Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8482947.1

Orthogroup ID

OG0012813

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 1653

Gene Structure 1652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8482947.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1573 bp

atgtcgtcggtggcgccacccactctggagctccgagaattcaaccccacacgaccccgcgtcaaccctactctcgccgagcttctccagtgggtcgaacagtcccaaactcccgaccggaaaacaacgtcgtcaaaccacaacaatgtccaccacgtcctcgacctcgggtttccttccacctctttatctcagtcgacctaccctttcgtcctctccttcaacaatctcacttacagcgtcaaggtccggcgcaaaatgacattactgccctcattcagatcagcagaggctaaacttgggggtagcccaagcagcagcagcaccaaggttttgctgaacggcgtctccggcgaggccagagaaggccagatcatggcggttctcggagcgagtggctccggcaagtcgacgctgatagacgcattggctgatcggatcgccaaggacagcttgaaagggacggtcacattaaacaatgagattctcaactcgaggatgctgaaggtgatatcggcttacgtcatgcaggacgatctcttgtttccgatgctgacggtggaggagactctcatgttctccgccgagttccggctcccccggactctgtcgaaatccaagaagaagtctcgtgttcaggcccttattgatcaattaggtctccggaacgcctcgaagacggtgatcggagatgagggccaccgcggcgtctccggcggggagaggaggagagtttctattggtattgacatcattcacgacccgatagttttgtttctggacgagccgacctccgggcttgactcgacaagcgctttcatggtggtgaaggttttgcagagaatagctcagagtggtagtattgtggtgatgtccgtacatcaacccagttacaggattttggggttgttggaccggttggtacttctgtcacatggacagactgtgtacagtggctcgccggcgaatcttccaatctttttcggcgaattcggacaccctatacccgaaacggagaacaggaccgagttcgctctggacctcattcgagaattggaggaaactccaggtggaaccaagagcttggtggagttcaacaagtcatggcaagtcaccaagaggcaaaagcagaaagacgcaaatggttgcgacaacggttactgcagtatgccgaagctctcgctcaaagatgccataagtgcaagcatttcaaaaggaaagctagtctcgggtgctcccactgacactaacctcgcctcttcagtccctacatttgccaacccgatgtggatcgaaatgttggtgatctcgaaacgctcggtcacaaactcgagacggatgccggaactcttcggcattcgattgggggcggtactcgtcaccggaataatattagccactatgttttggcacctcgacgactcccccatgggtattgaagagcgccttggattttttgcctttgcaatgtccacgaccttttacacttgcgctgaagcaatccctattttcctccaagaacgatacatattcatgagagaaacagcctacaatgcataccgtcggtcatctt

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006810 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0010345 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044237 GO:0044249 GO:0044425 GO:0044464 GO:0044550 GO:0051179 GO:0051234 GO:0055085 GO:0071704 GO:0071944 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

524

Amino Acids

57.75

Weight (kDa)

9.23

Isoelectric Point (pI)

