Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0012813

Physical Location & Seq

Genomic Coordinates Reverse (-)

7074069 .. 7077726

Gene Structure 3658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0090900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

ATGGCTGCTTGTGCTTTGCTGGGTGACAATGGCGACCATGTCAGCGGCAATGGAAGCAATAACAACAACAGCAGTGCTAGCCACAGCCCGTTGAATTCCACCAGCCAAGGAAGCAGCGTAGTCGAGCAGCAGAACCCGGCTCGGTCGAAAATGGTGAGGAAGAGAATGGCTTCCGAGATTGAAGTGCAGCCCACCAACAACACCAACTCAATCAGAATTAGCAGCAGCAACAATAACGGTGATAATTATATGAGAGTTTCGCGTAATCGGAGCGTTATGCTAAATCCAAACCCGACCCATGACAAAGTGAATATGGTCTCCAACTACTCCACCACTATGCTCAATCTACCAGTACCATCATCTTCCAACAATTTGACCACGCTCATGACGTCAGGAGGTGGTGGGGTTTTATCAACTGCTTCCGCTTCTTCTTCCTCTCCAAGCTGGGGTCCTATAGATCCCTTGTCGCTCCATCACCCGATTCACCAGACACAGATCGCCGCAGCAACCACTCCTCCTCCCGCCGTCTGCGGCTTTTCGGGGCTCCCTCTCTTCCCACCGGAAAGAACTTCTCCTCCGAATCATACTAGCACCACGCTTTCTACCGTCATGGATCAAGACAGCCCCGCCACCGCCTGGATCGACGGCATCATAAAAGACCTCATCCACAGCTCCACCAACGTCTCCATTCCTCAGCTCATCCAGAACGTCAGAGAGATAATCTTCCCTTGCAATCCCAACCTCGCTTCGCTGCTCGAGTACCGCCTCCGCTCCATATCCGAGCCGCCCCCGCCTCCGATCCCTATCTTCAACAGAAGAAGAGAGCAAGGTCCCGGGCTGCAGCTGAATCTCGACTCTAACTCCTCCGGCATAAATGACGTCACTGCAGTTTTCCCTTCTTCAACTACCAGCGGTCACTCTGGTCATCACCATGTGATGAACCAGGAGTTGTTTTTGAACTGGGGAGACACCCTACCCCAACAACAACAGCAGCAGCAACAATCCAACCCTACATCTTCCCCTACTTGCAACGAAAGCAACATCCAGGTTCAACAACACCACATTTCCCAGGCGGTTCACCCACAACAACAGACACTAGATAAGCAGCAGCAGCAACAAAACACTCCATCCCCGGCCGCCGAGTCTACACAAACCACCACTGCACCACCACCATCTACAACAGCCCCAGCCACGCCGTCCCCGGCGGTACTAATGCGAGAGAAGAAAGAAGAGATGCGGCAGCAGAAGCGAGACGAAGAGGGACTGCACCTGCTCACCTTACTCCTCCATTGCGCCGAAGCTGTGTCCGCAGATAACTTTGAAGAAGCAACCAAAATGTTACTCGAGATTTCCGAGCTCTCAACCCCGTTCGGCACCTCCGCGCAGCGCGTGGCGGCCTACTTCTCCGAGGCCATGTCAGCGAGACTAGTCAGCTCCTGTCTCGGATTCTATGCCTCCCTCCCGGTCTCCTCCGCTCCCATCACCCACTCCCAGAAGCTCGTCTCCGCCTTCCAAGTCTTCAACGGAATCAGCCCGTTCGTGAAGTTCTCCCACTTCACGGCGAACCAAGCCATCCAGGAAGCATTCGAAAGAGAAGACCGGGTGCACATAGTAGATCTCGACATAATGCAAGGCCTACAATGGCCGGGGCTGTTTCACATTCTCGCCTCCCGGCCCGGTGGGCCGCCCTACGTCCGCCTCACCGGTCTTGGAACCTCCATGGAGGCTCTAGAAGCCACCGGAAAACGCTTAACCGACTTCGCCGACAAGCTAGGGCTTCCGTTCGAGTTCTTTCCGGTGGCGGAGAAGGTAGGCAGTTTGGACCCTGACCGGCTCAACATAAGCAAGAGAGAGGCCGTCGCCGTCCACTGGCTGCAGCATTCTCTTTACGACGTCACCGGCTCCGACGCCAACACGCTCTGGCTTTTGCAGAGATTGGCACCAAAAGTAGTGACGGTAGTGGAGCAGGACTTGAGTCACGCCGGTTCATTTCTAGGGAGGTTTGTGGAGGCCATACACTACTACTCGGCCTTGTTCGACTCTTTGGGTGCAAGCTACGGTGAAGAGAGCGAGGAGAGGCACGTCGTGGAGCAGCAGCTTTTGTCGAGGGAGATTCGGAATGTTCTAGCCGTGGGAGGCCCGTCGAGGAGTGGAGAAGTGAAGTTCCATAACTGGAGGGAGAAGTTCCAGCAGAGTGGGTTCAGGGGGATTTCTTTGGCGGGAAATGCAGCGACTCAGGCAACCTTGCTGCTTGGGATGTTCCCTTGTGATGGGTACACATTGGTGGAGGACAATGGGACTCTTAAGCTTGGTTGGAAGGACCTTTGTTTGCTGACTGCTTCGGCTTGGAGACCACCTTATCATGCTACTACCAACCCCAACCTTCACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006810 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0010345 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044237 GO:0044249 GO:0044425 GO:0044464 GO:0044550 GO:0051179 GO:0051234 GO:0055085 GO:0071704 GO:0071944 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

797

Amino Acids

86.84

Weight (kDa)

6.03

Isoelectric Point (pI)

57.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	425 - 784	1.1e-129	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37360 AT3G53510
fragaria_vesca	FvH4_6g14770
malus_domestica	MD04G1116300.v1.1 MD12G1132000.v1.1
prunus_persica	Prupe.6G246200_v2.0.a1
pyrus_communis	pycom04g10630 pycom12g12800
rosa_chinensis	RchiOBHm_Chr3g0467991
rosa_laevigata	RLG00000024461
rosa_multiflora	Rmu_co8482947.1_g000001
rosa_roxburghii	Rroxscaffold_6G00413230
rosa_rugosa	Rorug03G0090900
rosa_samantha	Rh3AG139700 Rh3BG161200 Rh3CG161100 Rh3DG161600
rosa_wichuraiana	Rw3G013210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1278
AatII	GACGTC	3 cut(s)	392, 882, 1896
Acc36I	ACCTGC	1 cut(s)	1278
AccB1I	GGYRCC	2 cut(s)	1373, 1939
AccB7I	CCANNNNNTGG	1 cut(s)	636
AccBSI	CCGCTC	2 cut(s)	771, 1475
AccI	GTMKAC	1 cut(s)	1145
AccII	CGCG	3 cut(s)	262, 1382, 1389
AclWI	GGATC	4 cut(s)	452, 621, 647, 793
AcoI	YGGCCR	2 cut(s)	1134, 1643
AcsI	RAATTY	1 cut(s)	94
AcyI	GRCGYC	4 cut(s)	389, 879, 1893, 1908
AdeI	CACNNNGTG	2 cut(s)	934, 2086
AfaI	GTAC	4 cut(s)	354, 761, 1209, 2276
AfiI	CCNNNNNNNGG	5 cut(s)	446, 636, 1558, 1869, 2270
AflII	CTTAAG	1 cut(s)	2303
AgeI	ACCGGT	1 cut(s)	1703
AgsI	TTSAA	8 cut(s)	94, 182, 811, 903, 958, 1052, 1322, 1522
AhlI	ACTAGT	1 cut(s)	1426
AjiI	CACGTC	1 cut(s)	2083
