Protein of unknown function (DUF627)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47890 AT3G47890 AT3G47910 AT3G47910 |
| fragaria_vesca | FvH4_5g15740 FvH4_5g15740 |
| malus_domestica | MD06G1185800.v1.1 MD14G1192000.v1.1 |
| prunus_persica | Prupe.5G184600_v2.0.a1 Prupe.5G184600_v2.0.a1 |
| pyrus_communis | pycom06g16520 pycom14g15970 |
| rosa_chinensis | RchiOBHm_Chr7g0180371 |
| rosa_laevigata | RLG00000005273 |
| rosa_multiflora | Rmu_sc0003526.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00272950 |
| rosa_rugosa | Rorug06G0432500 |
| rosa_samantha | Rh7AG033100 Rh7BG033000 Rh7CG034900 Rh7DG033500 |
| rosa_wichuraiana | Rw7G002760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2259 |
| Acc36I | ACCTGC | 3 cut(s) | 2135, 2259, 2799 |
| AccB1I | GGYRCC | 3 cut(s) | 895, 3301, 3604 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1801, 2156 |
| AccBSI | CCGCTC | 1 cut(s) | 223 |
| AccII | CGCG | 6 cut(s) | 23, 31, 246, 407, 419, 421 |
| AclWI | GGATC | 8 cut(s) | 560, 1404, 2817, 4088, 4101, 4577, 4757, 4770 |
| AcoI | YGGCCR | 3 cut(s) | 794, 1374, 1634 |
| AcsI | RAATTY | 6 cut(s) | 703, 991, 1677, 1862, 3525, 3862 |
| AcuI | CTGAAG | 2 cut(s) | 2207, 4278 |
| AcvI | CACGTG | 1 cut(s) | 637 |
| AcyI | GRCGYC | 3 cut(s) | 348, 824, 3302 |
| AdeI | CACNNNGTG | 1 cut(s) | 2264 |
| AfeI | AGCGCT | 2 cut(s) | 293, 543 |
| AflII | CTTAAG | 1 cut(s) | 1103 |
| AflIII | ACRYGT | 2 cut(s) | 2039, 4645 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 190 |
| AhlI | ACTAGT | 1 cut(s) | 2153 |
| AjnI | CCWGG | 8 cut(s) | 333, 788, 1767, 2132, 3360, 4230, 4303, 4758 |
| AleI | CACNNNNGTG | 2 cut(s) | 1816, 3602 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2088, 2120 |
| Alw21I | GWGCWC | 5 cut(s) | 1767, 3469, 3487, 4498, 4775 |
| Alw44I | GTGCAC | 1 cut(s) | 3483 |
| AlwI | GGATC | 8 cut(s) | 560, 1404, 2817, 4088, 4101, 4577, 4757, 4770 |
| Ama87I | CYCGRG | 2 cut(s) | 1441, 4586 |
| Aor51HI | AGCGCT | 2 cut(s) | 293, 543 |
| AoxI | GGCC | 8 cut(s) | 225, 261, 489, 794, 1374, 1634, 3804, 4756 |
| ApaI | GGGCCC | 1 cut(s) | 229 |
| ApaLI | GTGCAC | 1 cut(s) | 3483 |
| ApoI | RAATTY | 6 cut(s) | 703, 991, 1677, 1862, 3525, 3862 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1280, 1312 |
| AseI | ATTAAT | 1 cut(s) | 2505 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1677, 2220, 2385, 2409, 3408 |
| AspLEI | GCGC | 7 cut(s) | 246, 294, 421, 423, 544, 1659, 3304 |
| AspS9I | GGNCC | 8 cut(s) | 94, 225, 226, 760, 1008, 1414, 2147, 3282 |