45.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37360 AT3G53510
fragaria_vesca	FvH4_6g14770
malus_domestica	MD04G1116300.v1.1 MD12G1132000.v1.1
prunus_persica	Prupe.6G246200_v2.0.a1
pyrus_communis	pycom04g10630 pycom12g12800
rosa_chinensis	RchiOBHm_Chr3g0467991
rosa_laevigata	RLG00000024461
rosa_multiflora	Rmu_co8482947.1_g000001
rosa_roxburghii	Rroxscaffold_6G00413230
rosa_rugosa	Rorug03G0090900
rosa_samantha	Rh3AG139700 Rh3BG161200 Rh3CG161100 Rh3DG161600
rosa_wichuraiana	Rw3G013210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	13, 1410
AccB7I	CCANNNNNTGG	1 cut(s)	376
AccI	GTMKAC	2 cut(s)	197, 410
AccII	CGCG	2 cut(s)	60, 705
AccIII	TCCGGA	1 cut(s)	663
AciI	CCGC	7 cut(s)	58, 380, 582, 703, 705, 717, 1370
AclWI	GGATC	2 cut(s)	446, 1298
AcsI	RAATTY	2 cut(s)	38, 989
AcuI	CTGAAG	3 cut(s)	524, 1245, 1515
AcyI	GRCGYC	3 cut(s)	14, 345, 708
AfaI	GTAC	4 cut(s)	879, 924, 950, 1374
AfeI	AGCGCT	1 cut(s)	814
AfiI	CCNNNNNNNGG	4 cut(s)	376, 591, 794, 894
AgeI	ACCGGT	1 cut(s)	915
AgsI	TTSAA	6 cut(s)	43, 223, 457, 1096, 1212, 1439
AhdI	GACNNNNNGTC	1 cut(s)	59
AjiI	CACGTC	1 cut(s)	157
AjnI	CCWGG	1 cut(s)	1066
AjuI	GAANNNNNNNTTGG	2 cut(s)	1431, 1463
AloI	GAACNNNNNNTCC	2 cut(s)	332, 364
AluBI	AGCT	7 cut(s)	31, 82, 453, 848, 1083, 1177, 1222
AluI	AGCT	7 cut(s)	31, 82, 453, 848, 1083, 1177, 1222
Alw21I	GWGCWC	2 cut(s)	33, 1237
Alw26I	GTCTC	7 cut(s)	352, 560, 633, 665, 715, 1231, 1327
AlwI	GGATC	2 cut(s)	446, 1298
Ama87I	CYCGRG	4 cut(s)	167, 493, 1228, 1330
Aor13HI	TCCGGA	1 cut(s)	663
Aor51HI	AGCGCT	1 cut(s)	814
AoxI	GGCC	4 cut(s)	357, 367, 639, 697
ApeKI	GCWGC	3 cut(s)	315, 318, 321
ApoI	RAATTY	2 cut(s)	38, 989
AsiGI	ACCGGT	1 cut(s)	915
AspLEI	GCGC	5 cut(s)	16, 255, 815, 1446, 1493
AspS9I	GGNCC	6 cut(s)	247, 640, 697, 913, 1023, 1039
AsuC2I	CCSGG	2 cut(s)	601, 796
AsuHPI	GGTGA	7 cut(s)	520, 694, 838, 880, 1105, 1315, 1372
AvaI	CYCGRG	4 cut(s)	167, 493, 1228, 1330
AvaII	GGWCC	4 cut(s)	247, 913, 1023, 1039
BaeI	ACNNNNGTAYC	2 cut(s)	914, 947
BanI	GGYRCC	2 cut(s)	13, 1410
BanII	GRGCYC	1 cut(s)	33
BauI	CACGAG	1 cut(s)	630
BbsI	GAAGAC	1 cut(s)	683
Bbv12I	GWGCWC	2 cut(s)	33, 1237
BbvI	GCAGC	3 cut(s)	327, 330, 333
BceAI	ACGGC	1 cut(s)	358
BcgI	CGANNNNNNTGC	2 cut(s)	1321, 1355
BciT130I	CCWGG	1 cut(s)	1068
BclI	TGATCA	1 cut(s)	649
BcnI	CCSGG	2 cut(s)	601, 796
BcoDI	GTCTC	7 cut(s)	352, 560, 633, 665, 715, 1231, 1327
BfaI	CTAG	1 cut(s)	1223
