Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014080.1

Orthogroup ID

OG0016025

Physical Location & Seq

Genomic Coordinates Forward (+)

5513 .. 7302

Gene Structure 1790 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014080.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1790 bp

atgaagttcaacttctgcagagaagccttaacaactataactgaatccgccgctgaaatcttcaaggtgaaccagaggcttgttaagcttaatcgctcgcattgttacgcagagacactccagcttttcacccaaatccattcatccgagtcacttagaccagaccactacacggtctcggcggccgtcaccgcctgcgcgaagttacgcgacattgttttcggcacccaacttcacggcaacgccgtccggtccggcctcaaagcctttcctcacgtggccaatccgctgctctcgctttatgcgaaagcggaagatttgaatgctgtgagatgggtgtttgatgagattgcagacccagatgtttattcgtggacgacgctgctgtcggcttgtgttaaattggggcatgtggactatgcatgtgaggtgttcgataaaatgcctcagaagggtaatgtggcgatttggaatgcgatgattaccgggtgcgccgagaatggggatgaggaggttgcttttagtttgttttgtgaaatgcataggatgggtgttaagcatgataattttagtgttgctagtgtgttgagtttgtgttgtttggagtctgtgggatttgggaggcaggtgcattgtttagtgattagaaccgggtttttaggaagagcttctgttgtgaacgctctgcttactatgtattttaactgcgcaagtgttgcggaggcatttgaggtgtttgaagaagcagaagatggggtgtatgatcagattacttttaatgtgatgattgatggtttggtgggtgtgggaagagatgaagaggctttgacaatgttcaaagggatgcaagaggcgtgtcttaggcctactgagctgacttttgtgagtgtcatgagctcacgttcagctgcaagagttgctaaccatgtacatgcgcaggcgattaagttgggttttgaagctttcactgctgtgggcaatgcagcaattaccatgttttctggttgtggggattggcaagcggcttacctggtttttcagacattggaagagaaggatcttatatcatggaatgccatgatctcgacttatgctcaagtgaatgaccgtgaatcagccgttttggtctatctgcaaatgcagagggaaggagagaaaccagatgagtttacttatggaagtttgttggcaagctctgagtatattgagaccatgcaaatgattcaggctgttgcacacaaaaatgggcttatccttaaaatccaagttttgaatgcaatggtttctgcatatgctaggcagggtcagatgaatctagcccatcagacattccaagatatcaaatgcaaaaatttgatcacctggaatgctattatttctggattcctgttgaacggaatggtaaatgaagggttagagcaatttcatgagctgcttgtgtcagaactcagtccagatgtgtataccctgagtataattgtaagcatgtgcgcaagcataacatccttgagagatggaaaaccagttcatgcctacattctcaaatttgggttttctcaacaactgtgcttaggtaatgccctcattacgatgtattctaaatgcggggttttagattgctcggtaagagtgtttgaagcaatgaatgaaaaggatatagtctcctggaatgccctgatatcagcttatgcacaacatgggaaaggaaaggaagctgttgattgttttgaggcgatgcaagacttgtcttccatcacaccagaccaggcaaccttcactgcagttctttc

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

597

Amino Acids

65.97

Weight (kDa)

5.22

Isoelectric Point (pI)