AjnI	CCWGG	5 cut(s)	635, 942, 1044, 1068, 1575
AleI	CACNNNNGTG	1 cut(s)	2282
AloI	GAACNNNNNNTCC	2 cut(s)	559, 591
Alw21I	GWGCWC	2 cut(s)	1359, 1608
Alw26I	GTCTC	9 cut(s)	322, 688, 960, 1245, 1417, 1445, 1471, 1507, 2344
Alw44I	GTGCAC	1 cut(s)	1604
AlwI	GGATC	4 cut(s)	452, 621, 647, 793
AlwNI	CAGNNNCTG	1 cut(s)	1437
Ama87I	CYCGRG	3 cut(s)	755, 833, 1343
ApaLI	GTGCAC	1 cut(s)	1604
ApoI	RAATTY	1 cut(s)	94
AsiGI	ACCGGT	1 cut(s)	1703
Asp700I	GAANNNNTTC	1 cut(s)	169
AspLEI	GCGC	3 cut(s)	1295, 1384, 1389
AspS9I	GGNCC	7 cut(s)	449, 830, 1674, 1682, 1822, 2138, 2320
AsuII	TTCGAA	1 cut(s)	1587
AsuNHI	GCTAGC	1 cut(s)	77
AvaI	CYCGRG	3 cut(s)	755, 833, 1343
AvaII	GGWCC	4 cut(s)	449, 830, 1822, 2320
BaeGI	GKGCMC	1 cut(s)	1608
BanI	GGYRCC	2 cut(s)	1373, 1939
BanII	GRGCYC	2 cut(s)	546, 1359
BbsI	GAAGAC	2 cut(s)	1510, 1602
Bbv12I	GWGCWC	2 cut(s)	1359, 1608
BbvCI	CCTCAGC	1 cut(s)	693
BccI	CCATC	7 cut(s)	364, 480, 1135, 1180, 1487, 1580, 2264
BceAI	ACGGC	7 cut(s)	509, 661, 1180, 1575, 1841, 1847, 2114
BcgI	CGANNNNNNTGC	2 cut(s)	103, 137
BciT130I	CCWGG	5 cut(s)	637, 944, 1046, 1070, 1577
BcoDI	GTCTC	9 cut(s)	322, 688, 960, 1245, 1417, 1445, 1471, 1507, 2344
BcuI	ACTAGT	1 cut(s)	1426
BfaI	CTAG	8 cut(s)	78, 588, 1097, 1427, 1730, 1772, 1994, 2126
BfmI	CTRYAG	4 cut(s)	453, 839, 885, 1874
BfrI	CTTAAG	1 cut(s)	2303
BfuAI	ACCTGC	1 cut(s)	1278
BglI	GCCNNNNNGGC	1 cut(s)	1681
BglII	AGATCT	1 cut(s)	1615
Bme18I	GGWCC	4 cut(s)	449, 830, 1822, 2320
BmeT110I	CYCGRG	3 cut(s)	755, 833, 1343
BmgBI	CACGTC	1 cut(s)	2083
BmgT120I	GGNCC	7 cut(s)	449, 830, 1674, 1682, 1822, 2138, 2320
BmiI	GGNNCC	8 cut(s)	450, 545, 832, 1375, 1714, 1824, 1903, 1941
BmrI	ACTGGG	1 cut(s)	970
BmsI	GCATC	2 cut(s)	657, 1224
BmtI	GCTAGC	1 cut(s)	81
BmuI	ACTGGG	1 cut(s)	970
BoxI	GACNNNNGTC	1 cut(s)	1974
BpiI	GAAGAC	2 cut(s)	1510, 1602
BpmI	CTGGAG	1 cut(s)	2194
Bpu10I	CCTNAGC	1 cut(s)	693
Bpu14I	TTCGAA	1 cut(s)	1587
BpuEI	CTTGAG	1 cut(s)	1993
BsaBI	GATNNNNATC	1 cut(s)	803
BsaHI	GRCGYC	4 cut(s)	389, 879, 1893, 1908
BsaI	GGTCTC	3 cut(s)	322, 1471, 2344
BsaJI	CCNNGG	9 cut(s)	106, 833, 1068, 1131, 1200, 1407, 1646, 1719, 2130
BsaWI	WCCGGW	4 cut(s)	559, 1703, 1739, 1795
BsaXI	ACNNNNNCTCC	8 cut(s)	499, 502, 529, 532, 559, 589, 845, 875
