Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007564

Physical Location & Seq

Genomic Coordinates Forward (+)

18249663 .. 18253911

Gene Structure 4249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G49220.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGGATACGAAAGGCTCGGACCATCCGGAGCAACTGGTTCGGTCACCACCTCCACTACTACAGCTCCAATCCTTAACCAAGTCTCCACGTCAGAGCAACCGGAGAACAACAACCGAAGAAGCAAAAAGAAGCTTGTCGTATCATCAATCGTCTTAGCCATCTCACTTATCCTCGCCGCCGCGATCTTCGCCGGAGTCAGATCACGTCTCAAGTTAAACCAATCAGTCCCAGGCCTAGCTCGTAAACCGAGTCAAGCAATCTCTAAAGCTTGTGAGTTAACTCGTTTCCCCGAGTTATGCGTTGACTCACTCATGGACTTTCCCGGCTCACTCGCCGCTTCCTCCTCTAAAGATCTCATCCACGTGACTGTGAACATGACGCTCCACCACTTCAGCCACGCTCTCTACTCCTCTGCTTCCCTCTCCTTCGTCGACATGCCGCCACGTGCTCGCTCAGCTTACGACTCTTGCGTCGAGCTACTTGACGATTCCGTTGACGCGCTATCACGCGCTCTTTCCTCCGTCGTATCCTCCTCCGCTAAGCCGCAAGATGTTACAACGTGGCTTAGCGCGGCTTTAACAAACCATGACACGTGTACTGAAGGATTCGACGGCGTCGACGACGGTGGAGTGAAGGATCATATGACGGCGGCGTTACAGAATCTTTCTGAGCTTGTTAGTAACTGTCTTGCTATATTCTCGGCGAGTCACGACGGTGACGATTTCGCCGGAGTTCCAATACAGAACAGGAGGCTGCTGGGAGTGGAGGAACGAGAAGAGAAATTCCCGAGATGGATGAGACCAAAAGAACGCGAGATACTGGAAATGCCGGTATCTCAGATACAAGCTGATATTATCGTATCGAAAGACGGTAACGGCACGTGCAAAACTATATCGGAAGCTATCAAGAAAGCTCCTCAGAACAGTACTCGCCGGATAATTATCTACGTCAAGGCCGGAAGATATGAAGAGAACAACCTCAAGGTCGGTAGGAAAAAAATTAATTTGATGTTCGTTGGAGATGGCAAGGGTAAAACTGTTATTTCGGGAGGCAAAAGTATATTTGACAACATCACTACTTTCCACACGGCGTCATTTGCTGCGACCGGAGCTGGATTTATTGCAAGGGACATCACATTCGAAAACTGGGCCGGTCCAGCGAAGCACCAAGCCGTGGCTCTCCGCATCGGAGCTGACCACGCAGTGATCTACCGATGCAATATAATCGGTTACCAAGACACACTCTACGTCCATTCAAACCGCCAATTCTTTCGTGAATGCGATATCTACGGTACAGTCGATTTTATCTTTGGTAACGCAGCCGTCGTACTACAAAACTGTAGCATCTACGCACGGAAGCCAATGGATTTTCAGAAAAATACAATCACGGCTCAAAACAGAAAAGATCCGAACCAAAACACCGGAATATCAATACATGCGTCTAGGGTTCTTGCAGCATCCGATCTCCAAGCGACAAACGGTAGTACACAGACGTATCTAGGCCGACCTTGGAAGCTATTCTCTAGGACAGTGTATATGATGTCGTATATCGGTGGTCATGTACACACGAGAGGTTGGCTCGAGTGGAACACAACATTTGCTTTAGATACTTTGTATTATGGAGAGTATTTGAACAGTGGACCTGGGTCGGGTCTCGGGCAACGTGTGAGCTGGCCGGGTTATCGGGTCATCAATTCGACGGCCGAGGCAAACCGGTTCACTGTGGCAGAATTTATATACGGTTCCTCGTGGTTGCCATCGACCGGAGTTTCGTTCTTGGCCGGATTAAGCATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0008150 