| AsuC2I | CCSGG | 3 cut(s) | 952, 4292, 4350 |
| AvaI | CYCGRG | 2 cut(s) | 1441, 4586 |
| AvaII | GGWCC | 6 cut(s) | 94, 760, 1008, 1414, 2147, 3282 |
| AxyI | CCTNAGG | 1 cut(s) | 1419 |
| BaeGI | GKGCMC | 6 cut(s) | 229, 341, 636, 900, 2800, 3487 |
| BalI | TGGCCA | 1 cut(s) | 1636 |
| BamHI | GGATCC | 2 cut(s) | 4093, 4762 |
| BanI | GGYRCC | 3 cut(s) | 895, 3301, 3604 |
| BanII | GRGCYC | 2 cut(s) | 229, 1767 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2286, 2318, 4109, 4141 |
| BbrPI | CACGTG | 1 cut(s) | 637 |
| BbsI | GAAGAC | 3 cut(s) | 3386, 4277, 4682 |
| Bbv12I | GWGCWC | 5 cut(s) | 1767, 3469, 3487, 4498, 4775 |
| BbvCI | CCTCAGC | 1 cut(s) | 2441 |
| BceAI | ACGGC | 4 cut(s) | 202, 249, 413, 3791 |
| BciT130I | CCWGG | 8 cut(s) | 335, 790, 1769, 2134, 3362, 4232, 4305, 4760 |
| BciVI | GTATCC | 1 cut(s) | 4221 |
| BcnI | CCSGG | 3 cut(s) | 952, 4292, 4350 |
| BcuI | ACTAGT | 1 cut(s) | 2153 |
| BfaI | CTAG | 7 cut(s) | 65, 957, 1527, 2154, 2777, 3530, 4966 |
| BfmI | CTRYAG | 4 cut(s) | 2252, 3888, 4149, 4831 |
| BfoI | RGCGCY | 3 cut(s) | 295, 545, 3305 |
| BfrI | CTTAAG | 1 cut(s) | 1103 |
| BfuAI | ACCTGC | 3 cut(s) | 2135, 2259, 2799 |
| BfuI | GTATCC | 1 cut(s) | 4221 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 233 |
| BglII | AGATCT | 1 cut(s) | 2317 |
| BlpI | GCTNAGC | 3 cut(s) | 2669, 3213, 3231 |
| Bme18I | GGWCC | 6 cut(s) | 94, 760, 1008, 1414, 2147, 3282 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 190 |
| BmeT110I | CYCGRG | 2 cut(s) | 1441, 4586 |
| BmgT120I | GGNCC | 8 cut(s) | 94, 225, 226, 760, 1008, 1414, 2147, 3282 |
| BmrI | ACTGGG | 1 cut(s) | 3393 |
| BmuI | ACTGGG | 1 cut(s) | 3393 |
| BpiI | GAAGAC | 3 cut(s) | 3386, 4277, 4682 |
| BpmI | CTGGAG | 2 cut(s) | 1751, 3420 |
| Bpu10I | CCTNAGC | 3 cut(s) | 650, 1391, 2441 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 2669, 3213, 3231 |
| BpuEI | CTTGAG | 5 cut(s) | 2435, 3606, 3703, 4156, 4442 |
| BpuMI | CCSGG | 3 cut(s) | 952, 4292, 4350 |
| Bsa29I | ATCGAT | 1 cut(s) | 149 |
| BsaAI | YACGTR | 2 cut(s) | 637, 2183 |
| BsaBI | GATNNNNATC | 4 cut(s) | 155, 2216, 4069, 4736 |
| BsaHI | GRCGYC | 3 cut(s) | 348, 824, 3302 |
| BsaJI | CCNNGG | 9 cut(s) | 258, 334, 1455, 1795, 2592, 2940, 3505, 4349, 4587 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 69, 99, 761, 791 |
| Bse118I | RCCGGY | 1 cut(s) | 46 |
| Bse1I | ACTGG | 6 cut(s) | 2710, 3047, 3123, 3388, 3437, 3443 |
