ABC transporter
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37360 AT3G53510 |
| fragaria_vesca | FvH4_6g14770 |
| malus_domestica | MD04G1116300.v1.1 MD12G1132000.v1.1 |
| prunus_persica | Prupe.6G246200_v2.0.a1 |
| pyrus_communis | pycom04g10630 pycom12g12800 |
| rosa_chinensis | RchiOBHm_Chr3g0467991 |
| rosa_laevigata | RLG00000024461 |
| rosa_multiflora | Rmu_co8482947.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00413230 |
| rosa_rugosa | Rorug03G0090900 |
| rosa_samantha | Rh3AG139700 Rh3BG161200 Rh3CG161100 Rh3DG161600 |
| rosa_wichuraiana | Rw3G013210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 213, 836 |
| AccBSI | CCGCTC | 2 cut(s) | 438, 2034 |
| AccI | GTMKAC | 1 cut(s) | 1441 |
| AccII | CGCG | 3 cut(s) | 118, 501, 1718 |
| AccIII | TCCGGA | 2 cut(s) | 1244, 1826 |
| AclI | AACGTT | 1 cut(s) | 1528 |
| AclWI | GGATC | 7 cut(s) | 1390, 1874, 1928, 1954, 1967, 2054, 2147 |
| AcoI | YGGCCR | 2 cut(s) | 30, 1656 |
| AcsI | RAATTY | 3 cut(s) | 331, 1031, 1925 |
| AcuI | CTGAAG | 3 cut(s) | 77, 863, 2042 |
| AcvI | CACGTG | 1 cut(s) | 1771 |
| AfaI | GTAC | 1 cut(s) | 1380 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 181, 213, 326, 344, 836, 976, 1096, 1722, 1907 |
| AflIII | ACRYGT | 2 cut(s) | 1493, 1768 |
| AgsI | TTSAA | 5 cut(s) | 271, 486, 533, 680, 1274 |
| AhlI | ACTAGT | 1 cut(s) | 1381 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 634, 666 |
| AleI | CACNNNNGTG | 1 cut(s) | 747 |
| Alw21I | GWGCWC | 1 cut(s) | 378 |
| Alw26I | GTCTC | 6 cut(s) | 102, 602, 781, 1246, 1768, 2057 |
| AlwI | GGATC | 7 cut(s) | 1390, 1874, 1928, 1954, 1967, 2054, 2147 |
| Ama87I | CYCGRG | 2 cut(s) | 402, 1225 |
| Aor13HI | TCCGGA | 2 cut(s) | 1244, 1826 |
| AoxI | GGCC | 5 cut(s) | 30, 52, 700, 1656, 1725 |
| ApeKI | GCWGC | 2 cut(s) | 713, 900 |
| ApoI | RAATTY | 3 cut(s) | 331, 1031, 1925 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1911, 1925, 1946 |
| AspA2I | CCTAGG | 1 cut(s) | 1369 |
| AspLEI | GCGC | 2 cut(s) | 118, 1217 |
| AspS9I | GGNCC | 2 cut(s) | 216, 1725 |
| AsuC2I | CCSGG | 2 cut(s) | 403, 404 |
| AsuHPI | GGTGA | 9 cut(s) | 327, 407, 515, 589, 743, 1031, 1378, 1422, 1705 |
| AsuII | TTCGAA | 1 cut(s) | 1929 |
| AvaI | CYCGRG | 2 cut(s) | 402, 1225 |
| AvaII | GGWCC | 1 cut(s) | 216 |
| AvrII | CCTAGG | 1 cut(s) | 1369 |
| AxyI | CCTNAGG | 1 cut(s) | 704 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1176, 1209 |
| BamHI | GGATCC | 1 cut(s) | 1959 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1899, 1931 |
