, 2362, 2548, 2564 |
| TspGWI | ACGGA | 6 cut(s) | 776, 1415, 2668, 2710, 3160, 3556 |
| TspRI | CASTG | 5 cut(s) | 352, 2077, 3438, 4293, 4453 |
| Tth111I | GACNNNGTC | 1 cut(s) | 86 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1810, 2165 |
| Vha464I | CTTAAG | 2 cut(s) | 1088, 1109 |
| VpaK11BI | GGWCC | 5 cut(s) | 766, 1014, 1882, 2156, 3290 |
| VspI | ATTAAT | 1 cut(s) | 2514 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3758 |
| XapI | RAATTY | 5 cut(s) | 709, 1427, 1686, 3074, 3504 |
| XbaI | TCTAGA | 1 cut(s) | 3508 |
| XceI | RCATGY | 6 cut(s) | 1277, 2052, 2631, 4037, 4604, 4638 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1583, 4354, 4735 |
| XhoI | CTCGAG | 1 cut(s) | 3600 |
| XmiI | GTMKAC | 1 cut(s) | 4418 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1674, 1686, 2229, 2418 |
| XspI | CTAG | 8 cut(s) | 963, 1533, 1841, 2163, 2786, 3509, 3779, 4921 |
| ZrmI | AGTACT | 1 cut(s) | 3020 |
| Zsp2I | ATGCAT | 3 cut(s) | 1378, 2005, 4102 |