AT3G49740

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
18447725 .. 18450136
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G49740.1

Sequence Viewer

Length: 2214 bp
ATGAGAAAAGCTCTATGTTTAACAGAGAGTTTATCAGCCATAGCAGAAAACTCTACCACGTTGCTCAATTTAAACCGGAGACTAACGGGTCTCACTCGTTCCGGCGAGAACAGAAACGCTCTCAAGCTCTTCGCCGATGTTCACCGTTGCACAACTCTGAGACCAGACCAGTACAGTGTCTCGTTAGCTATTACTACAGCTAGGCACCTCCGTGATACTATCTTTGGTGGTCAGGTTCATTGCTATGCGATTCGCTCTGGTTTATTGTGTCACTCTCACGTTTCCAATACGCTTCTTTCGCTATATGAGAGATTAGGGAACTTAGCTTCGTTGAAGAAGAAGTTCGACGAGATTGATGAACCTGATGTTTATTCATGGACGACGCTTCTGAGTGCAAGTTTTAAGCTTGGTGATATAGAGTATGCCTTTGAGGTGTTTGATAAAATGCCTGAGAGAGATGATGTTGCGATTTGGAATGCTATGATTACTGGTTGCAAAGAGAGTGGGTATCACGAAACGAGTGTTGAGTTGTTTCGAGAAATGCATAAGCTTGGTGTTCGACATGATAAGTTTGGGTTTGCTACTATTTTGAGTATGTGTGACTATGGTTCTTTGGATTTTGGTAAGCAGGTGCATTCGCTGGTTATAAAAGCTGGATTTTTTATTGCTTCATCTGTTGTGAATGCACTAATTACAATGTATTTCAATTGCCAAGTGGTTGTTGATGCTTGTCTGGTGTTTGAAGAAACTGATGTTGCTGTTCGTGATCAGGTTACTTTTAATGTGGTTATTGATGGTTTGGCTGGTTTCAAAAGAGACGAGTCTTTGTTGGTGTTTAGAAAAATGCTAGAAGCTAGTCTTAGACCAACCGATTTGACCTTTGTTAGTGTTATGGGTTCATGTTCATGTGCGGCTATGGGACACCAAGTACATGGACTAGCCATCAAGACAGGTTATGAGAAGTATACTTTGGTTAGCAATGCCACTATGACAATGTATTCTTCTTTTGAAGATTTTGGTGCGGCTCATAAGGTTTTTGAGTCATTGGAAGAGAAAGACTTGGTTACTTGGAACACAATGATCTCAAGTTATAACCAAGCGAAATTGGGCAAGTCTGCGATGTCGGTATACAAGAGAATGCACATAATAGGAGTTAAACCGGATGAGTTTACTTTTGGAAGTCTTTTAGCAACCTCTCTGGATTTAGATGTCCTGGAGATGGTTCAAGCGTGTATAATCAAGTTTGGGCTTAGTTCAAAGATTGAAATTTCCAATGCGTTGATATCTGCCTACTCGAAGAATGGACAGATAGAAAAAGCTGACCTATTATTTGAAAGATCTCTGAGGAAGAATCTTATCTCATGGAATGCGATAATCTCAGGGTTTTACCATAACGGGTTTCCTTTTGAAGGTTTGGAAAGGTTCTCGTGCTTGCTAGAGTCAGAGGTCCGAATCCTACCTGATGCTTATACTCTCAGTACCCTTTTGAGCATTTGCGTAAGCACTTCATCTTTGATGCTCGGAAGCCAAACTCACGCTTACGTCCTTAGACACGGCCAATTCAAGGAGACATTGATAGGTAATGCCCTCATAAACATGTACTCTCAATGCGGGACTATACAAAACTCTCTTGAAGTGTTCAATCAGATGTCTGAAAAAGATGTTGTGTCATGGAATTCTCTGATCTCTGCATACTCGAGACACGGTGAAGGAGAGAACGCGGTTAATACCTACAAGACAATGCAAGATGAAGGAAAGGTCATTCCCGATGCAGCCACATTCTCAGCGGTTCTCTCTGCTTGCAGCCACGCCGGTTTAGTGGAAGAGGGACTCGAGATTTTCAACTCAATGGTGGAATTTCACGGTGTGATACGAAATGTAGATCATTTTTCATGCTTAGTTGACCTTCTTGGTCGAGCGGGCCACCTCGATGAAGCGGAAAGCTTGGTGAAAATCAGCGAAAAGACCATCGGGTCTCGGGTAGATGTGTGGTGGGCTTTGTTTAGTGCTTGTGCTGCTCATGGAGATTTGAAGCTAGGGAAGATGGTTGCGAAGTTACTAATGGAGAAAGAGAAGGATGATCCATCAGTTTATGTTCAACTGTCCAATATCTACGCAGGAGCTGGTATGTGGAAAGAAGCAGAAGAGACGAGAAGAGCCATAAACATGATTGGAGCTATGAAACAACGAGGTTGCAGCTGGATGAGATTGTAA