| Bse21I | CCTNAGG | 1 cut(s) | 1419 |
| Bse3DI | GCAATG | 3 cut(s) | 3109, 4147, 4819 |
| Bse8I | GATNNNNATC | 4 cut(s) | 155, 2216, 4069, 4736 |
| BseBI | CCWGG | 8 cut(s) | 335, 790, 1769, 2134, 3362, 4232, 4305, 4760 |
| BseCI | ATCGAT | 1 cut(s) | 149 |
| BseDI | CCNNGG | 9 cut(s) | 258, 334, 1455, 1795, 2592, 2940, 3505, 4349, 4587 |
| BseJI | GATNNNNATC | 4 cut(s) | 155, 2216, 4069, 4736 |
| BseMI | GCAATG | 3 cut(s) | 3109, 4147, 4819 |
| BseNI | ACTGG | 6 cut(s) | 2710, 3047, 3123, 3388, 3437, 3443 |
| BsePI | GCGCGC | 1 cut(s) | 419 |
| BseRI | GAGGAG | 5 cut(s) | 605, 845, 2916, 3548, 3604 |
| BseSI | GKGCMC | 6 cut(s) | 229, 341, 636, 900, 2800, 3487 |
| BseX3I | CGGCCG | 1 cut(s) | 1374 |
| BseYI | CCCAGC | 2 cut(s) | 97, 4893 |
| BsgI | GTGCAG | 1 cut(s) | 4542 |
| Bsh1236I | CGCG | 6 cut(s) | 23, 31, 246, 407, 419, 421 |
| Bsh1285I | CGRYCG | 6 cut(s) | 177, 411, 453, 552, 1377, 2762 |
| BshFI | GGCC | 8 cut(s) | 227, 263, 491, 796, 1376, 1636, 3806, 4758 |
| BshNI | GGYRCC | 3 cut(s) | 895, 3301, 3604 |
| BshVI | ATCGAT | 1 cut(s) | 149 |
| BsiEI | CGRYCG | 6 cut(s) | 177, 411, 453, 552, 1377, 2762 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1767, 3469, 3487, 4498, 4775 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1441, 4586 |
| BsiSI | CCGG | 5 cut(s) | 47, 827, 951, 4291, 4349 |
| BsiWI | CGTACG | 2 cut(s) | 2183, 3808 |
| BslFI | GGGAC | 4 cut(s) | 80, 1225, 1864, 3295 |
| BsmBI | CGTCTC | 1 cut(s) | 72 |
| BsmFI | GGGAC | 4 cut(s) | 80, 1225, 1864, 3295 |
| BsmI | GAATGC | 6 cut(s) | 221, 1392, 2715, 3408, 4387, 4853 |
| BsnI | GGCC | 8 cut(s) | 227, 263, 491, 796, 1376, 1636, 3806, 4758 |
| BsoBI | CYCGRG | 2 cut(s) | 1441, 4586 |
| Bsp120I | GGGCCC | 1 cut(s) | 225 |
| Bsp1407I | TGTACA | 1 cut(s) | 2036 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 2669, 3213, 3231 |
| Bsp19I | CCATGG | 1 cut(s) | 1795 |
| BspANI | GGCC | 8 cut(s) | 227, 263, 491, 796, 1376, 1636, 3806, 4758 |
| BspDI | ATCGAT | 1 cut(s) | 149 |
| BspFNI | CGCG | 6 cut(s) | 23, 31, 246, 407, 419, 421 |
| BspHI | TCATGA | 3 cut(s) | 273, 2749, 4837 |
| BspMAI | CTGCAG | 2 cut(s) | 2256, 4153 |
| BspMI | ACCTGC | 3 cut(s) | 2135, 2259, 2799 |
| BspPI | GGATC | 8 cut(s) | 560, 1404, 2817, 4088, 4101, 4577, 4757, 4770 |
| BspQI | GCTCTTC | 1 cut(s) | 2400 |
| BspT107I | GGYRCC | 3 cut(s) | 895, 3301, 3604 |
| BspTI | CTTAAG | 1 cut(s) | 1103 |
| BsrBI | CCGCTC | 1 cut(s) | 223 |
| BsrDI | GCAATG | 3 cut(s) | 3109, 4147, 4819 |