31.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49740
fragaria_vesca	FvH4_1g18310
malus_domestica	MD02G1190400.v1.1
prunus_persica	Prupe.6G216000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0108961
rosa_laevigata	RLG00000017696
rosa_multiflora	Rmu_sc0014080.1_g000004 Rmu_sc0038162.1_g000001
rosa_roxburghii	Rroxscaffold_2G00134680
rosa_rugosa	Rorug02G0156700
rosa_samantha	Rh2AG207300 Rh2BG218500 Rh2CG210500 Rh2DG213500
rosa_wichuraiana	Rw0G011000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	616
AasI	GACNNNNNNGTC	1 cut(s)	385
Acc16I	TGCGCA	3 cut(s)	709, 936, 1492
Acc36I	ACCTGC	1 cut(s)	616
AccB1I	GGYRCC	1 cut(s)	224
AccI	GTMKAC	1 cut(s)	1463
AccII	CGCG	2 cut(s)	200, 210
AciI	CCGC	9 cut(s)	48, 51, 182, 192, 287, 311, 719, 1022, 1605
AclWI	GGATC	1 cut(s)	1065
AcoI	YGGCCR	2 cut(s)	183, 279
AcsI	RAATTY	2 cut(s)	1351, 1544
AcvI	CACGTG	1 cut(s)	277
AfaI	GTAC	1 cut(s)	930
AfiI	CCNNNNNNNGG	3 cut(s)	172, 452, 501
AgsI	TTSAA	9 cut(s)	10, 64, 322, 740, 838, 959, 1273, 1393, 1637
AjnI	CCWGG	4 cut(s)	1029, 1361, 1664, 1764
AleI	CACNNNNGTG	1 cut(s)	971
AloI	GAACNNNNNNTCC	2 cut(s)	1509, 1541
Alw21I	GWGCWC	1 cut(s)	899
Alw26I	GTCTC	4 cut(s)	107, 181, 1202, 1666
AlwI	GGATC	1 cut(s)	1065
AoxI	GGCC	4 cut(s)	183, 256, 279, 863
ApeKI	GCWGC	5 cut(s)	289, 382, 908, 983, 1432
ApoI	RAATTY	2 cut(s)	1351, 1544
ArsI	GACNNNNNNTTYG	2 cut(s)	203, 235
Asp700I	GAANNNNTTC	1 cut(s)	667
AspLEI	GCGC	5 cut(s)	200, 494, 710, 937, 1493
AspS9I	GGNCC	1 cut(s)	252
AsuC2I	CCSGG	2 cut(s)	487, 652
AsuHPI	GGTGA	4 cut(s)	79, 121, 181, 1351
AvaII	GGWCC	1 cut(s)	252
BalI	TGGCCA	1 cut(s)	281
BanI	GGYRCC	1 cut(s)	224
BanII	GRGCYC	1 cut(s)	899
BbrPI	CACGTG	1 cut(s)	277
BbsI	GAAGAC	1 cut(s)	1740
Bbv12I	GWGCWC	1 cut(s)	899
BbvI	GCAGC	5 cut(s)	276, 369, 895, 995, 1419
BccI	CCATC	7 cut(s)	327, 541, 746, 785, 1329, 1508, 1760
BceAI	ACGGC	4 cut(s)	170, 230, 253, 1103
BciT130I	CCWGG	4 cut(s)	1031, 1363, 1666, 1766
BclI	TGATCA	2 cut(s)	763, 1356
BcnI	CCSGG	2 cut(s)	487, 652
BcoDI	GTCTC	4 cut(s)	107, 181, 1202, 1666
BfaI	CTAG	3 cut(s)	579, 1296, 1316
BfmI	CTRYAG	2 cut(s)	16, 1779