Protein Analysis

737

Amino Acids

82.01

Weight (kDa)

5.96

Isoelectric Point (pI)

35.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 154 - 200 4.3e-06 PPR repeat family
PPR_2 PF13041 353 - 396 1.4e-08 PPR repeat family
PPR_2 PF13041 553 - 602 2.2e-10 PPR repeat family
PPR PF01535 556 - 585 2.9e-06 PPR repeat
E_motif PF20431 674 - 735 1.1e-11 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016025)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49740
fragaria_vesca FvH4_1g18310
malus_domestica MD02G1190400.v1.1
prunus_persica Prupe.6G216000_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0108961
rosa_laevigata RLG00000017696
rosa_multiflora Rmu_sc0014080.1_g000004 Rmu_sc0038162.1_g000001
rosa_roxburghii Rroxscaffold_2G00134680
rosa_rugosa Rorug02G0156700
rosa_samantha Rh2AG207300 Rh2BG218500 Rh2CG210500 Rh2DG213500
rosa_wichuraiana Rw0G011000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 647, 1092
AarI CACCTGC 1 cut(s) 619
AasI GACNNNNNNGTC 2 cut(s) 87, 1972
Acc36I ACCTGC 1 cut(s) 619
AccB1I GGYRCC 1 cut(s) 204
AccBSI CCGCTC 1 cut(s) 1919
AccI GTMKAC 2 cut(s) 965, 1128
AccII CGCG 1 cut(s) 1721
AciI CCGC 7 cut(s) 911, 1022, 1611, 1721, 1787, 1919, 1937
AclWI GGATC 1 cut(s) 2075
AcoI YGGCCR 1 cut(s) 1555
AcsI RAATTY 3 cut(s) 1266, 1675, 1856
AdeI CACNNNGTG 1 cut(s) 1867
AfaI GTAC 4 cut(s) 173, 930, 1480, 1601
AfiI CCNNNNNNNGG 3 cut(s) 1219, 1409, 1564
AflIII ACRYGT 1 cut(s) 1596
AjnI CCWGG 1 cut(s) 1212
AjuI GAANNNNNNNTTGG 2 cut(s) 953, 985
AleI CACNNNNGTG 1 cut(s) 210
Alw26I GTCTC 9 cut(s) 73, 95, 154, 184, 810, 1562, 1693, 1980, 2141
AlwI GGATC 1 cut(s) 2075
AlwNI CAGNNNCTG 1 cut(s) 2123
Ama87I CYCGRG 3 cut(s) 1696, 1832, 1977
AoxI GGCC 2 cut(s) 1555, 1921
ApeKI GCWGC 4 cut(s) 1772, 1803, 2015, 2196
ApoI RAATTY 3 cut(s) 1266, 1675, 1856
ArsI GACNNNNNNTTYG 2 cut(s) 1313, 1345
Asp700I GAANNNNTTC 1 cut(s) 341
AspS9I GGNCC 2 cut(s) 1447, 1921
AsuHPI GGTGA 4 cut(s) 134, 422, 1718, 1960
AvaI CYCGRG 3 cut(s) 1696, 1832, 1977
AvaII GGWCC 1 cut(s) 1447
BanI GGYRCC 1 cut(s) 204
BauI CACGAG 1 cut(s) 1426
BbvI GCAGC 4 cut(s) 1784, 1815, 2002, 2208
BccI CCATC 6 cut(s) 788, 950, 1213, 1976, 2038, 2092
BceAI ACGGC 1 cut(s) 1570
BciT130I CCWGG 1 cut(s) 1214
BclI TGATCA 1 cut(s) 766
BcoDI GTCTC 9 cut(s) 73, 95, 154, 184, 810, 1562, 1693, 1980, 2141