| BauI | CACGAG | 1 cut(s) | 234 |
| BbrPI | CACGTG | 1 cut(s) | 1771 |
| BbsI | GAAGAC | 2 cut(s) | 222, 1348 |
| Bbv12I | GWGCWC | 1 cut(s) | 378 |
| BbvI | GCAGC | 2 cut(s) | 725, 912 |
| BccI | CCATC | 6 cut(s) | 44, 338, 412, 926, 930, 1613 |
| BceAI | ACGGC | 3 cut(s) | 1643, 1988, 2073 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1206, 1240 |
| BclI | TGATCA | 1 cut(s) | 691 |
| BcnI | CCSGG | 2 cut(s) | 403, 404 |
| BcoDI | GTCTC | 6 cut(s) | 102, 602, 781, 1246, 1768, 2057 |
| BcuI | ACTAGT | 1 cut(s) | 1381 |
| BfaI | CTAG | 8 cut(s) | 537, 975, 1370, 1382, 1400, 1421, 1842, 1889 |
| BfmI | CTRYAG | 3 cut(s) | 1520, 1916, 2145 |
| BisI | GCNGC | 8 cut(s) | 714, 898, 901, 997, 1632, 1641, 1982, 2035 |
| BlnI | CCTAGG | 1 cut(s) | 1369 |
| BlsI | GCNGC | 8 cut(s) | 715, 899, 902, 998, 1633, 1642, 1983, 2036 |
| Bme1390I | CCNGG | 2 cut(s) | 403, 404 |
| Bme18I | GGWCC | 1 cut(s) | 216 |
| BmeT110I | CYCGRG | 2 cut(s) | 402, 1225 |
| BmgT120I | GGNCC | 2 cut(s) | 216, 1725 |
| BmiI | GGNNCC | 6 cut(s) | 225, 787, 1000, 1678, 1874, 1961 |
| BmrFI | CCNGG | 2 cut(s) | 403, 404 |
| BmsI | GCATC | 4 cut(s) | 454, 558, 582, 1195 |
| BoxI | GACNNNNGTC | 1 cut(s) | 177 |
| BpiI | GAAGAC | 2 cut(s) | 222, 1348 |
| BpmI | CTGGAG | 1 cut(s) | 777 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1453 |
| Bpu14I | TTCGAA | 1 cut(s) | 1929 |
| BpuEI | CTTGAG | 2 cut(s) | 1150, 1321 |
| BpuMI | CCSGG | 2 cut(s) | 403, 404 |
| Bsa29I | ATCGAT | 2 cut(s) | 462, 2085 |
| BsaAI | YACGTR | 1 cut(s) | 1771 |
| BsaI | GGTCTC | 1 cut(s) | 781 |
| BsaJI | CCNNGG | 5 cut(s) | 219, 402, 600, 1369, 1680 |
| BsaWI | WCCGGW | 3 cut(s) | 1244, 1388, 1826 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 983, 1013 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 181, 213, 326, 344, 836, 976, 1096, 1722, 1907 |
| Bse118I | RCCGGY | 1 cut(s) | 1566 |
| Bse1I | ACTGG | 3 cut(s) | 852, 1511, 1868 |
| Bse21I | CCTNAGG | 1 cut(s) | 704 |
| Bse3DI | GCAATG | 2 cut(s) | 1151, 1479 |
| BseAI | TCCGGA | 2 cut(s) | 1244, 1826 |
| BseCI | ATCGAT | 2 cut(s) | 462, 2085 |
| BseDI | CCNNGG | 5 cut(s) | 219, 402, 600, 1369, 1680 |
| BseGI | GGATG | 3 cut(s) | 175, 918, 1605 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 181, 213, 326, 344, 836, 976, 1096, 1722, 1907 |
| BseMI | GCAATG | 2 cut(s) | 1151, 1479 |
| BseMII | CTCAG | 4 cut(s) | 618, 695, 1031, 1041 |
| BseNI | ACTGG | 3 cut(s) | 852, 1511, 1868 |
| BseRI | GAGGAG | 2 cut(s) | 774, 1808 |
