Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0012813

Physical Location & Seq

Genomic Coordinates Forward (+)

9169680 .. 9172512

Gene Structure 2833 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g14770.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGTCGTCTGCGGCGCCACCCACTCTCGAGCTCCGAGAATTCAACCCCACAAGACCCCGCATCAACCCTACTCTCGCCGAGCTTCTCCAATGGGTCGAGCAGTCCCAAACCCCCGACCGGAAAACTACGTCGTCAAACCACAACAATGCCCACCACGTCCTCGACATCGGCTTTCCTTCCACCTCTTTGTCTCAGTCGACCTACCCTTTCGTCCTCTCCTTCAACAACCTCACTTACAGCGTCAAGGTCCGCCGCAAAATGACGTTACTGCCCTCCTTCAGAAAAACAGAGGCTAAACTTGGTGGCAGCGGCGCAAGCAGCACCAAGGTTTTGCTGAACGGCGTTTCCGGCGAGGCCAGAGAAGGCCAGATCATGGCGGTTCTCGGAGCAAGTGGCTCAGGCAAGTCAACACTGATAGACGCATTGGCTGACCGGATCGCCAAGGACAGCTTGAAAGGGACGATCACGTTAAACGATGAGATTCTCAACTCGAGGATGCTGAAGGTGATATCGGCTTACGTCATGCAGGACGATCTGTTGTTTCCGATGCTGACGGTGGAGGAGACTCTCATGTTCTCTGCTGAGTTCCGGCTCCCACAGTCTCTATCAAAATCAAAGAAGAAGTCTCGTGTGGAGGCCCTGATTGATCAGCTAGGCCTCCGAAACGCCGCGAAGACGGTGATCGGTGATGAGGGCCACCGCGGCGTCTCCGGAGGCGAGAGGAGGAGAGTTTCTATTGGTATTGACATCATTCACGACCCCATTGTTTTGTTTCTTGACGAACCGACCTCCGGGCTTGACTCGACGAGTGCTTTCATGGTGGTGAAGGTTTTGCAGAGAATAGCTCAGAGTGGCAGCATTGTGGTCATGTCCGTACATCAACCGAGTTACAGAATTCTAGGGTTGTTGGACAGGTTGGTACTTCTGTCACATGGACAGACTGTGTACAGTGGCTCGCCGGCGAATCTTCCGGTCTTTTTCCGCGAATTCGGGCACCCTATACCCGAAACCGAGAACAGGACTGAGTTCGCTTTGGACCTCATTCGAGAACTGGAAGAAACTCCAGGTGGAACCAAGAGCTTGGTAGAGTTCAACAAGAAATGGCAAATCACCAAGAGGCAGAAGTTCAAACAAGCAAACGGTTCGGACAACAGTGCCAGCAGTATGCCAAAGCTCTCGCTCAAAGACGCAATAAGTGCTAGCATTTCAAGAGGAAAGCTAGTCTCGGGTGCTCCTAGTGACACTAACCTAGCCTCTTCAGTCCCTACCTTTGCCAACCCTATATGGACAGAAATGTTGGTCATCTCAAAACGCTCCATCAAAAACTCTACACGAATGCCGGAACTCTTCGGCATCCGGTTGGGGGCGGTACTCGTCACCGGAATCATATTAGCCACTATGTTTTGGCACCTTGACGACTCCCCCAAGGGTGTCGAAGAGCGTCTCGGATTTTTCGCCTTTGCAATGTCCACAACCTTCTACACTTGCGCGGAAGCAATCCCCGTTTTCCTCCAAGAACGTTACATATTCATGAGAGAAACTGCCTACAATGCCTACCGTAGGTCATCTTATGTCTTAGCTCACTCGTTACTCTCCATTCCCTCCTTGCTCATCCTCTCCTTGGCCTTCGCCGCCACCACCTTTTGGGCCGTGGGGTTGGCCGGTGGCCTTCAAGGGTTTCTCTTTTTCTTGTTGACAATATGCTCGGCGTTTTGGGCCGGATCTTCGTTCGTAACATTTTTATCCGGCGTTGTCACCCATGTCATGCTGGGATATACGGTTGTGGTGGCCATTCTAGCCTACTTTCTCCTCTTTAGTGGGTTCTTCATTAGCAGAGATCGGATTCCGGTATACTGGATTTGGTTCCATTACATATCTCTGGTGAAGTATCCATATGAAGCTGTTTTGCAGAACGAGTTTGATGACCATATGAAGTGTTTAGTGACCGGAATTCAAATGTTTGACAACACGCCGTTGGGTGACGTCCCTGTTGCACTGAAGTTGAAGCTGTTGGAGAACATGAGCAACACATTGGGGATGAATGTAACTGCGTCTAGTTGTGTGACCACCGGATTAGACATACTGAAACGGCAGGGTATAACGGATATTAGCAAATGGAATTGCTTGTGGGTGACAATTGCTTGGGGGTTTTTCTTTAGAGTTTTGTTTTATTTTACTTTGTTGTTGGGGAGCAAAAATAAAAGGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006810 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0010345 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044237 GO:0044249 GO:0044425 GO:0044464 GO:0044550 GO:0051179 GO:0051234 GO:0055085 GO:0071704 GO:0071944 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

737

Amino Acids

81.58

Weight (kDa)

9.34

Isoelectric Point (pI)

40.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	112 - 264	2.6e-26	ABC transporter
ABC2_membrane_7	PF19055	293 - 372	7e-06	ABC-2 type transporter
ABC2_membrane	PF01061	432 - 640	1.9e-47	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37360 AT3G53510
fragaria_vesca	FvH4_6g14770
malus_domestica	MD04G1116300.v1.1 MD12G1132000.v1.1
prunus_persica	Prupe.6G246200_v2.0.a1
pyrus_communis	pycom04g10630 pycom12g12800
rosa_chinensis	RchiOBHm_Chr3g0467991
rosa_laevigata	RLG00000024461
rosa_multiflora	Rmu_co8482947.1_g000001
rosa_roxburghii	Rroxscaffold_6G00413230
rosa_rugosa	Rorug03G0090900
rosa_samantha	Rh3AG139700 Rh3BG161200 Rh3CG161100 Rh3DG161600
rosa_wichuraiana	Rw3G013210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1986
AccB1I	GGYRCC	3 cut(s)	13, 993, 1407
AccB7I	CCANNNNNTGG	2 cut(s)	373, 1644
AccI	GTMKAC	2 cut(s)	197, 1851
AccII	CGCG	4 cut(s)	671, 702, 984, 1490
AccIII	TCCGGA	1 cut(s)	710
AclI	AACGTT	1 cut(s)	1519
AclWI	GGATC	2 cut(s)	443, 1729
AcoI	YGGCCR	2 cut(s)	1659, 1788
AcsI	RAATTY	4 cut(s)	38, 894, 986, 1950
AcuI	CTGAAG	4 cut(s)	262, 521, 1242, 2018
AcyI	GRCGYC	3 cut(s)	14, 705, 1983
AfaI	GTAC	4 cut(s)	876, 921, 947, 1371
AfiI	CCNNNNNNNGG	8 cut(s)	117, 373, 791, 1017, 1363, 1560, 1621, 1644
AgsI	TTSAA	9 cut(s)	43, 223, 454, 1093, 1129, 1209, 1673, 1955, 2005
AjiI	CACGTC	1 cut(s)	157
AjnI	CCWGG	1 cut(s)	1063
AloI	GAACNNNNNNTCC	2 cut(s)	329, 361
Alw21I	GWGCWC	2 cut(s)	33, 1234
Alw26I	GTCTC	7 cut(s)	195, 557, 606, 630, 712, 1228, 1448