BfmI	CTRYAG	1 cut(s)	1162
BfoI	RGCGCY	3 cut(s)	17, 816, 1447
BglI	GCCNNNNNGGC	1 cut(s)	705
BisI	GCNGC	4 cut(s)	316, 319, 322, 706
BlsI	GCNGC	4 cut(s)	317, 320, 323, 707
Bme1390I	CCNGG	3 cut(s)	601, 796, 1068
Bme18I	GGWCC	4 cut(s)	247, 913, 1023, 1039
BmeRI	GACNNNNNGTC	1 cut(s)	59
BmeT110I	CYCGRG	4 cut(s)	167, 493, 1228, 1330
BmgBI	CACGTC	1 cut(s)	157
BmgT120I	GGNCC	6 cut(s)	247, 640, 697, 913, 1023, 1039
BmiI	GGNNCC	5 cut(s)	15, 400, 596, 1075, 1412
BmrFI	CCNGG	3 cut(s)	601, 796, 1068
BmrI	ACTGGG	1 cut(s)	882
BmsI	GCATC	4 cut(s)	489, 540, 1180, 1329
BmuI	ACTGGG	1 cut(s)	882
BpiI	GAAGAC	1 cut(s)	683
BplI	GAGNNNNNCTC	4 cut(s)	776, 808, 832, 864
BpmI	CTGGAG	3 cut(s)	47, 71, 1050
BpuMI	CCSGG	2 cut(s)	601, 796
BsaBI	GATNNNNATC	1 cut(s)	1289
BsaHI	GRCGYC	3 cut(s)	14, 345, 708
BsaI	GGTCTC	1 cut(s)	665
BsaJI	CCNNGG	7 cut(s)	166, 327, 444, 599, 703, 1428, 1447
BsaWI	WCCGGW	4 cut(s)	117, 663, 915, 1382
BsaXI	ACNNNNNCTCC	2 cut(s)	332, 362
Bsc4I	CCNNNNNNNGG	4 cut(s)	376, 591, 794, 894
Bse118I	RCCGGY	2 cut(s)	915, 961
Bse1I	ACTGG	2 cut(s)	88, 888
Bse3DI	GCAATG	1 cut(s)	1473
Bse8I	GATNNNNATC	1 cut(s)	1289
BseAI	TCCGGA	1 cut(s)	663
BseBI	CCWGG	1 cut(s)	1068
BseDI	CCNNGG	7 cut(s)	166, 327, 444, 599, 703, 1428, 1447
BseGI	GGATG	2 cut(s)	504, 1344
BseJI	GATNNNNATC	1 cut(s)	1289
BseLI	CCNNNNNNNGG	4 cut(s)	376, 591, 794, 894
BseMI	GCAATG	1 cut(s)	1473
BseMII	CTCAG	2 cut(s)	206, 863
BseNI	ACTGG	2 cut(s)	88, 888
BseRI	GAGGAG	3 cut(s)	578, 739, 742
BseXI	GCAGC	3 cut(s)	327, 330, 333
Bsh1236I	CGCG	2 cut(s)	60, 705
Bsh1285I	CGRYCG	1 cut(s)	118
BshFI	GGCC	4 cut(s)	359, 369, 641, 699
BshNI	GGYRCC	2 cut(s)	13, 1410
BshTI	ACCGGT	1 cut(s)	915
BsiEI	CGRYCG	1 cut(s)	118
BsiHKAI	GWGCWC	2 cut(s)	33, 1237
BsiHKCI	CYCGRG	4 cut(s)	167, 493, 1228, 1330
BslFI	GGGAC	3 cut(s)	88, 475, 1250
BslI	CCNNNNNNNGG	4 cut(s)	376, 591, 794, 894
BsmAI	GTCTC	7 cut(s)	352, 560, 633, 665, 715, 1231, 1327
BsmBI	CGTCTC	3 cut(s)	352, 715, 1327
BsmFI	GGGAC	3 cut(s)	88, 475, 1250
BsmI	GAATGC	1 cut(s)	1356
BsnI	GGCC	4 cut(s)	359, 369, 641, 699
Bso31I	GGTCTC	1 cut(s)	665
BsoBI	CYCGRG	4 cut(s)	167, 493, 1228, 1330
Bsp1286I	GDGCHC	2 cut(s)	33, 1237
Bsp13I	TCCGGA	1 cut(s)	663
Bsp1407I	TGTACA	1 cut(s)	948
Bsp143I	GATC	9 cut(s)	281, 372, 433, 438, 535, 649, 684, 1290, 1305
Bsp19I	CCATGG	1 cut(s)	1428
BspACI	CCGC	7 cut(s)	58, 380, 582, 703, 705, 717, 1370
BspANI	GGCC	4 cut(s)	359, 369, 641, 699