BfaI CTAG 6 cut(s) 201, 848, 855, 938, 1436, 2036
BfmI CTRYAG 1 cut(s) 195
BfuAI ACCTGC 1 cut(s) 619
BglII AGATCT 1 cut(s) 1337
BisI GCNGC 6 cut(s) 912, 1023, 1773, 1804, 2016, 2197
BlsI GCNGC 6 cut(s) 913, 1024, 1774, 1805, 2017, 2198
Bme1390I CCNGG 1 cut(s) 1214
Bme18I GGWCC 1 cut(s) 1447
BmeT110I CYCGRG 3 cut(s) 1696, 1832, 1977
BmgT120I GGNCC 2 cut(s) 1447, 1921
BmiI GGNNCC 1 cut(s) 206
BmrFI CCNGG 1 cut(s) 1214
BmsI GCATC 4 cut(s) 715, 1453, 1506, 1759
BplI GAGNNNNNCTC 1 cut(s) 27
BpmI CTGGAG 1 cut(s) 1235
BpuEI CTTGAG 2 cut(s) 107, 1069
BsaI GGTCTC 3 cut(s) 95, 154, 1980
BsaWI WCCGGW 2 cut(s) 75, 1159
Bsc4I CCNNNNNNNGG 3 cut(s) 1219, 1409, 1564
Bse118I RCCGGY 1 cut(s) 1811
Bse1I ACTGG 2 cut(s) 169, 493
Bse3DI GCAATG 2 cut(s) 238, 985
BseBI CCWGG 1 cut(s) 1214
BseGI GGATG 3 cut(s) 1168, 2083, 2208
BseLI CCNNNNNNNGG 3 cut(s) 1219, 1409, 1564
BseMI GCAATG 2 cut(s) 238, 985
BseMII CTCAG 7 cut(s) 149, 380, 441, 1334, 1392, 1489, 1797
BseNI ACTGG 2 cut(s) 169, 493
BseXI GCAGC 4 cut(s) 1784, 1815, 2002, 2208
Bsh1236I CGCG 1 cut(s) 1721
BshFI GGCC 2 cut(s) 1557, 1923
BshNI GGYRCC 1 cut(s) 204
BsiHKCI CYCGRG 3 cut(s) 1696, 1832, 1977
BsiSI CCGG 4 cut(s) 76, 102, 1160, 1812
BslFI GGGAC 3 cut(s) 933, 1627, 1842
BslI CCNNNNNNNGG 3 cut(s) 1219, 1409, 1564
BsmAI GTCTC 9 cut(s) 73, 95, 154, 184, 810, 1562, 1693, 1980, 2141
BsmBI CGTCTC 2 cut(s) 810, 2141
BsmFI GGGAC 3 cut(s) 933, 1627, 1842
BsmI GAATGC 5 cut(s) 481, 634, 688, 1143, 1372
BsnI GGCC 2 cut(s) 1557, 1923
Bso31I GGTCTC 3 cut(s) 95, 154, 1980
BsoBI CYCGRG 3 cut(s) 1696, 1832, 1977
Bsp143I GATC 6 cut(s) 766, 1080, 1337, 1683, 1882, 2080
BspACI CCGC 7 cut(s) 911, 1022, 1611, 1721, 1787, 1919, 1937
BspANI GGCC 2 cut(s) 1557, 1923
BspCNI CTCAG 7 cut(s) 150, 381, 442, 1335, 1391, 1488, 1796
BspFNI CGCG 1 cut(s) 1721
BspLI GGNNCC 1 cut(s) 206
BspMI ACCTGC 1 cut(s) 619
BspPI GGATC 1 cut(s) 2075
BspQI GCTCTTC 2 cut(s) 134, 2149
BspT107I GGYRCC 1 cut(s) 204
BspTNI GGTCTC 3 cut(s) 95, 154, 1980
BsrBI CCGCTC 1 cut(s) 1919
BsrDI GCAATG 2 cut(s) 238, 985
BsrFI RCCGGY 1 cut(s) 1811
BsrI ACTGG 2 cut(s) 169, 493
BssAI RCCGGY 1 cut(s) 1811
BssMI GATC 6 cut(s) 766, 1080, 1337, 1683, 1882, 2080
BssNAI GTATAC 2 cut(s) 966, 1129
BssSI CACGAG 1 cut(s) 1426
Bst1107I GTATAC 2 cut(s) 966, 1129
Bst2BI CACGAG 1 cut(s) 1426
Bst2UI CCWGG 1 cut(s) 1214