AlwI	GGATC	2 cut(s)	443, 1729
Ama87I	CYCGRG	3 cut(s)	26, 490, 1225
Aor13HI	TCCGGA	1 cut(s)	710
ApeKI	GCWGC	3 cut(s)	306, 318, 855
ApoI	RAATTY	4 cut(s)	38, 894, 986, 1950
ArsI	GACNNNNNNTTYG	2 cut(s)	608, 640
AspLEI	GCGC	3 cut(s)	16, 314, 1490
AspS9I	GGNCC	6 cut(s)	247, 637, 694, 1036, 1647, 1716
AsuC2I	CCSGG	1 cut(s)	793
AsuNHI	GCTAGC	1 cut(s)	1199
AvaI	CYCGRG	3 cut(s)	26, 490, 1225
AvaII	GGWCC	2 cut(s)	247, 1036
BaeGI	GKGCMC	1 cut(s)	996
BaeI	ACNNNNGTAYC	2 cut(s)	911, 944
BalI	TGGCCA	1 cut(s)	1790
BanI	GGYRCC	3 cut(s)	13, 993, 1407
BanII	GRGCYC	1 cut(s)	33
BauI	CACGAG	1 cut(s)	627
BbsI	GAAGAC	1 cut(s)	680
Bbv12I	GWGCWC	2 cut(s)	33, 1234
BbvI	GCAGC	3 cut(s)	318, 330, 867
BccI	CCATC	1 cut(s)	1325
BceAI	ACGGC	4 cut(s)	355, 1634, 1957, 2105
BcgI	CGANNNNNNTGC	2 cut(s)	1125, 1159
BciT130I	CCWGG	1 cut(s)	1065
BciVI	GTATCC	1 cut(s)	1899
BclI	TGATCA	1 cut(s)	646
BcnI	CCSGG	1 cut(s)	793
BcoDI	GTCTC	7 cut(s)	195, 557, 606, 630, 712, 1228, 1448
BfaI	CTAG	8 cut(s)	653, 899, 1200, 1220, 1236, 1250, 1796, 2055
BfoI	RGCGCY	1 cut(s)	17
BfuI	GTATCC	1 cut(s)	1899
BglI	GCCNNNNNGGC	1 cut(s)	702
BisI	GCNGC	9 cut(s)	12, 253, 307, 310, 319, 669, 703, 856, 1632
BlsI	GCNGC	9 cut(s)	13, 254, 308, 311, 320, 670, 704, 857, 1633
Bme1390I	CCNGG	2 cut(s)	793, 1065
Bme18I	GGWCC	2 cut(s)	247, 1036
BmeT110I	CYCGRG	3 cut(s)	26, 490, 1225
BmgBI	CACGTC	1 cut(s)	157
BmgT120I	GGNCC	6 cut(s)	247, 637, 694, 1036, 1647, 1716
BmiI	GGNNCC	6 cut(s)	15, 593, 995, 1072, 1409, 1865
BmrFI	CCNGG	2 cut(s)	793, 1065
BmsI	GCATC	4 cut(s)	69, 486, 537, 1362
BmtI	GCTAGC	1 cut(s)	1203
BpiI	GAAGAC	1 cut(s)	680
BplI	GAGNNNNNCTC	2 cut(s)	829, 861
BpmI	CTGGAG	1 cut(s)	1047
Bpu10I	CCTNAGC	1 cut(s)	397
BpuMI	CCSGG	1 cut(s)	793
BsaHI	GRCGYC	3 cut(s)	14, 705, 1983
BsaJI	CCNNGG	6 cut(s)	324, 441, 700, 1425, 1620, 1650
BsaWI	WCCGGW	9 cut(s)	117, 432, 710, 970, 1356, 1379, 1846, 1946, 2069
Bsc4I	CCNNNNNNNGG	8 cut(s)	117, 373, 791, 1017, 1363, 1560, 1621, 1644
Bse118I	RCCGGY	2 cut(s)	958, 1661
Bse1I	ACTGG	2 cut(s)	1056, 1859
Bse3DI	GCAATG	1 cut(s)	1470
BseAI	TCCGGA	1 cut(s)	710
BseBI	CCWGG	1 cut(s)	1065
BseDI	CCNNGG	6 cut(s)	324, 441, 700, 1425, 1620, 1650
BseGI	GGATG	4 cut(s)	501, 1353, 1611, 2043