BspCNI	CTCAG	2 cut(s)	205, 862
BspEI	TCCGGA	1 cut(s)	663
BspFNI	CGCG	2 cut(s)	60, 705
BspHI	TCATGA	1 cut(s)	1533
BspLI	GGNNCC	5 cut(s)	15, 400, 596, 1075, 1412
BspMAI	CTGCAG	1 cut(s)	1166
BspPI	GGATC	2 cut(s)	446, 1298
BspQI	GCTCTTC	1 cut(s)	1434
BspT107I	GGYRCC	2 cut(s)	13, 1410
BspTNI	GGTCTC	1 cut(s)	665
BsrDI	GCAATG	1 cut(s)	1473
BsrFI	RCCGGY	2 cut(s)	915, 961
BsrGI	TGTACA	1 cut(s)	948
BsrI	ACTGG	2 cut(s)	88, 888
BssAI	RCCGGY	2 cut(s)	915, 961
BssECI	CCNNGG	7 cut(s)	166, 327, 444, 599, 703, 1428, 1447
BssMI	GATC	9 cut(s)	281, 372, 433, 438, 535, 649, 684, 1290, 1305
BssNI	GRCGYC	3 cut(s)	14, 345, 708
BssSI	CACGAG	1 cut(s)	630
BssT1I	CCWWGG	4 cut(s)	327, 444, 1428, 1447
Bst2BI	CACGAG	1 cut(s)	630
Bst2UI	CCWGG	1 cut(s)	1068
Bst4CI	ACNGT	8 cut(s)	102, 466, 559, 682, 946, 953, 1157, 1562
Bst6I	CTCTTC	3 cut(s)	1264, 1355, 1434
BstACI	GRCGYC	3 cut(s)	14, 345, 708
BstAUI	TGTACA	1 cut(s)	948
BstC8I	GCNNGC	3 cut(s)	959, 963, 1204
BstDEI	CTNAG	2 cut(s)	192, 849
BstDSI	CCRYGG	2 cut(s)	703, 1428
BstF5I	GGATG	2 cut(s)	504, 1344
BstFNI	CGCG	2 cut(s)	60, 705
BstH2I	RGCGCY	3 cut(s)	17, 816, 1447
BstHHI	GCGC	5 cut(s)	16, 255, 815, 1446, 1493
BstKTI	GATC	9 cut(s)	284, 375, 436, 441, 538, 652, 687, 1293, 1308
BstMAI	GTCTC	7 cut(s)	352, 560, 633, 665, 715, 1231, 1327
BstMBI	GATC	9 cut(s)	281, 372, 433, 438, 535, 649, 684, 1290, 1305
BstMCI	CGRYCG	1 cut(s)	118
BstMWI	GCNNNNNNNGC	7 cut(s)	315, 321, 351, 705, 714, 1199, 1553
BstNI	CCWGG	1 cut(s)	1068
BstSCI	CCNGG	3 cut(s)	599, 794, 1066
BstSFI	CTRYAG	1 cut(s)	1162
BstUI	CGCG	2 cut(s)	60, 705
BstV1I	GCAGC	3 cut(s)	327, 330, 333
BstV2I	GAAGAC	1 cut(s)	683
BstXI	CCANNNNNNTGG	1 cut(s)	1084
BsuRI	GGCC	4 cut(s)	359, 369, 641, 699
BtgI	CCRYGG	2 cut(s)	703, 1428
BtrI	CACGTC	1 cut(s)	157
BtsCI	GGATG	2 cut(s)	504, 1344
BtsIMutI	CAGTG	3 cut(s)	95, 958, 1239
Cac8I	GCNNGC	3 cut(s)	959, 963, 1204
CciI	TCATGA	1 cut(s)	1533
CfoI	GCGC	5 cut(s)	16, 255, 815, 1446, 1493
Cfr10I	RCCGGY	2 cut(s)	915, 961
Cfr13I	GGNCC	6 cut(s)	247, 640, 697, 913, 1023, 1039
Cfr42I	CCGCGG	1 cut(s)	706
CseI	GACGC	7 cut(s)	49, 229, 334, 421, 431, 697, 1145
Csp6I	GTAC	4 cut(s)	878, 923, 949, 1373
CspAI	ACCGGT	1 cut(s)	915
CviAII	CATG	8 cut(s)	376, 526, 574, 820, 935, 1104, 1429, 1534
CviQI	GTAC	4 cut(s)	878, 923, 949, 1373
DdeI	CTNAG	2 cut(s)	192, 849
DinI	GGCGCC	1 cut(s)	15
DpnI	GATC	9 cut(s)	283, 374, 435, 440, 537, 651, 686, 1292, 1307
