Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0012813

Physical Location & Seq

Genomic Coordinates Reverse (-)

20106042 .. 20108687

Gene Structure 2646 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1116300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGGAGCTCATAGATTTCAACCCGAGACCCCGGGGCCTAAAGCCTACCCTCGCCGAGCTCCTCCAGTGGGTCCGAGATGCGGAGAGTCCCAACAACTCTCCTCATGATCATGTTCTTCAGTTAGGGTACGGTTGCACCTCCGTGCCTTCCTCCTATCCCTTTGTCCTCTCATTCACTAATCTCACGTACAGCGTAAAAGTCCGGCGCAAAATGACCTTAGTACCCTCCTGTTTCAAAAGGAAACGAAAAACGGCAGAGATTAAACTGGGCATGGACAACAACAACACAAACACAAAAGTTTTGCTCAATCGAATATCCGGCGAGGCCAGAGAAGGCGAGATCATGGCGGTTCTCGGAGCAAGTGGGTCGGGAAAATCAACCCTCATCGATGCTCTAGCGAATAGAATCTCCAAGGAGAGCTTAAAAGGCTCGATCACTCTAAACGGGGAGGCCTTAGACTCAAGGCTCTTGAAAGTCATATCAGCTTATGTCATGCAAGATGATCTTTTGTTCCCAATGCTTACGGTTGAAGAAACTCTCATGTTCTCAGCCGAATTTCGGCTTCCTCGGAGTCTATCAAAGTCCAGGAAGAAAGCCAGAGTTCAAGCTCTGATCGACCAACTTGGTCTTCGAAATGCCGCCAAGACTGTGATCGGTGACGAGGGACATCGAGGCGTCTCAGGAGGCGAAAGAAGGCGGGTTTCGATTGGAATCGACATAATTCACGACCCCATTGTTCTGTTTCTTGATGAGCCGACCTCCGGGCTTGATTCGACGAGTGCTTATATGGTGGTGAAGGTTTTGCAGCTGATAGCGCAGAGTGGGAGCATTGTGGTCATGTCTATTCACCAACCTAGTTACAGAATATTGAGCTTGTTGGACCGGTTGATTTTCTTGTCACATGGACAGACTGTGTACAGTGATTCGCGGGCTAATCTTCCAGTGTTTTTCGGAGAGTTTGGGCATCCGATTCCTGAGACTGAGAATCGGACTGAGTTCGCTCTCGACCTCATTCGAGAGCTCGAGGAAACCCCAGGTGGAACTAAGAGCTTGGTGGAATTCAACAAATCATGGCAGATCACCAAGAACCAACAAAAACAACGAGCAAACCAAAACAACTTGATGATCAACTCCTGCTGCAAGCCAAAGCTTTCTCTCAAAGATGCAATTAGTGCAAGCATCTCAAGAGGCAAACTAGTCTCCGGAGCACCAAATGACTCAAACCTCTCCTCCTCAGTCCCCACATTTGCCAACCCTTCTTGGATTGAAATGGCAGTCATCTCCAAACGCTCCCTCACAAACTCCCGAAGAATGCCCGAACTCTTCGGCATTCGCCTAGGCGCGGTCCTCATCACGGGCATCATCCTAGCCACCATGTTTTGGCACCTAGACAGTTCCCCAAAAGGCATCAAAGAGCGCTTAGGGTTCTTCGCATTCACCATGTCCACCACATTCTACACTTGCGCTGAGGCCATCCCCAGCTTCCTCCAAGAACGATACATTTTCATGCGCGAAACCGCATACAATGCCTACCGCCGGTCCTCATACGTCCTAGCTCATTCTCTAATCTCCATTCCCTCCCTAGCCTTCCTCTCCTTAACCTTTGCCGCCACGACCTTCTGGGCCGTGGGGCTCGCTGGTGGGCTCCATGGCTTCCTCTTCTTCTTTTTCACTATTTTCGCAGCCTTCTGGGCCGGAAGCTCATTCGTCACATTCCTGTCAGGCATCGTGACACATGTCATGTTGGGGTACACAGTTGTGGTGGCAATTCTAGCCTACTTCCTACTCTTTAGTGGATTTTTCATAAGTAGAGATAAAATCCCACCCTATTGGCTTTGGTTTCACTACATGTCCCTAGTGAAGTACCCATATGAAGGTGCTTTGCAAAACGAGTTTGATGATCCAATCAAGTGCTTCGTGAGGGGCACCGAGATGTTCGACAACTCACCACTAGGAGCCTTCCCGGTGGCGATGAAGTTGAAGCTTCTCAAGAGCATGAGCACAACTTTGGGCGTGAACATCACGGCGTCCACCTGCGTGACCACCGGAGCAGATATACTGAAGCAGCAAGGGATCACGGACCTGAATAAATGGAGTTGCTTGTGGATCACCATTGCTTTGGGGTTCTTCTTTAGGATTCTCTTCTACCTTACCTTGTTGTTGGGCAGTAAAAATAAGAGGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006810 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0010345 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019438 GO:0019748 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044237 GO:0044249 GO:0044425 GO:0044464 GO:0044550 GO:0051179 GO:0051234 GO:0055085 GO:0071704 GO:0071944 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

