Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0007564

Physical Location & Seq

Genomic Coordinates Forward (+)

1818768 .. 1821831

Gene Structure 3064 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026273

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGGGATACGGCCGTCTCCAACCCTCCGACCCCGGAGGCTCCTCCCGCTCCTTGGGCGACCAATCCCAGCCGCAACAACCACCGTCTCGTAAAAGCAAGAAAAAGCTCATCATACTCTCCATTCTCTCCATCACTCTCATCGCCGCCGCCGCCGTCTCAGCCGTCCTCCTCATCGCAGTCCGATCCAAGCCGGCGGCGAAGCAGTCCCTCCTCCACCGCCAGCCGACGCAAGCCATCTCTGACGCCTGCTCCAAGACTCGCTTCCCTTCTCTCTGCGTCAACTCCCTCCTCGACTTCCCGGGATCTCTGAACGCGTCGGAGGCCGACCTCGTCCACATTTCCTTCAACATGACGCTGCAGCACCTCAGCAAAGCCCTCTACCTCTCCTCGGGGCTATCGTATCTCCAGATGGACCCACACGCCAAGTCCGCCTACCAGGACTGCCTCGAGCTCCTGGACGACTCTGTGGACGCGCTCACGCGCGCCCTGACTACCGTCGCGCCTGGACTCGACGGTAGCCCCGGGTCTAGCCAGGACGTGCAGACCTGGCTGAGCTCGGCGCTGACAAATCAGGACACCTGCGGGGAGGGCCTCGCCGACGTGAGCGGCCCGGTGAAAGAGGAGCTGGGCCAGAAGCTGAAGGACTTGTCGGAGCTGGTGAGTAACTGCCTGGCGATATTTACAGCGACTAGTAGTAACGACTTCTCGGGAGTGCCGATTCAGAACAGGAGATTGCTGATGGAGAGTGATATAATGGGAGGAGATAATGCCGCCGATGTGTCCCGGGATTTCCCGAGATGGTTGGGTAAGAAGGAGAGGATGTTGCTGGCCTTGCCGGTGGCACAGATACAGGCCGATATAATCGTCTCCAAGGACGGAAATGGGACCTTCAAGACGATCGCCGAGGCGATCAAAAAGGCGCCGGAGTATAGTAAACGCCGGACAGTTATTTACGTCAGGGCAGGAAGGTACGAAGAAGATAATCTGAAGGTAGGAAGGAAGAAAACGAACTTGATGTTCATCGGCGACGGCAAGGGTATAACCATAATCACCGGTGGTAAAAGCGTTTCCGAAAAGCTAACCACATTCCGCACCGCATCCTTTGCGGCTACCGGAGCAGGCTTCATAGCACGGGACATAACGTTTGAGAACTATGCCGGCCCGCAGAAGCACCAAGCCGTTGCCCTCCGCGTTGGGGCAGATCATGCCGTGGTCTACCGGTGCAACATTATCGGATATCAAGACACGTTTTATGTGCACTCGAACCGACAGTTTGTTCGTGAATGTGACATTTATGGTACTGTGGACTTCATATTTGGCAATGCGGCCGTGGTATTTCAAAATTGTAGTATCTACGCCCGCAAGCCAATGCCCTCTCAGAAAAACACCATCACGGCTCAAAACAGGAAAGACCCGAATCAAAACACGGGGATGTCGATCCACGCTTGCCGGATCCTTGCCGCGTCGGATCTTGCCCCCGTAAAGGGTAGCTTTCCGACGTATTTGGGTCGCCCTTGGAAAATGTACTCTAGGGTTGTGTACATGTTATCATACATTGGGGATCATGTAGCTCCCCGAGGATGGCTCGAGTGGAATTCCAATTTTGCCCTAGATACTCTCTACTACGGTGAATACATGAACTATGGGCCGGGCGGGGCTGTAGGTCAACGTGTAAAATGGCCAGGGTATCGGGTCATTACGTCCACTGTTGAGGCCAACAAGTTCACCGTTGCACAGTTTATATATGGCTCATCATGGTTACCCTCCACTGGAGTGGCATTCTTGGGTGGCCTTTCGGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0008150 GO:0009505 GO:0010119 GO:0016020 GO:0016787 GO:0016788 GO:0030234 GO:0030312 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050789 GO:0050790 GO:0050794 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