BfuAI	ACCTGC	1 cut(s)	616
BisI	GCNGC	8 cut(s)	51, 183, 290, 383, 909, 984, 1023, 1433
BlsI	GCNGC	8 cut(s)	52, 184, 291, 384, 910, 985, 1024, 1434
Bme1390I	CCNGG	6 cut(s)	487, 652, 1031, 1363, 1666, 1766
Bme18I	GGWCC	1 cut(s)	252
BmgT120I	GGNCC	1 cut(s)	252
BmiI	GGNNCC	1 cut(s)	226
BmrFI	CCNGG	6 cut(s)	487, 652, 1031, 1363, 1666, 1766
BmsI	GCATC	2 cut(s)	834, 1725
BpiI	GAAGAC	1 cut(s)	1740
BpmI	CTGGAG	1 cut(s)	104
Bpu10I	CCTNAGC	1 cut(s)	1570
BpuEI	CTTGAG	2 cut(s)	1080, 1528
BpuMI	CCSGG	2 cut(s)	487, 652
BsaAI	YACGTR	1 cut(s)	277
BsaI	GGTCTC	2 cut(s)	181, 1202
BsaWI	WCCGGW	1 cut(s)	249
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 452, 501
Bse1I	ACTGG	1 cut(s)	1523
Bse3DI	GCAATG	3 cut(s)	985, 1284, 1647
BseBI	CCWGG	4 cut(s)	1031, 1363, 1666, 1766
BseGI	GGATG	5 cut(s)	143, 511, 552, 849, 1502
BseLI	CCNNNNNNNGG	3 cut(s)	172, 452, 501
BseMI	GCAATG	3 cut(s)	985, 1284, 1647
BseMII	CTCAG	5 cut(s)	461, 861, 1188, 1460, 1462
BseNI	ACTGG	1 cut(s)	1523
BseRI	GAGGAG	1 cut(s)	524
BseX3I	CGGCCG	1 cut(s)	183
BseXI	GCAGC	5 cut(s)	276, 369, 895, 995, 1419
Bsh1236I	CGCG	2 cut(s)	200, 210
Bsh1285I	CGRYCG	1 cut(s)	186
BshFI	GGCC	4 cut(s)	185, 258, 281, 865
BshNI	GGYRCC	1 cut(s)	224
BsiEI	CGRYCG	1 cut(s)	186
BsiHKAI	GWGCWC	1 cut(s)	899
BsiSI	CCGG	4 cut(s)	250, 255, 486, 651
BslI	CCNNNNNNNGG	3 cut(s)	172, 452, 501
BsmAI	GTCTC	4 cut(s)	107, 181, 1202, 1666
BsmI	GAATGC	6 cut(s)	328, 478, 1078, 1279, 1372, 1675
BsnI	GGCC	4 cut(s)	185, 258, 281, 865
Bso31I	GGTCTC	2 cut(s)	181, 1202
Bsp1286I	GDGCHC	1 cut(s)	899
Bsp1407I	TGTACA	1 cut(s)	928
Bsp143I	GATC	4 cut(s)	763, 1057, 1080, 1356
BspACI	CCGC	9 cut(s)	48, 51, 182, 192, 287, 311, 719, 1022, 1605
BspANI	GGCC	4 cut(s)	185, 258, 281, 865
BspCNI	CTCAG	5 cut(s)	460, 862, 1189, 1461, 1461
BspFNI	CGCG	2 cut(s)	200, 210
BspHI	TCATGA	2 cut(s)	891, 1426
BspLI	GGNNCC	1 cut(s)	226
BspMAI	CTGCAG	2 cut(s)	20, 1783
BspMI	ACCTGC	1 cut(s)	616
BspPI	GGATC	1 cut(s)	1065
BspQI	GCTCTTC	1 cut(s)	658
BspT107I	GGYRCC	1 cut(s)	224
BspTNI	GGTCTC	2 cut(s)	181, 1202
BsrDI	GCAATG	3 cut(s)	985, 1284, 1647
BsrGI	TGTACA	1 cut(s)	928