DpnII	GATC	9 cut(s)	281, 372, 433, 438, 535, 649, 684, 1290, 1305
DriI	GACNNNNNGTC	1 cut(s)	59
Eam1104I	CTCTTC	3 cut(s)	1264, 1355, 1434
Eam1105I	GACNNNNNGTC	1 cut(s)	59
EarI	CTCTTC	3 cut(s)	1264, 1355, 1434
EciI	GGCGGA	1 cut(s)	571
Ecl136II	GAGCTC	1 cut(s)	31
Eco130I	CCWWGG	4 cut(s)	327, 444, 1428, 1447
Eco24I	GRGCYC	1 cut(s)	33
Eco31I	GGTCTC	1 cut(s)	665
Eco32I	GATATC	1 cut(s)	513
Eco47I	GGWCC	4 cut(s)	247, 913, 1023, 1039
Eco47III	AGCGCT	1 cut(s)	814
Eco53kI	GAGCTC	1 cut(s)	31
Eco57I	CTGAAG	3 cut(s)	524, 1245, 1515
Eco88I	CYCGRG	4 cut(s)	167, 493, 1228, 1330
EcoICRI	GAGCTC	1 cut(s)	31
EcoO109I	RGGNCCY	1 cut(s)	640
EcoRI	GAATTC	2 cut(s)	38, 989
EcoRII	CCWGG	1 cut(s)	1066
EcoRV	GATATC	1 cut(s)	513
EcoT14I	CCWWGG	4 cut(s)	327, 444, 1428, 1447
EcoT22I	ATGCAT	1 cut(s)	1558
EcoT38I	GRGCYC	1 cut(s)	33
EgeI	GGCGCC	1 cut(s)	15
EheI	GGCGCC	1 cut(s)	15
ErhI	CCWWGG	4 cut(s)	327, 444, 1428, 1447
Esp3I	CGTCTC	3 cut(s)	352, 715, 1327
FaeI	CATG	8 cut(s)	379, 529, 577, 823, 938, 1107, 1432, 1537
FalI	AAGNNNNNCTT	4 cut(s)	437, 469, 1431, 1463
FaqI	GGGAC	3 cut(s)	88, 475, 1250
FatI	CATG	8 cut(s)	375, 525, 573, 819, 934, 1103, 1428, 1533
FauI	CCCGC	2 cut(s)	65, 710
FbaI	TGATCA	1 cut(s)	649
FblI	GTMKAC	2 cut(s)	197, 410
Fnu4HI	GCNGC	4 cut(s)	316, 319, 322, 706
FokI	GGATG	2 cut(s)	511, 1351
FriOI	GRGCYC	1 cut(s)	33
Fsp4HI	GCNGC	4 cut(s)	316, 319, 322, 706
FspBI	CTAG	1 cut(s)	1223
GlaI	GCGC	5 cut(s)	15, 254, 814, 1445, 1492
GluI	GCNGC	4 cut(s)	316, 319, 322, 706
GsuI	CTGGAG	3 cut(s)	47, 71, 1050
HaeII	RGCGCY	3 cut(s)	17, 816, 1447
HaeIII	GGCC	4 cut(s)	359, 369, 641, 699
HgaI	GACGC	7 cut(s)	49, 229, 334, 421, 431, 697, 1145
HhaI	GCGC	5 cut(s)	16, 255, 815, 1446, 1493
Hin1I	GRCGYC	3 cut(s)	14, 345, 708
Hin1II	CATG	8 cut(s)	379, 529, 577, 823, 938, 1107, 1432, 1537
Hin6I	GCGC	5 cut(s)	14, 253, 813, 1444, 1491
HinP1I	GCGC	5 cut(s)	14, 253, 813, 1444, 1491
HincII	GTYRAC	3 cut(s)	64, 198, 411
HindII	GTYRAC	3 cut(s)	64, 198, 411
HinfI	GANTC	6 cut(s)	484, 568, 604, 803, 967, 1421
HphI	GGTGA	7 cut(s)	520, 694, 838, 880, 1105, 1315, 1372
Hpy166II	GTNNAC	6 cut(s)	64, 151, 198, 411, 949, 1473
Hpy188I	TCNGA	8 cut(s)	35, 281, 389, 438, 549, 689, 852, 995
Hpy8I	GTNNAC	6 cut(s)	64, 151, 198, 411, 949, 1473
Hpy99I	CGWCG	5 cut(s)	10, 133, 415, 1421, 1566
HpyAV	CCTTC	5 cut(s)	186, 229, 359, 499, 823
HpyCH4III	ACNGT	8 cut(s)	102, 466, 559, 682, 946, 953, 1157, 1562