601

Amino Acids

65.33

Weight (kDa)

9.14

Isoelectric Point (pI)

40.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	78 - 226	4.8e-36	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	286 - 583	2.8e-144	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49220 AT3G49220 AT3G49220 AT5G53370 AT5G53370
fragaria_vesca	FvH4_7g31650 FvH4_7g31650 FvH4_7g31650 FvH4_7g31650 FvH4_7g31650
malus_domestica	MD01G1220700.v1.1 MD07G1289200.v1.1
prunus_persica	Prupe.2G310600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0380731
rosa_laevigata	RLG00000026273
rosa_multiflora	Rmu_sc0001637.1_g000012
rosa_roxburghii	Rroxscaffold_4G00279070
rosa_rugosa	Rorug01G0424000
rosa_samantha	Rh1AG448200 Rh1BG403600 Rh1CG417900 Rh1DG433900
rosa_wichuraiana	Rw0G005890 Rw1G039010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	587
Acc36I	ACCTGC	1 cut(s)	587
AccB1I	GGYRCC	1 cut(s)	919
AccBSI	CCGCTC	2 cut(s)	48, 606
AccI	GTMKAC	1 cut(s)	1215
AccII	CGCG	7 cut(s)	314, 473, 481, 483, 500, 1191, 1463
AclI	AACGTT	1 cut(s)	1142
AclWI	GGATC	7 cut(s)	177, 310, 1432, 1447, 1460, 1476, 1569
AcoI	YGGCCR	3 cut(s)	10, 1326, 1679
AcsI	RAATTY	1 cut(s)	1594
AcuI	CTGAAG	2 cut(s)	659, 1007
AcyI	GRCGYC	2 cut(s)	243, 920
AfaI	GTAC	4 cut(s)	971, 1300, 1526, 1541
AfiI	CCNNNNNNNGG	7 cut(s)	52, 388, 1195, 1483, 1484, 1581, 1769
AflIII	ACRYGT	4 cut(s)	312, 1245, 1542, 1669
AgeI	ACCGGT	2 cut(s)	1052, 1218
AgsI	TTSAA	3 cut(s)	346, 892, 1340
AhlI	ACTAGT	1 cut(s)	689
AjiI	CACGTC	2 cut(s)	538, 601
AjnI	CCWGG	7 cut(s)	435, 453, 502, 531, 545, 669, 1681
AjuI	GAANNNNNNNTTGG	2 cut(s)	245, 277
AleI	CACNNNNGTG	1 cut(s)	1772
AluBI	AGCT	9 cut(s)	106, 451, 555, 625, 637, 655, 1078, 1491, 1571
AluI	AGCT	9 cut(s)	106, 451, 555, 625, 637, 655, 1078, 1491, 1571
Alw21I	GWGCWC	3 cut(s)	453, 557, 1260
Alw26I	GTCTC	4 cut(s)	20, 90, 160, 871
Alw44I	GTGCAC	1 cut(s)	1256
AlwI	GGATC	7 cut(s)	177, 310, 1432, 1447, 1460, 1476, 1569
AlwNI	CAGNNNCTG	1 cut(s)	637