BseLI	CCNNNNNNNGG	8 cut(s)	117, 373, 791, 1017, 1363, 1560, 1621, 1644
BseMI	GCAATG	1 cut(s)	1470
BseMII	CTCAG	5 cut(s)	206, 411, 573, 860, 1014
BseNI	ACTGG	2 cut(s)	1056, 1859
BseRI	GAGGAG	4 cut(s)	575, 736, 739, 1799
BseSI	GKGCMC	1 cut(s)	996
BseXI	GCAGC	3 cut(s)	318, 330, 867
BseYI	CCCAGC	1 cut(s)	1768
Bsh1236I	CGCG	4 cut(s)	671, 702, 984, 1490
Bsh1285I	CGRYCG	1 cut(s)	118
BshNI	GGYRCC	3 cut(s)	13, 993, 1407
BsiEI	CGRYCG	1 cut(s)	118
BsiHKAI	GWGCWC	2 cut(s)	33, 1234
BsiHKCI	CYCGRG	3 cut(s)	26, 490, 1225
BslFI	GGGAC	4 cut(s)	88, 472, 1247, 1970
BslI	CCNNNNNNNGG	8 cut(s)	117, 373, 791, 1017, 1363, 1560, 1621, 1644
BsmAI	GTCTC	7 cut(s)	195, 557, 606, 630, 712, 1228, 1448
BsmBI	CGTCTC	2 cut(s)	712, 1448
BsmFI	GGGAC	4 cut(s)	88, 472, 1247, 1970
BsmI	GAATGC	1 cut(s)	1341
BsoBI	CYCGRG	3 cut(s)	26, 490, 1225
Bsp1286I	GDGCHC	3 cut(s)	33, 996, 1234
Bsp13I	TCCGGA	1 cut(s)	710
Bsp1407I	TGTACA	1 cut(s)	945
Bsp143I	GATC	8 cut(s)	369, 435, 462, 532, 646, 681, 1721, 1837
BspCNI	CTCAG	5 cut(s)	205, 410, 574, 859, 1015
BspEI	TCCGGA	1 cut(s)	710
BspFNI	CGCG	4 cut(s)	671, 702, 984, 1490
BspHI	TCATGA	1 cut(s)	1530
BspLI	GGNNCC	6 cut(s)	15, 593, 995, 1072, 1409, 1865
BspOI	GCTAGC	1 cut(s)	1203
BspPI	GGATC	2 cut(s)	443, 1729
BspQI	GCTCTTC	1 cut(s)	1431
BspT107I	GGYRCC	3 cut(s)	13, 993, 1407
BsrDI	GCAATG	1 cut(s)	1470
BsrFI	RCCGGY	2 cut(s)	958, 1661
BsrGI	TGTACA	1 cut(s)	945
BsrI	ACTGG	2 cut(s)	1056, 1859
BssAI	RCCGGY	2 cut(s)	958, 1661
BssECI	CCNNGG	6 cut(s)	324, 441, 700, 1425, 1620, 1650
BssMI	GATC	8 cut(s)	369, 435, 462, 532, 646, 681, 1721, 1837
BssNAI	GTATAC	1 cut(s)	1852
BssNI	GRCGYC	3 cut(s)	14, 705, 1983
BssSI	CACGAG	1 cut(s)	627
BssT1I	CCWWGG	4 cut(s)	324, 441, 1425, 1620
Bst1107I	GTATAC	1 cut(s)	1852
Bst2BI	CACGAG	1 cut(s)	627
Bst2UI	CCWGG	1 cut(s)	1065
Bst4CI	ACNGT	9 cut(s)	556, 600, 679, 943, 950, 1142, 1154, 1559, 1780
Bst6I	CTCTTC	3 cut(s)	1261, 1352, 1431
BstACI	GRCGYC	3 cut(s)	14, 705, 1983
BstAPI	GCANNNNNTGC	1 cut(s)	1196
BstAUI	TGTACA	1 cut(s)	945
BstC8I	GCNNGC	5 cut(s)	316, 956, 960, 1159, 1201
BstDEI	CTNAG	6 cut(s)	192, 397, 582, 846, 1023, 1576
BstDSI	CCRYGG	2 cut(s)	700, 1650
BstENI	CCTNNNNNAGG	1 cut(s)	1558
BstF5I	GGATG	4 cut(s)	501, 1353, 1611, 2043
