Ring finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51325 |
| fragaria_vesca | FvH4_1g11280 |
| malus_domestica | MD02G1125300.v1.1 MD15G1241000.v1.1 |
| prunus_persica | Prupe.7G173200_v2.0.a1 |
| pyrus_communis | pycom15g21250 |
| rosa_chinensis | RchiOBHm_Chr2g0098751 |
| rosa_laevigata | RLG00000016825 |
| rosa_roxburghii | Rroxscaffold_2G00143740 |
| rosa_rugosa | Rorug02G0074600 |
| rosa_samantha | Rh2AG122200 Rh2BG125900 Rh2CG126800 Rh2DG127900 |
| rosa_wichuraiana | Rw0G004230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 141 |
| AfeI | AGCGCT | 1 cut(s) | 101 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 268, 275 |
| AflIII | ACRYGT | 1 cut(s) | 248 |
| AgsI | TTSAA | 2 cut(s) | 43, 232 |
| AjiI | CACGTC | 1 cut(s) | 249 |
| AluBI | AGCT | 1 cut(s) | 119 |
| AluI | AGCT | 1 cut(s) | 119 |
| Aor51HI | AGCGCT | 1 cut(s) | 101 |
| ApeKI | GCWGC | 2 cut(s) | 58, 116 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 35 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 51 |
| AspLEI | GCGC | 1 cut(s) | 102 |
| AsuHPI | GGTGA | 2 cut(s) | 13, 137 |
| BbsI | GAAGAC | 2 cut(s) | 251, 293 |
| BbvI | GCAGC | 2 cut(s) | 70, 128 |
| BfmI | CTRYAG | 2 cut(s) | 15, 114 |
| BfoI | RGCGCY | 1 cut(s) | 103 |
| BisI | GCNGC | 2 cut(s) | 59, 117 |
| BlsI | GCNGC | 2 cut(s) | 60, 118 |
| BmgBI | CACGTC | 1 cut(s) | 249 |
| BmsI | GCATC | 1 cut(s) | 297 |
| BpiI | GAAGAC | 2 cut(s) | 251, 293 |
| BsaWI | WCCGGW | 1 cut(s) | 268 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 268, 275 |
| Bse118I | RCCGGY | 2 cut(s) | 192, 261 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 268, 275 |
| BseMII | CTCAG | 1 cut(s) | 99 |
| BseXI | GCAGC | 2 cut(s) | 70, 128 |
| BseYI | CCCAGC | 1 cut(s) | 353 |
| BsiSI | CCGG | 4 cut(s) | 193, 241, 262, 269 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 268, 275 |
| BspCNI | CTCAG | 1 cut(s) | 100 |
| BspMAI | CTGCAG | 1 cut(s) | 118 |
| BspQI | GCTCTTC | 1 cut(s) | 90 |
| BsrFI | RCCGGY | 2 cut(s) | 192, 261 |
| BssAI | RCCGGY | 2 cut(s) | 192, 261 |
| Bst4CI | ACNGT | 1 cut(s) | 16 |
| Bst6I | CTCTTC | 2 cut(s) | 90, 343 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 64 |
| BstC8I | GCNNGC | 2 cut(s) | 194, 238 |
| BstDEI | CTNAG | 1 cut(s) | 108 |
| BstH2I | RGCGCY | 1 cut(s) | 103 |
| BstHHI | GCGC | 1 cut(s) | 102 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 64, 113 |
| BstNSI | RCATGY | 1 cut(s) | 240 |
| BstSFI | CTRYAG | 2 cut(s) | 15, 114 |
| BstV1I | GCAGC | 2 cut(s) | 70, 128 |
| BstV2I | GAAGAC | 2 cut(s) | 251, 293 |
| BtrI | CACGTC | 1 cut(s) | 249 |
| Cac8I | GCNNGC | 2 cut(s) | 194, 238 |
| CfoI | GCGC | 1 cut(s) | 102 |
| Cfr10I | RCCGGY | 2 cut(s) | 192, 261 |
| CseI | GACGC | 1 cut(s) | 205 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 138, 173 |
| CviAII | CATG | 4 cut(s) | 175, 213, 237, 347 |
| CviJI | RGCY | 3 cut(s) | 61, 107, 119 |
| CviKI_1 | RGCY | 3 cut(s) | 61, 107, 119 |
| DdeI | CTNAG | 1 cut(s) | 108 |
| Eam1104I | CTCTTC | 2 cut(s) | 90, 343 |
| EarI | CTCTTC | 2 cut(s) | 90, 343 |
| Eco47III | AGCGCT | 1 cut(s) | 101 |
| Eco57I | CTGAAG | 1 cut(s) | 141 |
| FaeI | CATG | 4 cut(s) | 178, 216, 240, 350 |