BsrI	ACTGG	1 cut(s)	1523
BssMI	GATC	4 cut(s)	763, 1057, 1080, 1356
BssNAI	GTATAC	1 cut(s)	1464
Bst1107I	GTATAC	1 cut(s)	1464
Bst2UI	CCWGG	4 cut(s)	1031, 1363, 1666, 1766
Bst4CI	ACNGT	3 cut(s)	175, 1109, 1566
Bst6I	CTCTTC	4 cut(s)	658, 805, 813, 1044
BstAPI	GCANNNNNTGC	2 cut(s)	716, 917
BstAUI	TGTACA	1 cut(s)	928
BstBAI	YACGTR	1 cut(s)	277
BstC8I	GCNNGC	6 cut(s)	98, 196, 939, 1020, 1192, 1495
BstDEI	CTNAG	8 cut(s)	155, 447, 860, 870, 1197, 1448, 1469, 1570
BstF5I	GGATG	5 cut(s)	143, 511, 552, 849, 1502
BstFNI	CGCG	2 cut(s)	200, 210
BstHHI	GCGC	5 cut(s)	200, 494, 710, 937, 1493
BstKTI	GATC	4 cut(s)	766, 1060, 1083, 1359
BstMAI	GTCTC	4 cut(s)	107, 181, 1202, 1666
BstMBI	GATC	4 cut(s)	763, 1057, 1080, 1356
BstMCI	CGRYCG	1 cut(s)	186
BstMWI	GCNNNNNNNGC	7 cut(s)	85, 191, 295, 716, 871, 917, 968
BstNI	CCWGG	4 cut(s)	1031, 1363, 1666, 1766
BstNSI	RCATGY	4 cut(s)	413, 426, 935, 1489
BstSCI	CCNGG	6 cut(s)	485, 650, 1029, 1361, 1664, 1764
BstSFI	CTRYAG	2 cut(s)	16, 1779
BstUI	CGCG	2 cut(s)	200, 210
BstV1I	GCAGC	5 cut(s)	276, 369, 895, 995, 1419
BstV2I	GAAGAC	1 cut(s)	1740
BstX2I	RGATCY	1 cut(s)	1057
BstYI	RGATCY	1 cut(s)	1057
BstZ17I	GTATAC	1 cut(s)	1464
BstZI	CGGCCG	1 cut(s)	183
BsuRI	GGCC	4 cut(s)	185, 258, 281, 865
BtgZI	GCGATG	2 cut(s)	491, 1748
BtsCI	GGATG	5 cut(s)	143, 511, 552, 849, 1502
BtsI	GCAGTG	2 cut(s)	966, 1776
BtsIMutI	CAGTG	2 cut(s)	966, 1776
BveI	ACCTGC	1 cut(s)	616
Cac8I	GCNNGC	6 cut(s)	98, 196, 939, 1020, 1192, 1495
CciI	TCATGA	2 cut(s)	891, 1426
CfoI	GCGC	5 cut(s)	200, 494, 710, 937, 1493
Cfr13I	GGNCC	1 cut(s)	252
CpoI	CGGWCCG	1 cut(s)	252
CseI	GACGC	1 cut(s)	388
CsiI	ACCWGGT	1 cut(s)	1029
Csp6I	GTAC	1 cut(s)	929
CspI	CGGWCCG	1 cut(s)	252
CviQI	GTAC	1 cut(s)	929
DdeI	CTNAG	8 cut(s)	155, 447, 860, 870, 1197, 1448, 1469, 1570
DpnI	GATC	4 cut(s)	765, 1059, 1082, 1358
DpnII	GATC	4 cut(s)	763, 1057, 1080, 1356
DrdI	GACNNNNNNGTC	1 cut(s)	385
DseDI	GACNNNNNNGTC	1 cut(s)	385
EaeI	YGGCCR	2 cut(s)	183, 279
EagI	CGGCCG	1 cut(s)	183
Eam1104I	CTCTTC	4 cut(s)	658, 805, 813, 1044
EarI	CTCTTC	4 cut(s)	658, 805, 813, 1044
EciI	GGCGGA	1 cut(s)	37