BstFNI	CGCG	4 cut(s)	671, 702, 984, 1490
BstH2I	RGCGCY	1 cut(s)	17
BstHHI	GCGC	3 cut(s)	16, 314, 1490
BstKTI	GATC	8 cut(s)	372, 438, 465, 535, 649, 684, 1724, 1840
BstMAI	GTCTC	7 cut(s)	195, 557, 606, 630, 712, 1228, 1448
BstMBI	GATC	8 cut(s)	369, 435, 462, 532, 646, 681, 1721, 1837
BstMCI	CGRYCG	1 cut(s)	118
BstMWI	GCNNNNNNNGC	9 cut(s)	315, 318, 348, 702, 1196, 1550, 1631, 1715, 1796
BstNI	CCWGG	1 cut(s)	1065
BstSCI	CCNGG	2 cut(s)	791, 1063
BstSLI	GKGCMC	1 cut(s)	996
BstUI	CGCG	4 cut(s)	671, 702, 984, 1490
BstV1I	GCAGC	3 cut(s)	318, 330, 867
BstV2I	GAAGAC	1 cut(s)	680
BstX2I	RGATCY	1 cut(s)	1721
BstXI	CCANNNNNNTGG	1 cut(s)	1081
BstYI	RGATCY	1 cut(s)	1721
BstZ17I	GTATAC	1 cut(s)	1852
BsuI	GTATCC	1 cut(s)	1899
BtgI	CCRYGG	2 cut(s)	700, 1650
BtrI	CACGTC	1 cut(s)	157
BtsCI	GGATG	4 cut(s)	501, 1353, 1611, 2043
BtsIMutI	CAGTG	4 cut(s)	410, 955, 1159, 1994
Cac8I	GCNNGC	5 cut(s)	316, 956, 960, 1159, 1201
CciI	TCATGA	1 cut(s)	1530
CfoI	GCGC	3 cut(s)	16, 314, 1490
Cfr10I	RCCGGY	2 cut(s)	958, 1661
Cfr13I	GGNCC	6 cut(s)	247, 637, 694, 1036, 1647, 1716
Cfr42I	CCGCGG	1 cut(s)	703
CseI	GACGC	6 cut(s)	229, 428, 694, 1196, 1430, 2040
Csp6I	GTAC	4 cut(s)	875, 920, 946, 1370
CviQI	GTAC	4 cut(s)	875, 920, 946, 1370
DdeI	CTNAG	6 cut(s)	192, 397, 582, 846, 1023, 1576
DinI	GGCGCC	1 cut(s)	15
DpnI	GATC	8 cut(s)	371, 437, 464, 534, 648, 683, 1723, 1839
DpnII	GATC	8 cut(s)	369, 435, 462, 532, 646, 681, 1721, 1837
EaeI	YGGCCR	2 cut(s)	1659, 1788
Eam1104I	CTCTTC	3 cut(s)	1261, 1352, 1431
EarI	CTCTTC	3 cut(s)	1261, 1352, 1431
EciI	GGCGGA	1 cut(s)	239
Ecl136II	GAGCTC	1 cut(s)	31
Eco130I	CCWWGG	4 cut(s)	324, 441, 1425, 1620
Eco147I	AGGCCT	1 cut(s)	657
Eco24I	GRGCYC	1 cut(s)	33
Eco32I	GATATC	1 cut(s)	510
Eco47I	GGWCC	2 cut(s)	247, 1036
Eco53kI	GAGCTC	1 cut(s)	31
Eco57I	CTGAAG	4 cut(s)	262, 521, 1242, 2018
Eco88I	CYCGRG	3 cut(s)	26, 490, 1225
EcoICRI	GAGCTC	1 cut(s)	31
EcoNI	CCTNNNNNAGG	1 cut(s)	1558
EcoO109I	RGGNCCY	1 cut(s)	637
EcoRI	GAATTC	4 cut(s)	38, 894, 986, 1950
EcoRII	CCWGG	1 cut(s)	1063
EcoRV	GATATC	1 cut(s)	510
EcoT14I	CCWWGG	4 cut(s)	324, 441, 1425, 1620
EcoT38I	GRGCYC	1 cut(s)	33
EgeI	GGCGCC	1 cut(s)	15
EheI	GGCGCC	1 cut(s)	15
ErhI	CCWWGG	4 cut(s)	324, 441, 1425, 1620