GO:0009505 GO:0010119 GO:0016020 GO:0016787 GO:0016788 GO:0030234 GO:0030312 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050789 GO:0050790 GO:0050794 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

598

Amino Acids

65.31

Weight (kDa)

8.79

Isoelectric Point (pI)

34.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	131 - 277	3.6e-34	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	329 - 626	2.2e-143	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49220 AT3G49220 AT3G49220 AT5G53370 AT5G53370
fragaria_vesca	FvH4_7g31650 FvH4_7g31650 FvH4_7g31650 FvH4_7g31650 FvH4_7g31650
malus_domestica	MD01G1220700.v1.1 MD07G1289200.v1.1
prunus_persica	Prupe.2G310600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0380731
rosa_laevigata	RLG00000026273
rosa_multiflora	Rmu_sc0001637.1_g000012
rosa_roxburghii	Rroxscaffold_4G00279070
rosa_rugosa	Rorug01G0424000
rosa_samantha	Rh1AG448200 Rh1BG403600 Rh1CG417900 Rh1DG433900
rosa_wichuraiana	Rw0G005890 Rw1G039010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	470
AccB7I	CCANNNNNTGG	1 cut(s)	1174
AccI	GTMKAC	2 cut(s)	432, 618
AccII	CGCG	5 cut(s)	182, 500, 510, 572, 813
AccIII	TCCGGA	1 cut(s)	26
AclWI	GGATC	2 cut(s)	645, 1400
AcoI	YGGCCR	3 cut(s)	1673, 1701, 1779
AcsI	RAATTY	2 cut(s)	782, 1730
AcuI	CTGAAG	2 cut(s)	376, 621
AcvI	CACGTG	4 cut(s)	364, 446, 594, 882
AcyI	GRCGYC	2 cut(s)	615, 1091
AdeI	CACNNNGTG	1 cut(s)	1204
AfaI	GTAC	6 cut(s)	598, 928, 1294, 1329, 1486, 1563
AfiI	CCNNNNNNNGG	3 cut(s)	1174, 1649, 1763
AflIII	ACRYGT	3 cut(s)	591, 593, 1663
AgeI	ACCGGT	1 cut(s)	1713
AgsI	TTSAA	2 cut(s)	1257, 1633
AjiI	CACGTC	2 cut(s)	90, 206
AjnI	CCWGG	2 cut(s)	229, 1642
AleI	CACNNNNGTG	1 cut(s)	714
Alw21I	GWGCWC	1 cut(s)	451
Alw26I	GTCTC	4 cut(s)	88, 212, 793, 1658
AlwI	GGATC	2 cut(s)	645, 1400
Ama87I	CYCGRG	4 cut(s)	290, 787, 1580, 1655
Aor13HI	TCCGGA	1 cut(s)	26
AoxI	GGCC	7 cut(s)	232, 954, 1149, 1501, 1673, 1701, 1779
