Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0038162.1

Orthogroup ID

OG0016025

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 1606

Gene Structure 1606 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0038162.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1606 bp

ccgtcaccgcctgcgcgaagttacgcgacattgttttcggcacccaacttcacggcaacgccgtccggtccggcctcaaagtctttcctcacgtggccaatccgctgctctcgctttatgcgaaagcggaagatttgaatgctgtgagatgggtgtttgatgagattgcagacccagacgtttattcgtggacgacgctgctgtcggcttgtgttaaattggggcatgtggactatgcatgtgaggtgttcgataaaatgcctcagaagggtaatgtggcgatttggaatgcgatgattaccgggtgcgccgagaatggggatgaggaggttgcttttagtttgttttgtgaaatgcataggatgggtgttaagcatgataattttagtgttgctagtgtgttgagtttgtgttgtttggagtctgtgggatttgggaggcaggtgcattgtttagtgattagaaccgggtttttaggaagagcttctgttgtgaacgctctgcttactatgtattttaactgcgcaagtgttgcggaggcatttgaggtgtttgaagaagcagaagatggggtgtatgatcagattacttttaatgtgatgattgatggtttggtgggtgtgggaagagatgaagaggctttgacaatgttcaaagggatgcaagaggcgtgtcttaggcctactgagctgacttttgtgagtgtcatgagctcacgttcagctgcaagagttgctaaccatgtacatgcgcaggcgattaagttgggttttgaagctttcactgctgtgggcaatgcagcaattaccatgttttctggttgtggggattggcaagcggcttacctggtttttcagacattggaagagaaggatcttatatcatggaatgccatgatctcgacttatgctcaagtgaatgaccgtgaatcagccgttttggtctatctgcaaatgcagagggaaggagagaaaccagatgagtttacttatggaagtttgttggcaagctctgagtatattgagaccatgcaaatgattcaggctgttgcacacaaaaatgggcttatccttaaaatccaagttttgaatgcaatggtttctgcatatgctaggcagggtcagatgaatctagcccatcagacattccaagatatcaaatgcaaaaatttgatcacctggaatgctattatttctggattcctgttgaacggaatggtaaatgaagggttagagcaatttcatgagctgcttgtgtcagaactcagtccagatgtgtataccctgagtataattgtaagcatgtgcgcaagcataacatccttgagagatggaaaaccagttcatgcctacattctcaaatttgggttttctcaacaactgtgcttaggtaatgccctcattacgatgtattctaaatgcggggttttagattgctcggtaagagtgtttgaagcaatgaatgaaaaggatatagtctcctggaatgccctgatatcagcttatgcacaacatgggaaaggaaaggaagctgttgattgttttgaggcgatgcaagacttgtcttccatcacaccagaccaggcaaccttcactgcagttctttc

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

535

Amino Acids

58.87

Weight (kDa)

4.99

Isoelectric Point (pI)