Bst4CI ACNGT 5 cut(s) 146, 176, 1706, 1865, 2103
Bst6I CTCTTC 5 cut(s) 134, 1044, 1818, 2139, 2149
BstC8I GCNNGC 3 cut(s) 1433, 1801, 1921
BstENI CCTNNNNNAGG 1 cut(s) 1407
BstF5I GGATG 3 cut(s) 1168, 2083, 2208
BstFNI CGCG 1 cut(s) 1721
BstKTI GATC 6 cut(s) 769, 1083, 1340, 1686, 1885, 2083
BstMAI GTCTC 9 cut(s) 73, 95, 154, 184, 810, 1562, 1693, 1980, 2141
BstMBI GATC 6 cut(s) 766, 1080, 1337, 1683, 1882, 2080
BstMWI GCNNNNNNNGC 2 cut(s) 298, 2015
BstNI CCWGG 1 cut(s) 1214
BstNSI RCATGY 1 cut(s) 1600
BstSCI CCNGG 1 cut(s) 1212
BstSFI CTRYAG 1 cut(s) 195
BstUI CGCG 1 cut(s) 1721
BstV1I GCAGC 4 cut(s) 1784, 1815, 2002, 2208
BstX2I RGATCY 1 cut(s) 1337
BstXI CCANNNNNNTGG 1 cut(s) 932
BstYI RGATCY 1 cut(s) 1337
BstZ17I GTATAC 2 cut(s) 966, 1129
BsuRI GGCC 2 cut(s) 1557, 1923
BtgZI GCGATG 1 cut(s) 1133
BtsCI GGATG 3 cut(s) 1168, 2083, 2208
BtsIMutI CAGTG 1 cut(s) 181
BveI ACCTGC 1 cut(s) 619
Cac8I GCNNGC 3 cut(s) 1433, 1801, 1921
CaiI CAGNNNCTG 1 cut(s) 2123
Cfr10I RCCGGY 1 cut(s) 1811
Cfr13I GGNCC 2 cut(s) 1447, 1921
CseI GACGC 1 cut(s) 391
Csp6I GTAC 4 cut(s) 172, 929, 1479, 1600
CspCI CAANNNNNGTGG 2 cut(s) 484, 519
CviQI GTAC 4 cut(s) 172, 929, 1479, 1600
DpnI GATC 6 cut(s) 768, 1082, 1339, 1685, 1884, 2082
DpnII GATC 6 cut(s) 766, 1080, 1337, 1683, 1882, 2080
DraI TTTAAA 1 cut(s) 72
DraIII CACNNNGTG 1 cut(s) 1867
DrdI GACNNNNNNGTC 2 cut(s) 87, 1972
DseDI GACNNNNNNGTC 2 cut(s) 87, 1972
EaeI YGGCCR 1 cut(s) 1555
Eam1104I CTCTTC 5 cut(s) 134, 1044, 1818, 2139, 2149
EarI CTCTTC 5 cut(s) 134, 1044, 1818, 2139, 2149
Eco31I GGTCTC 3 cut(s) 95, 154, 1980
Eco32I GATATC 1 cut(s) 1284
Eco47I GGWCC 1 cut(s) 1447
Eco88I CYCGRG 3 cut(s) 1696, 1832, 1977
EcoNI CCTNNNNNAGG 1 cut(s) 1407
EcoRI GAATTC 1 cut(s) 1675
EcoRII CCWGG 1 cut(s) 1212
EcoRV GATATC 1 cut(s) 1284
EcoT22I ATGCAT 1 cut(s) 546
Esp3I CGTCTC 2 cut(s) 810, 2141
FalI AAGNNNNNCTT 2 cut(s) 843, 875
FaqI GGGAC 3 cut(s) 933, 1627, 1842
FauI CCCGC 2 cut(s) 1604, 1912
FbaI TGATCA 1 cut(s) 766
FblI GTMKAC 2 cut(s) 965, 1128
Fnu4HI GCNGC 6 cut(s) 912, 1023, 1773, 1804, 2016, 2197
FokI GGATG 2 cut(s) 1175, 2090
Fsp4HI GCNGC 6 cut(s) 912, 1023, 1773, 1804, 2016, 2197
FspBI CTAG 6 cut(s) 201, 848, 855, 938, 1436, 2036
GluI GCNGC 6 cut(s) 912, 1023, 1773, 1804, 2016, 2197
GsuI CTGGAG 1 cut(s) 1235
HaeIII GGCC 2 cut(s) 1557, 1923
