Ring finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51325 |
| fragaria_vesca | FvH4_1g11280 |
| malus_domestica | MD02G1125300.v1.1 MD15G1241000.v1.1 |
| prunus_persica | Prupe.7G173200_v2.0.a1 |
| pyrus_communis | pycom15g21250 |
| rosa_chinensis | RchiOBHm_Chr2g0098751 |
| rosa_laevigata | RLG00000016825 |
| rosa_roxburghii | Rroxscaffold_2G00143740 |
| rosa_rugosa | Rorug02G0074600 |
| rosa_samantha | Rh2AG122200 Rh2BG125900 Rh2CG126800 Rh2DG127900 |
| rosa_wichuraiana | Rw0G004230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 257 |
| Acc36I | ACCTGC | 1 cut(s) | 257 |
| AciI | CCGC | 2 cut(s) | 47, 254 |
| AcuI | CTGAAG | 1 cut(s) | 25 |
| AdeI | CACNNNGTG | 1 cut(s) | 211 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 53, 268, 275 |
| AgsI | TTSAA | 1 cut(s) | 101 |
| AjiI | CACGTC | 1 cut(s) | 175 |
| Alw26I | GTCTC | 2 cut(s) | 188, 291 |
| ApeKI | GCWGC | 2 cut(s) | 17, 74 |
| AspS9I | GGNCC | 1 cut(s) | 243 |
| AsuHPI | GGTGA | 2 cut(s) | 106, 179 |
| AvaII | GGWCC | 1 cut(s) | 243 |
| BbvI | GCAGC | 2 cut(s) | 29, 86 |
| BceAI | ACGGC | 1 cut(s) | 246 |
| BcoDI | GTCTC | 2 cut(s) | 188, 291 |
| BfuAI | ACCTGC | 1 cut(s) | 257 |
| BisI | GCNGC | 2 cut(s) | 18, 75 |
| BlsI | GCNGC | 2 cut(s) | 19, 76 |
| Bme18I | GGWCC | 1 cut(s) | 243 |
| BmgBI | CACGTC | 1 cut(s) | 175 |
| BmgT120I | GGNCC | 1 cut(s) | 243 |
| BsaWI | WCCGGW | 1 cut(s) | 268 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 305, 335 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 53, 268, 275 |
| BseGI | GGATG | 1 cut(s) | 136 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 53, 268, 275 |
| BseMII | CTCAG | 2 cut(s) | 300, 302 |
| BseRI | GAGGAG | 2 cut(s) | 140, 326 |
| BseXI | GCAGC | 2 cut(s) | 29, 86 |
| BsiSI | CCGG | 2 cut(s) | 241, 269 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 53, 268, 275 |
| BsmAI | GTCTC | 2 cut(s) | 188, 291 |
| BspACI | CCGC | 2 cut(s) | 47, 254 |
| BspCNI | CTCAG | 2 cut(s) | 301, 301 |
| BspMI | ACCTGC | 1 cut(s) | 257 |
| BstC8I | GCNNGC | 3 cut(s) | 194, 238, 254 |
| BstDEI | CTNAG | 2 cut(s) | 288, 309 |
| BstF5I | GGATG | 1 cut(s) | 136 |
| BstMAI | GTCTC | 2 cut(s) | 188, 291 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 55, 258 |
| BstNSI | RCATGY | 1 cut(s) | 240 |
| BstV1I | GCAGC | 2 cut(s) | 29, 86 |
| BtrI | CACGTC | 1 cut(s) | 175 |
| BtsCI | GGATG | 1 cut(s) | 136 |
| BveI | ACCTGC | 1 cut(s) | 257 |
| Cac8I | GCNNGC | 3 cut(s) | 194, 238, 254 |
| Cfr13I | GGNCC | 1 cut(s) | 243 |
| CseI | GACGC | 1 cut(s) | 242 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 141, 176 |
| CviAII | CATG | 3 cut(s) | 81, 197, 237 |