Esp3I	CGTCTC	2 cut(s)	712, 1448
FalI	AAGNNNNNCTT	2 cut(s)	434, 466
FaqI	GGGAC	4 cut(s)	88, 472, 1247, 1970
FauI	CCCGC	1 cut(s)	65
FauNDI	CATATG	2 cut(s)	1894, 1929
FbaI	TGATCA	1 cut(s)	646
FblI	GTMKAC	2 cut(s)	197, 1851
Fnu4HI	GCNGC	9 cut(s)	12, 253, 307, 310, 319, 669, 703, 856, 1632
FokI	GGATG	4 cut(s)	508, 1340, 1598, 2050
FriOI	GRGCYC	1 cut(s)	33
Fsp4HI	GCNGC	9 cut(s)	12, 253, 307, 310, 319, 669, 703, 856, 1632
FspBI	CTAG	8 cut(s)	653, 899, 1200, 1220, 1236, 1250, 1796, 2055
GlaI	GCGC	3 cut(s)	15, 313, 1489
GluI	GCNGC	9 cut(s)	12, 253, 307, 310, 319, 669, 703, 856, 1632
GsaI	CCCAGC	1 cut(s)	1772
GsuI	CTGGAG	1 cut(s)	1047
HaeII	RGCGCY	1 cut(s)	17
HgaI	GACGC	6 cut(s)	229, 428, 694, 1196, 1430, 2040
HhaI	GCGC	3 cut(s)	16, 314, 1490
Hin1I	GRCGYC	3 cut(s)	14, 705, 1983
Hin6I	GCGC	3 cut(s)	14, 312, 1488
HinP1I	GCGC	3 cut(s)	14, 312, 1488
HincII	GTYRAC	3 cut(s)	198, 408, 1695
HindII	GTYRAC	3 cut(s)	198, 408, 1695
HinfI	GANTC	7 cut(s)	481, 565, 800, 964, 1383, 1418, 1843
Hpy166II	GTNNAC	6 cut(s)	198, 408, 946, 1470, 1695, 1852
Hpy188I	TCNGA	9 cut(s)	35, 281, 386, 546, 662, 849, 1147, 1448, 1842
Hpy188III	TCNNGA	7 cut(s)	26, 711, 755, 776, 1046, 1209, 1531
Hpy8I	GTNNAC	6 cut(s)	198, 408, 946, 1470, 1695, 1852
Hpy99I	CGWCG	2 cut(s)	133, 808
HpyAV	CCTTC	9 cut(s)	186, 229, 286, 356, 496, 820, 1486, 1636, 1679
HpyCH4III	ACNGT	9 cut(s)	556, 600, 679, 943, 950, 1142, 1154, 1559, 1780
HpyCH4IV	ACGT	7 cut(s)	128, 156, 263, 467, 519, 1519, 1983
HpyCH4V	TGCA	5 cut(s)	526, 835, 1463, 1909, 1994
HpyF10VI	GCNNNNNNNGC	9 cut(s)	315, 318, 348, 702, 1196, 1550, 1631, 1715, 1796
HpyF3I	CTNAG	6 cut(s)	192, 397, 582, 846, 1023, 1576
HpySE526I	ACGT	7 cut(s)	128, 156, 263, 467, 519, 1519, 1983
Hsp92I	GRCGYC	3 cut(s)	14, 705, 1983
HspAI	GCGC	3 cut(s)	14, 312, 1488
KasI	GGCGCC	1 cut(s)	13
Kpn2I	TCCGGA	1 cut(s)	710
KroI	GCCGGC	1 cut(s)	958
KroNI	GCCGGC	1 cut(s)	960
Ksp22I	TGATCA	1 cut(s)	646
KspI	CCGCGG	1 cut(s)	703
Kzo9I	GATC	8 cut(s)	369, 435, 462, 532, 646, 681, 1721, 1837
LguI	GCTCTTC	1 cut(s)	1431
LmnI	GCTCC	6 cut(s)	36, 386, 597, 1237, 1319, 2190
Lsp1109I	GCAGC	3 cut(s)	318, 330, 867
LweI	GCATC	4 cut(s)	69, 486, 537, 1362