Ama87I	CYCGRG	9 cut(s)	298, 388, 446, 521, 706, 783, 793, 1575, 1586
ApaLI	GTGCAC	1 cut(s)	1256
ApeKI	GCWGC	2 cut(s)	355, 358
ApoI	RAATTY	1 cut(s)	1594
ArsI	GACNNNNNNTTYG	6 cut(s)	1127, 1159, 1260, 1292, 1298, 1330
AsiGI	ACCGGT	2 cut(s)	1052, 1218
AspLEI	GCGC	6 cut(s)	475, 483, 485, 502, 562, 922
AspS9I	GGNCC	7 cut(s)	412, 589, 608, 628, 885, 1160, 1646
AsuC2I	CCSGG	9 cut(s)	33, 299, 300, 522, 523, 611, 784, 785, 1650
AsuHPI	GGTGA	5 cut(s)	625, 670, 1042, 1640, 1717
AvaI	CYCGRG	9 cut(s)	298, 388, 446, 521, 706, 783, 793, 1575, 1586
AvaII	GGWCC	2 cut(s)	412, 885
BaeGI	GKGCMC	1 cut(s)	1260
BaeI	ACNNNNGTAYC	1 cut(s)	31
BalI	TGGCCA	1 cut(s)	1681
BamHI	GGATCC	1 cut(s)	1452
BanI	GGYRCC	1 cut(s)	919
BanII	GRGCYC	2 cut(s)	453, 557
Bbv12I	GWGCWC	3 cut(s)	453, 557, 1260
BbvCI	CCTCAGC	1 cut(s)	365
BbvI	GCAGC	2 cut(s)	342, 370
BccI	CCATC	7 cut(s)	137, 242, 403, 733, 792, 1397, 1575
BceAI	ACGGC	8 cut(s)	25, 137, 146, 1045, 1163, 1193, 1313, 1410
BcgI	CGANNNNNNTGC	2 cut(s)	1213, 1247
BciT130I	CCWGG	7 cut(s)	437, 455, 504, 533, 547, 671, 1683
BcnI	CCSGG	9 cut(s)	33, 299, 300, 522, 523, 611, 784, 785, 1650
BcoDI	GTCTC	4 cut(s)	20, 90, 160, 871
BcuI	ACTAGT	1 cut(s)	689
BfaI	CTAG	4 cut(s)	528, 690, 1530, 1610
BfmI	CTRYAG	2 cut(s)	356, 1659
BfoI	RGCGCY	2 cut(s)	563, 923
BfuAI	ACCTGC	1 cut(s)	587
BlpI	GCTNAGC	1 cut(s)	551
Bme18I	GGWCC	2 cut(s)	412, 885
BmeT110I	CYCGRG	9 cut(s)	298, 388, 446, 521, 706, 783, 793, 1575, 1586
BmgBI	CACGTC	2 cut(s)	538, 601
BmgT120I	GGNCC	7 cut(s)	412, 589, 608, 628, 885, 1160, 1646
BmiI	GGNNCC	5 cut(s)	40, 414, 886, 921, 1454
BmsI	GCATC	1 cut(s)	1106
BoxI	GACNNNNGTC	1 cut(s)	494
BplI	GAGNNNNNCTC	2 cut(s)	1569, 1601
BpmI	CTGGAG	2 cut(s)	389, 1791
Bpu10I	CCTNAGC	1 cut(s)	365
Bpu1102I	GCTNAGC	1 cut(s)	551
BpuMI	CCSGG	9 cut(s)	33, 299, 300, 522, 523, 611, 784, 785, 1650
BsaBI	GATNNNNATC	2 cut(s)	1019, 1436
BsaHI	GRCGYC	2 cut(s)	243, 920
BsaWI	WCCGGW	3 cut(s)	1052, 1112, 1218
BsaXI	ACNNNNNCTCC	4 cut(s)	233, 263, 806, 836
Bsc4I	CCNNNNNNNGG	7 cut(s)	52, 388, 1195, 1483, 1484, 1581, 1769
Bse118I	RCCGGY	5 cut(s)	190, 835, 1052, 1157, 1218
Bse1I	ACTGG	1 cut(s)	1774
Bse3DI	GCAATG	1 cut(s)	1327
Bse8I	GATNNNNATC	2 cut(s)	1019, 1436