729

Amino Acids

81.19

Weight (kDa)

9.5

Isoelectric Point (pI)

42.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	102 - 254	2.7e-27	ABC transporter
ABC2_membrane	PF01061	426 - 632	3.1e-44	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37360 AT3G53510
fragaria_vesca	FvH4_6g14770
malus_domestica	MD04G1116300.v1.1 MD12G1132000.v1.1
prunus_persica	Prupe.6G246200_v2.0.a1
pyrus_communis	pycom04g10630 pycom12g12800
rosa_chinensis	RchiOBHm_Chr3g0467991
rosa_laevigata	RLG00000024461
rosa_multiflora	Rmu_co8482947.1_g000001
rosa_roxburghii	Rroxscaffold_6G00413230
rosa_rugosa	Rorug03G0090900
rosa_samantha	Rh3AG139700 Rh3BG161200 Rh3CG161100 Rh3DG161600
rosa_wichuraiana	Rw3G013210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2042
Acc36I	ACCTGC	1 cut(s)	2042
AccB1I	GGYRCC	2 cut(s)	1383, 1925
AccB7I	CCANNNNNTGG	1 cut(s)	1380
AccII	CGCG	3 cut(s)	928, 1343, 1512
AccIII	TCCGGA	1 cut(s)	1202
AciI	CCGC	9 cut(s)	80, 347, 639, 697, 928, 1343, 1518, 1534, 1608
AclWI	GGATC	3 cut(s)	1895, 2081, 2114
AcsI	RAATTY	2 cut(s)	554, 1058
AcuI	CTGAAG	2 cut(s)	101, 2081
AcyI	GRCGYC	2 cut(s)	675, 2027
AfaI	GTAC	6 cut(s)	128, 188, 222, 917, 1751, 1865
AfeI	AGCGCT	1 cut(s)	1418
AfiI	CCNNNNNNNGG	9 cut(s)	67, 79, 558, 761, 1342, 1354, 1380, 1536, 1874
AflIII	ACRYGT	2 cut(s)	1735, 1848
AgeI	ACCGGT	1 cut(s)	882
AgsI	TTSAA	8 cut(s)	19, 235, 472, 530, 605, 1063, 1268, 1981
AhlI	ACTAGT	1 cut(s)	1195
AjnI	CCWGG	2 cut(s)	584, 1033
AjuI	GAANNNNNNNTTGG	2 cut(s)	612, 644
AleI	CACNNNNGTG	3 cut(s)	140, 1757, 2036
Alw21I	GWGCWC	5 cut(s)	9, 60, 1023, 1210, 2003
Alw26I	GTCTC	4 cut(s)	19, 682, 971, 1204
AlwI	GGATC	3 cut(s)	1895, 2081, 2114
Ama87I	CYCGRG	3 cut(s)	22, 30, 1022
Aor13HI	TCCGGA	1 cut(s)	1202
Aor51HI	AGCGCT	1 cut(s)	1418
AoxI	GGCC	6 cut(s)	34, 324, 450, 1470, 1623, 1692
ApeKI	GCWGC	4 cut(s)	805, 1137, 1682, 2065
ApoI	RAATTY	2 cut(s)	554, 1058
AsiGI	ACCGGT	1 cut(s)	882
AspA2I	CCTAGG	1 cut(s)	1336
AspLEI	GCGC	6 cut(s)	207, 817, 1343, 1419, 1466, 1512
AspS9I	GGNCC	8 cut(s)	34, 70, 880, 1345, 1539, 1623, 1692, 2080
AsuC2I	CCSGG	4 cut(s)	31, 32, 763, 1964
AsuHPI	GGTGA	7 cut(s)	668, 805, 839, 1072, 1429, 1938, 2101
AsuII	TTCGAA	1 cut(s)	631
AvaI	CYCGRG	3 cut(s)	22, 30, 1022
AvaII	GGWCC	5 cut(s)	70, 880, 1345, 1539, 2080
AvrII	CCTAGG	1 cut(s)	1336