Ecl136II	GAGCTC	1 cut(s)	897
EclXI	CGGCCG	1 cut(s)	183
Eco147I	AGGCCT	1 cut(s)	865
Eco24I	GRGCYC	1 cut(s)	899
Eco31I	GGTCTC	2 cut(s)	181, 1202
Eco32I	GATATC	2 cut(s)	1339, 1680
Eco47I	GGWCC	1 cut(s)	252
Eco52I	CGGCCG	1 cut(s)	183
Eco53kI	GAGCTC	1 cut(s)	897
Eco72I	CACGTG	1 cut(s)	277
EcoICRI	GAGCTC	1 cut(s)	897
EcoRII	CCWGG	4 cut(s)	1029, 1361, 1664, 1764
EcoRV	GATATC	2 cut(s)	1339, 1680
EcoT22I	ATGCAT	2 cut(s)	424, 543
EcoT38I	GRGCYC	1 cut(s)	899
FalI	AAGNNNNNCTT	1 cut(s)	28
FauI	CCCGC	1 cut(s)	1598
FauNDI	CATATG	1 cut(s)	1291
FbaI	TGATCA	2 cut(s)	763, 1356
FblI	GTMKAC	1 cut(s)	1463
Fnu4HI	GCNGC	8 cut(s)	51, 183, 290, 383, 909, 984, 1023, 1433
FokI	GGATG	5 cut(s)	130, 518, 559, 856, 1489
FriOI	GRGCYC	1 cut(s)	899
Fsp4HI	GCNGC	8 cut(s)	51, 183, 290, 383, 909, 984, 1023, 1433
FspBI	CTAG	3 cut(s)	579, 1296, 1316
FspI	TGCGCA	3 cut(s)	709, 936, 1492
GlaI	GCGC	5 cut(s)	199, 493, 709, 936, 1492
GluI	GCNGC	8 cut(s)	51, 183, 290, 383, 909, 984, 1023, 1433
GsuI	CTGGAG	1 cut(s)	104
HaeIII	GGCC	4 cut(s)	185, 258, 281, 865
HapII	CCGG	4 cut(s)	250, 255, 486, 651
HgaI	GACGC	1 cut(s)	388
HhaI	GCGC	5 cut(s)	200, 494, 710, 937, 1493
Hin6I	GCGC	5 cut(s)	198, 492, 708, 935, 1491
HinP1I	GCGC	5 cut(s)	198, 492, 708, 935, 1491
HindIII	AAGCTT	2 cut(s)	86, 960
HinfI	GANTC	7 cut(s)	44, 149, 605, 1112, 1222, 1312, 1383
HpaII	CCGG	4 cut(s)	250, 255, 486, 651
HphI	GGTGA	4 cut(s)	79, 121, 181, 1351
Hpy166II	GTNNAC	6 cut(s)	70, 375, 415, 679, 1170, 1464
Hpy188I	TCNGA	8 cut(s)	148, 450, 768, 1041, 1198, 1308, 1326, 1444
Hpy188III	TCNNGA	5 cut(s)	892, 1084, 1380, 1427, 1454
Hpy8I	GTNNAC	6 cut(s)	70, 375, 415, 679, 1170, 1464
Hpy99I	CGWCG	1 cut(s)	382
HpyAV	CCTTC	5 cut(s)	445, 1048, 1142, 1403, 1783
HpyCH4III	ACNGT	3 cut(s)	175, 1109, 1566
HpyCH4IV	ACGT	2 cut(s)	276, 901
HpyF10VI	GCNNNNNNNGC	7 cut(s)	85, 191, 295, 716, 871, 917, 968
HpyF3I	CTNAG	8 cut(s)	155, 447, 860, 870, 1197, 1448, 1469, 1570
HpySE526I	ACGT	2 cut(s)	276, 901
HspAI	GCGC	5 cut(s)	198, 492, 708, 935, 1491
Ksp22I	TGATCA	2 cut(s)	763, 1356
Kzo9I	GATC	4 cut(s)	763, 1057, 1080, 1356
LguI	GCTCTTC	1 cut(s)	658