BseBI	CCWGG	7 cut(s)	437, 455, 504, 533, 547, 671, 1683
BseGI	GGATG	4 cut(s)	825, 1097, 1437, 1586
BseJI	GATNNNNATC	2 cut(s)	1019, 1436
BseLI	CCNNNNNNNGG	7 cut(s)	52, 388, 1195, 1483, 1484, 1581, 1769
BseMI	GCAATG	1 cut(s)	1327
BseMII	CTCAG	4 cut(s)	171, 379, 542, 1391
BseNI	ACTGG	1 cut(s)	1774
BsePI	GCGCGC	1 cut(s)	481
BseRI	GAGGAG	7 cut(s)	31, 158, 200, 278, 376, 635, 774
BseSI	GKGCMC	1 cut(s)	1260
BseX3I	CGGCCG	2 cut(s)	10, 1326
BseXI	GCAGC	2 cut(s)	342, 370
BseYI	CCCAGC	2 cut(s)	66, 625
BsgI	GTGCAG	1 cut(s)	560
Bsh1236I	CGCG	7 cut(s)	314, 473, 481, 483, 500, 1191, 1463
Bsh1285I	CGRYCG	3 cut(s)	13, 900, 1329
BshNI	GGYRCC	1 cut(s)	919
BshTI	ACCGGT	2 cut(s)	1052, 1218
BsiEI	CGRYCG	3 cut(s)	13, 900, 1329
BsiHKAI	GWGCWC	3 cut(s)	453, 557, 1260
BsiHKCI	CYCGRG	9 cut(s)	298, 388, 446, 521, 706, 783, 793, 1575, 1586
BslFI	GGGAC	4 cut(s)	190, 766, 898, 1148
BslI	CCNNNNNNNGG	7 cut(s)	52, 388, 1195, 1483, 1484, 1581, 1769
BsmAI	GTCTC	4 cut(s)	20, 90, 160, 871
BsmBI	CGTCTC	4 cut(s)	20, 90, 160, 871
BsmFI	GGGAC	4 cut(s)	190, 766, 898, 1148
BsmI	GAATGC	1 cut(s)	1778
BsoBI	CYCGRG	9 cut(s)	298, 388, 446, 521, 706, 783, 793, 1575, 1586
Bsp1286I	GDGCHC	3 cut(s)	453, 557, 1260
Bsp1407I	TGTACA	1 cut(s)	1539
Bsp143I	GATC	9 cut(s)	182, 302, 897, 909, 1201, 1437, 1452, 1468, 1561
Bsp1720I	GCTNAGC	1 cut(s)	551
BspCNI	CTCAG	4 cut(s)	170, 378, 543, 1390
BspFNI	CGCG	7 cut(s)	314, 473, 481, 483, 500, 1191, 1463
BspLI	GGNNCC	5 cut(s)	40, 414, 886, 921, 1454
BspMAI	CTGCAG	1 cut(s)	360
BspMI	ACCTGC	1 cut(s)	587
BspPI	GGATC	7 cut(s)	177, 310, 1432, 1447, 1460, 1476, 1569
BspT107I	GGYRCC	1 cut(s)	919
BsrBI	CCGCTC	2 cut(s)	48, 606
BsrDI	GCAATG	1 cut(s)	1327
BsrFI	RCCGGY	5 cut(s)	190, 835, 1052, 1157, 1218
BsrGI	TGTACA	1 cut(s)	1539
BsrI	ACTGG	1 cut(s)	1774
BssAI	RCCGGY	5 cut(s)	190, 835, 1052, 1157, 1218
BssHII	GCGCGC	1 cut(s)	481
BssMI	GATC	9 cut(s)	182, 302, 897, 909, 1201, 1437, 1452, 1468, 1561
BssNI	GRCGYC	2 cut(s)	243, 920
BssT1I	CCWWGG	3 cut(s)	51, 870, 1514
Bst2UI	CCWGG	7 cut(s)	437, 455, 504, 533, 547, 671, 1683
BstACI	GRCGYC	2 cut(s)	243, 920
BstAPI	GCANNNNNTGC	2 cut(s)	1103, 1205
BstAUI	TGTACA	1 cut(s)	1539
BstDEI	CTNAG	4 cut(s)	157, 365, 551, 1377