BaeGI	GKGCMC	1 cut(s)	1928
BaeI	ACNNNNGTAYC	2 cut(s)	204, 237
BanI	GGYRCC	2 cut(s)	1383, 1925
BanII	GRGCYC	5 cut(s)	9, 60, 1023, 1635, 1647
BbsI	GAAGAC	1 cut(s)	620
Bbv12I	GWGCWC	5 cut(s)	9, 60, 1023, 1210, 2003
BbvCI	CCTCAGC	1 cut(s)	1467
BbvI	GCAGC	4 cut(s)	817, 1124, 1694, 2077
BccI	CCATC	1 cut(s)	1481
BceAI	ACGGC	3 cut(s)	267, 1610, 2040
BcgI	CGANNNNNNTGC	2 cut(s)	348, 382
BciT130I	CCWGG	2 cut(s)	586, 1035
BclI	TGATCA	2 cut(s)	106, 1125
BcnI	CCSGG	4 cut(s)	31, 32, 763, 1964
BcoDI	GTCTC	4 cut(s)	19, 682, 971, 1204
BcuI	ACTAGT	1 cut(s)	1195
BfoI	RGCGCY	1 cut(s)	1420
BfuAI	ACCTGC	1 cut(s)	2042
BglI	GCCNNNNNGGC	1 cut(s)	1691
BisI	GCNGC	6 cut(s)	639, 806, 1138, 1608, 1683, 2066
BlnI	CCTAGG	1 cut(s)	1336
BlsI	GCNGC	6 cut(s)	640, 807, 1139, 1609, 1684, 2067
Bme1390I	CCNGG	6 cut(s)	31, 32, 586, 763, 1035, 1964
Bme18I	GGWCC	5 cut(s)	70, 880, 1345, 1539, 2080
BmeT110I	CYCGRG	3 cut(s)	22, 30, 1022
BmgT120I	GGNCC	8 cut(s)	34, 70, 880, 1345, 1539, 1623, 1692, 2080
BmiI	GGNNCC	6 cut(s)	35, 71, 1385, 1646, 1927, 1957
BmrFI	CCNGG	6 cut(s)	31, 32, 586, 763, 1035, 1964
BmrI	ACTGGG	1 cut(s)	275
BmsI	GCATC	8 cut(s)	67, 379, 973, 1153, 1188, 1368, 1416, 1734
BmuI	ACTGGG	1 cut(s)	275
BoxI	GACNNNNGTC	1 cut(s)	1736
BpiI	GAAGAC	1 cut(s)	620
BplI	GAGNNNNNCTC	2 cut(s)	743, 775
BpmI	CTGGAG	1 cut(s)	47
Bpu10I	CCTNAGC	2 cut(s)	1420, 1467
Bpu14I	TTCGAA	1 cut(s)	631
BpuEI	CTTGAG	3 cut(s)	445, 1168, 1973
BpuMI	CCSGG	4 cut(s)	31, 32, 763, 1964
Bsa29I	ATCGAT	1 cut(s)	387
BsaAI	YACGTR	1 cut(s)	186
BsaBI	GATNNNNATC	1 cut(s)	710
BsaHI	GRCGYC	2 cut(s)	675, 2027
BsaI	GGTCTC	1 cut(s)	19
BsaJI	CCNNGG	9 cut(s)	29, 30, 31, 411, 566, 1033, 1336, 1626, 1648
BsaWI	WCCGGW	3 cut(s)	882, 1202, 2045
BsaXI	ACNNNNNCTCC	2 cut(s)	1214, 1244
Bsc4I	CCNNNNNNNGG	9 cut(s)	67, 79, 558, 761, 1342, 1354, 1380, 1536, 1874
Bse118I	RCCGGY	2 cut(s)	882, 1536
Bse1I	ACTGG	3 cut(s)	64, 270, 941
Bse3DI	GCAATG	1 cut(s)	2112
Bse8I	GATNNNNATC	1 cut(s)	710
BseAI	TCCGGA	1 cut(s)	1202
BseBI	CCWGG	2 cut(s)	586, 1035
BseCI	ATCGAT	1 cut(s)	387
BseDI	CCNNGG	9 cut(s)	29, 30, 31, 411, 566, 1033, 1336, 1626, 1648
BseGI	GGATG	3 cut(s)	964, 1362, 1473
BseJI	GATNNNNATC	1 cut(s)	710
BseLI	CCNNNNNNNGG	9 cut(s)	67, 79, 558, 761, 1342, 1354, 1380, 1536, 1874
BseMI	GCAATG	1 cut(s)	2112