Lsp1109I	GCAGC	5 cut(s)	276, 369, 895, 995, 1419
LweI	GCATC	2 cut(s)	834, 1725
MabI	ACCWGGT	1 cut(s)	1029
MaeI	CTAG	3 cut(s)	579, 1296, 1316
MaeII	ACGT	2 cut(s)	276, 901
MaeIII	GTNAC	4 cut(s)	104, 150, 187, 204
MalI	GATC	4 cut(s)	765, 1059, 1082, 1358
MboI	GATC	4 cut(s)	763, 1057, 1080, 1356
MboII	GAAGA	9 cut(s)	52, 326, 675, 752, 761, 822, 830, 1061, 1740
MflI	RGATCY	1 cut(s)	1057
MhlI	GDGCHC	1 cut(s)	899
MlsI	TGGCCA	1 cut(s)	281
MluCI	AATT	7 cut(s)	401, 565, 987, 1351, 1421, 1476, 1544
MluNI	TGGCCA	1 cut(s)	281
MlyI	GAGTC	2 cut(s)	158, 614
Mox20I	TGGCCA	1 cut(s)	281
Mph1103I	ATGCAT	2 cut(s)	424, 543
MroXI	GAANNNNTTC	1 cut(s)	667
MscI	TGGCCA	1 cut(s)	281
MseI	TTAA	9 cut(s)	29, 84, 90, 399, 555, 702, 777, 945, 1257
MslI	CAYNNNNRTG	5 cut(s)	930, 971, 1217, 1242, 1589
Msp20I	TGGCCA	1 cut(s)	281
MspA1I	CMGCKG	3 cut(s)	53, 289, 908
MspI	CCGG	4 cut(s)	250, 255, 486, 651
MspR9I	CCNGG	6 cut(s)	487, 652, 1031, 1363, 1666, 1766
Mva1269I	GAATGC	6 cut(s)	328, 478, 1078, 1279, 1372, 1675
MvaI	CCWGG	4 cut(s)	1031, 1363, 1666, 1766
MvnI	CGCG	2 cut(s)	200, 210
MwoI	GCNNNNNNNGC	7 cut(s)	85, 191, 295, 716, 871, 917, 968
NciI	CCSGG	2 cut(s)	487, 652
NdeI	CATATG	1 cut(s)	1291
NdeII	GATC	4 cut(s)	763, 1057, 1080, 1356
NlaIV	GGNNCC	1 cut(s)	226
NmeAIII	GCCGAG	2 cut(s)	158, 520
NmuCI	GTSAC	2 cut(s)	150, 187
NsbI	TGCGCA	3 cut(s)	709, 936, 1492
NsiI	ATGCAT	2 cut(s)	424, 543
NspI	RCATGY	4 cut(s)	413, 426, 935, 1489
OliI	CACNNNNGTG	1 cut(s)	971
PagI	TCATGA	2 cut(s)	891, 1426
PaqCI	CACCTGC	1 cut(s)	616
PceI	AGGCCT	1 cut(s)	865
PciSI	GCTCTTC	1 cut(s)	658
PcsI	WCGNNNNNNNCGW	2 cut(s)	243, 302
PctI	GAATGC	6 cut(s)	328, 478, 1078, 1279, 1372, 1675
PdmI	GAANNNNTTC	1 cut(s)	667
PfeI	GAWTC	5 cut(s)	44, 1112, 1222, 1312, 1383
PfoI	TCCNGGA	1 cut(s)	1664
PkrI	GCNGC	8 cut(s)	52, 184, 291, 384, 910, 985, 1024, 1434
PleI	GAGTC	2 cut(s)	157, 613
PmaCI	CACGTG	1 cut(s)	277
PmlI	CACGTG	1 cut(s)	277
PpsI	GAGTC	2 cut(s)	157, 613
Ppu21I	YACGTR	1 cut(s)	277
Psp124BI	GAGCTC	1 cut(s)	899
Psp6I	CCWGG	4 cut(s)	1029, 1361, 1664, 1764
PspCI	CACGTG	1 cut(s)	277
PspGI	CCWGG	4 cut(s)	1029, 1361, 1664, 1764