BstDSI	CCRYGG	2 cut(s)	1209, 1329
BstEII	GGTNACC	1 cut(s)	1758
BstF5I	GGATG	4 cut(s)	825, 1097, 1437, 1586
BstFNI	CGCG	7 cut(s)	314, 473, 481, 483, 500, 1191, 1463
BstH2I	RGCGCY	2 cut(s)	563, 923
BstHHI	GCGC	6 cut(s)	475, 483, 485, 502, 562, 922
BstKTI	GATC	9 cut(s)	185, 305, 900, 912, 1204, 1440, 1455, 1471, 1564
BstMAI	GTCTC	4 cut(s)	20, 90, 160, 871
BstMBI	GATC	9 cut(s)	182, 302, 897, 909, 1201, 1437, 1452, 1468, 1561
BstMCI	CGRYCG	3 cut(s)	13, 900, 1329
BstNI	CCWGG	7 cut(s)	437, 455, 504, 533, 547, 671, 1683
BstNSI	RCATGY	1 cut(s)	1546
BstPAI	GACNNNNGTC	1 cut(s)	494
BstPI	GGTNACC	1 cut(s)	1758
BstSFI	CTRYAG	2 cut(s)	356, 1659
BstSLI	GKGCMC	1 cut(s)	1260
BstUI	CGCG	7 cut(s)	314, 473, 481, 483, 500, 1191, 1463
BstV1I	GCAGC	2 cut(s)	342, 370
BstX2I	RGATCY	3 cut(s)	302, 1452, 1468
BstXI	CCANNNNNNTGG	1 cut(s)	1774
BstYI	RGATCY	3 cut(s)	302, 1452, 1468
BstZI	CGGCCG	2 cut(s)	10, 1326
BtgI	CCRYGG	2 cut(s)	1209, 1329
BtgZI	GCGATG	2 cut(s)	124, 157
BtrI	CACGTC	2 cut(s)	538, 601
BtsCI	GGATG	4 cut(s)	825, 1097, 1437, 1586
BtsIMutI	CAGTG	2 cut(s)	1704, 1767
BveI	ACCTGC	1 cut(s)	587
CaiI	CAGNNNCTG	1 cut(s)	637
CfoI	GCGC	6 cut(s)	475, 483, 485, 502, 562, 922
Cfr10I	RCCGGY	5 cut(s)	190, 835, 1052, 1157, 1218
Cfr13I	GGNCC	7 cut(s)	412, 589, 608, 628, 885, 1160, 1646
Cfr9I	CCCGGG	3 cut(s)	298, 521, 783
CseI	GACGC	7 cut(s)	235, 251, 265, 303, 361, 479, 1452
Csp6I	GTAC	4 cut(s)	970, 1299, 1525, 1540
CspAI	ACCGGT	2 cut(s)	1052, 1218
CviAII	CATG	6 cut(s)	349, 1205, 1543, 1565, 1636, 1755
CviQI	GTAC	4 cut(s)	970, 1299, 1525, 1540
DdeI	CTNAG	4 cut(s)	157, 365, 551, 1377
DinI	GGCGCC	1 cut(s)	921
DpnI	GATC	9 cut(s)	184, 304, 899, 911, 1203, 1439, 1454, 1470, 1563
DpnII	GATC	9 cut(s)	182, 302, 897, 909, 1201, 1437, 1452, 1468, 1561
EaeI	YGGCCR	3 cut(s)	10, 1326, 1679
EagI	CGGCCG	2 cut(s)	10, 1326
EciI	GGCGGA	1 cut(s)	418
Ecl136II	GAGCTC	2 cut(s)	451, 555
EclXI	CGGCCG	2 cut(s)	10, 1326
Eco130I	CCWWGG	3 cut(s)	51, 870, 1514
Eco24I	GRGCYC	2 cut(s)	453, 557
Eco32I	GATATC	1 cut(s)	1238
Eco47I	GGWCC	2 cut(s)	412, 885
Eco52I	CGGCCG	2 cut(s)	10, 1326
Eco53kI	GAGCTC	2 cut(s)	451, 555
Eco57I	CTGAAG	2 cut(s)	659, 1007
Eco88I	CYCGRG	9 cut(s)	298, 388, 446, 521, 706, 783, 793, 1575, 1586