29.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49740
fragaria_vesca	FvH4_1g18310
malus_domestica	MD02G1190400.v1.1
prunus_persica	Prupe.6G216000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0108961
rosa_laevigata	RLG00000017696
rosa_multiflora	Rmu_sc0014080.1_g000004 Rmu_sc0038162.1_g000001
rosa_roxburghii	Rroxscaffold_2G00134680
rosa_rugosa	Rorug02G0156700
rosa_samantha	Rh2AG207300 Rh2BG218500 Rh2CG210500 Rh2DG213500
rosa_wichuraiana	Rw0G011000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	432
AasI	GACNNNNNNGTC	1 cut(s)	201
Acc16I	TGCGCA	3 cut(s)	525, 752, 1308
Acc36I	ACCTGC	1 cut(s)	432
AccB1I	GGYRCC	1 cut(s)	40
AccI	GTMKAC	1 cut(s)	1279
AccII	CGCG	2 cut(s)	16, 26
AciI	CCGC	6 cut(s)	8, 103, 127, 535, 838, 1421
AclWI	GGATC	1 cut(s)	881
AcoI	YGGCCR	1 cut(s)	95
AcsI	RAATTY	2 cut(s)	1167, 1360
AcvI	CACGTG	1 cut(s)	93
AfaI	GTAC	1 cut(s)	746
AfiI	CCNNNNNNNGG	2 cut(s)	268, 317
AgsI	TTSAA	7 cut(s)	138, 556, 654, 775, 1089, 1209, 1453
AjnI	CCWGG	4 cut(s)	845, 1177, 1480, 1580
AleI	CACNNNNGTG	1 cut(s)	787
AloI	GAACNNNNNNTCC	2 cut(s)	1325, 1357
AluBI	AGCT	9 cut(s)	484, 690, 713, 724, 778, 1010, 1248, 1501, 1531
AluI	AGCT	9 cut(s)	484, 690, 713, 724, 778, 1010, 1248, 1501, 1531
Alw21I	GWGCWC	1 cut(s)	715
Alw26I	GTCTC	2 cut(s)	1018, 1482
AlwI	GGATC	1 cut(s)	881
AoxI	GGCC	3 cut(s)	72, 95, 679
ApeKI	GCWGC	5 cut(s)	105, 198, 724, 799, 1248
ApoI	RAATTY	2 cut(s)	1167, 1360
ArsI	GACNNNNNNTTYG	2 cut(s)	19, 51
Asp700I	GAANNNNTTC	1 cut(s)	483
AspLEI	GCGC	5 cut(s)	16, 310, 526, 753, 1309
AspS9I	GGNCC	1 cut(s)	68
AsuC2I	CCSGG	2 cut(s)	303, 468
AsuHPI	GGTGA	1 cut(s)	1167
AvaII	GGWCC	1 cut(s)	68
BalI	TGGCCA	1 cut(s)	97
BanI	GGYRCC	1 cut(s)	40
BanII	GRGCYC	1 cut(s)	715
BbrPI	CACGTG	1 cut(s)	93
BbsI	GAAGAC	1 cut(s)	1556
Bbv12I	GWGCWC	1 cut(s)	715
BbvI	GCAGC	5 cut(s)	92, 185, 711, 811, 1235
BccI	CCATC	7 cut(s)	143, 357, 562, 601, 1145, 1324, 1576
BceAI	ACGGC	3 cut(s)	46, 69, 919
BciT130I	CCWGG	4 cut(s)	847, 1179, 1482, 1582
BclI	TGATCA	2 cut(s)	579, 1172
BcnI	CCSGG	2 cut(s)	303, 468
BcoDI	GTCTC	2 cut(s)	1018, 1482
BfaI	CTAG	3 cut(s)	395, 1112, 1132
BfmI	CTRYAG	1 cut(s)	1595
BfuAI	ACCTGC	1 cut(s)	432
BisI	GCNGC	6 cut(s)	106, 199, 725, 800, 839, 1249
BlsI	GCNGC	6 cut(s)	107, 200, 726, 801, 840, 1250
Bme1390I	CCNGG	6 cut(s)	303, 468, 847, 1179, 1482, 1582
Bme18I	GGWCC	1 cut(s)	68