HapII CCGG 4 cut(s) 76, 102, 1160, 1812
HgaI GACGC 1 cut(s) 391
HincII GTYRAC 1 cut(s) 1903
HindII GTYRAC 1 cut(s) 1903
HindIII AAGCTT 3 cut(s) 404, 548, 1942
HinfI GANTC 7 cut(s) 250, 821, 1040, 1351, 1439, 1452, 1830
HpaII CCGG 4 cut(s) 76, 102, 1160, 1812
HphI GGTGA 4 cut(s) 134, 422, 1718, 1960
Hpy166II GTNNAC 5 cut(s) 142, 966, 1129, 1170, 1903
Hpy188I TCNGA 9 cut(s) 159, 390, 1344, 1444, 1451, 1523, 1647, 1654, 1683
Hpy188III TCNNGA 9 cut(s) 512, 536, 764, 946, 1199, 1631, 1698, 1766, 1834
Hpy8I GTNNAC 5 cut(s) 142, 966, 1129, 1170, 1903
Hpy99I CGWCG 2 cut(s) 350, 385
HpyAV CCTTC 5 cut(s) 1403, 1703, 1745, 1916, 2068
HpyCH4III ACNGT 5 cut(s) 146, 176, 1706, 1865, 2103
HpyCH4IV ACGT 3 cut(s) 59, 279, 1542
HpyF10VI GCNNNNNNNGC 2 cut(s) 298, 2015
HpySE526I ACGT 3 cut(s) 59, 279, 1542
Ksp22I TGATCA 1 cut(s) 766
Kzo9I GATC 6 cut(s) 766, 1080, 1337, 1683, 1882, 2080
LguI GCTCTTC 2 cut(s) 134, 2149
LmnI GCTCC 2 cut(s) 2120, 2174
Lsp1109I GCAGC 4 cut(s) 1784, 1815, 2002, 2208
LweI GCATC 4 cut(s) 715, 1453, 1506, 1759
MaeI CTAG 6 cut(s) 201, 848, 855, 938, 1436, 2036
MaeII ACGT 3 cut(s) 59, 279, 1542
MaeIII GTNAC 5 cut(s) 269, 599, 772, 1063, 2055
MalI GATC 6 cut(s) 768, 1082, 1339, 1685, 1884, 2082
MbiI CCGCTC 1 cut(s) 1919
MboI GATC 6 cut(s) 766, 1080, 1337, 1683, 1882, 2080
MfeI CAATTG 1 cut(s) 706
MflI RGATCY 1 cut(s) 1337
MluCI AATT 8 cut(s) 67, 690, 706, 1103, 1266, 1559, 1675, 1856
MlyI GAGTC 4 cut(s) 830, 1049, 1448, 1824
MnlI CCTC 9 cut(s) 218, 424, 1204, 1338, 1438, 1598, 1819, 1937, 2183
Mph1103I ATGCAT 1 cut(s) 546
MroXI GAANNNNTTC 1 cut(s) 341
MseI TTAA 6 cut(s) 20, 71, 402, 780, 1155, 1725
MslI CAYNNNNRTG 6 cut(s) 210, 243, 904, 1595, 1929, 2165
MspA1I CMGCKG 2 cut(s) 1787, 2199
MspI CCGG 4 cut(s) 76, 102, 1160, 1812
MspR9I CCNGG 1 cut(s) 1214
MunI CAATTG 1 cut(s) 706
Mva1269I GAATGC 5 cut(s) 481, 634, 688, 1143, 1372
MvaI CCWGG 1 cut(s) 1214
MvnI CGCG 1 cut(s) 1721
MwoI GCNNNNNNNGC 2 cut(s) 298, 2015
NdeII GATC 6 cut(s) 766, 1080, 1337, 1683, 1882, 2080
NlaIV GGNNCC 1 cut(s) 206
NmuCI GTSAC 2 cut(s) 269, 599
NsiI ATGCAT 1 cut(s) 546
NspI RCATGY 1 cut(s) 1600
OliI CACNNNNGTG 1 cut(s) 210
PaeR7I CTCGAG 2 cut(s) 1696, 1832
PaqCI CACCTGC 1 cut(s) 619
PciI ACATGT 1 cut(s) 1596
PciSI GCTCTTC 2 cut(s) 134, 2149
PctI GAATGC 5 cut(s) 481, 634, 688, 1143, 1372
PdmI GAANNNNTTC 1 cut(s) 341