MaeI	CTAG	8 cut(s)	653, 899, 1200, 1220, 1236, 1250, 1796, 2055
MaeII	ACGT	7 cut(s)	128, 156, 263, 467, 519, 1519, 1983
MalI	GATC	8 cut(s)	371, 437, 464, 534, 648, 683, 1723, 1839
MboI	GATC	8 cut(s)	369, 435, 462, 532, 646, 681, 1721, 1837
MboII	GAAGA	9 cut(s)	631, 685, 959, 1067, 1248, 1339, 1448, 1716, 1816
MfeI	CAATTG	1 cut(s)	2136
MflI	RGATCY	1 cut(s)	1721
MhlI	GDGCHC	3 cut(s)	33, 996, 1234
MlsI	TGGCCA	1 cut(s)	1790
MluCI	AATT	6 cut(s)	38, 894, 986, 1950, 2119, 2136
MluNI	TGGCCA	1 cut(s)	1790
Mly113I	GGCGCC	1 cut(s)	14
MlyI	GAGTC	3 cut(s)	559, 794, 1412
MmeI	TCCRAC	2 cut(s)	888, 1992
Mox20I	TGGCCA	1 cut(s)	1790
MreI	CGCCGGCG	1 cut(s)	958
MroI	TCCGGA	1 cut(s)	710
MroNI	GCCGGC	1 cut(s)	958
MscI	TGGCCA	1 cut(s)	1790
MseI	TTAA	1 cut(s)	470
MslI	CAYNNNNRTG	3 cut(s)	144, 821, 1529
Msp20I	TGGCCA	1 cut(s)	1790
MspA1I	CMGCKG	2 cut(s)	309, 702
MspR9I	CCNGG	2 cut(s)	793, 1065
MunI	CAATTG	1 cut(s)	2136
Mva1269I	GAATGC	1 cut(s)	1341
MvaI	CCWGG	1 cut(s)	1065
MvnI	CGCG	4 cut(s)	671, 702, 984, 1490
MwoI	GCNNNNNNNGC	9 cut(s)	315, 318, 348, 702, 1196, 1550, 1631, 1715, 1796
NaeI	GCCGGC	1 cut(s)	960
NarI	GGCGCC	1 cut(s)	14
NciI	CCSGG	1 cut(s)	793
NdeI	CATATG	2 cut(s)	1894, 1929
NdeII	GATC	8 cut(s)	369, 435, 462, 532, 646, 681, 1721, 1837
NgoMIV	GCCGGC	1 cut(s)	958
NheI	GCTAGC	1 cut(s)	1199
NlaIV	GGNNCC	6 cut(s)	15, 593, 995, 1072, 1409, 1865
NmeAIII	GCCGAG	2 cut(s)	103, 1685
NmuCI	GTSAC	8 cut(s)	927, 1238, 1375, 1753, 1942, 1979, 2062, 2131
PaeR7I	CTCGAG	2 cut(s)	26, 490
PagI	TCATGA	1 cut(s)	1530
PceI	AGGCCT	1 cut(s)	657
PciSI	GCTCTTC	1 cut(s)	1431
PctI	GAATGC	1 cut(s)	1341
PdiI	GCCGGC	1 cut(s)	960
PfeI	GAWTC	4 cut(s)	481, 964, 1383, 1843
PflMI	CCANNNNNTGG	2 cut(s)	373, 1644
PkrI	GCNGC	9 cut(s)	13, 254, 308, 311, 320, 670, 704, 857, 1633
PleI	GAGTC	3 cut(s)	559, 794, 1412
PluTI	GGCGCC	1 cut(s)	17
PpsI	GAGTC	3 cut(s)	559, 794, 1412
Psp124BI	GAGCTC	1 cut(s)	33
Psp1406I	AACGTT	1 cut(s)	1519
Psp6I	CCWGG	1 cut(s)	1063
PspFI	CCCAGC	1 cut(s)	1768
PspGI	CCWGG	1 cut(s)	1063
PspN4I	GGNNCC	6 cut(s)	15, 593, 995, 1072, 1409, 1865
PspPI	GGNCC	6 cut(s)	247, 637, 694, 1036, 1647, 1716
PspXI	VCTCGAGB	1 cut(s)	490
PsuI	RGATCY	1 cut(s)	1721
RsaI	GTAC	4 cut(s)	876, 921, 947, 1371