| BseX3I | CGGCCG | 1 cut(s) | 1656 |
| BseXI | GCAGC | 2 cut(s) | 725, 912 |
| BseYI | CCCAGC | 1 cut(s) | 1984 |
| BsgI | GTGCAG | 1 cut(s) | 1518 |
| Bsh1236I | CGCG | 3 cut(s) | 118, 501, 1718 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1659 |
| BshFI | GGCC | 5 cut(s) | 32, 54, 702, 1658, 1727 |
| BshVI | ATCGAT | 2 cut(s) | 462, 2085 |
| BsiEI | CGRYCG | 1 cut(s) | 1659 |
| BsiHKAI | GWGCWC | 1 cut(s) | 378 |
| BsiHKCI | CYCGRG | 2 cut(s) | 402, 1225 |
| BslFI | GGGAC | 2 cut(s) | 753, 2001 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 181, 213, 326, 344, 836, 976, 1096, 1722, 1907 |
| BsmAI | GTCTC | 6 cut(s) | 102, 602, 781, 1246, 1768, 2057 |
| BsmBI | CGTCTC | 1 cut(s) | 602 |
| BsmFI | GGGAC | 2 cut(s) | 753, 2001 |
| BsmI | GAATGC | 2 cut(s) | 1466, 1634 |
| BsnI | GGCC | 5 cut(s) | 32, 54, 702, 1658, 1727 |
| Bso31I | GGTCTC | 1 cut(s) | 781 |
| BsoBI | CYCGRG | 2 cut(s) | 402, 1225 |
| Bsp119I | TTCGAA | 1 cut(s) | 1929 |
| Bsp1286I | GDGCHC | 1 cut(s) | 378 |
| Bsp13I | TCCGGA | 2 cut(s) | 1244, 1826 |
| BspANI | GGCC | 5 cut(s) | 32, 54, 702, 1658, 1727 |
| BspCNI | CTCAG | 4 cut(s) | 619, 696, 1030, 1040 |
| BspDI | ATCGAT | 2 cut(s) | 462, 2085 |
| BspEI | TCCGGA | 2 cut(s) | 1244, 1826 |
| BspFNI | CGCG | 3 cut(s) | 118, 501, 1718 |
| BspHI | TCATGA | 2 cut(s) | 147, 1539 |
| BspLI | GGNNCC | 6 cut(s) | 225, 787, 1000, 1678, 1874, 1961 |
| BspPI | GGATC | 7 cut(s) | 1390, 1874, 1928, 1954, 1967, 2054, 2147 |
| BspQI | GCTCTTC | 1 cut(s) | 2018 |
| BspT104I | TTCGAA | 1 cut(s) | 1929 |
| BspTNI | GGTCTC | 1 cut(s) | 781 |
| BsrBI | CCGCTC | 2 cut(s) | 438, 2034 |
| BsrDI | GCAATG | 2 cut(s) | 1151, 1479 |
| BsrFI | RCCGGY | 1 cut(s) | 1566 |
| BsrI | ACTGG | 3 cut(s) | 852, 1511, 1868 |
| BssAI | RCCGGY | 1 cut(s) | 1566 |
| BssECI | CCNNGG | 5 cut(s) | 219, 402, 600, 1369, 1680 |
| BssNAI | GTATAC | 1 cut(s) | 1442 |
| BssSI | CACGAG | 1 cut(s) | 234 |
| BssT1I | CCWWGG | 1 cut(s) | 1369 |
| Bst1107I | GTATAC | 1 cut(s) | 1442 |
| Bst2BI | CACGAG | 1 cut(s) | 234 |
| Bst4CI | ACNGT | 5 cut(s) | 601, 724, 988, 1789, 2146 |
| Bst6I | CTCTTC | 6 cut(s) | 590, 600, 1697, 1826, 2018, 2180 |
| BstBAI | YACGTR | 1 cut(s) | 1771 |
| BstBI | TTCGAA | 1 cut(s) | 1929 |
| BstC8I | GCNNGC | 4 cut(s) | 436, 542, 647, 1152 |
| BstDEI | CTNAG | 9 cut(s) | 369, 627, 654, 704, 1017, 1027, 1126, 1259, 1453 |
| BstDSI | CCRYGG | 1 cut(s) | 600 |
| BstEII | GGTNACC | 1 cut(s) | 1037 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1905 |
| BstF5I | GGATG | 3 cut(s) | 175, 918, 1605 |