ApeKI	GCWGC	4 cut(s)	754, 1100, 1319, 1454
ApoI	RAATTY	2 cut(s)	782, 1730
ArsI	GACNNNNNNTTYG	4 cut(s)	1121, 1153, 1753, 1785
AseI	ATTAAT	1 cut(s)	1002
AsiGI	ACCGGT	1 cut(s)	1713
Asp700I	GAANNNNTTC	1 cut(s)	1517
AspLEI	GCGC	3 cut(s)	502, 512, 572
AspS9I	GGNCC	4 cut(s)	20, 1149, 1154, 1640
AsuC2I	CCSGG	2 cut(s)	324, 1677
AsuHPI	GGTGA	2 cut(s)	37, 728
AsuII	TTCGAA	1 cut(s)	1140
AvaI	CYCGRG	4 cut(s)	290, 787, 1580, 1655
AvaII	GGWCC	3 cut(s)	20, 1154, 1640
BaeI	ACNNNNGTAYC	2 cut(s)	1478, 1511
BauI	CACGAG	2 cut(s)	1567, 1747
BbrPI	CACGTG	4 cut(s)	364, 446, 594, 882
Bbv12I	GWGCWC	1 cut(s)	451
BbvI	GCAGC	4 cut(s)	741, 1087, 1331, 1466
BccI	CCATC	5 cut(s)	31, 167, 786, 1016, 1765
BceAI	ACGGC	8 cut(s)	628, 663, 892, 1104, 1157, 1307, 1404, 1716
BcgI	CGANNNNNNTGC	4 cut(s)	21, 55, 1207, 1241
BciT130I	CCWGG	2 cut(s)	231, 1644
BciVI	GTATCC	1 cut(s)	538
BcnI	CCSGG	2 cut(s)	324, 1677
BcoDI	GTCTC	4 cut(s)	88, 212, 793, 1658
BfaI	CTAG	4 cut(s)	236, 1443, 1499, 1524
BfmI	CTRYAG	2 cut(s)	60, 1339
BfuI	GTATCC	1 cut(s)	538
BglII	AGATCT	1 cut(s)	352
BlpI	GCTNAGC	3 cut(s)	454, 540, 566
BmcAI	AGTACT	1 cut(s)	928
Bme1390I	CCNGG	4 cut(s)	231, 324, 1644, 1677
Bme18I	GGWCC	3 cut(s)	20, 1154, 1640
BmeT110I	CYCGRG	4 cut(s)	290, 787, 1580, 1655
BmgBI	CACGTC	2 cut(s)	90, 206
BmgT120I	GGNCC	4 cut(s)	20, 1149, 1154, 1640
BmiI	GGNNCC	1 cut(s)	1744
BmrFI	CCNGG	4 cut(s)	231, 324, 1644, 1677
BmrI	ACTGGG	1 cut(s)	1156
BmsI	GCATC	4 cut(s)	1194, 1205, 1353, 1466
BmuI	ACTGGG	1 cut(s)	1156
BoxI	GACNNNNGTC	1 cut(s)	1645
BplI	GAGNNNNNCTC	2 cut(s)	1563, 1595
Bpu1102I	GCTNAGC	3 cut(s)	454, 540, 566
Bpu14I	TTCGAA	1 cut(s)	1140
BpuEI	CTTGAG	2 cut(s)	194, 965
BpuMI	CCSGG	2 cut(s)	324, 1677
BsaAI	YACGTR	4 cut(s)	364, 446, 594, 882
BsaBI	GATNNNNATC	1 cut(s)	941
BsaHI	GRCGYC	2 cut(s)	615, 1091
BsaI	GGTCTC	2 cut(s)	793, 1658
BsaJI	CCNNGG	5 cut(s)	229, 1173, 1508, 1643, 1704
BsaWI	WCCGGW	6 cut(s)	26, 100, 1106, 1421, 1713, 1763
BsaXI	ACNNNNNCTCC	4 cut(s)	49, 68, 79, 98
Bsc4I	CCNNNNNNNGG	3 cut(s)	1174, 1649, 1763
Bse118I	RCCGGY	3 cut(s)	829, 1151, 1713