BseMII	CTCAG	7 cut(s)	561, 693, 966, 972, 984, 1248, 1458
BseNI	ACTGG	3 cut(s)	64, 270, 941
BseRI	GAGGAG	4 cut(s)	50, 90, 1219, 1222
BseSI	GKGCMC	1 cut(s)	1928
BseXI	GCAGC	4 cut(s)	817, 1124, 1694, 2077
BseYI	CCCAGC	1 cut(s)	1478
Bsh1236I	CGCG	3 cut(s)	928, 1343, 1512
BshFI	GGCC	6 cut(s)	36, 326, 452, 1472, 1625, 1694
BshNI	GGYRCC	2 cut(s)	1383, 1925
BshTI	ACCGGT	1 cut(s)	882
BshVI	ATCGAT	1 cut(s)	387
BsiHKAI	GWGCWC	5 cut(s)	9, 60, 1023, 1210, 2003
BsiHKCI	CYCGRG	3 cut(s)	22, 30, 1022
BslFI	GGGAC	4 cut(s)	72, 678, 1223, 1837
BslI	CCNNNNNNNGG	9 cut(s)	67, 79, 558, 761, 1342, 1354, 1380, 1536, 1874
BsmAI	GTCTC	4 cut(s)	19, 682, 971, 1204
BsmBI	CGTCTC	1 cut(s)	682
BsmFI	GGGAC	4 cut(s)	72, 678, 1223, 1837
BsmI	GAATGC	3 cut(s)	1317, 1329, 1433
BsnI	GGCC	6 cut(s)	36, 326, 452, 1472, 1625, 1694
Bso31I	GGTCTC	1 cut(s)	19
BsoBI	CYCGRG	3 cut(s)	22, 30, 1022
Bsp119I	TTCGAA	1 cut(s)	631
Bsp1286I	GDGCHC	8 cut(s)	9, 60, 1023, 1210, 1635, 1647, 1928, 2003
Bsp13I	TCCGGA	1 cut(s)	1202
Bsp1407I	TGTACA	1 cut(s)	915
Bsp19I	CCATGG	1 cut(s)	1648
BspACI	CCGC	9 cut(s)	80, 347, 639, 697, 928, 1343, 1518, 1534, 1608
BspANI	GGCC	6 cut(s)	36, 326, 452, 1472, 1625, 1694
BspCNI	CTCAG	7 cut(s)	560, 692, 967, 973, 985, 1247, 1459
BspDI	ATCGAT	1 cut(s)	387
BspEI	TCCGGA	1 cut(s)	1202
BspFNI	CGCG	3 cut(s)	928, 1343, 1512
BspHI	TCATGA	1 cut(s)	103
BspLI	GGNNCC	6 cut(s)	35, 71, 1385, 1646, 1927, 1957
BspMI	ACCTGC	1 cut(s)	2042
BspPI	GGATC	3 cut(s)	1895, 2081, 2114
BspT104I	TTCGAA	1 cut(s)	631
BspT107I	GGYRCC	2 cut(s)	1383, 1925
BspTNI	GGTCTC	1 cut(s)	19
BsrDI	GCAATG	1 cut(s)	2112
BsrFI	RCCGGY	2 cut(s)	882, 1536
BsrGI	TGTACA	1 cut(s)	915
BsrI	ACTGG	3 cut(s)	64, 270, 941
BssAI	RCCGGY	2 cut(s)	882, 1536
BssECI	CCNNGG	9 cut(s)	29, 30, 31, 411, 566, 1033, 1336, 1626, 1648
BssNI	GRCGYC	2 cut(s)	675, 2027
BssT1I	CCWWGG	3 cut(s)	411, 1336, 1648
Bst2UI	CCWGG	2 cut(s)	586, 1035
Bst4CI	ACNGT	7 cut(s)	131, 526, 649, 913, 920, 1394, 1756
Bst6I	CTCTTC	3 cut(s)	1328, 1664, 2147
BstACI	GRCGYC	2 cut(s)	675, 2027
BstAPI	GCANNNNNTGC	2 cut(s)	1172, 1526
BstAUI	TGTACA	1 cut(s)	915
BstBAI	YACGTR	1 cut(s)	186
BstBI	TTCGAA	1 cut(s)	631
BstC8I	GCNNGC	4 cut(s)	930, 1142, 1177, 1635
BstDSI	CCRYGG	2 cut(s)	1626, 1648
BstF5I	GGATG	3 cut(s)	964, 1362, 1473
BstFNI	CGCG	3 cut(s)	928, 1343, 1512