| BstFNI | CGCG | 3 cut(s) | 118, 501, 1718 |
| BstHHI | GCGC | 2 cut(s) | 118, 1217 |
| BstMAI | GTCTC | 6 cut(s) | 102, 602, 781, 1246, 1768, 2057 |
| BstMCI | CGRYCG | 1 cut(s) | 1659 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1156, 1214, 1559, 1637, 1640, 1724, 1805, 2034 |
| BstNSI | RCATGY | 1 cut(s) | 1497 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 177 |
| BstPI | GGTNACC | 1 cut(s) | 1037 |
| BstSCI | CCNGG | 2 cut(s) | 401, 402 |
| BstSFI | CTRYAG | 3 cut(s) | 1520, 1916, 2145 |
| BstUI | CGCG | 3 cut(s) | 118, 501, 1718 |
| BstV1I | GCAGC | 2 cut(s) | 725, 912 |
| BstV2I | GAAGAC | 2 cut(s) | 222, 1348 |
| BstX2I | RGATCY | 3 cut(s) | 1866, 1933, 1959 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1863 |
| BstYI | RGATCY | 3 cut(s) | 1866, 1933, 1959 |
| BstZ17I | GTATAC | 1 cut(s) | 1442 |
| BstZI | CGGCCG | 1 cut(s) | 1656 |
| Bsu15I | ATCGAT | 2 cut(s) | 462, 2085 |
| Bsu36I | CCTNAGG | 1 cut(s) | 704 |
| BsuRI | GGCC | 5 cut(s) | 32, 54, 702, 1658, 1727 |
| BsuTUI | ATCGAT | 2 cut(s) | 462, 2085 |
| BtgI | CCRYGG | 1 cut(s) | 600 |
| BtgZI | GCGATG | 1 cut(s) | 63 |
| BtsCI | GGATG | 3 cut(s) | 175, 918, 1605 |
| BtsI | GCAGTG | 1 cut(s) | 111 |
| BtsIMutI | CAGTG | 4 cut(s) | 90, 111, 859, 2142 |
| Cac8I | GCNNGC | 4 cut(s) | 436, 542, 647, 1152 |
| CciI | TCATGA | 2 cut(s) | 147, 1539 |
| CfoI | GCGC | 2 cut(s) | 118, 1217 |
| Cfr10I | RCCGGY | 1 cut(s) | 1566 |
| Cfr13I | GGNCC | 2 cut(s) | 216, 1725 |
| Cfr9I | CCCGGG | 1 cut(s) | 402 |
| ClaI | ATCGAT | 2 cut(s) | 462, 2085 |
| CseI | GACGC | 2 cut(s) | 192, 2201 |
| Csp6I | GTAC | 1 cut(s) | 1379 |
| CviAII | CATG | 7 cut(s) | 148, 800, 862, 913, 1494, 1540, 2029 |
| CviQI | GTAC | 1 cut(s) | 1379 |
| DdeI | CTNAG | 9 cut(s) | 369, 627, 654, 704, 1017, 1027, 1126, 1259, 1453 |
| DraI | TTTAAA | 1 cut(s) | 516 |
| EaeI | YGGCCR | 2 cut(s) | 30, 1656 |
| EagI | CGGCCG | 1 cut(s) | 1656 |
| Eam1104I | CTCTTC | 6 cut(s) | 590, 600, 1697, 1826, 2018, 2180 |
| EarI | CTCTTC | 6 cut(s) | 590, 600, 1697, 1826, 2018, 2180 |
| EciI | GGCGGA | 3 cut(s) | 1355, 1618, 2075 |
| EclXI | CGGCCG | 1 cut(s) | 1656 |
| Eco130I | CCWWGG | 1 cut(s) | 1369 |
| Eco31I | GGTCTC | 1 cut(s) | 781 |
| Eco47I | GGWCC | 1 cut(s) | 216 |
| Eco52I | CGGCCG | 1 cut(s) | 1656 |
| Eco57I | CTGAAG | 3 cut(s) | 77, 863, 2042 |
| Eco72I | CACGTG | 1 cut(s) | 1771 |
| Eco81I | CCTNAGG | 1 cut(s) | 704 |
| Eco88I | CYCGRG | 2 cut(s) | 402, 1225 |