| BsrFI | RCCGGY | 1 cut(s) | 46 |
| BsrGI | TGTACA | 1 cut(s) | 2036 |
| BsrI | ACTGG | 6 cut(s) | 2710, 3047, 3123, 3388, 3437, 3443 |
| BssAI | RCCGGY | 1 cut(s) | 46 |
| BssECI | CCNNGG | 9 cut(s) | 258, 334, 1455, 1795, 2592, 2940, 3505, 4349, 4587 |
| BssHII | GCGCGC | 1 cut(s) | 419 |
| BssNI | GRCGYC | 3 cut(s) | 348, 824, 3302 |
| BssT1I | CCWWGG | 6 cut(s) | 258, 1455, 1795, 2592, 2940, 3505 |
| Bst2UI | CCWGG | 8 cut(s) | 335, 790, 1769, 2134, 3362, 4232, 4305, 4760 |
| Bst6I | CTCTTC | 9 cut(s) | 714, 917, 2187, 2336, 2390, 2395, 2400, 3117, 4156 |
| BstACI | GRCGYC | 3 cut(s) | 348, 824, 3302 |
| BstAFI | CTTAAG | 1 cut(s) | 1103 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2873 |
| BstAUI | TGTACA | 1 cut(s) | 2036 |
| BstBAI | YACGTR | 2 cut(s) | 637, 2183 |
| BstDSI | CCRYGG | 1 cut(s) | 1795 |
| BstEII | GGTNACC | 2 cut(s) | 523, 3062 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 3519, 3800 |
| BstFNI | CGCG | 6 cut(s) | 23, 31, 246, 407, 419, 421 |
| BstH2I | RGCGCY | 3 cut(s) | 295, 545, 3305 |
| BstHHI | GCGC | 7 cut(s) | 246, 294, 421, 423, 544, 1659, 3304 |
| BstMCI | CGRYCG | 6 cut(s) | 177, 411, 453, 552, 1377, 2762 |
| BstNI | CCWGG | 8 cut(s) | 335, 790, 1769, 2134, 3362, 4232, 4305, 4760 |
| BstNSI | RCATGY | 7 cut(s) | 2043, 3016, 3263, 4082, 4088, 4649, 4683 |
| BstPI | GGTNACC | 2 cut(s) | 523, 3062 |
| BstSFI | CTRYAG | 4 cut(s) | 2252, 3888, 4149, 4831 |
| BstSLI | GKGCMC | 6 cut(s) | 229, 341, 636, 900, 2800, 3487 |
| BstSNI | TACGTA | 1 cut(s) | 2183 |
| BstUI | CGCG | 6 cut(s) | 23, 31, 246, 407, 419, 421 |
| BstV2I | GAAGAC | 3 cut(s) | 3386, 4277, 4682 |
| BstX2I | RGATCY | 4 cut(s) | 2317, 2809, 4093, 4762 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1775, 1889 |
| BstYI | RGATCY | 4 cut(s) | 2317, 2809, 4093, 4762 |
| BstZI | CGGCCG | 1 cut(s) | 1374 |
| Bsu15I | ATCGAT | 1 cut(s) | 149 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1419 |
| BsuI | GTATCC | 1 cut(s) | 4221 |
| BsuRI | GGCC | 8 cut(s) | 227, 263, 491, 796, 1376, 1636, 3806, 4758 |
| BsuTUI | ATCGAT | 1 cut(s) | 149 |
| BtgI | CCRYGG | 1 cut(s) | 1795 |
| BtsI | GCAGTG | 3 cut(s) | 2316, 3356, 4128 |
| BtsIMutI | CAGTG | 9 cut(s) | 339, 753, 2064, 2316, 3356, 3444, 4128, 4338, 4747 |
| BveI | ACCTGC | 3 cut(s) | 2135, 2259, 2799 |
| CciI | TCATGA | 3 cut(s) | 273, 2749, 4837 |
| CfoI | GCGC | 7 cut(s) | 246, 294, 421, 423, 544, 1659, 3304 |
| Cfr10I | RCCGGY | 1 cut(s) | 46 |
| Cfr13I | GGNCC | 8 cut(s) | 94, 225, 226, 760, 1008, 1414, 2147, 3282 |