HpyCH4IV	ACGT	3 cut(s)	128, 156, 522
HpyCH4V	TGCA	6 cut(s)	529, 838, 1164, 1202, 1466, 1556
HpyF10VI	GCNNNNNNNGC	7 cut(s)	315, 321, 351, 705, 714, 1199, 1553
HpyF3I	CTNAG	2 cut(s)	192, 849
HpySE526I	ACGT	3 cut(s)	128, 156, 522
Hsp92I	GRCGYC	3 cut(s)	14, 345, 708
Hsp92II	CATG	8 cut(s)	379, 529, 577, 823, 938, 1107, 1432, 1537
HspAI	GCGC	5 cut(s)	14, 253, 813, 1444, 1491
KasI	GGCGCC	1 cut(s)	13
Kpn2I	TCCGGA	1 cut(s)	663
KroI	GCCGGC	1 cut(s)	961
KroNI	GCCGGC	1 cut(s)	963
Ksp22I	TGATCA	1 cut(s)	649
KspI	CCGCGG	1 cut(s)	706
Kzo9I	GATC	9 cut(s)	281, 372, 433, 438, 535, 649, 684, 1290, 1305
LguI	GCTCTTC	1 cut(s)	1434
LmnI	GCTCC	6 cut(s)	28, 36, 389, 404, 600, 1240
Lsp1109I	GCAGC	3 cut(s)	327, 330, 333
LweI	GCATC	4 cut(s)	489, 540, 1180, 1329
MaeI	CTAG	1 cut(s)	1223
MaeII	ACGT	3 cut(s)	128, 156, 522
MaeIII	GTNAC	7 cut(s)	466, 890, 930, 1111, 1157, 1321, 1378
MalI	GATC	9 cut(s)	283, 374, 435, 440, 537, 651, 686, 1292, 1307
MboI	GATC	9 cut(s)	281, 372, 433, 438, 535, 649, 684, 1290, 1305
MboII	GAAGA	6 cut(s)	634, 688, 962, 1251, 1342, 1451
MhlI	GDGCHC	2 cut(s)	33, 1237
MluCI	AATT	4 cut(s)	38, 653, 989, 1052
Mly113I	GGCGCC	1 cut(s)	14
MlyI	GAGTC	4 cut(s)	562, 598, 797, 1415
MmeI	TCCRAC	1 cut(s)	891
Mph1103I	ATGCAT	1 cut(s)	1558
MreI	CGCCGGCG	1 cut(s)	961
MroI	TCCGGA	1 cut(s)	663
MroNI	GCCGGC	1 cut(s)	961
MseI	TTAA	1 cut(s)	473
MslI	CAYNNNNRTG	3 cut(s)	144, 824, 1532
MspA1I	CMGCKG	1 cut(s)	705
MspR9I	CCNGG	3 cut(s)	601, 796, 1068
Mva1269I	GAATGC	1 cut(s)	1356
MvaI	CCWGG	1 cut(s)	1068
MvnI	CGCG	2 cut(s)	60, 705
MwoI	GCNNNNNNNGC	7 cut(s)	315, 321, 351, 705, 714, 1199, 1553
NaeI	GCCGGC	1 cut(s)	963
NarI	GGCGCC	1 cut(s)	14
NciI	CCSGG	2 cut(s)	601, 796
NcoI	CCATGG	1 cut(s)	1428
NdeII	GATC	9 cut(s)	281, 372, 433, 438, 535, 649, 684, 1290, 1305
NgoMIV	GCCGGC	1 cut(s)	961
NlaIII	CATG	8 cut(s)	379, 529, 577, 823, 938, 1107, 1432, 1537
NlaIV	GGNNCC	5 cut(s)	15, 400, 596, 1075, 1412
NmeAIII	GCCGAG	2 cut(s)	103, 610
NmuCI	GTSAC	5 cut(s)	466, 930, 1111, 1321, 1378
NsiI	ATGCAT	1 cut(s)	1558
PaeR7I	CTCGAG	2 cut(s)	493, 1330
PagI	TCATGA	1 cut(s)	1533
PciSI	GCTCTTC	1 cut(s)	1434
PctI	GAATGC	1 cut(s)	1356
PdiI	GCCGGC	1 cut(s)	963
PfeI	GAWTC	2 cut(s)	484, 967
PflFI	GACNNNGTC	1 cut(s)	607
PflMI	CCANNNNNTGG	1 cut(s)	376
PinAI	ACCGGT	1 cut(s)	915
PkrI	GCNGC	4 cut(s)	317, 320, 323, 707
PleI	GAGTC	4 cut(s)	562, 598, 797, 1415
PluTI	GGCGCC	1 cut(s)	17
PpsI	GAGTC	4 cut(s)	562, 598, 797, 1415