| Eco91I | GGTNACC | 1 cut(s) | 1037 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1905 |
| EcoO65I | GGTNACC | 1 cut(s) | 1037 |
| EcoRI | GAATTC | 3 cut(s) | 331, 1031, 1925 |
| EcoT14I | CCWWGG | 1 cut(s) | 1369 |
| EcoT22I | ATGCAT | 1 cut(s) | 469 |
| ErhI | CCWWGG | 1 cut(s) | 1369 |
| Esp3I | CGTCTC | 1 cut(s) | 602 |
| FaeI | CATG | 7 cut(s) | 151, 803, 865, 916, 1497, 1543, 2032 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 564, 596, 950, 982 |
| FaqI | GGGAC | 2 cut(s) | 753, 2001 |
| FatI | CATG | 7 cut(s) | 147, 799, 861, 912, 1493, 1539, 2028 |
| FauI | CCCGC | 2 cut(s) | 111, 431 |
| FbaI | TGATCA | 1 cut(s) | 691 |
| FblI | GTMKAC | 1 cut(s) | 1441 |
| Fnu4HI | GCNGC | 8 cut(s) | 714, 898, 901, 997, 1632, 1641, 1982, 2035 |
| FokI | GGATG | 3 cut(s) | 182, 905, 1592 |
| Fsp4HI | GCNGC | 8 cut(s) | 714, 898, 901, 997, 1632, 1641, 1982, 2035 |
| FspBI | CTAG | 8 cut(s) | 537, 975, 1370, 1382, 1400, 1421, 1842, 1889 |
| GlaI | GCGC | 2 cut(s) | 117, 1216 |
| GluI | GCNGC | 8 cut(s) | 714, 898, 901, 997, 1632, 1641, 1982, 2035 |
| GsaI | CCCAGC | 1 cut(s) | 1988 |
| GsuI | CTGGAG | 1 cut(s) | 777 |
| HaeIII | GGCC | 5 cut(s) | 32, 54, 702, 1658, 1727 |
| HgaI | GACGC | 2 cut(s) | 192, 2201 |
| HhaI | GCGC | 2 cut(s) | 118, 1217 |
| Hin1II | CATG | 7 cut(s) | 151, 803, 865, 916, 1497, 1543, 2032 |
| Hin6I | GCGC | 2 cut(s) | 116, 1215 |
| HinP1I | GCGC | 2 cut(s) | 116, 1215 |
| HindIII | AAGCTT | 1 cut(s) | 1235 |
| HphI | GGTGA | 9 cut(s) | 327, 407, 515, 589, 743, 1031, 1378, 1422, 1705 |
| Hpy166II | GTNNAC | 4 cut(s) | 991, 1319, 1442, 1479 |
| Hpy8I | GTNNAC | 4 cut(s) | 991, 1319, 1442, 1479 |
| Hpy99I | CGWCG | 3 cut(s) | 1942, 2080, 2217 |
| HpyAV | CCTTC | 8 cut(s) | 252, 277, 401, 661, 765, 1106, 1747, 1901 |
| HpyCH4III | ACNGT | 5 cut(s) | 601, 724, 988, 1789, 2146 |
| HpyCH4IV | ACGT | 6 cut(s) | 611, 1528, 1581, 1745, 1770, 2052 |
| HpyCH4V | TGCA | 9 cut(s) | 137, 467, 544, 571, 857, 1076, 1208, 1283, 1499 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1156, 1214, 1559, 1637, 1640, 1724, 1805, 2034 |
| HpyF3I | CTNAG | 9 cut(s) | 369, 627, 654, 704, 1017, 1027, 1126, 1259, 1453 |
| HpySE526I | ACGT | 6 cut(s) | 611, 1528, 1581, 1745, 1770, 2052 |
| Hsp92II | CATG | 7 cut(s) | 151, 803, 865, 916, 1497, 1543, 2032 |
| HspAI | GCGC | 2 cut(s) | 116, 1215 |
| Kpn2I | TCCGGA | 2 cut(s) | 1244, 1826 |
| Ksp22I | TGATCA | 1 cut(s) | 691 |
| LguI | GCTCTTC | 1 cut(s) | 2018 |
| LmnI | GCTCC | 7 cut(s) | 88, 381, 431, 1004, 1247, 1373, 1682 |
| Lsp1109I | GCAGC | 2 cut(s) | 725, 912 |