| ClaI | ATCGAT | 1 cut(s) | 149 |
| CseI | GACGC | 3 cut(s) | 89, 337, 832 |
| CsiI | ACCWGGT | 1 cut(s) | 4303 |
| DinI | GGCGCC | 1 cut(s) | 3303 |
| DraI | TTTAAA | 3 cut(s) | 2481, 3972, 4548 |
| DraIII | CACNNNGTG | 1 cut(s) | 2264 |
| DriI | GACNNNNNGTC | 1 cut(s) | 190 |
| EaeI | YGGCCR | 3 cut(s) | 794, 1374, 1634 |
| EagI | CGGCCG | 1 cut(s) | 1374 |
| Eam1104I | CTCTTC | 9 cut(s) | 714, 917, 2187, 2336, 2390, 2395, 2400, 3117, 4156 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 190 |
| EarI | CTCTTC | 9 cut(s) | 714, 917, 2187, 2336, 2390, 2395, 2400, 3117, 4156 |
| Ecl136II | GAGCTC | 1 cut(s) | 1765 |
| EclXI | CGGCCG | 1 cut(s) | 1374 |
| Eco105I | TACGTA | 1 cut(s) | 2183 |
| Eco130I | CCWWGG | 6 cut(s) | 258, 1455, 1795, 2592, 2940, 3505 |
| Eco147I | AGGCCT | 1 cut(s) | 263 |
| Eco24I | GRGCYC | 2 cut(s) | 229, 1767 |
| Eco32I | GATATC | 3 cut(s) | 609, 3885, 4738 |
| Eco47I | GGWCC | 6 cut(s) | 94, 760, 1008, 1414, 2147, 3282 |
| Eco47III | AGCGCT | 2 cut(s) | 293, 543 |
| Eco52I | CGGCCG | 1 cut(s) | 1374 |
| Eco53kI | GAGCTC | 1 cut(s) | 1765 |
| Eco57I | CTGAAG | 2 cut(s) | 2207, 4278 |
| Eco72I | CACGTG | 1 cut(s) | 637 |
| Eco81I | CCTNAGG | 1 cut(s) | 1419 |
| Eco88I | CYCGRG | 2 cut(s) | 1441, 4586 |
| Eco91I | GGTNACC | 2 cut(s) | 523, 3062 |
| EcoICRI | GAGCTC | 1 cut(s) | 1765 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 3519, 3800 |
| EcoO109I | RGGNCCY | 5 cut(s) | 226, 760, 1008, 1414, 3282 |
| EcoO65I | GGTNACC | 2 cut(s) | 523, 3062 |
| EcoRI | GAATTC | 2 cut(s) | 1677, 3525 |
| EcoRII | CCWGG | 8 cut(s) | 333, 788, 1767, 2132, 3360, 4230, 4303, 4758 |
| EcoRV | GATATC | 3 cut(s) | 609, 3885, 4738 |
| EcoT14I | CCWWGG | 6 cut(s) | 258, 1455, 1795, 2592, 2940, 3505 |
| EcoT22I | ATGCAT | 4 cut(s) | 1996, 3018, 3261, 4147 |
| EcoT38I | GRGCYC | 2 cut(s) | 229, 1767 |
| EgeI | GGCGCC | 1 cut(s) | 3303 |
| EheI | GGCGCC | 1 cut(s) | 3303 |
| ErhI | CCWWGG | 6 cut(s) | 258, 1455, 1795, 2592, 2940, 3505 |
| Esp3I | CGTCTC | 1 cut(s) | 72 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1065, 1097, 2397, 2429, 3780, 3812 |
| FaqI | GGGAC | 4 cut(s) | 80, 1225, 1864, 3295 |
| FauI | CCCGC | 4 cut(s) | 61, 216, 239, 2787 |
| FauNDI | CATATG | 2 cut(s) | 1245, 1269 |
| FriOI | GRGCYC | 2 cut(s) | 229, 1767 |
| FspBI | CTAG | 7 cut(s) | 65, 957, 1527, 2154, 2777, 3530, 4966 |
| GlaI | GCGC | 7 cut(s) | 245, 293, 420, 422, 543, 1658, 3303 |
| GsaI | CCCAGC | 2 cut(s) | 101, 4897 |