Eco91I	GGTNACC	1 cut(s)	1758
EcoICRI	GAGCTC	2 cut(s)	451, 555
EcoO109I	RGGNCCY	2 cut(s)	589, 885
EcoO65I	GGTNACC	1 cut(s)	1758
EcoRI	GAATTC	1 cut(s)	1594
EcoRII	CCWGG	7 cut(s)	435, 453, 502, 531, 545, 669, 1681
EcoRV	GATATC	1 cut(s)	1238
EcoT14I	CCWWGG	3 cut(s)	51, 870, 1514
EcoT38I	GRGCYC	2 cut(s)	453, 557
EgeI	GGCGCC	1 cut(s)	921
EheI	GGCGCC	1 cut(s)	921
ErhI	CCWWGG	3 cut(s)	51, 870, 1514
Esp3I	CGTCTC	4 cut(s)	20, 90, 160, 871
FaeI	CATG	6 cut(s)	352, 1208, 1546, 1568, 1639, 1758
FalI	AAGNNNNNCTT	4 cut(s)	245, 277, 1475, 1507
FaqI	GGGAC	4 cut(s)	190, 766, 898, 1148
FatI	CATG	6 cut(s)	348, 1204, 1542, 1564, 1635, 1754
FauI	CCCGC	5 cut(s)	53, 575, 1170, 1367, 1646
FblI	GTMKAC	1 cut(s)	1215
FokI	GGATG	4 cut(s)	832, 1084, 1444, 1593
FriOI	GRGCYC	2 cut(s)	453, 557
FspBI	CTAG	4 cut(s)	528, 690, 1530, 1610
GlaI	GCGC	6 cut(s)	474, 482, 484, 501, 561, 921
GsaI	CCCAGC	2 cut(s)	70, 629
GsuI	CTGGAG	2 cut(s)	389, 1791
HaeII	RGCGCY	2 cut(s)	563, 923
HgaI	GACGC	7 cut(s)	235, 251, 265, 303, 361, 479, 1452
HhaI	GCGC	6 cut(s)	475, 483, 485, 502, 562, 922
Hin1I	GRCGYC	2 cut(s)	243, 920
Hin1II	CATG	6 cut(s)	352, 1208, 1546, 1568, 1639, 1758
Hin6I	GCGC	6 cut(s)	473, 481, 483, 500, 560, 920
HinP1I	GCGC	6 cut(s)	473, 481, 483, 500, 560, 920
HincII	GTYRAC	2 cut(s)	280, 1667
HindII	GTYRAC	2 cut(s)	280, 1667
HinfI	GANTC	5 cut(s)	256, 461, 507, 718, 1417
HphI	GGTGA	5 cut(s)	625, 670, 1042, 1640, 1717
Hpy188III	TCNNGA	7 cut(s)	406, 572, 708, 793, 892, 1241, 1280
Hpy99I	CGWCG	8 cut(s)	229, 319, 500, 515, 602, 1031, 1468, 1501
HpyAV	CCTTC	8 cut(s)	276, 352, 634, 805, 898, 960, 982, 990
HpyCH4IV	ACGT	8 cut(s)	537, 600, 954, 1142, 1247, 1499, 1669, 1700
HpyCH4V	TGCA	5 cut(s)	358, 541, 1224, 1258, 1733
HpyF3I	CTNAG	4 cut(s)	157, 365, 551, 1377
HpySE526I	ACGT	8 cut(s)	537, 600, 954, 1142, 1247, 1499, 1669, 1700
Hsp92I	GRCGYC	2 cut(s)	243, 920
Hsp92II	CATG	6 cut(s)	352, 1208, 1546, 1568, 1639, 1758
HspAI	GCGC	6 cut(s)	473, 481, 483, 500, 560, 920
KasI	GGCGCC	1 cut(s)	919
KroI	GCCGGC	2 cut(s)	190, 1157
KroNI	GCCGGC	2 cut(s)	192, 1159
Kzo9I	GATC	9 cut(s)	182, 302, 897, 909, 1201, 1437, 1452, 1468, 1561
