Ring finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51325 |
| fragaria_vesca | FvH4_1g11280 |
| malus_domestica | MD02G1125300.v1.1 MD15G1241000.v1.1 |
| prunus_persica | Prupe.7G173200_v2.0.a1 |
| pyrus_communis | pycom15g21250 |
| rosa_chinensis | RchiOBHm_Chr2g0098751 |
| rosa_laevigata | RLG00000016825 |
| rosa_roxburghii | Rroxscaffold_2G00143740 |
| rosa_rugosa | Rorug02G0074600 |
| rosa_samantha | Rh2AG122200 Rh2BG125900 Rh2CG126800 Rh2DG127900 |
| rosa_wichuraiana | Rw0G004230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 35 |
| AgsI | TTSAA | 1 cut(s) | 172 |
| Alw26I | GTCTC | 2 cut(s) | 126, 155 |
| Ama87I | CYCGRG | 1 cut(s) | 37 |
| AoxI | GGCC | 1 cut(s) | 24 |
| AsuHPI | GGTGA | 1 cut(s) | 204 |
| AvaI | CYCGRG | 1 cut(s) | 37 |
| BccI | CCATC | 1 cut(s) | 230 |
| BceAI | ACGGC | 2 cut(s) | 165, 189 |
| BcoDI | GTCTC | 2 cut(s) | 126, 155 |
| BmeT110I | CYCGRG | 1 cut(s) | 37 |
| BpmI | CTGGAG | 1 cut(s) | 32 |
| BsaAI | YACGTR | 1 cut(s) | 165 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 5, 35 |
| BseGI | GGATG | 1 cut(s) | 222 |
| BseRI | GAGGAG | 2 cut(s) | 66, 236 |
| BsgI | GTGCAG | 1 cut(s) | 65 |
| BshFI | GGCC | 1 cut(s) | 26 |
| BsiHKCI | CYCGRG | 1 cut(s) | 37 |
| BsmAI | GTCTC | 2 cut(s) | 126, 155 |
| BsnI | GGCC | 1 cut(s) | 26 |
| BsoBI | CYCGRG | 1 cut(s) | 37 |
| BspANI | GGCC | 1 cut(s) | 26 |
| Bst6I | CTCTTC | 2 cut(s) | 55, 63 |
| BstBAI | YACGTR | 1 cut(s) | 165 |
| BstF5I | GGATG | 1 cut(s) | 222 |
| BstMAI | GTCTC | 2 cut(s) | 126, 155 |
| BsuRI | GGCC | 1 cut(s) | 26 |
| BtsCI | GGATG | 1 cut(s) | 222 |
| CseI | GACGC | 1 cut(s) | 145 |
| Csp6I | GTAC | 1 cut(s) | 34 |
| CviAII | CATG | 1 cut(s) | 137 |
| CviJI | RGCY | 2 cut(s) | 26, 180 |
| CviKI_1 | RGCY | 2 cut(s) | 26, 180 |
| CviQI | GTAC | 1 cut(s) | 34 |
| Eam1104I | CTCTTC | 2 cut(s) | 55, 63 |
| EarI | CTCTTC | 2 cut(s) | 55, 63 |
| Eco88I | CYCGRG | 1 cut(s) | 37 |
| FaeI | CATG | 1 cut(s) | 140 |
| FaiI | YATR | 2 cut(s) | 138, 147 |
| FatI | CATG | 1 cut(s) | 136 |
| FokI | GGATG | 1 cut(s) | 209 |
| GsuI | CTGGAG | 1 cut(s) | 32 |
| HaeIII | GGCC | 1 cut(s) | 26 |
| HgaI | GACGC | 1 cut(s) | 145 |
| Hin1II | CATG | 1 cut(s) | 140 |
| HphI | GGTGA | 1 cut(s) | 204 |
| Hpy188I | TCNGA | 1 cut(s) | 272 |
| Hpy188III | TCNNGA | 1 cut(s) | 11 |
| Hpy99I | CGWCG | 1 cut(s) | 161 |
| HpyAV | CCTTC | 2 cut(s) | 50, 236 |
| HpyCH4IV | ACGT | 1 cut(s) | 164 |
| HpyCH4V | TGCA | 1 cut(s) | 46 |
| HpySE526I | ACGT | 1 cut(s) | 164 |
| Hsp92II | CATG | 1 cut(s) | 140 |
| LpnPI | CCDG | 2 cut(s) | 32, 235 |
| MaeII | ACGT | 1 cut(s) | 164 |
| MboII | GAAGA | 3 cut(s) | 72, 80, 249 |
| MnlI | CCTC | 5 cut(s) | 44, 58, 94, 207, 257 |
| NlaIII | CATG | 1 cut(s) | 140 |
| Ppu21I | YACGTR | 1 cut(s) | 165 |
| RsaI | GTAC | 1 cut(s) | 35 |
| RsaNI | GTAC | 1 cut(s) | 34 |
| SetI | ASST | 3 cut(s) | 9, 130, 167 |
| TaiI | ACGT | 1 cut(s) | 167 |
| TaqI | TCGA | 1 cut(s) | 159 |
| TspDTI | ATGAA | 4 cut(s) | 17, 134, 252, 254 |