Bse1I	ACTGG	3 cut(s)	40, 825, 1151
Bse8I	GATNNNNATC	1 cut(s)	941
BseAI	TCCGGA	1 cut(s)	26
BseBI	CCWGG	2 cut(s)	231, 1644
BseDI	CCNNGG	5 cut(s)	229, 1173, 1508, 1643, 1704
BseGI	GGATG	4 cut(s)	23, 357, 801, 1457
BseJI	GATNNNNATC	1 cut(s)	941
BseLI	CCNNNNNNNGG	3 cut(s)	1174, 1649, 1763
BseMII	CTCAG	4 cut(s)	468, 660, 851, 932
BseNI	ACTGG	3 cut(s)	40, 825, 1151
BseRI	GAGGAG	4 cut(s)	334, 400, 523, 906
BseX3I	CGGCCG	1 cut(s)	1701
BseXI	GCAGC	4 cut(s)	741, 1087, 1331, 1466
BseYI	CCCAGC	1 cut(s)	757
Bsh1236I	CGCG	5 cut(s)	182, 500, 510, 572, 813
Bsh1285I	CGRYCG	3 cut(s)	1107, 1704, 1764
BshFI	GGCC	7 cut(s)	234, 956, 1151, 1503, 1675, 1703, 1781
BshTI	ACCGGT	1 cut(s)	1713
BsiEI	CGRYCG	3 cut(s)	1107, 1704, 1764
BsiHKAI	GWGCWC	1 cut(s)	451
BsiHKCI	CYCGRG	4 cut(s)	290, 787, 1580, 1655
BslFI	GGGAC	2 cut(s)	212, 1142
BslI	CCNNNNNNNGG	3 cut(s)	1174, 1649, 1763
BsmAI	GTCTC	4 cut(s)	88, 212, 793, 1658
BsmBI	CGTCTC	1 cut(s)	212
BsmFI	GGGAC	2 cut(s)	212, 1142
BsmI	GAATGC	1 cut(s)	1283
BsnI	GGCC	7 cut(s)	234, 956, 1151, 1503, 1675, 1703, 1781
Bso31I	GGTCTC	2 cut(s)	793, 1658
BsoBI	CYCGRG	4 cut(s)	290, 787, 1580, 1655
Bsp119I	TTCGAA	1 cut(s)	1140
Bsp1286I	GDGCHC	1 cut(s)	451
Bsp13I	TCCGGA	1 cut(s)	26
Bsp1407I	TGTACA	1 cut(s)	1561
Bsp143I	GATC	7 cut(s)	183, 200, 352, 637, 1206, 1405, 1462
Bsp1720I	GCTNAGC	3 cut(s)	454, 540, 566
BspANI	GGCC	7 cut(s)	234, 956, 1151, 1503, 1675, 1703, 1781
BspCNI	CTCAG	4 cut(s)	467, 661, 850, 931
BspEI	TCCGGA	1 cut(s)	26
BspFNI	CGCG	5 cut(s)	182, 500, 510, 572, 813
BspLI	GGNNCC	1 cut(s)	1744
BspPI	GGATC	2 cut(s)	645, 1400
BspT104I	TTCGAA	1 cut(s)	1140
BspTNI	GGTCTC	2 cut(s)	793, 1658
BsrFI	RCCGGY	3 cut(s)	829, 1151, 1713
BsrGI	TGTACA	1 cut(s)	1561
BsrI	ACTGG	3 cut(s)	40, 825, 1151
BssAI	RCCGGY	3 cut(s)	829, 1151, 1713
BssECI	CCNNGG	5 cut(s)	229, 1173, 1508, 1643, 1704
BssMI	GATC	7 cut(s)	183, 200, 352, 637, 1206, 1405, 1462
BssNI	GRCGYC	2 cut(s)	615, 1091
BssSI	CACGAG	2 cut(s)	1567, 1747
BssT1I	CCWWGG	1 cut(s)	1508
Bst2BI	CACGAG	2 cut(s)	1567, 1747
Bst2UI	CCWGG	2 cut(s)	231, 1644