| LweI | GCATC | 4 cut(s) | 454, 558, 582, 1195 |
| MaeI | CTAG | 8 cut(s) | 537, 975, 1370, 1382, 1400, 1421, 1842, 1889 |
| MaeII | ACGT | 6 cut(s) | 611, 1528, 1581, 1745, 1770, 2052 |
| MaeIII | GTNAC | 9 cut(s) | 101, 127, 932, 1037, 1384, 1529, 1741, 2053, 2071 |
| MbiI | CCGCTC | 2 cut(s) | 438, 2034 |
| MfeI | CAATTG | 1 cut(s) | 780 |
| MflI | RGATCY | 3 cut(s) | 1866, 1933, 1959 |
| MhlI | GDGCHC | 1 cut(s) | 378 |
| MlyI | GAGTC | 3 cut(s) | 187, 839, 1659 |
| MmeI | TCCRAC | 2 cut(s) | 1961, 2021 |
| Mph1103I | ATGCAT | 1 cut(s) | 469 |
| MroI | TCCGGA | 2 cut(s) | 1244, 1826 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1911, 1925, 1946 |
| MseI | TTAA | 3 cut(s) | 309, 515, 962 |
| MslI | CAYNNNNRTG | 4 cut(s) | 152, 747, 1391, 1538 |
| MspA1I | CMGCKG | 2 cut(s) | 996, 1984 |
| MspR9I | CCNGG | 2 cut(s) | 403, 404 |
| MunI | CAATTG | 1 cut(s) | 780 |
| Mva1269I | GAATGC | 2 cut(s) | 1466, 1634 |
| MvnI | CGCG | 3 cut(s) | 118, 501, 1718 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1156, 1214, 1559, 1637, 1640, 1724, 1805, 2034 |
| NciI | CCSGG | 2 cut(s) | 403, 404 |
| NlaIII | CATG | 7 cut(s) | 151, 803, 865, 916, 1497, 1543, 2032 |
| NlaIV | GGNNCC | 6 cut(s) | 225, 787, 1000, 1678, 1874, 1961 |
| NmeAIII | GCCGAG | 3 cut(s) | 678, 954, 1634 |
| NmuCI | GTSAC | 6 cut(s) | 101, 127, 1037, 1384, 1741, 2053 |
| NsiI | ATGCAT | 1 cut(s) | 469 |
| NspI | RCATGY | 1 cut(s) | 1497 |
| NspV | TTCGAA | 1 cut(s) | 1929 |
| OliI | CACNNNNGTG | 1 cut(s) | 747 |
| PaeR7I | CTCGAG | 1 cut(s) | 1225 |
| PagI | TCATGA | 2 cut(s) | 147, 1539 |
| PciI | ACATGT | 1 cut(s) | 1493 |
| PciSI | GCTCTTC | 1 cut(s) | 2018 |
| PctI | GAATGC | 2 cut(s) | 1466, 1634 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1911, 1925, 1946 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 213, 836 |
| PkrI | GCNGC | 8 cut(s) | 715, 899, 902, 998, 1633, 1642, 1983, 2036 |
| PleI | GAGTC | 3 cut(s) | 186, 839, 1659 |
| PmaCI | CACGTG | 1 cut(s) | 1771 |
| PmlI | CACGTG | 1 cut(s) | 1771 |
| PpsI | GAGTC | 3 cut(s) | 186, 839, 1659 |
| Ppu21I | YACGTR | 1 cut(s) | 1771 |
| PscI | ACATGT | 1 cut(s) | 1493 |
| PshAI | GACNNNNGTC | 1 cut(s) | 177 |
| Psp1406I | AACGTT | 1 cut(s) | 1528 |
| PspCI | CACGTG | 1 cut(s) | 1771 |
| PspEI | GGTNACC | 1 cut(s) | 1037 |
| PspFI | CCCAGC | 1 cut(s) | 1984 |
| PspN4I | GGNNCC | 6 cut(s) | 225, 787, 1000, 1678, 1874, 1961 |
| PspPI | GGNCC | 2 cut(s) | 216, 1725 |
| PsuI | RGATCY | 3 cut(s) | 1866, 1933, 1959 |