| GsuI | CTGGAG | 2 cut(s) | 1751, 3420 |
| HaeII | RGCGCY | 3 cut(s) | 295, 545, 3305 |
| HaeIII | GGCC | 8 cut(s) | 227, 263, 491, 796, 1376, 1636, 3806, 4758 |
| HapII | CCGG | 5 cut(s) | 47, 827, 951, 4291, 4349 |
| HgaI | GACGC | 3 cut(s) | 89, 337, 832 |
| HhaI | GCGC | 7 cut(s) | 246, 294, 421, 423, 544, 1659, 3304 |
| Hin1I | GRCGYC | 3 cut(s) | 348, 824, 3302 |
| Hin6I | GCGC | 7 cut(s) | 244, 292, 419, 421, 542, 1657, 3302 |
| HinP1I | GCGC | 7 cut(s) | 244, 292, 419, 421, 542, 1657, 3302 |
| HincII | GTYRAC | 5 cut(s) | 1318, 3502, 3633, 3652, 4811 |
| HindII | GTYRAC | 5 cut(s) | 1318, 3502, 3633, 3652, 4811 |
| HindIII | AAGCTT | 4 cut(s) | 2374, 2729, 3167, 3338 |
| HpaI | GTTAAC | 1 cut(s) | 3502 |
| HpaII | CCGG | 5 cut(s) | 47, 827, 951, 4291, 4349 |
| Hpy99I | CGWCG | 5 cut(s) | 374, 503, 566, 616, 619 |
| HpyCH4IV | ACGT | 3 cut(s) | 636, 2182, 3654 |
| HpySE526I | ACGT | 3 cut(s) | 636, 2182, 3654 |
| Hsp92I | GRCGYC | 3 cut(s) | 348, 824, 3302 |
| HspAI | GCGC | 7 cut(s) | 244, 292, 419, 421, 542, 1657, 3302 |
| KasI | GGCGCC | 1 cut(s) | 3301 |
| KflI | GGGWCCC | 1 cut(s) | 3282 |
| KroI | GCCGGC | 1 cut(s) | 46 |
| KroNI | GCCGGC | 1 cut(s) | 48 |
| KspAI | GTTAAC | 1 cut(s) | 3502 |
| LguI | GCTCTTC | 1 cut(s) | 2400 |
| LmnI | GCTCC | 7 cut(s) | 31, 1654, 1770, 1804, 1835, 3364, 4535 |
| MabI | ACCWGGT | 1 cut(s) | 4303 |
| MaeI | CTAG | 7 cut(s) | 65, 957, 1527, 2154, 2777, 3530, 4966 |
| MaeII | ACGT | 3 cut(s) | 636, 2182, 3654 |
| MbiI | CCGCTC | 1 cut(s) | 223 |
| MfeI | CAATTG | 4 cut(s) | 902, 2165, 3368, 4432 |
| MflI | RGATCY | 4 cut(s) | 2317, 2809, 4093, 4762 |
| MlsI | TGGCCA | 1 cut(s) | 1636 |
| MluNI | TGGCCA | 1 cut(s) | 1636 |
| Mly113I | GGCGCC | 1 cut(s) | 3302 |
| MlyI | GAGTC | 6 cut(s) | 125, 290, 339, 407, 1247, 4454 |
| MmeI | TCCRAC | 3 cut(s) | 1169, 1363, 2174 |
| Mox20I | TGGCCA | 1 cut(s) | 1636 |
| Mph1103I | ATGCAT | 4 cut(s) | 1996, 3018, 3261, 4147 |
| MreI | CGCCGGCG | 1 cut(s) | 46 |
| MroNI | GCCGGC | 1 cut(s) | 46 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1677, 2220, 2385, 2409, 3408 |
| MscI | TGGCCA | 1 cut(s) | 1636 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1816, 1887, 2032, 3021, 3602, 4083, 4842 |
| Msp20I | TGGCCA | 1 cut(s) | 1636 |
| MspA1I | CMGCKG | 3 cut(s) | 391, 658, 866 |
| MspCI | CTTAAG | 1 cut(s) | 1103 |
| MspI | CCGG | 5 cut(s) | 47, 827, 951, 4291, 4349 |
| MunI | CAATTG | 4 cut(s) | 902, 2165, 3368, 4432 |