Bst6I	CTCTTC	2 cut(s)	771, 963
BstACI	GRCGYC	2 cut(s)	615, 1091
BstAUI	TGTACA	1 cut(s)	1561
BstBAI	YACGTR	4 cut(s)	364, 446, 594, 882
BstBI	TTCGAA	1 cut(s)	1140
BstC8I	GCNNGC	2 cut(s)	451, 1673
BstDEI	CTNAG	7 cut(s)	154, 454, 540, 566, 669, 837, 918
BstDSI	CCRYGG	1 cut(s)	1173
BstEII	GGTNACC	2 cut(s)	43, 1229
BstF5I	GGATG	4 cut(s)	23, 357, 801, 1457
BstFNI	CGCG	5 cut(s)	182, 500, 510, 572, 813
BstHHI	GCGC	3 cut(s)	502, 512, 572
BstKTI	GATC	7 cut(s)	186, 203, 355, 640, 1209, 1408, 1465
BstMAI	GTCTC	4 cut(s)	88, 212, 793, 1658
BstMBI	GATC	7 cut(s)	183, 200, 352, 637, 1206, 1405, 1462
BstMCI	CGRYCG	3 cut(s)	1107, 1704, 1764
BstMWI	GCNNNNNNNGC	6 cut(s)	188, 455, 1097, 1109, 1157, 1199
BstNI	CCWGG	2 cut(s)	231, 1644
BstNSI	RCATGY	2 cut(s)	439, 1439
BstPAI	GACNNNNGTC	1 cut(s)	1645
BstPI	GGTNACC	2 cut(s)	43, 1229
BstSCI	CCNGG	4 cut(s)	229, 322, 1642, 1675
BstSFI	CTRYAG	2 cut(s)	60, 1339
BstUI	CGCG	5 cut(s)	182, 500, 510, 572, 813
BstV1I	GCAGC	4 cut(s)	741, 1087, 1331, 1466
BstX2I	RGATCY	2 cut(s)	352, 1405
BstYI	RGATCY	2 cut(s)	352, 1405
BstZI	CGGCCG	1 cut(s)	1701
BsuI	GTATCC	1 cut(s)	538
BsuRI	GGCC	7 cut(s)	234, 956, 1151, 1503, 1675, 1703, 1781
BtgI	CCRYGG	1 cut(s)	1173
BtrI	CACGTC	2 cut(s)	90, 206
BtsCI	GGATG	4 cut(s)	23, 357, 801, 1457
BtsI	GCAGTG	1 cut(s)	1209
BtsIMutI	CAGTG	4 cut(s)	1209, 1536, 1642, 1719
Cac8I	GCNNGC	2 cut(s)	451, 1673
CfoI	GCGC	3 cut(s)	502, 512, 572
Cfr10I	RCCGGY	3 cut(s)	829, 1151, 1713
Cfr13I	GGNCC	4 cut(s)	20, 1149, 1154, 1640
CseI	GACGC	6 cut(s)	388, 460, 506, 604, 1080, 1428
Csp6I	GTAC	6 cut(s)	597, 927, 1293, 1328, 1485, 1562
CspAI	ACCGGT	1 cut(s)	1713
CviAII	CATG	6 cut(s)	313, 376, 436, 587, 1436, 1559
CviQI	GTAC	6 cut(s)	597, 927, 1293, 1328, 1485, 1562
DdeI	CTNAG	7 cut(s)	154, 454, 540, 566, 669, 837, 918
DpnI	GATC	7 cut(s)	185, 202, 354, 639, 1208, 1407, 1464
DpnII	GATC	7 cut(s)	183, 200, 352, 637, 1206, 1405, 1462
DraIII	CACNNNGTG	1 cut(s)	1204
DrdI	GACNNNNNNGTC	1 cut(s)	470
DseDI	GACNNNNNNGTC	1 cut(s)	470
EaeI	YGGCCR	3 cut(s)	1673, 1701, 1779