LmnI	GCTCC	8 cut(s)	44, 53, 254, 456, 622, 652, 1115, 1576
Lsp1109I	GCAGC	2 cut(s)	342, 370
LweI	GCATC	1 cut(s)	1106
MaeI	CTAG	4 cut(s)	528, 690, 1530, 1610
MaeII	ACGT	8 cut(s)	537, 600, 954, 1142, 1247, 1499, 1669, 1700
MaeIII	GTNAC	4 cut(s)	662, 695, 1286, 1758
MalI	GATC	9 cut(s)	184, 304, 899, 911, 1203, 1439, 1454, 1470, 1563
MbiI	CCGCTC	2 cut(s)	48, 606
MboI	GATC	9 cut(s)	182, 302, 897, 909, 1201, 1437, 1452, 1468, 1561
MboII	GAAGA	3 cut(s)	986, 989, 1012
MflI	RGATCY	3 cut(s)	302, 1452, 1468
MhlI	GDGCHC	3 cut(s)	453, 557, 1260
MlsI	TGGCCA	1 cut(s)	1681
MluCI	AATT	3 cut(s)	1342, 1594, 1600
MluI	ACGCGT	1 cut(s)	312
MluNI	TGGCCA	1 cut(s)	1681
Mly113I	GGCGCC	1 cut(s)	920
MlyI	GAGTC	3 cut(s)	250, 455, 501
MmeI	TCCRAC	6 cut(s)	43, 51, 297, 630, 1446, 1520
Mox20I	TGGCCA	1 cut(s)	1681
MroNI	GCCGGC	2 cut(s)	190, 1157
MscI	TGGCCA	1 cut(s)	1681
MslI	CAYNNNNRTG	2 cut(s)	1430, 1772
Msp20I	TGGCCA	1 cut(s)	1681
Mva1269I	GAATGC	1 cut(s)	1778
MvaI	CCWGG	7 cut(s)	437, 455, 504, 533, 547, 671, 1683
MvnI	CGCG	7 cut(s)	314, 473, 481, 483, 500, 1191, 1463
NaeI	GCCGGC	2 cut(s)	192, 1159
NarI	GGCGCC	1 cut(s)	920
NciI	CCSGG	9 cut(s)	33, 299, 300, 522, 523, 611, 784, 785, 1650
NdeII	GATC	9 cut(s)	182, 302, 897, 909, 1201, 1437, 1452, 1468, 1561
NgoMIV	GCCGGC	2 cut(s)	190, 1157
NlaIII	CATG	6 cut(s)	352, 1208, 1546, 1568, 1639, 1758
NlaIV	GGNNCC	5 cut(s)	40, 414, 886, 921, 1454
NmeAIII	GCCGAG	2 cut(s)	536, 928
NmuCI	GTSAC	1 cut(s)	1286
NspI	RCATGY	1 cut(s)	1546
OliI	CACNNNNGTG	1 cut(s)	1772
PaeR7I	CTCGAG	2 cut(s)	446, 1586
PaqCI	CACCTGC	1 cut(s)	587
PauI	GCGCGC	1 cut(s)	481
PciI	ACATGT	1 cut(s)	1542
PcsI	WCGNNNNNNNCGW	3 cut(s)	395, 713, 1433
PctI	GAATGC	1 cut(s)	1778
PdiI	GCCGGC	2 cut(s)	192, 1159
PfeI	GAWTC	2 cut(s)	718, 1417
PflFI	GACNNNGTC	1 cut(s)	329
PfoI	TCCNGGA	1 cut(s)	453
PinAI	ACCGGT	2 cut(s)	1052, 1218
Ple19I	CGATCG	1 cut(s)	900
PleI	GAGTC	3 cut(s)	250, 455, 501
PluTI	GGCGCC	1 cut(s)	923
PpsI	GAGTC	3 cut(s)	250, 455, 501
PpuMI	RGGWCCY	1 cut(s)	885
PscI	ACATGT	1 cut(s)	1542
PshAI	GACNNNNGTC	1 cut(s)	494
Psp124BI	GAGCTC	2 cut(s)	453, 557
Psp1406I	AACGTT	1 cut(s)	1142
Psp5II	RGGWCCY	1 cut(s)	885
Psp6I	CCWGG	7 cut(s)	435, 453, 502, 531, 545, 669, 1681