Bsc4I	CCNNNNNNNGG	5 cut(s)	446, 636, 1558, 1869, 2270
Bse118I	RCCGGY	4 cut(s)	1703, 1830, 1898, 1982
Bse1I	ACTGG	4 cut(s)	350, 965, 1874, 2177
Bse3DI	GCAATG	2 cut(s)	55, 1288
Bse8I	GATNNNNATC	1 cut(s)	803
BseBI	CCWGG	5 cut(s)	637, 944, 1046, 1070, 1577
BseDI	CCNNGG	9 cut(s)	106, 833, 1068, 1131, 1200, 1407, 1646, 1719, 2130
BseGI	GGATG	6 cut(s)	663, 699, 1041, 1127, 1572, 2262
BseJI	GATNNNNATC	1 cut(s)	803
BseLI	CCNNNNNNNGG	5 cut(s)	446, 636, 1558, 1869, 2270
BseMI	GCAATG	2 cut(s)	55, 1288
BseMII	CTCAG	2 cut(s)	707, 2249
BseNI	ACTGG	4 cut(s)	350, 965, 1874, 2177
BseRI	GAGGAG	8 cut(s)	504, 507, 564, 853, 1274, 1459, 2087, 2161
BseSI	GKGCMC	1 cut(s)	1608
BseX3I	CGGCCG	1 cut(s)	1134
BseYI	CCCAGC	3 cut(s)	19, 444, 1186
BsgI	GTGCAG	3 cut(s)	206, 1146, 1250
Bsh1236I	CGCG	3 cut(s)	262, 1382, 1389
Bsh1285I	CGRYCG	2 cut(s)	146, 1137
BshNI	GGYRCC	2 cut(s)	1373, 1939
BshTI	ACCGGT	1 cut(s)	1703
BsiEI	CGRYCG	2 cut(s)	146, 1137
BsiHKAI	GWGCWC	2 cut(s)	1359, 1608
BsiHKCI	CYCGRG	3 cut(s)	755, 833, 1343
BslFI	GGGAC	4 cut(s)	816, 1183, 1275, 2311
BslI	CCNNNNNNNGG	5 cut(s)	446, 636, 1558, 1869, 2270
BsmAI	GTCTC	9 cut(s)	322, 688, 960, 1245, 1417, 1445, 1471, 1507, 2344
BsmBI	CGTCTC	3 cut(s)	688, 1245, 1507
BsmFI	GGGAC	4 cut(s)	816, 1183, 1275, 2311
BsmI	GAATGC	2 cut(s)	1583, 1879
Bso31I	GGTCTC	3 cut(s)	322, 1471, 2344
BsoBI	CYCGRG	3 cut(s)	755, 833, 1343
Bsp119I	TTCGAA	1 cut(s)	1587
Bsp1286I	GDGCHC	3 cut(s)	546, 1359, 1608
Bsp143I	GATC	6 cut(s)	457, 495, 613, 639, 798, 1615
Bsp19I	CCATGG	1 cut(s)	1719
BspCNI	CTCAG	2 cut(s)	706, 2248
BspFNI	CGCG	3 cut(s)	262, 1382, 1389
BspHI	TCATGA	1 cut(s)	384
BspLI	GGNNCC	8 cut(s)	450, 545, 832, 1375, 1714, 1824, 1903, 1941
BspMAI	CTGCAG	3 cut(s)	843, 889, 1878
BspMI	ACCTGC	1 cut(s)	1278
BspOI	GCTAGC	1 cut(s)	81
BspPI	GGATC	4 cut(s)	452, 621, 647, 793
BspT104I	TTCGAA	1 cut(s)	1587
BspT107I	GGYRCC	2 cut(s)	1373, 1939
BspTI	CTTAAG	1 cut(s)	2303
BspTNI	GGTCTC	3 cut(s)	322, 1471, 2344
BsrBI	CCGCTC	2 cut(s)	771, 1475
BsrDI	GCAATG	2 cut(s)	55, 1288
BsrFI	RCCGGY	4 cut(s)	1703, 1830, 1898, 1982
BsrI	ACTGG	4 cut(s)	350, 965, 1874, 2177
BssAI	RCCGGY	4 cut(s)	1703, 1830, 1898, 1982