RsaNI	GTAC	4 cut(s)	875, 920, 946, 1370
RseI	CAYNNNNRTG	3 cut(s)	144, 821, 1529
SacI	GAGCTC	1 cut(s)	33
SacII	CCGCGG	1 cut(s)	703
SalI	GTCGAC	1 cut(s)	196
SapI	GCTCTTC	1 cut(s)	1431
SaqAI	TTAA	1 cut(s)	470
SatI	GCNGC	9 cut(s)	12, 253, 307, 310, 319, 669, 703, 856, 1632
Sau3AI	GATC	8 cut(s)	369, 435, 462, 532, 646, 681, 1721, 1837
Sau96I	GGNCC	6 cut(s)	247, 637, 694, 1036, 1647, 1716
SchI	GAGTC	3 cut(s)	559, 794, 1412
ScrFI	CCNGG	2 cut(s)	793, 1065
SduI	GDGCHC	3 cut(s)	33, 996, 1234
SfaNI	GCATC	4 cut(s)	69, 486, 537, 1362
SfoI	GGCGCC	1 cut(s)	15
Sfr274I	CTCGAG	2 cut(s)	26, 490
Sfr303I	CCGCGG	1 cut(s)	703
SgrAI	CRCCGGYG	1 cut(s)	958
SgrBI	CCGCGG	1 cut(s)	703
SinI	GGWCC	2 cut(s)	247, 1036
SlaI	CTCGAG	2 cut(s)	26, 490
SmiMI	CAYNNNNRTG	3 cut(s)	144, 821, 1529
SmlI	CTYRAG	2 cut(s)	26, 490
SmoI	CTYRAG	2 cut(s)	26, 490
Sse9I	AATT	6 cut(s)	38, 894, 986, 1950, 2119, 2136
SseBI	AGGCCT	1 cut(s)	657
SspDI	GGCGCC	1 cut(s)	13
SspMI	CTAG	8 cut(s)	653, 899, 1200, 1220, 1236, 1250, 1796, 2055
SstI	GAGCTC	1 cut(s)	33
StuI	AGGCCT	1 cut(s)	657
StyD4I	CCNGG	2 cut(s)	791, 1063
StyI	CCWWGG	4 cut(s)	324, 441, 1425, 1620
TaaI	ACNGT	9 cut(s)	556, 600, 679, 943, 950, 1142, 1154, 1559, 1780
TaiI	ACGT	7 cut(s)	131, 159, 266, 470, 522, 1522, 1986
TaqI	TCGA	8 cut(s)	27, 96, 162, 197, 491, 803, 1045, 1434
TasI	AATT	6 cut(s)	38, 894, 986, 1950, 2119, 2136
TatI	WGTACW	1 cut(s)	945
TauI	GCSGC	6 cut(s)	14, 255, 312, 671, 705, 1634
TfiI	GAWTC	4 cut(s)	481, 964, 1383, 1843
Tru1I	TTAA	1 cut(s)	470
Tru9I	TTAA	1 cut(s)	470
TscAI	CASTG	4 cut(s)	417, 955, 1159, 2001
TseFI	GTSAC	8 cut(s)	927, 1238, 1375, 1753, 1942, 1979, 2062, 2131
TseI	GCWGC	3 cut(s)	306, 318, 855
Tsp45I	GTSAC	8 cut(s)	927, 1238, 1375, 1753, 1942, 1979, 2062, 2131
TspDTI	ATGAA	6 cut(s)	805, 1519, 1816, 1911, 1946, 2054
TspGWI	ACGGA	2 cut(s)	862, 2117
TspRI	CASTG	4 cut(s)	417, 955, 1159, 2001
Van91I	CCANNNNNTGG	2 cut(s)	373, 1644
VpaK11BI	GGWCC	2 cut(s)	247, 1036
XagI	CCTNNNNNAGG	1 cut(s)	1558
XapI	RAATTY	4 cut(s)	38, 894, 986, 1950
XhoI	CTCGAG	2 cut(s)	26, 490
XmiI	GTMKAC	2 cut(s)	197, 1851
XspI	CTAG	8 cut(s)	653, 899, 1200, 1220, 1236, 1250, 1796, 2055
ZraI	GACGTC	1 cut(s)	1984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.