| Mva1269I | GAATGC | 6 cut(s) | 221, 1392, 2715, 3408, 4387, 4853 |
| MvaI | CCWGG | 8 cut(s) | 335, 790, 1769, 2134, 3362, 4232, 4305, 4760 |
| MvnI | CGCG | 6 cut(s) | 23, 31, 246, 407, 419, 421 |
| NaeI | GCCGGC | 1 cut(s) | 48 |
| NarI | GGCGCC | 1 cut(s) | 3302 |
| NciI | CCSGG | 3 cut(s) | 952, 4292, 4350 |
| NcoI | CCATGG | 1 cut(s) | 1795 |
| NdeI | CATATG | 2 cut(s) | 1245, 1269 |
| NgoMIV | GCCGGC | 1 cut(s) | 46 |
| NmeAIII | GCCGAG | 3 cut(s) | 179, 284, 293 |
| NsiI | ATGCAT | 4 cut(s) | 1996, 3018, 3261, 4147 |
| NspI | RCATGY | 7 cut(s) | 2043, 3016, 3263, 4082, 4088, 4649, 4683 |
| OliI | CACNNNNGTG | 2 cut(s) | 1816, 3602 |
| PaeI | GCATGC | 1 cut(s) | 3263 |
| PagI | TCATGA | 3 cut(s) | 273, 2749, 4837 |
| PaqCI | CACCTGC | 1 cut(s) | 2259 |
| PauI | GCGCGC | 1 cut(s) | 419 |
| PceI | AGGCCT | 1 cut(s) | 263 |
| PciI | ACATGT | 2 cut(s) | 2039, 4645 |
| PciSI | GCTCTTC | 1 cut(s) | 2400 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 120, 188, 446, 558, 1233 |
| PctI | GAATGC | 6 cut(s) | 221, 1392, 2715, 3408, 4387, 4853 |
| PdiI | GCCGGC | 1 cut(s) | 48 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1677, 2220, 2385, 2409, 3408 |
| Pfl23II | CGTACG | 2 cut(s) | 2183, 3808 |
| PflFI | GACNNNGTC | 1 cut(s) | 83 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1801, 2156 |
| PfoI | TCCNGGA | 3 cut(s) | 2132, 3360, 4230 |
| Ple19I | CGATCG | 4 cut(s) | 177, 411, 453, 552 |
| PleI | GAGTC | 6 cut(s) | 125, 289, 338, 407, 1246, 4453 |
| PluTI | GGCGCC | 1 cut(s) | 3305 |
| PmaCI | CACGTG | 1 cut(s) | 637 |
| PmlI | CACGTG | 1 cut(s) | 637 |
| PpsI | GAGTC | 6 cut(s) | 125, 289, 338, 407, 1246, 4453 |
| Ppu21I | YACGTR | 2 cut(s) | 637, 2183 |
| PpuMI | RGGWCCY | 4 cut(s) | 760, 1008, 1414, 3282 |
| PscI | ACATGT | 2 cut(s) | 2039, 4645 |
| PshBI | ATTAAT | 1 cut(s) | 2505 |
| Psp124BI | GAGCTC | 1 cut(s) | 1767 |
| Psp5II | RGGWCCY | 4 cut(s) | 760, 1008, 1414, 3282 |
| Psp6I | CCWGG | 8 cut(s) | 333, 788, 1767, 2132, 3360, 4230, 4303, 4758 |
| PspCI | CACGTG | 1 cut(s) | 637 |
| PspEI | GGTNACC | 2 cut(s) | 523, 3062 |
| PspFI | CCCAGC | 2 cut(s) | 97, 4893 |
| PspGI | CCWGG | 8 cut(s) | 333, 788, 1767, 2132, 3360, 4230, 4303, 4758 |
| PspLI | CGTACG | 2 cut(s) | 2183, 3808 |
| PspOMI | GGGCCC | 1 cut(s) | 225 |
| PspPI | GGNCC | 8 cut(s) | 94, 225, 226, 760, 1008, 1414, 2147, 3282 |
| PspPPI | RGGWCCY | 4 cut(s) | 760, 1008, 1414, 3282 |
| PstI | CTGCAG | 2 cut(s) | 2256, 4153 |
| PsuI | RGATCY | 4 cut(s) | 2317, 2809, 4093, 4762 |