BssECI	CCNNGG	9 cut(s)	106, 833, 1068, 1131, 1200, 1407, 1646, 1719, 2130
BssMI	GATC	6 cut(s)	457, 495, 613, 639, 798, 1615
BssNI	GRCGYC	4 cut(s)	389, 879, 1893, 1908
BssT1I	CCWWGG	2 cut(s)	106, 1719
Bst2UI	CCWGG	5 cut(s)	637, 944, 1046, 1070, 1577
Bst4CI	ACNGT	4 cut(s)	239, 607, 1957, 2060
Bst6I	CTCTTC	6 cut(s)	155, 557, 814, 1224, 1251, 2058
BstACI	GRCGYC	4 cut(s)	389, 879, 1893, 1908
BstAFI	CTTAAG	1 cut(s)	2303
BstBI	TTCGAA	1 cut(s)	1587
BstC8I	GCNNGC	2 cut(s)	79, 2053
BstDEI	CTNAG	2 cut(s)	693, 2235
BstDSI	CCRYGG	2 cut(s)	1719, 2130
BstF5I	GGATG	6 cut(s)	663, 699, 1041, 1127, 1572, 2262
BstFNI	CGCG	3 cut(s)	262, 1382, 1389
BstHHI	GCGC	3 cut(s)	1295, 1384, 1389
BstKTI	GATC	6 cut(s)	460, 498, 616, 642, 801, 1618
BstMAI	GTCTC	9 cut(s)	322, 688, 960, 1245, 1417, 1445, 1471, 1507, 2344
BstMBI	GATC	6 cut(s)	457, 495, 613, 639, 798, 1615
BstMCI	CGRYCG	2 cut(s)	146, 1137
BstNI	CCWGG	5 cut(s)	637, 944, 1046, 1070, 1577
BstPAI	GACNNNNGTC	1 cut(s)	1974
BstSFI	CTRYAG	4 cut(s)	453, 839, 885, 1874
BstSLI	GKGCMC	1 cut(s)	1608
BstUI	CGCG	3 cut(s)	262, 1382, 1389
BstV2I	GAAGAC	2 cut(s)	1510, 1602
BstX2I	RGATCY	2 cut(s)	457, 1615
BstXI	CCANNNNNNTGG	1 cut(s)	2195
BstYI	RGATCY	2 cut(s)	457, 1615
BstZI	CGGCCG	1 cut(s)	1134
BtgI	CCRYGG	2 cut(s)	1719, 2130
BtrI	CACGTC	1 cut(s)	2083
BtsCI	GGATG	6 cut(s)	663, 699, 1041, 1127, 1572, 2262
BtsI	GCAGTG	3 cut(s)	79, 882, 1158
BtsIMutI	CAGTG	4 cut(s)	79, 882, 1158, 1867
BveI	ACCTGC	1 cut(s)	1278
Cac8I	GCNNGC	2 cut(s)	79, 2053
CaiI	CAGNNNCTG	1 cut(s)	1437
CciI	TCATGA	1 cut(s)	384
CfoI	GCGC	3 cut(s)	1295, 1384, 1389
Cfr10I	RCCGGY	4 cut(s)	1703, 1830, 1898, 1982
Cfr13I	GGNCC	7 cut(s)	449, 830, 1674, 1682, 1822, 2138, 2320
Cfr9I	CCCGGG	1 cut(s)	833
CseI	GACGC	1 cut(s)	1916
Csp6I	GTAC	4 cut(s)	353, 760, 1208, 2275
CspAI	ACCGGT	1 cut(s)	1703
CviAII	CATG	8 cut(s)	38, 299, 385, 610, 932, 1414, 1720, 2363
CviQI	GTAC	4 cut(s)	353, 760, 1208, 2275
DdeI	CTNAG	2 cut(s)	693, 2235
DpnI	GATC	6 cut(s)	459, 497, 615, 641, 800, 1617
DpnII	GATC	6 cut(s)	457, 495, 613, 639, 798, 1615
DraIII	CACNNNGTG	2 cut(s)	934, 2086
EaeI	YGGCCR	2 cut(s)	1134, 1643
EagI	CGGCCG	1 cut(s)	1134
Eam1104I	CTCTTC	6 cut(s)	155, 557, 814, 1224, 1251, 2058
EarI	CTCTTC	6 cut(s)	155, 557, 814, 1224, 1251, 2058