| RsaI | GTAC | 1 cut(s) | 1380 |
| RsaNI | GTAC | 1 cut(s) | 1379 |
| RseI | CAYNNNNRTG | 4 cut(s) | 152, 747, 1391, 1538 |
| SapI | GCTCTTC | 1 cut(s) | 2018 |
| SaqAI | TTAA | 3 cut(s) | 309, 515, 962 |
| SatI | GCNGC | 8 cut(s) | 714, 898, 901, 997, 1632, 1641, 1982, 2035 |
| Sau96I | GGNCC | 2 cut(s) | 216, 1725 |
| SchI | GAGTC | 3 cut(s) | 187, 839, 1659 |
| ScrFI | CCNGG | 2 cut(s) | 403, 404 |
| SduI | GDGCHC | 1 cut(s) | 378 |
| SfaNI | GCATC | 4 cut(s) | 454, 558, 582, 1195 |
| SfcI | CTRYAG | 3 cut(s) | 1520, 1916, 2145 |
| Sfr274I | CTCGAG | 1 cut(s) | 1225 |
| SfuI | TTCGAA | 1 cut(s) | 1929 |
| SinI | GGWCC | 1 cut(s) | 216 |
| SlaI | CTCGAG | 1 cut(s) | 1225 |
| SmaI | CCCGGG | 1 cut(s) | 404 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 152, 747, 1391, 1538 |
| SmlI | CTYRAG | 3 cut(s) | 1165, 1225, 1336 |
| SmoI | CTYRAG | 3 cut(s) | 1165, 1225, 1336 |
| SpeI | ACTAGT | 1 cut(s) | 1381 |
| SspI | AATATT | 1 cut(s) | 1410 |
| SspMI | CTAG | 8 cut(s) | 537, 975, 1370, 1382, 1400, 1421, 1842, 1889 |
| StyD4I | CCNGG | 2 cut(s) | 401, 402 |
| StyI | CCWWGG | 1 cut(s) | 1369 |
| TaaI | ACNGT | 5 cut(s) | 601, 724, 988, 1789, 2146 |
| TaiI | ACGT | 6 cut(s) | 614, 1531, 1584, 1748, 1773, 2055 |
| TaqII | GACCGA | 1 cut(s) | 1025 |
| TatI | WGTACW | 1 cut(s) | 1378 |
| TauI | GCSGC | 6 cut(s) | 900, 999, 1634, 1643, 1984, 2037 |
| Tru1I | TTAA | 3 cut(s) | 309, 515, 962 |
| Tru9I | TTAA | 3 cut(s) | 309, 515, 962 |
| TscAI | CASTG | 4 cut(s) | 90, 118, 859, 2149 |
| TseFI | GTSAC | 6 cut(s) | 101, 127, 1037, 1384, 1741, 2053 |
| TseI | GCWGC | 2 cut(s) | 713, 900 |
| Tsp45I | GTSAC | 6 cut(s) | 101, 127, 1037, 1384, 1741, 2053 |
| TspDTI | ATGAA | 3 cut(s) | 377, 1528, 1825 |
| TspGWI | ACGGA | 4 cut(s) | 216, 243, 1079, 2126 |
| TspMI | CCCGGG | 1 cut(s) | 402 |
| TspRI | CASTG | 4 cut(s) | 90, 118, 859, 2149 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 213, 836 |
| VpaK11BI | GGWCC | 1 cut(s) | 216 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1905 |
| XapI | RAATTY | 3 cut(s) | 331, 1031, 1925 |
| XbaI | TCTAGA | 1 cut(s) | 1841 |
| XceI | RCATGY | 1 cut(s) | 1497 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 859 |
| XhoI | CTCGAG | 1 cut(s) | 1225 |
| XmaI | CCCGGG | 1 cut(s) | 402 |
| XmaJI | CCTAGG | 1 cut(s) | 1369 |
| XmiI | GTMKAC | 1 cut(s) | 1441 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1911, 1925, 1946 |
| XspI | CTAG | 8 cut(s) | 537, 975, 1370, 1382, 1400, 1421, 1842, 1889 |
| Zsp2I | ATGCAT | 1 cut(s) | 469 |