Psp124BI	GAGCTC	1 cut(s)	33
Psp6I	CCWGG	1 cut(s)	1066
PspGI	CCWGG	1 cut(s)	1066
PspN4I	GGNNCC	5 cut(s)	15, 400, 596, 1075, 1412
PspPI	GGNCC	6 cut(s)	247, 640, 697, 913, 1023, 1039
PspXI	VCTCGAGB	1 cut(s)	493
PstI	CTGCAG	1 cut(s)	1166
PsyI	GACNNNGTC	1 cut(s)	607
RsaI	GTAC	4 cut(s)	879, 924, 950, 1374
RsaNI	GTAC	4 cut(s)	878, 923, 949, 1373
RseI	CAYNNNNRTG	3 cut(s)	144, 824, 1532
SacI	GAGCTC	1 cut(s)	33
SacII	CCGCGG	1 cut(s)	706
SalI	GTCGAC	2 cut(s)	196, 409
SapI	GCTCTTC	1 cut(s)	1434
SaqAI	TTAA	1 cut(s)	473
SatI	GCNGC	4 cut(s)	316, 319, 322, 706
Sau3AI	GATC	9 cut(s)	281, 372, 433, 438, 535, 649, 684, 1290, 1305
Sau96I	GGNCC	6 cut(s)	247, 640, 697, 913, 1023, 1039
SchI	GAGTC	4 cut(s)	562, 598, 797, 1415
ScrFI	CCNGG	3 cut(s)	601, 796, 1068
SduI	GDGCHC	2 cut(s)	33, 1237
SfaNI	GCATC	4 cut(s)	489, 540, 1180, 1329
SfcI	CTRYAG	1 cut(s)	1162
SfoI	GGCGCC	1 cut(s)	15
Sfr274I	CTCGAG	2 cut(s)	493, 1330
Sfr303I	CCGCGG	1 cut(s)	706
SgrAI	CRCCGGYG	1 cut(s)	961
SgrBI	CCGCGG	1 cut(s)	706
SinI	GGWCC	4 cut(s)	247, 913, 1023, 1039
SlaI	CTCGAG	2 cut(s)	493, 1330
SmiMI	CAYNNNNRTG	3 cut(s)	144, 824, 1532
SmlI	CTYRAG	2 cut(s)	493, 1330
SmoI	CTYRAG	2 cut(s)	493, 1330
Sse9I	AATT	4 cut(s)	38, 653, 989, 1052
SsiI	CCGC	7 cut(s)	58, 380, 582, 703, 705, 717, 1370
SspDI	GGCGCC	1 cut(s)	13
SspI	AATATT	1 cut(s)	1392
SspMI	CTAG	1 cut(s)	1223
SstI	GAGCTC	1 cut(s)	33
StyD4I	CCNGG	3 cut(s)	599, 794, 1066
StyI	CCWWGG	4 cut(s)	327, 444, 1428, 1447
TaaI	ACNGT	8 cut(s)	102, 466, 559, 682, 946, 953, 1157, 1562
TaiI	ACGT	3 cut(s)	131, 159, 525
TaqII	GACCGA	3 cut(s)	1040, 1309, 1554
TasI	AATT	4 cut(s)	38, 653, 989, 1052
TatI	WGTACW	1 cut(s)	948
TauI	GCSGC	1 cut(s)	708
TfiI	GAWTC	2 cut(s)	484, 967
Tru1I	TTAA	1 cut(s)	473
Tru9I	TTAA	1 cut(s)	473
TscAI	CASTG	3 cut(s)	95, 958, 1246
TseFI	GTSAC	5 cut(s)	466, 930, 1111, 1321, 1378
TseI	GCWGC	3 cut(s)	315, 318, 321
Tsp45I	GTSAC	5 cut(s)	466, 930, 1111, 1321, 1378
TspDTI	ATGAA	2 cut(s)	808, 1522
TspGWI	ACGGA	3 cut(s)	865, 1028, 1351
TspRI	CASTG	3 cut(s)	95, 958, 1246
Tth111I	GACNNNGTC	1 cut(s)	607
Van91I	CCANNNNNTGG	1 cut(s)	376
VpaK11BI	GGWCC	4 cut(s)	247, 913, 1023, 1039
XapI	RAATTY	2 cut(s)	38, 989
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1084
XhoI	CTCGAG	2 cut(s)	493, 1330
XmiI	GTMKAC	2 cut(s)	197, 410
XspI	CTAG	1 cut(s)	1223
Zsp2I	ATGCAT	1 cut(s)	1558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.