EagI	CGGCCG	1 cut(s)	1701
Eam1104I	CTCTTC	2 cut(s)	771, 963
EarI	CTCTTC	2 cut(s)	771, 963
EclXI	CGGCCG	1 cut(s)	1701
Eco130I	CCWWGG	1 cut(s)	1508
Eco147I	AGGCCT	1 cut(s)	234
Eco31I	GGTCTC	2 cut(s)	793, 1658
Eco32I	GATATC	1 cut(s)	1285
Eco47I	GGWCC	3 cut(s)	20, 1154, 1640
Eco52I	CGGCCG	1 cut(s)	1701
Eco57I	CTGAAG	2 cut(s)	376, 621
Eco72I	CACGTG	4 cut(s)	364, 446, 594, 882
Eco88I	CYCGRG	4 cut(s)	290, 787, 1580, 1655
Eco91I	GGTNACC	2 cut(s)	43, 1229
EcoO65I	GGTNACC	2 cut(s)	43, 1229
EcoRII	CCWGG	2 cut(s)	229, 1642
EcoRV	GATATC	1 cut(s)	1285
EcoT14I	CCWWGG	1 cut(s)	1508
ErhI	CCWWGG	1 cut(s)	1508
Esp3I	CGTCTC	1 cut(s)	212
FaeI	CATG	6 cut(s)	316, 379, 439, 590, 1439, 1562
FaqI	GGGAC	2 cut(s)	212, 1142
FatI	CATG	6 cut(s)	312, 375, 435, 586, 1435, 1558
FauNDI	CATATG	1 cut(s)	642
FblI	GTMKAC	2 cut(s)	432, 618
FokI	GGATG	4 cut(s)	10, 344, 808, 1444
FspBI	CTAG	4 cut(s)	236, 1443, 1499, 1524
GlaI	GCGC	3 cut(s)	501, 511, 571
GsaI	CCCAGC	1 cut(s)	761
HaeIII	GGCC	7 cut(s)	234, 956, 1151, 1503, 1675, 1703, 1781
HgaI	GACGC	6 cut(s)	388, 460, 506, 604, 1080, 1428
HhaI	GCGC	3 cut(s)	502, 512, 572
Hin1I	GRCGYC	2 cut(s)	615, 1091
Hin1II	CATG	6 cut(s)	316, 379, 439, 590, 1439, 1562
Hin6I	GCGC	3 cut(s)	500, 510, 570
HinP1I	GCGC	3 cut(s)	500, 510, 570
HincII	GTYRAC	5 cut(s)	279, 304, 433, 496, 619
HindII	GTYRAC	5 cut(s)	279, 304, 433, 496, 619
HindIII	AAGCTT	2 cut(s)	131, 267
HinfI	GANTC	8 cut(s)	195, 250, 305, 464, 488, 606, 661, 706
HpaI	GTTAAC	1 cut(s)	279
HphI	GGTGA	2 cut(s)	37, 728
Hpy188III	TCNNGA	6 cut(s)	27, 710, 787, 907, 1047, 1274
HpyAV	CCTTC	3 cut(s)	436, 596, 628
HpyCH4V	TGCA	4 cut(s)	885, 1124, 1218, 1454
HpyF10VI	GCNNNNNNNGC	6 cut(s)	188, 455, 1097, 1109, 1157, 1199
HpyF3I	CTNAG	7 cut(s)	154, 454, 540, 566, 669, 837, 918
Hsp92I	GRCGYC	2 cut(s)	615, 1091
Hsp92II	CATG	6 cut(s)	316, 379, 439, 590, 1439, 1562
HspAI	GCGC	3 cut(s)	500, 510, 570
Kpn2I	TCCGGA	1 cut(s)	26
KspAI	GTTAAC	1 cut(s)	279
Kzo9I	GATC	7 cut(s)	183, 200, 352, 637, 1206, 1405, 1462
LmnI	GCTCC	6 cut(s)	29, 70, 387, 919, 1109, 1190