| CviJI | RGCY | 2 cut(s) | 20, 77 |
| CviKI_1 | RGCY | 2 cut(s) | 20, 77 |
| DdeI | CTNAG | 2 cut(s) | 288, 309 |
| DraIII | CACNNNGTG | 1 cut(s) | 211 |
| Eco47I | GGWCC | 1 cut(s) | 243 |
| Eco57I | CTGAAG | 1 cut(s) | 25 |
| FaeI | CATG | 3 cut(s) | 84, 200, 240 |
| FaiI | YATR | 6 cut(s) | 82, 90, 198, 238, 342, 344 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 172, 204 |
| FatI | CATG | 3 cut(s) | 80, 196, 236 |
| FauI | CCCGC | 1 cut(s) | 261 |
| Fnu4HI | GCNGC | 2 cut(s) | 18, 75 |
| FokI | GGATG | 1 cut(s) | 143 |
| Fsp4HI | GCNGC | 2 cut(s) | 18, 75 |
| GluI | GCNGC | 2 cut(s) | 18, 75 |
| HapII | CCGG | 2 cut(s) | 241, 269 |
| HgaI | GACGC | 1 cut(s) | 242 |
| Hin1II | CATG | 3 cut(s) | 84, 200, 240 |
| HinfI | GANTC | 1 cut(s) | 101 |
| HpaII | CCGG | 2 cut(s) | 241, 269 |
| HphI | GGTGA | 2 cut(s) | 106, 179 |
| Hpy188I | TCNGA | 1 cut(s) | 106 |
| Hpy188III | TCNNGA | 1 cut(s) | 153 |
| Hpy99I | CGWCG | 1 cut(s) | 236 |
| HpyAV | CCTTC | 1 cut(s) | 34 |
| HpyCH4IV | ACGT | 1 cut(s) | 174 |
| HpyCH4V | TGCA | 1 cut(s) | 196 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 55, 258 |
| HpyF3I | CTNAG | 2 cut(s) | 288, 309 |
| HpySE526I | ACGT | 1 cut(s) | 174 |
| Hsp92II | CATG | 3 cut(s) | 84, 200, 240 |
| LpnPI | CCDG | 6 cut(s) | 206, 254, 262, 275, 282, 333 |
| Lsp1109I | GCAGC | 2 cut(s) | 29, 86 |
| MaeII | ACGT | 1 cut(s) | 174 |
| MboII | GAAGA | 3 cut(s) | 31, 127, 324 |
| MluCI | AATT | 1 cut(s) | 34 |
| MnlI | CCTC | 9 cut(s) | 31, 85, 100, 118, 121, 157, 163, 269, 304 |
| MseI | TTAA | 1 cut(s) | 69 |
| MspA1I | CMGCKG | 1 cut(s) | 256 |
| MspI | CCGG | 2 cut(s) | 241, 269 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 55, 258 |
| NlaIII | CATG | 3 cut(s) | 84, 200, 240 |
| NspI | RCATGY | 1 cut(s) | 240 |
| PaeI | GCATGC | 1 cut(s) | 240 |
| PaqCI | CACCTGC | 1 cut(s) | 257 |
| PfeI | GAWTC | 1 cut(s) | 101 |
| PkrI | GCNGC | 2 cut(s) | 19, 76 |
| PspPI | GGNCC | 1 cut(s) | 243 |
| SaqAI | TTAA | 1 cut(s) | 69 |
| SatI | GCNGC | 2 cut(s) | 18, 75 |
| Sau96I | GGNCC | 1 cut(s) | 243 |
| SetI | ASST | 5 cut(s) | 96, 177, 213, 251, 294 |
| SinI | GGWCC | 1 cut(s) | 243 |
| SphI | GCATGC | 1 cut(s) | 240 |
| Sse9I | AATT | 1 cut(s) | 34 |
| SsiI | CCGC | 2 cut(s) | 47, 254 |
| TaiI | ACGT | 1 cut(s) | 177 |
| TaqI | TCGA | 1 cut(s) | 231 |
| TasI | AATT | 1 cut(s) | 34 |
| TfiI | GAWTC | 1 cut(s) | 101 |
| Tru1I | TTAA | 1 cut(s) | 69 |
| Tru9I | TTAA | 1 cut(s) | 69 |
| TseI | GCWGC | 2 cut(s) | 17, 74 |
| TspDTI | ATGAA | 2 cut(s) | 16, 329 |
| VpaK11BI | GGWCC | 1 cut(s) | 243 |
| XceI | RCATGY | 1 cut(s) | 240 |