BmgT120I	GGNCC	1 cut(s)	68
BmiI	GGNNCC	1 cut(s)	42
BmrFI	CCNGG	6 cut(s)	303, 468, 847, 1179, 1482, 1582
BmsI	GCATC	2 cut(s)	650, 1541
BpiI	GAAGAC	1 cut(s)	1556
Bpu10I	CCTNAGC	1 cut(s)	1386
BpuEI	CTTGAG	2 cut(s)	896, 1344
BpuMI	CCSGG	2 cut(s)	303, 468
BsaAI	YACGTR	1 cut(s)	93
BsaI	GGTCTC	1 cut(s)	1018
BsaWI	WCCGGW	1 cut(s)	65
Bsc4I	CCNNNNNNNGG	2 cut(s)	268, 317
Bse1I	ACTGG	1 cut(s)	1339
Bse3DI	GCAATG	3 cut(s)	801, 1100, 1463
BseBI	CCWGG	4 cut(s)	847, 1179, 1482, 1582
BseGI	GGATG	4 cut(s)	327, 368, 665, 1318
BseLI	CCNNNNNNNGG	2 cut(s)	268, 317
BseMI	GCAATG	3 cut(s)	801, 1100, 1463
BseMII	CTCAG	5 cut(s)	277, 677, 1004, 1276, 1278
BseNI	ACTGG	1 cut(s)	1339
BseRI	GAGGAG	1 cut(s)	340
BseXI	GCAGC	5 cut(s)	92, 185, 711, 811, 1235
Bsh1236I	CGCG	2 cut(s)	16, 26
BshFI	GGCC	3 cut(s)	74, 97, 681
BshNI	GGYRCC	1 cut(s)	40
BsiHKAI	GWGCWC	1 cut(s)	715
BsiSI	CCGG	4 cut(s)	66, 71, 302, 467
BslI	CCNNNNNNNGG	2 cut(s)	268, 317
BsmAI	GTCTC	2 cut(s)	1018, 1482
BsmI	GAATGC	6 cut(s)	144, 294, 894, 1095, 1188, 1491
BsnI	GGCC	3 cut(s)	74, 97, 681
Bso31I	GGTCTC	1 cut(s)	1018
Bsp1286I	GDGCHC	1 cut(s)	715
Bsp1407I	TGTACA	1 cut(s)	744
Bsp143I	GATC	4 cut(s)	579, 873, 896, 1172
BspACI	CCGC	6 cut(s)	8, 103, 127, 535, 838, 1421
BspANI	GGCC	3 cut(s)	74, 97, 681
BspCNI	CTCAG	5 cut(s)	276, 678, 1005, 1277, 1277
BspFNI	CGCG	2 cut(s)	16, 26
BspHI	TCATGA	2 cut(s)	707, 1242
BspLI	GGNNCC	1 cut(s)	42
BspMAI	CTGCAG	1 cut(s)	1599
BspMI	ACCTGC	1 cut(s)	432
BspPI	GGATC	1 cut(s)	881
BspQI	GCTCTTC	1 cut(s)	474
BspT107I	GGYRCC	1 cut(s)	40
BspTNI	GGTCTC	1 cut(s)	1018
BsrDI	GCAATG	3 cut(s)	801, 1100, 1463
BsrGI	TGTACA	1 cut(s)	744
BsrI	ACTGG	1 cut(s)	1339
BssMI	GATC	4 cut(s)	579, 873, 896, 1172
BssNAI	GTATAC	1 cut(s)	1280
Bst1107I	GTATAC	1 cut(s)	1280
Bst2UI	CCWGG	4 cut(s)	847, 1179, 1482, 1582
Bst4CI	ACNGT	2 cut(s)	925, 1382
Bst6I	CTCTTC	4 cut(s)	474, 621, 629, 860
BstAPI	GCANNNNNTGC	2 cut(s)	532, 733
BstAUI	TGTACA	1 cut(s)	744
BstBAI	YACGTR	1 cut(s)	93
BstC8I	GCNNGC	5 cut(s)	12, 755, 836, 1008, 1311
BstDEI	CTNAG	7 cut(s)	263, 676, 686, 1013, 1264, 1285, 1386
BstF5I	GGATG	4 cut(s)	327, 368, 665, 1318
BstFNI	CGCG	2 cut(s)	16, 26
BstHHI	GCGC	5 cut(s)	16, 310, 526, 753, 1309
BstKTI	GATC	4 cut(s)	582, 876, 899, 1175
BstMAI	GTCTC	2 cut(s)	1018, 1482
BstMBI	GATC	4 cut(s)	579, 873, 896, 1172
BstMWI	GCNNNNNNNGC	5 cut(s)	111, 532, 687, 733, 784