PfeI GAWTC 3 cut(s) 250, 1351, 1452
PfoI TCCNGGA 1 cut(s) 1212
PkrI GCNGC 6 cut(s) 913, 1024, 1774, 1805, 2017, 2198
PleI GAGTC 4 cut(s) 829, 1048, 1447, 1824
PpsI GAGTC 4 cut(s) 829, 1048, 1447, 1824
PscI ACATGT 1 cut(s) 1596
PsiI TTATAA 2 cut(s) 647, 1092
Psp6I CCWGG 1 cut(s) 1212
PspGI CCWGG 1 cut(s) 1212
PspN4I GGNNCC 1 cut(s) 206
PspPI GGNCC 2 cut(s) 1447, 1921
PstNI CAGNNNCTG 1 cut(s) 2123
PsuI RGATCY 1 cut(s) 1337
PvuII CAGCTG 1 cut(s) 2199
RsaI GTAC 4 cut(s) 173, 930, 1480, 1601
RsaNI GTAC 4 cut(s) 172, 929, 1479, 1600
RseI CAYNNNNRTG 6 cut(s) 210, 243, 904, 1595, 1929, 2165
SapI GCTCTTC 2 cut(s) 134, 2149
SaqAI TTAA 6 cut(s) 20, 71, 402, 780, 1155, 1725
SatI GCNGC 6 cut(s) 912, 1023, 1773, 1804, 2016, 2197
Sau3AI GATC 6 cut(s) 766, 1080, 1337, 1683, 1882, 2080
Sau96I GGNCC 2 cut(s) 1447, 1921
SchI GAGTC 4 cut(s) 830, 1049, 1448, 1824
ScrFI CCNGG 1 cut(s) 1214
SfaNI GCATC 4 cut(s) 715, 1453, 1506, 1759
SfcI CTRYAG 1 cut(s) 195
Sfr274I CTCGAG 2 cut(s) 1696, 1832
SinI GGWCC 1 cut(s) 1447
SlaI CTCGAG 2 cut(s) 1696, 1832
SmiMI CAYNNNNRTG 6 cut(s) 210, 243, 904, 1595, 1929, 2165
SmlI CTYRAG 4 cut(s) 122, 1084, 1696, 1832
SmoI CTYRAG 4 cut(s) 122, 1084, 1696, 1832
Sse9I AATT 8 cut(s) 67, 690, 706, 1103, 1266, 1559, 1675, 1856
SsiI CCGC 7 cut(s) 911, 1022, 1611, 1721, 1787, 1919, 1937
SspMI CTAG 6 cut(s) 201, 848, 855, 938, 1436, 2036
StyD4I CCNGG 1 cut(s) 1212
TaaI ACNGT 5 cut(s) 146, 176, 1706, 1865, 2103
TaiI ACGT 3 cut(s) 62, 282, 1545
TaqI TCGA 8 cut(s) 345, 535, 559, 1295, 1697, 1833, 1915, 1929
TasI AATT 8 cut(s) 67, 690, 706, 1103, 1266, 1559, 1675, 1856
TatI WGTACW 3 cut(s) 171, 928, 1599
TauI GCSGC 2 cut(s) 914, 1025
TfiI GAWTC 3 cut(s) 250, 1351, 1452
Tru1I TTAA 6 cut(s) 20, 71, 402, 780, 1155, 1725
Tru9I TTAA 6 cut(s) 20, 71, 402, 780, 1155, 1725
TscAI CASTG 1 cut(s) 181
TseFI GTSAC 2 cut(s) 269, 599
TseI GCWGC 4 cut(s) 1772, 1803, 2015, 2196
Tsp45I GTSAC 2 cut(s) 269, 599
TspGWI ACGGA 1 cut(s) 200
TspRI CASTG 1 cut(s) 181
VpaK11BI GGWCC 1 cut(s) 1447
XagI CCTNNNNNAGG 1 cut(s) 1407
XapI RAATTY 3 cut(s) 1266, 1675, 1856
XceI RCATGY 1 cut(s) 1600
XhoI CTCGAG 2 cut(s) 1696, 1832
XmiI GTMKAC 2 cut(s) 965, 1128
XmnI GAANNNNTTC 1 cut(s) 341
XspI CTAG 6 cut(s) 201, 848, 855, 938, 1436, 2036
Zsp2I ATGCAT 1 cut(s) 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.