EciI	GGCGGA	3 cut(s)	1495, 1685, 1817
Ecl136II	GAGCTC	1 cut(s)	1357
EclXI	CGGCCG	1 cut(s)	1134
Eco130I	CCWWGG	2 cut(s)	106, 1719
Eco147I	AGGCCT	1 cut(s)	1635
Eco24I	GRGCYC	2 cut(s)	546, 1359
Eco31I	GGTCTC	3 cut(s)	322, 1471, 2344
Eco47I	GGWCC	4 cut(s)	449, 830, 1822, 2320
Eco52I	CGGCCG	1 cut(s)	1134
Eco53kI	GAGCTC	1 cut(s)	1357
Eco88I	CYCGRG	3 cut(s)	755, 833, 1343
EcoICRI	GAGCTC	1 cut(s)	1357
EcoO109I	RGGNCCY	3 cut(s)	449, 830, 2320
EcoRI	GAATTC	1 cut(s)	94
EcoRII	CCWGG	5 cut(s)	635, 942, 1044, 1068, 1575
EcoT14I	CCWWGG	2 cut(s)	106, 1719
EcoT38I	GRGCYC	2 cut(s)	546, 1359
ErhI	CCWWGG	2 cut(s)	106, 1719
Esp3I	CGTCTC	3 cut(s)	688, 1245, 1507
FaeI	CATG	8 cut(s)	41, 302, 388, 613, 935, 1417, 1723, 2366
FaqI	GGGAC	4 cut(s)	816, 1183, 1275, 2311
FatI	CATG	8 cut(s)	37, 298, 384, 609, 931, 1413, 1719, 2362
FauI	CCCGC	4 cut(s)	529, 634, 798, 2212
FblI	GTMKAC	1 cut(s)	1145
FokI	GGATG	6 cut(s)	650, 686, 1028, 1114, 1559, 2269
FriOI	GRGCYC	2 cut(s)	546, 1359
FspBI	CTAG	8 cut(s)	78, 588, 1097, 1427, 1730, 1772, 1994, 2126
GlaI	GCGC	3 cut(s)	1294, 1383, 1388
GsaI	CCCAGC	3 cut(s)	23, 448, 1190
GsuI	CTGGAG	1 cut(s)	2194
HgaI	GACGC	1 cut(s)	1916
HhaI	GCGC	3 cut(s)	1295, 1384, 1389
Hin1I	GRCGYC	4 cut(s)	389, 879, 1893, 1908
Hin1II	CATG	8 cut(s)	41, 302, 388, 613, 935, 1417, 1723, 2366
Hin6I	GCGC	3 cut(s)	1293, 1382, 1387
HinP1I	GCGC	3 cut(s)	1293, 1382, 1387
HindIII	AAGCTT	1 cut(s)	2306
Hpy166II	GTNNAC	5 cut(s)	1078, 1146, 1606, 1867, 2277
Hpy188III	TCNNGA	9 cut(s)	385, 393, 617, 703, 851, 1345, 1540, 1619, 1730
Hpy8I	GTNNAC	5 cut(s)	1078, 1146, 1606, 1867, 2277
Hpy99I	CGWCG	6 cut(s)	647, 1862, 1895, 1910, 2087, 2146
HpyAV	CCTTC	5 cut(s)	906, 1519, 1801, 2311, 2393
HpyCH4III	ACNGT	4 cut(s)	239, 607, 1957, 2060
HpyCH4IV	ACGT	7 cut(s)	389, 681, 708, 879, 1692, 1893, 2082
HpyF3I	CTNAG	2 cut(s)	693, 2235
HpySE526I	ACGT	7 cut(s)	389, 681, 708, 879, 1692, 1893, 2082
Hsp92I	GRCGYC	4 cut(s)	389, 879, 1893, 1908
Hsp92II	CATG	8 cut(s)	41, 302, 388, 613, 935, 1417, 1723, 2366
HspAI	GCGC	3 cut(s)	1293, 1382, 1387
Kzo9I	GATC	6 cut(s)	457, 495, 613, 639, 798, 1615
LweI	GCATC	2 cut(s)	657, 1224
MaeI	CTAG	8 cut(s)	78, 588, 1097, 1427, 1730, 1772, 1994, 2126