BstNI	CCWGG	4 cut(s)	847, 1179, 1482, 1582
BstNSI	RCATGY	4 cut(s)	229, 242, 751, 1305
BstSCI	CCNGG	6 cut(s)	301, 466, 845, 1177, 1480, 1580
BstSFI	CTRYAG	1 cut(s)	1595
BstUI	CGCG	2 cut(s)	16, 26
BstV1I	GCAGC	5 cut(s)	92, 185, 711, 811, 1235
BstV2I	GAAGAC	1 cut(s)	1556
BstX2I	RGATCY	1 cut(s)	873
BstYI	RGATCY	1 cut(s)	873
BstZ17I	GTATAC	1 cut(s)	1280
BsuRI	GGCC	3 cut(s)	74, 97, 681
BtgZI	GCGATG	2 cut(s)	307, 1564
BtsCI	GGATG	4 cut(s)	327, 368, 665, 1318
BtsI	GCAGTG	2 cut(s)	782, 1592
BtsIMutI	CAGTG	2 cut(s)	782, 1592
BveI	ACCTGC	1 cut(s)	432
Cac8I	GCNNGC	5 cut(s)	12, 755, 836, 1008, 1311
CciI	TCATGA	2 cut(s)	707, 1242
CfoI	GCGC	5 cut(s)	16, 310, 526, 753, 1309
Cfr13I	GGNCC	1 cut(s)	68
CpoI	CGGWCCG	1 cut(s)	68
CseI	GACGC	1 cut(s)	204
CsiI	ACCWGGT	1 cut(s)	845
Csp6I	GTAC	1 cut(s)	745
CspI	CGGWCCG	1 cut(s)	68
CviQI	GTAC	1 cut(s)	745
DdeI	CTNAG	7 cut(s)	263, 676, 686, 1013, 1264, 1285, 1386
DpnI	GATC	4 cut(s)	581, 875, 898, 1174
DpnII	GATC	4 cut(s)	579, 873, 896, 1172
DrdI	GACNNNNNNGTC	1 cut(s)	201
DseDI	GACNNNNNNGTC	1 cut(s)	201
EaeI	YGGCCR	1 cut(s)	95
Eam1104I	CTCTTC	4 cut(s)	474, 621, 629, 860
EarI	CTCTTC	4 cut(s)	474, 621, 629, 860
Ecl136II	GAGCTC	1 cut(s)	713
Eco147I	AGGCCT	1 cut(s)	681
Eco24I	GRGCYC	1 cut(s)	715
Eco31I	GGTCTC	1 cut(s)	1018
Eco32I	GATATC	2 cut(s)	1155, 1496
Eco47I	GGWCC	1 cut(s)	68
Eco53kI	GAGCTC	1 cut(s)	713
Eco72I	CACGTG	1 cut(s)	93
EcoICRI	GAGCTC	1 cut(s)	713
EcoRII	CCWGG	4 cut(s)	845, 1177, 1480, 1580
EcoRV	GATATC	2 cut(s)	1155, 1496
EcoT22I	ATGCAT	2 cut(s)	240, 359
EcoT38I	GRGCYC	1 cut(s)	715
FauI	CCCGC	1 cut(s)	1414
FauNDI	CATATG	1 cut(s)	1107
FbaI	TGATCA	2 cut(s)	579, 1172
FblI	GTMKAC	1 cut(s)	1279
Fnu4HI	GCNGC	6 cut(s)	106, 199, 725, 800, 839, 1249
FokI	GGATG	4 cut(s)	334, 375, 672, 1305
FriOI	GRGCYC	1 cut(s)	715
Fsp4HI	GCNGC	6 cut(s)	106, 199, 725, 800, 839, 1249
FspBI	CTAG	3 cut(s)	395, 1112, 1132
FspI	TGCGCA	3 cut(s)	525, 752, 1308
GlaI	GCGC	5 cut(s)	15, 309, 525, 752, 1308
GluI	GCNGC	6 cut(s)	106, 199, 725, 800, 839, 1249
HaeIII	GGCC	3 cut(s)	74, 97, 681
HapII	CCGG	4 cut(s)	66, 71, 302, 467
HgaI	GACGC	1 cut(s)	204
HhaI	GCGC	5 cut(s)	16, 310, 526, 753, 1309
Hin6I	GCGC	5 cut(s)	14, 308, 524, 751, 1307
HinP1I	GCGC	5 cut(s)	14, 308, 524, 751, 1307
HindIII	AAGCTT	1 cut(s)	776
HinfI	GANTC	5 cut(s)	421, 928, 1038, 1128, 1199