Lsp1109I	GCAGC	4 cut(s)	741, 1087, 1331, 1466
LweI	GCATC	4 cut(s)	1194, 1205, 1353, 1466
MaeI	CTAG	4 cut(s)	236, 1443, 1499, 1524
MalI	GATC	7 cut(s)	185, 202, 354, 639, 1208, 1407, 1464
MboI	GATC	7 cut(s)	183, 200, 352, 637, 1206, 1405, 1462
MboII	GAAGA	5 cut(s)	129, 178, 788, 972, 980
MflI	RGATCY	2 cut(s)	352, 1405
MhlI	GDGCHC	1 cut(s)	451
MluCI	AATT	7 cut(s)	782, 939, 999, 1003, 1265, 1693, 1730
MlyI	GAGTC	5 cut(s)	204, 259, 299, 458, 715
MmeI	TCCRAC	1 cut(s)	997
MroI	TCCGGA	1 cut(s)	26
MroXI	GAANNNNTTC	1 cut(s)	1517
MseI	TTAA	6 cut(s)	75, 215, 278, 578, 1002, 1787
MslI	CAYNNNNRTG	2 cut(s)	362, 714
MspR9I	CCNGG	4 cut(s)	231, 324, 1644, 1677
Mva1269I	GAATGC	1 cut(s)	1283
MvaI	CCWGG	2 cut(s)	231, 1644
MvnI	CGCG	5 cut(s)	182, 500, 510, 572, 813
MwoI	GCNNNNNNNGC	6 cut(s)	188, 455, 1097, 1109, 1157, 1199
NciI	CCSGG	2 cut(s)	324, 1677
NdeI	CATATG	1 cut(s)	642
NdeII	GATC	7 cut(s)	183, 200, 352, 637, 1206, 1405, 1462
NlaIII	CATG	6 cut(s)	316, 379, 439, 590, 1439, 1562
NlaIV	GGNNCC	1 cut(s)	1744
NmeAIII	GCCGAG	2 cut(s)	680, 1729
NmuCI	GTSAC	4 cut(s)	43, 364, 707, 716
NspI	RCATGY	2 cut(s)	439, 1439
NspV	TTCGAA	1 cut(s)	1140
OliI	CACNNNNGTG	1 cut(s)	714
PaeR7I	CTCGAG	1 cut(s)	1580
PceI	AGGCCT	1 cut(s)	234
PcsI	WCGNNNNNNNCGW	6 cut(s)	468, 615, 618, 717, 1296, 1323
PctI	GAATGC	1 cut(s)	1283
PdmI	GAANNNNTTC	1 cut(s)	1517
PfeI	GAWTC	3 cut(s)	488, 606, 661
PflFI	GACNNNGTC	1 cut(s)	614
PflMI	CCANNNNNTGG	1 cut(s)	1174
PinAI	ACCGGT	1 cut(s)	1713
PleI	GAGTC	5 cut(s)	203, 258, 299, 458, 714
PmaCI	CACGTG	4 cut(s)	364, 446, 594, 882
PmlI	CACGTG	4 cut(s)	364, 446, 594, 882
PpsI	GAGTC	5 cut(s)	203, 258, 299, 458, 714
Ppu21I	YACGTR	4 cut(s)	364, 446, 594, 882
PshAI	GACNNNNGTC	1 cut(s)	1645
PshBI	ATTAAT	1 cut(s)	1002
Psp6I	CCWGG	2 cut(s)	229, 1642
PspCI	CACGTG	4 cut(s)	364, 446, 594, 882
PspEI	GGTNACC	2 cut(s)	43, 1229
PspFI	CCCAGC	1 cut(s)	757
PspGI	CCWGG	2 cut(s)	229, 1642
PspN4I	GGNNCC	1 cut(s)	1744
PspPI	GGNCC	4 cut(s)	20, 1149, 1154, 1640
PspXI	VCTCGAGB	1 cut(s)	1580
PsrI	GAACNNNNNNTAC	2 cut(s)	801, 833
PsuI	RGATCY	2 cut(s)	352, 1405