MaeII	ACGT	7 cut(s)	389, 681, 708, 879, 1692, 1893, 2082
MaeIII	GTNAC	7 cut(s)	23, 880, 914, 1338, 1894, 1951, 1976
MalI	GATC	6 cut(s)	459, 497, 615, 641, 800, 1617
MbiI	CCGCTC	2 cut(s)	771, 1475
MboI	GATC	6 cut(s)	457, 495, 613, 639, 798, 1615
MflI	RGATCY	2 cut(s)	457, 1615
MhlI	GDGCHC	3 cut(s)	546, 1359, 1608
MluCI	AATT	4 cut(s)	94, 216, 244, 370
MlyI	GAGTC	6 cut(s)	848, 1151, 1984, 2033, 2227, 2293
MmeI	TCCRAC	5 cut(s)	345, 390, 1029, 1929, 2294
MroXI	GAANNNNTTC	1 cut(s)	169
MseI	TTAA	2 cut(s)	1751, 2304
MslI	CAYNNNNRTG	4 cut(s)	335, 383, 930, 2282
MspA1I	CMGCKG	3 cut(s)	45, 844, 912
MspCI	CTTAAG	1 cut(s)	2303
MteI	GCGCNGCGC	1 cut(s)	1385
Mva1269I	GAATGC	2 cut(s)	1583, 1879
MvaI	CCWGG	5 cut(s)	637, 944, 1046, 1070, 1577
MvnI	CGCG	3 cut(s)	262, 1382, 1389
NcoI	CCATGG	1 cut(s)	1719
NdeII	GATC	6 cut(s)	457, 495, 613, 639, 798, 1615
NheI	GCTAGC	1 cut(s)	77
NlaIII	CATG	8 cut(s)	41, 302, 388, 613, 935, 1417, 1723, 2366
NlaIV	GGNNCC	8 cut(s)	450, 545, 832, 1375, 1714, 1824, 1903, 1941
NmeAIII	GCCGAG	2 cut(s)	1165, 2006
NmuCI	GTSAC	6 cut(s)	23, 880, 914, 1894, 1951, 1976
NspV	TTCGAA	1 cut(s)	1587
OliI	CACNNNNGTG	1 cut(s)	2282
PaeR7I	CTCGAG	2 cut(s)	755, 1343
PagI	TCATGA	1 cut(s)	384
PaqCI	CACCTGC	1 cut(s)	1278
PceI	AGGCCT	1 cut(s)	1635
PcsI	WCGNNNNNNNCGW	2 cut(s)	386, 1350
PctI	GAATGC	2 cut(s)	1583, 1879
PdmI	GAANNNNTTC	1 cut(s)	169
PfeI	GAWTC	6 cut(s)	481, 580, 847, 1446, 1527, 2113
PflFI	GACNNNGTC	1 cut(s)	38
PflMI	CCANNNNNTGG	1 cut(s)	636
PfoI	TCCNGGA	1 cut(s)	1575
PinAI	ACCGGT	1 cut(s)	1703
PleI	GAGTC	6 cut(s)	848, 1150, 1983, 2033, 2227, 2293
PpsI	GAGTC	6 cut(s)	848, 1150, 1983, 2033, 2227, 2293
PpuMI	RGGWCCY	3 cut(s)	449, 830, 2320
PshAI	GACNNNNGTC	1 cut(s)	1974
Psp124BI	GAGCTC	1 cut(s)	1359
Psp5II	RGGWCCY	3 cut(s)	449, 830, 2320
Psp6I	CCWGG	5 cut(s)	635, 942, 1044, 1068, 1575
PspFI	CCCAGC	3 cut(s)	19, 444, 1186
PspGI	CCWGG	5 cut(s)	635, 942, 1044, 1068, 1575
PspN4I	GGNNCC	8 cut(s)	450, 545, 832, 1375, 1714, 1824, 1903, 1941
PspPI	GGNCC	7 cut(s)	449, 830, 1674, 1682, 1822, 2138, 2320
PspPPI	RGGWCCY	3 cut(s)	449, 830, 2320
PspXI	VCTCGAGB	1 cut(s)	755
PstI	CTGCAG	3 cut(s)	843, 889, 1878
PstNI	CAGNNNCTG	1 cut(s)	1437