HpaII	CCGG	4 cut(s)	66, 71, 302, 467
HphI	GGTGA	1 cut(s)	1167
Hpy166II	GTNNAC	5 cut(s)	191, 231, 495, 986, 1280
Hpy188I	TCNGA	7 cut(s)	266, 584, 857, 1014, 1124, 1142, 1260
Hpy188III	TCNNGA	5 cut(s)	708, 900, 1196, 1243, 1270
Hpy8I	GTNNAC	5 cut(s)	191, 231, 495, 986, 1280
Hpy99I	CGWCG	1 cut(s)	198
HpyAV	CCTTC	5 cut(s)	261, 864, 958, 1219, 1599
HpyCH4III	ACNGT	2 cut(s)	925, 1382
HpyCH4IV	ACGT	3 cut(s)	92, 179, 717
HpyF10VI	GCNNNNNNNGC	5 cut(s)	111, 532, 687, 733, 784
HpyF3I	CTNAG	7 cut(s)	263, 676, 686, 1013, 1264, 1285, 1386
HpySE526I	ACGT	3 cut(s)	92, 179, 717
HspAI	GCGC	5 cut(s)	14, 308, 524, 751, 1307
Ksp22I	TGATCA	2 cut(s)	579, 1172
Kzo9I	GATC	4 cut(s)	579, 873, 896, 1172
LguI	GCTCTTC	1 cut(s)	474
Lsp1109I	GCAGC	5 cut(s)	92, 185, 711, 811, 1235
LweI	GCATC	2 cut(s)	650, 1541
MabI	ACCWGGT	1 cut(s)	845
MaeI	CTAG	3 cut(s)	395, 1112, 1132
MaeII	ACGT	3 cut(s)	92, 179, 717
MaeIII	GTNAC	2 cut(s)	3, 20
MalI	GATC	4 cut(s)	581, 875, 898, 1174
MboI	GATC	4 cut(s)	579, 873, 896, 1172
MboII	GAAGA	8 cut(s)	142, 491, 568, 577, 638, 646, 877, 1556
MflI	RGATCY	1 cut(s)	873
MhlI	GDGCHC	1 cut(s)	715
MlsI	TGGCCA	1 cut(s)	97
MluCI	AATT	7 cut(s)	217, 381, 803, 1167, 1237, 1292, 1360
MluNI	TGGCCA	1 cut(s)	97
MlyI	GAGTC	1 cut(s)	430
Mox20I	TGGCCA	1 cut(s)	97
Mph1103I	ATGCAT	2 cut(s)	240, 359
MroXI	GAANNNNTTC	1 cut(s)	483
MscI	TGGCCA	1 cut(s)	97
MseI	TTAA	6 cut(s)	215, 371, 518, 593, 761, 1073
MslI	CAYNNNNRTG	5 cut(s)	746, 787, 1033, 1058, 1405
Msp20I	TGGCCA	1 cut(s)	97
MspA1I	CMGCKG	2 cut(s)	105, 724
MspI	CCGG	4 cut(s)	66, 71, 302, 467
MspR9I	CCNGG	6 cut(s)	303, 468, 847, 1179, 1482, 1582
Mva1269I	GAATGC	6 cut(s)	144, 294, 894, 1095, 1188, 1491
MvaI	CCWGG	4 cut(s)	847, 1179, 1482, 1582
MvnI	CGCG	2 cut(s)	16, 26
MwoI	GCNNNNNNNGC	5 cut(s)	111, 532, 687, 733, 784
NciI	CCSGG	2 cut(s)	303, 468
NdeI	CATATG	1 cut(s)	1107
NdeII	GATC	4 cut(s)	579, 873, 896, 1172
NlaIV	GGNNCC	1 cut(s)	42
NmeAIII	GCCGAG	1 cut(s)	336
NmuCI	GTSAC	1 cut(s)	3
NsbI	TGCGCA	3 cut(s)	525, 752, 1308
NsiI	ATGCAT	2 cut(s)	240, 359
NspI	RCATGY	4 cut(s)	229, 242, 751, 1305
OliI	CACNNNNGTG	1 cut(s)	787
PagI	TCATGA	2 cut(s)	707, 1242
PaqCI	CACCTGC	1 cut(s)	432
PceI	AGGCCT	1 cut(s)	681
PciSI	GCTCTTC	1 cut(s)	474
PcsI	WCGNNNNNNNCGW	2 cut(s)	59, 118
PctI	GAATGC	6 cut(s)	144, 294, 894, 1095, 1188, 1491
PdmI	GAANNNNTTC	1 cut(s)	483