| PsyI | GACNNNGTC | 1 cut(s) | 83 |
| PteI | GCGCGC | 1 cut(s) | 419 |
| PvuI | CGATCG | 4 cut(s) | 177, 411, 453, 552 |
| PvuII | CAGCTG | 2 cut(s) | 658, 866 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1816, 1887, 2032, 3021, 3602, 4083, 4842 |
| SacI | GAGCTC | 1 cut(s) | 1767 |
| SapI | GCTCTTC | 1 cut(s) | 2400 |
| Sau96I | GGNCC | 8 cut(s) | 94, 225, 226, 760, 1008, 1414, 2147, 3282 |
| SchI | GAGTC | 6 cut(s) | 125, 290, 339, 407, 1247, 4454 |
| SexAI | ACCWGGT | 1 cut(s) | 4303 |
| SfcI | CTRYAG | 4 cut(s) | 2252, 3888, 4149, 4831 |
| SfoI | GGCGCC | 1 cut(s) | 3303 |
| SgrAI | CRCCGGYG | 1 cut(s) | 46 |
| SinI | GGWCC | 6 cut(s) | 94, 760, 1008, 1414, 2147, 3282 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1816, 1887, 2032, 3021, 3602, 4083, 4842 |
| SmlI | CTYRAG | 6 cut(s) | 1103, 2414, 3621, 3682, 4135, 4457 |
| SmoI | CTYRAG | 6 cut(s) | 1103, 2414, 3621, 3682, 4135, 4457 |
| SnaBI | TACGTA | 1 cut(s) | 2183 |
| SpeI | ACTAGT | 1 cut(s) | 2153 |
| SphI | GCATGC | 1 cut(s) | 3263 |
| SseBI | AGGCCT | 1 cut(s) | 263 |
| SspDI | GGCGCC | 1 cut(s) | 3301 |
| SspI | AATATT | 1 cut(s) | 2503 |
| SspMI | CTAG | 7 cut(s) | 65, 957, 1527, 2154, 2777, 3530, 4966 |
| SstI | GAGCTC | 1 cut(s) | 1767 |
| StuI | AGGCCT | 1 cut(s) | 263 |
| StyI | CCWWGG | 6 cut(s) | 258, 1455, 1795, 2592, 2940, 3505 |
| TaiI | ACGT | 3 cut(s) | 639, 2185, 3657 |
| TaqII | GACCGA | 3 cut(s) | 82, 542, 2748 |
| TatI | WGTACW | 5 cut(s) | 1535, 2036, 3009, 3353, 4461 |
| TscAI | CASTG | 9 cut(s) | 346, 760, 2071, 2316, 3356, 3444, 4135, 4338, 4747 |
| TspGWI | ACGGA | 4 cut(s) | 632, 640, 2001, 3747 |
| TspRI | CASTG | 9 cut(s) | 346, 760, 2071, 2316, 3356, 3444, 4135, 4338, 4747 |
| Tth111I | GACNNNGTC | 1 cut(s) | 83 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1801, 2156 |
| Vha464I | CTTAAG | 1 cut(s) | 1103 |
| VneI | GTGCAC | 1 cut(s) | 3483 |
| VpaK11BI | GGWCC | 6 cut(s) | 94, 760, 1008, 1414, 2147, 3282 |
| VspI | ATTAAT | 1 cut(s) | 2505 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 3519, 3800 |
| XapI | RAATTY | 6 cut(s) | 703, 991, 1677, 1862, 3525, 3862 |
| XbaI | TCTAGA | 1 cut(s) | 3529 |
| XceI | RCATGY | 7 cut(s) | 2043, 3016, 3263, 4082, 4088, 4649, 4683 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4399 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1677, 2220, 2385, 2409, 3408 |
| XspI | CTAG | 7 cut(s) | 65, 957, 1527, 2154, 2777, 3530, 4966 |
| Zsp2I | ATGCAT | 4 cut(s) | 1996, 3018, 3261, 4147 |