PspN4I	GGNNCC	1 cut(s)	226
PspPI	GGNCC	1 cut(s)	252
PstI	CTGCAG	2 cut(s)	20, 1783
PsuI	RGATCY	1 cut(s)	1057
PvuII	CAGCTG	1 cut(s)	908
RsaI	GTAC	1 cut(s)	930
RsaNI	GTAC	1 cut(s)	929
RseI	CAYNNNNRTG	5 cut(s)	930, 971, 1217, 1242, 1589
Rsr2I	CGGWCCG	1 cut(s)	252
RsrII	CGGWCCG	1 cut(s)	252
SacI	GAGCTC	1 cut(s)	899
SapI	GCTCTTC	1 cut(s)	658
SaqAI	TTAA	9 cut(s)	29, 84, 90, 399, 555, 702, 777, 945, 1257
SatI	GCNGC	8 cut(s)	51, 183, 290, 383, 909, 984, 1023, 1433
Sau3AI	GATC	4 cut(s)	763, 1057, 1080, 1356
Sau96I	GGNCC	1 cut(s)	252
SchI	GAGTC	2 cut(s)	158, 614
ScrFI	CCNGG	6 cut(s)	487, 652, 1031, 1363, 1666, 1766
SduI	GDGCHC	1 cut(s)	899
SexAI	ACCWGGT	1 cut(s)	1029
SfaNI	GCATC	2 cut(s)	834, 1725
SfcI	CTRYAG	2 cut(s)	16, 1779
SinI	GGWCC	1 cut(s)	252
SmiMI	CAYNNNNRTG	5 cut(s)	930, 971, 1217, 1242, 1589
SmlI	CTYRAG	2 cut(s)	1095, 1507
SmoI	CTYRAG	2 cut(s)	1095, 1507
Sse9I	AATT	7 cut(s)	401, 565, 987, 1351, 1421, 1476, 1544
SseBI	AGGCCT	1 cut(s)	865
SsiI	CCGC	9 cut(s)	48, 51, 182, 192, 287, 311, 719, 1022, 1605
SspMI	CTAG	3 cut(s)	579, 1296, 1316
SstI	GAGCTC	1 cut(s)	899
StuI	AGGCCT	1 cut(s)	865
StyD4I	CCNGG	6 cut(s)	485, 650, 1029, 1361, 1664, 1764
TaaI	ACNGT	3 cut(s)	175, 1109, 1566
TaiI	ACGT	2 cut(s)	279, 904
TaqI	TCGA	2 cut(s)	435, 1085
TasI	AATT	7 cut(s)	401, 565, 987, 1351, 1421, 1476, 1544
TatI	WGTACW	1 cut(s)	928
TauI	GCSGC	3 cut(s)	53, 185, 1025
TfiI	GAWTC	5 cut(s)	44, 1112, 1222, 1312, 1383
Tru1I	TTAA	9 cut(s)	29, 84, 90, 399, 555, 702, 777, 945, 1257
Tru9I	TTAA	9 cut(s)	29, 84, 90, 399, 555, 702, 777, 945, 1257
TscAI	CASTG	2 cut(s)	973, 1783
TseFI	GTSAC	2 cut(s)	150, 187
TseI	GCWGC	5 cut(s)	289, 382, 908, 983, 1432
Tsp45I	GTSAC	2 cut(s)	150, 187
TspDTI	ATGAA	9 cut(s)	17, 132, 831, 1325, 1415, 1422, 1517, 1658, 1662
TspGWI	ACGGA	1 cut(s)	1410
TspRI	CASTG	2 cut(s)	973, 1783
VpaK11BI	GGWCC	1 cut(s)	252
XapI	RAATTY	2 cut(s)	1351, 1544
XceI	RCATGY	4 cut(s)	413, 426, 935, 1489
XmiI	GTMKAC	1 cut(s)	1463
XmnI	GAANNNNTTC	1 cut(s)	667
XspI	CTAG	3 cut(s)	579, 1296, 1316
Zsp2I	ATGCAT	2 cut(s)	424, 543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.