PspEI	GGTNACC	1 cut(s)	1758
PspFI	CCCAGC	2 cut(s)	66, 625
PspGI	CCWGG	7 cut(s)	435, 453, 502, 531, 545, 669, 1681
PspN4I	GGNNCC	5 cut(s)	40, 414, 886, 921, 1454
PspPI	GGNCC	7 cut(s)	412, 589, 608, 628, 885, 1160, 1646
PspPPI	RGGWCCY	1 cut(s)	885
PspXI	VCTCGAGB	2 cut(s)	446, 1586
PstI	CTGCAG	1 cut(s)	360
PstNI	CAGNNNCTG	1 cut(s)	637
PsuI	RGATCY	3 cut(s)	302, 1452, 1468
PsyI	GACNNNGTC	1 cut(s)	329
PteI	GCGCGC	1 cut(s)	481
PvuI	CGATCG	1 cut(s)	900
RsaI	GTAC	4 cut(s)	971, 1300, 1526, 1541
RsaNI	GTAC	4 cut(s)	970, 1299, 1525, 1540
RseI	CAYNNNNRTG	2 cut(s)	1430, 1772
SacI	GAGCTC	2 cut(s)	453, 557
Sau3AI	GATC	9 cut(s)	182, 302, 897, 909, 1201, 1437, 1452, 1468, 1561
Sau96I	GGNCC	7 cut(s)	412, 589, 608, 628, 885, 1160, 1646
SchI	GAGTC	3 cut(s)	250, 455, 501
SduI	GDGCHC	3 cut(s)	453, 557, 1260
SfaNI	GCATC	1 cut(s)	1106
SfcI	CTRYAG	2 cut(s)	356, 1659
SfoI	GGCGCC	1 cut(s)	921
Sfr274I	CTCGAG	2 cut(s)	446, 1586
SgrAI	CRCCGGYG	1 cut(s)	1052
SinI	GGWCC	2 cut(s)	412, 885
SlaI	CTCGAG	2 cut(s)	446, 1586
SmaI	CCCGGG	3 cut(s)	300, 523, 785
SmiMI	CAYNNNNRTG	2 cut(s)	1430, 1772
SmlI	CTYRAG	2 cut(s)	446, 1586
SmoI	CTYRAG	2 cut(s)	446, 1586
SpeI	ACTAGT	1 cut(s)	689
Sse9I	AATT	3 cut(s)	1342, 1594, 1600
SspDI	GGCGCC	1 cut(s)	919
SspMI	CTAG	4 cut(s)	528, 690, 1530, 1610
SstI	GAGCTC	2 cut(s)	453, 557
StyI	CCWWGG	3 cut(s)	51, 870, 1514
TaiI	ACGT	8 cut(s)	540, 603, 957, 1145, 1250, 1502, 1672, 1703
TaqI	TCGA	6 cut(s)	291, 447, 510, 1262, 1436, 1587
TaqII	GACCGA	1 cut(s)	1786
TasI	AATT	3 cut(s)	1342, 1594, 1600
TatI	WGTACW	2 cut(s)	1524, 1539
TfiI	GAWTC	2 cut(s)	718, 1417
TscAI	CASTG	2 cut(s)	1711, 1774
TseFI	GTSAC	1 cut(s)	1286
TseI	GCWGC	2 cut(s)	355, 358
Tsp45I	GTSAC	1 cut(s)	1286
TspDTI	ATGAA	4 cut(s)	1009, 1114, 1300, 1652
TspGWI	ACGGA	1 cut(s)	891
TspMI	CCCGGG	3 cut(s)	298, 521, 783
TspRI	CASTG	2 cut(s)	1711, 1774
Tth111I	GACNNNGTC	1 cut(s)	329
VneI	GTGCAC	1 cut(s)	1256
VpaK11BI	GGWCC	2 cut(s)	412, 885
XapI	RAATTY	1 cut(s)	1594
XceI	RCATGY	1 cut(s)	1546
XhoI	CTCGAG	2 cut(s)	446, 1586
XmaI	CCCGGG	3 cut(s)	298, 521, 783
XmiI	GTMKAC	1 cut(s)	1215
XspI	CTAG	4 cut(s)	528, 690, 1530, 1610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.