Ring finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51325 |
| fragaria_vesca | FvH4_1g11280 |
| malus_domestica | MD02G1125300.v1.1 MD15G1241000.v1.1 |
| prunus_persica | Prupe.7G173200_v2.0.a1 |
| pyrus_communis | pycom15g21250 |
| rosa_chinensis | RchiOBHm_Chr2g0098751 |
| rosa_laevigata | RLG00000016825 |
| rosa_roxburghii | Rroxscaffold_2G00143740 |
| rosa_rugosa | Rorug02G0074600 |
| rosa_samantha | Rh2AG122200 Rh2BG125900 Rh2CG126800 Rh2DG127900 |
| rosa_wichuraiana | Rw0G004230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 78 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 205, 212 |
| AflIII | ACRYGT | 1 cut(s) | 185 |
| AgsI | TTSAA | 1 cut(s) | 169 |
| AjiI | CACGTC | 1 cut(s) | 186 |
| AluBI | AGCT | 2 cut(s) | 56, 290 |
| AluI | AGCT | 2 cut(s) | 56, 290 |
| ApeKI | GCWGC | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 1 cut(s) | 74 |
| BbsI | GAAGAC | 2 cut(s) | 188, 230 |
| BbvI | GCAGC | 1 cut(s) | 65 |
| BfmI | CTRYAG | 1 cut(s) | 51 |
| BisI | GCNGC | 1 cut(s) | 54 |
| BlsI | GCNGC | 1 cut(s) | 55 |
| BmgBI | CACGTC | 1 cut(s) | 186 |
| BmsI | GCATC | 2 cut(s) | 7, 234 |
| BpiI | GAAGAC | 2 cut(s) | 188, 230 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 211, 243 |
| BsaWI | WCCGGW | 1 cut(s) | 205 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 205, 212 |
| Bse118I | RCCGGY | 2 cut(s) | 129, 198 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 205, 212 |
| BseXI | GCAGC | 1 cut(s) | 65 |
| BseYI | CCCAGC | 1 cut(s) | 290 |
| BsiSI | CCGG | 4 cut(s) | 130, 178, 199, 206 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 205, 212 |
| BspMAI | CTGCAG | 1 cut(s) | 55 |
| BsrFI | RCCGGY | 2 cut(s) | 129, 198 |
| BssAI | RCCGGY | 2 cut(s) | 129, 198 |
| Bst6I | CTCTTC | 2 cut(s) | 27, 280 |
| BstC8I | GCNNGC | 2 cut(s) | 131, 175 |
| BstNSI | RCATGY | 1 cut(s) | 177 |
| BstSFI | CTRYAG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 1 cut(s) | 65 |
| BstV2I | GAAGAC | 2 cut(s) | 188, 230 |
| BtrI | CACGTC | 1 cut(s) | 186 |
| Cac8I | GCNNGC | 2 cut(s) | 131, 175 |
| Cfr10I | RCCGGY | 2 cut(s) | 129, 198 |
| CseI | GACGC | 1 cut(s) | 142 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 75, 110 |
| CviAII | CATG | 4 cut(s) | 112, 150, 174, 284 |
| CviJI | RGCY | 3 cut(s) | 39, 56, 290 |
| CviKI_1 | RGCY | 3 cut(s) | 39, 56, 290 |
| Eam1104I | CTCTTC | 2 cut(s) | 27, 280 |
| EarI | CTCTTC | 2 cut(s) | 27, 280 |
| Eco57I | CTGAAG | 1 cut(s) | 78 |
| FaeI | CATG | 4 cut(s) | 115, 153, 177, 287 |
| FaiI | YATR | 8 cut(s) | 7, 13, 15, 113, 151, 175, 268, 285 |
| FatI | CATG | 4 cut(s) | 111, 149, 173, 283 |
| Fnu4HI | GCNGC | 1 cut(s) | 54 |
| Fsp4HI | GCNGC | 1 cut(s) | 54 |
| GluI | GCNGC | 1 cut(s) | 54 |
| GsaI | CCCAGC | 1 cut(s) | 294 |
| HapII | CCGG | 4 cut(s) | 130, 178, 199, 206 |
| HgaI | GACGC | 1 cut(s) | 142 |
| Hin1II | CATG | 4 cut(s) | 115, 153, 177, 287 |
| HinfI | GANTC | 3 cut(s) | 47, 117, 226 |
| HpaII | CCGG | 4 cut(s) | 130, 178, 199, 206 |
| HphI | GGTGA | 1 cut(s) | 74 |
| Hpy188I | TCNGA | 1 cut(s) | 31 |
| Hpy188III | TCNNGA | 2 cut(s) | 87, 107 |
| Hpy99I | CGWCG | 1 cut(s) | 158 |
| HpyAV | CCTTC | 1 cut(s) | 53 |
| HpyCH4IV | ACGT | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 2 cut(s) | 20, 53 |
| HpySE526I | ACGT | 1 cut(s) | 185 |
| Hsp92II | CATG | 4 cut(s) | 115, 153, 177, 287 |
| KroI | GCCGGC | 1 cut(s) | 129 |
| KroNI | GCCGGC | 1 cut(s) | 131 |
| LpnPI | CCDG | 6 cut(s) | 92, 143, 191, 212, 219, 276 |
| Lsp1109I | GCAGC | 1 cut(s) | 65 |
| LweI | GCATC | 2 cut(s) | 7, 234 |
| MaeII | ACGT | 1 cut(s) | 185 |
| MboII | GAAGA | 4 cut(s) | 44, 193, 235, 267 |
| MlyI | GAGTC | 2 cut(s) | 56, 220 |
| MnlI | CCTC | 5 cut(s) | 28, 91, 131, 206, 213 |
| MroNI | GCCGGC | 1 cut(s) | 129 |
| MspA1I | CMGCKG | 1 cut(s) | 56 |
| MspI | CCGG | 4 cut(s) | 130, 178, 199, 206 |
| NaeI | GCCGGC | 1 cut(s) | 131 |
| NgoMIV | GCCGGC | 1 cut(s) | 129 |
| NlaIII | CATG | 4 cut(s) | 115, 153, 177, 287 |
| NspI | RCATGY | 1 cut(s) | 177 |
| PaeI | GCATGC | 1 cut(s) | 177 |
| PdiI | GCCGGC | 1 cut(s) | 131 |
| PfeI | GAWTC | 1 cut(s) | 117 |
| PkrI | GCNGC | 1 cut(s) | 55 |
| PleI | GAGTC | 2 cut(s) | 55, 220 |
| PpsI | GAGTC | 2 cut(s) | 55, 220 |
| PspFI | CCCAGC | 1 cut(s) | 290 |
| PstI | CTGCAG | 1 cut(s) | 55 |
| PvuII | CAGCTG | 1 cut(s) | 56 |
| SatI | GCNGC | 1 cut(s) | 54 |
| SchI | GAGTC | 2 cut(s) | 56, 220 |
| SetI | ASST | 4 cut(s) | 58, 64, 188, 292 |
| SfaNI | GCATC | 2 cut(s) | 7, 234 |
| SfcI | CTRYAG | 1 cut(s) | 51 |
| SphI | GCATGC | 1 cut(s) | 177 |
| TaiI | ACGT | 1 cut(s) | 188 |
| TaqI | TCGA | 1 cut(s) | 156 |
| TaqII | GACCGA | 1 cut(s) | 266 |
| TfiI | GAWTC | 1 cut(s) | 117 |
| TseI | GCWGC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 1 cut(s) | 272 |
| TspGWI | ACGGA | 1 cut(s) | 180 |
| XceI | RCATGY | 1 cut(s) | 177 |