PsyI	GACNNNGTC	1 cut(s)	614
RsaI	GTAC	6 cut(s)	598, 928, 1294, 1329, 1486, 1563
RsaNI	GTAC	6 cut(s)	597, 927, 1293, 1328, 1485, 1562
RseI	CAYNNNNRTG	2 cut(s)	362, 714
SalI	GTCGAC	2 cut(s)	431, 617
SaqAI	TTAA	6 cut(s)	75, 215, 278, 578, 1002, 1787
Sau3AI	GATC	7 cut(s)	183, 200, 352, 637, 1206, 1405, 1462
Sau96I	GGNCC	4 cut(s)	20, 1149, 1154, 1640
ScaI	AGTACT	1 cut(s)	928
SchI	GAGTC	5 cut(s)	204, 259, 299, 458, 715
ScrFI	CCNGG	4 cut(s)	231, 324, 1644, 1677
SduI	GDGCHC	1 cut(s)	451
SfaNI	GCATC	4 cut(s)	1194, 1205, 1353, 1466
SfcI	CTRYAG	2 cut(s)	60, 1339
Sfr274I	CTCGAG	1 cut(s)	1580
SfuI	TTCGAA	1 cut(s)	1140
SgrDI	CGTCGACG	1 cut(s)	617
SinI	GGWCC	3 cut(s)	20, 1154, 1640
SlaI	CTCGAG	1 cut(s)	1580
SmiMI	CAYNNNNRTG	2 cut(s)	362, 714
SmlI	CTYRAG	3 cut(s)	209, 980, 1580
SmoI	CTYRAG	3 cut(s)	209, 980, 1580
Sse9I	AATT	7 cut(s)	782, 939, 999, 1003, 1265, 1693, 1730
SseBI	AGGCCT	1 cut(s)	234
SspMI	CTAG	4 cut(s)	236, 1443, 1499, 1524
StuI	AGGCCT	1 cut(s)	234
StyD4I	CCNGG	4 cut(s)	229, 322, 1642, 1675
StyI	CCWWGG	1 cut(s)	1508
TaqII	GACCGA	1 cut(s)	31
TasI	AATT	7 cut(s)	782, 939, 999, 1003, 1265, 1693, 1730
TatI	WGTACW	4 cut(s)	596, 926, 1484, 1561
TauI	GCSGC	7 cut(s)	179, 182, 338, 442, 547, 575, 653
TfiI	GAWTC	3 cut(s)	488, 606, 661
Tru1I	TTAA	6 cut(s)	75, 215, 278, 578, 1002, 1787
Tru9I	TTAA	6 cut(s)	75, 215, 278, 578, 1002, 1787
TscAI	CASTG	4 cut(s)	1209, 1536, 1642, 1726
TseFI	GTSAC	4 cut(s)	43, 364, 707, 716
TseI	GCWGC	4 cut(s)	754, 1100, 1319, 1454
Tsp45I	GTSAC	4 cut(s)	43, 364, 707, 716
TspDTI	ATGAA	1 cut(s)	981
TspGWI	ACGGA	3 cut(s)	481, 511, 1369
TspRI	CASTG	4 cut(s)	1209, 1536, 1642, 1726
Tth111I	GACNNNGTC	1 cut(s)	614
Van91I	CCANNNNNTGG	1 cut(s)	1174
VpaK11BI	GGWCC	3 cut(s)	20, 1154, 1640
VspI	ATTAAT	1 cut(s)	1002
XapI	RAATTY	2 cut(s)	782, 1730
XceI	RCATGY	2 cut(s)	439, 1439
XhoI	CTCGAG	1 cut(s)	1580
XmiI	GTMKAC	2 cut(s)	432, 618
XmnI	GAANNNNTTC	1 cut(s)	1517
XspI	CTAG	4 cut(s)	236, 1443, 1499, 1524
ZrmI	AGTACT	1 cut(s)	928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.