PsuI	RGATCY	2 cut(s)	457, 1615
PsyI	GACNNNGTC	1 cut(s)	38
PvuII	CAGCTG	1 cut(s)	844
RsaI	GTAC	4 cut(s)	354, 761, 1209, 2276
RsaNI	GTAC	4 cut(s)	353, 760, 1208, 2275
RseI	CAYNNNNRTG	4 cut(s)	335, 383, 930, 2282
SacI	GAGCTC	1 cut(s)	1359
SaqAI	TTAA	2 cut(s)	1751, 2304
Sau3AI	GATC	6 cut(s)	457, 495, 613, 639, 798, 1615
Sau96I	GGNCC	7 cut(s)	449, 830, 1674, 1682, 1822, 2138, 2320
SchI	GAGTC	6 cut(s)	848, 1151, 1984, 2033, 2227, 2293
SduI	GDGCHC	3 cut(s)	546, 1359, 1608
SfaNI	GCATC	2 cut(s)	657, 1224
SfcI	CTRYAG	4 cut(s)	453, 839, 885, 1874
SfiI	GGCCNNNNNGGCC	1 cut(s)	1681
Sfr274I	CTCGAG	2 cut(s)	755, 1343
SfuI	TTCGAA	1 cut(s)	1587
SinI	GGWCC	4 cut(s)	449, 830, 1822, 2320
SlaI	CTCGAG	2 cut(s)	755, 1343
SmaI	CCCGGG	1 cut(s)	835
SmiMI	CAYNNNNRTG	4 cut(s)	335, 383, 930, 2282
SmlI	CTYRAG	4 cut(s)	755, 1343, 1972, 2303
SmoI	CTYRAG	4 cut(s)	755, 1343, 1972, 2303
SpeI	ACTAGT	1 cut(s)	1426
Sse9I	AATT	4 cut(s)	94, 216, 244, 370
SseBI	AGGCCT	1 cut(s)	1635
SspMI	CTAG	8 cut(s)	78, 588, 1097, 1427, 1730, 1772, 1994, 2126
SstI	GAGCTC	1 cut(s)	1359
StuI	AGGCCT	1 cut(s)	1635
StyI	CCWWGG	2 cut(s)	106, 1719
TaaI	ACNGT	4 cut(s)	239, 607, 1957, 2060
TaiI	ACGT	7 cut(s)	392, 684, 711, 882, 1695, 1896, 2085
TaqII	GACCGA	1 cut(s)	132
TasI	AATT	4 cut(s)	94, 216, 244, 370
TauI	GCSGC	8 cut(s)	48, 503, 534, 787, 1139, 1240, 1397, 1687
TfiI	GAWTC	6 cut(s)	481, 580, 847, 1446, 1527, 2113
Tru1I	TTAA	2 cut(s)	1751, 2304
Tru9I	TTAA	2 cut(s)	1751, 2304
TscAI	CASTG	4 cut(s)	79, 889, 1165, 1874
TseFI	GTSAC	6 cut(s)	23, 880, 914, 1894, 1951, 1976
Tsp45I	GTSAC	6 cut(s)	23, 880, 914, 1894, 1951, 1976
TspDTI	ATGAA	2 cut(s)	953, 1977
TspGWI	ACGGA	2 cut(s)	1539, 1770
TspMI	CCCGGG	1 cut(s)	833
TspRI	CASTG	4 cut(s)	79, 889, 1165, 1874
Tth111I	GACNNNGTC	1 cut(s)	38
Van91I	CCANNNNNTGG	1 cut(s)	636
Vha464I	CTTAAG	1 cut(s)	2303
VneI	GTGCAC	1 cut(s)	1604
VpaK11BI	GGWCC	4 cut(s)	449, 830, 1822, 2320
XapI	RAATTY	1 cut(s)	94
XbaI	TCTAGA	1 cut(s)	1729
XhoI	CTCGAG	2 cut(s)	755, 1343
XmaI	CCCGGG	1 cut(s)	833
XmiI	GTMKAC	1 cut(s)	1145
XmnI	GAANNNNTTC	1 cut(s)	169
XspI	CTAG	8 cut(s)	78, 588, 1097, 1427, 1730, 1772, 1994, 2126
ZraI	GACGTC	3 cut(s)	390, 880, 1894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.