PfeI	GAWTC	4 cut(s)	928, 1038, 1128, 1199
PfoI	TCCNGGA	1 cut(s)	1480
PkrI	GCNGC	6 cut(s)	107, 200, 726, 801, 840, 1250
PleI	GAGTC	1 cut(s)	429
PmaCI	CACGTG	1 cut(s)	93
PmlI	CACGTG	1 cut(s)	93
PpsI	GAGTC	1 cut(s)	429
Ppu21I	YACGTR	1 cut(s)	93
Psp124BI	GAGCTC	1 cut(s)	715
Psp6I	CCWGG	4 cut(s)	845, 1177, 1480, 1580
PspCI	CACGTG	1 cut(s)	93
PspGI	CCWGG	4 cut(s)	845, 1177, 1480, 1580
PspN4I	GGNNCC	1 cut(s)	42
PspPI	GGNCC	1 cut(s)	68
PstI	CTGCAG	1 cut(s)	1599
PsuI	RGATCY	1 cut(s)	873
PvuII	CAGCTG	1 cut(s)	724
RsaI	GTAC	1 cut(s)	746
RsaNI	GTAC	1 cut(s)	745
RseI	CAYNNNNRTG	5 cut(s)	746, 787, 1033, 1058, 1405
Rsr2I	CGGWCCG	1 cut(s)	68
RsrII	CGGWCCG	1 cut(s)	68
SacI	GAGCTC	1 cut(s)	715
SapI	GCTCTTC	1 cut(s)	474
SaqAI	TTAA	6 cut(s)	215, 371, 518, 593, 761, 1073
SatI	GCNGC	6 cut(s)	106, 199, 725, 800, 839, 1249
Sau3AI	GATC	4 cut(s)	579, 873, 896, 1172
Sau96I	GGNCC	1 cut(s)	68
SchI	GAGTC	1 cut(s)	430
ScrFI	CCNGG	6 cut(s)	303, 468, 847, 1179, 1482, 1582
SduI	GDGCHC	1 cut(s)	715
SexAI	ACCWGGT	1 cut(s)	845
SfaNI	GCATC	2 cut(s)	650, 1541
SfcI	CTRYAG	1 cut(s)	1595
SinI	GGWCC	1 cut(s)	68
SmiMI	CAYNNNNRTG	5 cut(s)	746, 787, 1033, 1058, 1405
SmlI	CTYRAG	2 cut(s)	911, 1323
SmoI	CTYRAG	2 cut(s)	911, 1323
Sse9I	AATT	7 cut(s)	217, 381, 803, 1167, 1237, 1292, 1360
SseBI	AGGCCT	1 cut(s)	681
SsiI	CCGC	6 cut(s)	8, 103, 127, 535, 838, 1421
SspMI	CTAG	3 cut(s)	395, 1112, 1132
SstI	GAGCTC	1 cut(s)	715
StuI	AGGCCT	1 cut(s)	681
StyD4I	CCNGG	6 cut(s)	301, 466, 845, 1177, 1480, 1580
TaaI	ACNGT	2 cut(s)	925, 1382
TaiI	ACGT	3 cut(s)	95, 182, 720
TaqI	TCGA	2 cut(s)	251, 901
TasI	AATT	7 cut(s)	217, 381, 803, 1167, 1237, 1292, 1360
TatI	WGTACW	1 cut(s)	744
TauI	GCSGC	1 cut(s)	841
TfiI	GAWTC	4 cut(s)	928, 1038, 1128, 1199
Tru1I	TTAA	6 cut(s)	215, 371, 518, 593, 761, 1073
Tru9I	TTAA	6 cut(s)	215, 371, 518, 593, 761, 1073
TscAI	CASTG	2 cut(s)	789, 1599
TseFI	GTSAC	1 cut(s)	3
TseI	GCWGC	5 cut(s)	105, 198, 724, 799, 1248
Tsp45I	GTSAC	1 cut(s)	3
TspDTI	ATGAA	7 cut(s)	647, 1141, 1231, 1238, 1333, 1474, 1478
TspGWI	ACGGA	1 cut(s)	1226
TspRI	CASTG	2 cut(s)	789, 1599
VpaK11BI	GGWCC	1 cut(s)	68
XapI	RAATTY	2 cut(s)	1167, 1360
XceI	RCATGY	4 cut(s)	229, 242, 751, 1305
XmiI	GTMKAC	1 cut(s)	1279
XmnI	GAANNNNTTC	1 cut(s)	483
XspI	CTAG	3 cut(s)	395, 1112, 1132
Zsp2I	ATGCAT	2 cut(s)	240, 359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.