| FaiI | YATR | 7 cut(s) | 70, 76, 176, 214, 238, 331, 348 |
| FatI | CATG | 4 cut(s) | 174, 212, 236, 346 |
| Fnu4HI | GCNGC | 2 cut(s) | 59, 117 |
| Fsp4HI | GCNGC | 2 cut(s) | 59, 117 |
| GlaI | GCGC | 1 cut(s) | 101 |
| GluI | GCNGC | 2 cut(s) | 59, 117 |
| GsaI | CCCAGC | 1 cut(s) | 357 |
| HaeII | RGCGCY | 1 cut(s) | 103 |
| HapII | CCGG | 4 cut(s) | 193, 241, 262, 269 |
| HgaI | GACGC | 1 cut(s) | 205 |
| HhaI | GCGC | 1 cut(s) | 102 |
| Hin1II | CATG | 4 cut(s) | 178, 216, 240, 350 |
| Hin6I | GCGC | 1 cut(s) | 100 |
| HinP1I | GCGC | 1 cut(s) | 100 |
| HinfI | GANTC | 3 cut(s) | 110, 180, 289 |
| HpaII | CCGG | 4 cut(s) | 193, 241, 262, 269 |
| HphI | GGTGA | 2 cut(s) | 13, 137 |
| Hpy188I | TCNGA | 1 cut(s) | 94 |
| Hpy188III | TCNNGA | 2 cut(s) | 150, 170 |
| Hpy99I | CGWCG | 1 cut(s) | 221 |
| HpyAV | CCTTC | 2 cut(s) | 34, 116 |
| HpyCH4III | ACNGT | 1 cut(s) | 16 |
| HpyCH4IV | ACGT | 1 cut(s) | 248 |
| HpyCH4V | TGCA | 1 cut(s) | 116 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 64, 113 |
| HpyF3I | CTNAG | 1 cut(s) | 108 |
| HpySE526I | ACGT | 1 cut(s) | 248 |
| Hsp92II | CATG | 4 cut(s) | 178, 216, 240, 350 |
| HspAI | GCGC | 1 cut(s) | 100 |
| KroI | GCCGGC | 1 cut(s) | 192 |
| KroNI | GCCGGC | 1 cut(s) | 194 |
| LguI | GCTCTTC | 1 cut(s) | 90 |
| LpnPI | CCDG | 6 cut(s) | 155, 206, 254, 275, 282, 339 |
| Lsp1109I | GCAGC | 2 cut(s) | 70, 128 |
| LweI | GCATC | 1 cut(s) | 297 |
| MaeII | ACGT | 1 cut(s) | 248 |
| MaeIII | GTNAC | 1 cut(s) | 19 |
| MboII | GAAGA | 5 cut(s) | 107, 256, 295, 298, 330 |
| MluCI | AATT | 1 cut(s) | 34 |
| MlyI | GAGTC | 2 cut(s) | 119, 283 |
| MnlI | CCTC | 4 cut(s) | 38, 154, 194, 269 |
| MroNI | GCCGGC | 1 cut(s) | 192 |
| MroXI | GAANNNNTTC | 1 cut(s) | 51 |
| MspA1I | CMGCKG | 1 cut(s) | 119 |
| MspI | CCGG | 4 cut(s) | 193, 241, 262, 269 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 64, 113 |
| NaeI | GCCGGC | 1 cut(s) | 194 |
| NgoMIV | GCCGGC | 1 cut(s) | 192 |
| NlaIII | CATG | 4 cut(s) | 178, 216, 240, 350 |
| NmuCI | GTSAC | 1 cut(s) | 19 |
| NspI | RCATGY | 1 cut(s) | 240 |
| PaeI | GCATGC | 1 cut(s) | 240 |
| PciSI | GCTCTTC | 1 cut(s) | 90 |
| PdiI | GCCGGC | 1 cut(s) | 194 |
| PdmI | GAANNNNTTC | 1 cut(s) | 51 |
| PfeI | GAWTC | 1 cut(s) | 180 |
| PkrI | GCNGC | 2 cut(s) | 60, 118 |
| PleI | GAGTC | 2 cut(s) | 118, 283 |
| PpsI | GAGTC | 2 cut(s) | 118, 283 |
| PspFI | CCCAGC | 1 cut(s) | 353 |
| PstI | CTGCAG | 1 cut(s) | 118 |
| PvuII | CAGCTG | 1 cut(s) | 119 |
| SapI | GCTCTTC | 1 cut(s) | 90 |
| SatI | GCNGC | 2 cut(s) | 59, 117 |
| SchI | GAGTC | 2 cut(s) | 119, 283 |
| SetI | ASST | 4 cut(s) | 26, 121, 127, 251 |
| SfaNI | GCATC | 1 cut(s) | 297 |
| SfcI | CTRYAG | 2 cut(s) | 15, 114 |
| SphI | GCATGC | 1 cut(s) | 240 |
| Sse9I | AATT | 1 cut(s) | 34 |
| TaaI | ACNGT | 1 cut(s) | 16 |
| TaiI | ACGT | 1 cut(s) | 251 |
| TaqI | TCGA | 1 cut(s) | 219 |
| TaqII | GACCGA | 1 cut(s) | 329 |
| TasI | AATT | 1 cut(s) | 34 |
| TfiI | GAWTC | 1 cut(s) | 180 |
| TseFI | GTSAC | 1 cut(s) | 19 |
| TseI | GCWGC | 2 cut(s) | 58, 116 |
| Tsp45I | GTSAC | 1 cut(s) | 19 |
| TspDTI | ATGAA | 1 cut(s) | 335 |
| TspGWI | ACGGA | 1 cut(s) | 243 |
| XceI | RCATGY | 1 cut(s) | 240 |
| XmnI | GAANNNNTTC | 1 cut(s) | 51 |