BstH2I	RGCGCY	1 cut(s)	1420
BstHHI	GCGC	6 cut(s)	207, 817, 1343, 1419, 1466, 1512
BstMAI	GTCTC	4 cut(s)	19, 682, 971, 1204
BstMWI	GCNNNNNNNGC	6 cut(s)	426, 814, 1172, 1526, 1691, 1772
BstNI	CCWGG	2 cut(s)	586, 1035
BstNSI	RCATGY	2 cut(s)	1739, 1852
BstPAI	GACNNNNGTC	1 cut(s)	1736
BstSCI	CCNGG	6 cut(s)	29, 30, 584, 761, 1033, 1962
BstSLI	GKGCMC	1 cut(s)	1928
BstUI	CGCG	3 cut(s)	928, 1343, 1512
BstV1I	GCAGC	4 cut(s)	817, 1124, 1694, 2077
BstV2I	GAAGAC	1 cut(s)	620
BstXI	CCANNNNNNTGG	2 cut(s)	1830, 2119
Bsu15I	ATCGAT	1 cut(s)	387
BsuRI	GGCC	6 cut(s)	36, 326, 452, 1472, 1625, 1694
BsuTUI	ATCGAT	1 cut(s)	387
BtgI	CCRYGG	2 cut(s)	1626, 1648
BtgZI	GCGATG	1 cut(s)	1985
BtsCI	GGATG	3 cut(s)	964, 1362, 1473
BtsIMutI	CAGTG	3 cut(s)	71, 925, 948
BveI	ACCTGC	1 cut(s)	2042
Cac8I	GCNNGC	4 cut(s)	930, 1142, 1177, 1635
CciI	TCATGA	1 cut(s)	103
CfoI	GCGC	6 cut(s)	207, 817, 1343, 1419, 1466, 1512
Cfr10I	RCCGGY	2 cut(s)	882, 1536
Cfr13I	GGNCC	8 cut(s)	34, 70, 880, 1345, 1539, 1623, 1692, 2080
Cfr9I	CCCGGG	1 cut(s)	30
ClaI	ATCGAT	1 cut(s)	387
CseI	GACGC	2 cut(s)	664, 2016
Csp6I	GTAC	6 cut(s)	127, 187, 221, 916, 1750, 1864
CspAI	ACCGGT	1 cut(s)	882
CviQI	GTAC	6 cut(s)	127, 187, 221, 916, 1750, 1864
Eam1104I	CTCTTC	3 cut(s)	1328, 1664, 2147
EarI	CTCTTC	3 cut(s)	1328, 1664, 2147
Ecl136II	GAGCTC	3 cut(s)	7, 58, 1021
Eco130I	CCWWGG	3 cut(s)	411, 1336, 1648
Eco147I	AGGCCT	1 cut(s)	452
Eco24I	GRGCYC	5 cut(s)	9, 60, 1023, 1635, 1647
Eco31I	GGTCTC	1 cut(s)	19
Eco47I	GGWCC	5 cut(s)	70, 880, 1345, 1539, 2080
Eco47III	AGCGCT	1 cut(s)	1418
Eco53kI	GAGCTC	3 cut(s)	7, 58, 1021
Eco57I	CTGAAG	2 cut(s)	101, 2081
Eco88I	CYCGRG	3 cut(s)	22, 30, 1022
EcoICRI	GAGCTC	3 cut(s)	7, 58, 1021
EcoO109I	RGGNCCY	1 cut(s)	34
EcoRI	GAATTC	1 cut(s)	1058
EcoRII	CCWGG	2 cut(s)	584, 1033
EcoT14I	CCWWGG	3 cut(s)	411, 1336, 1648
EcoT38I	GRGCYC	5 cut(s)	9, 60, 1023, 1635, 1647
ErhI	CCWWGG	3 cut(s)	411, 1336, 1648
Esp3I	CGTCTC	1 cut(s)	682
FalI	AAGNNNNNCTT	4 cut(s)	404, 436, 489, 521
FaqI	GGGAC	4 cut(s)	72, 678, 1223, 1837
FauI	CCCGC	2 cut(s)	690, 921
FauNDI	CATATG	1 cut(s)	1870
FbaI	TGATCA	2 cut(s)	106, 1125
Fnu4HI	GCNGC	6 cut(s)	639, 806, 1138, 1608, 1683, 2066
FokI	GGATG	3 cut(s)	951, 1349, 1460
FriOI	GRGCYC	5 cut(s)	9, 60, 1023, 1635, 1647
Fsp4HI	GCNGC	6 cut(s)	639, 806, 1138, 1608, 1683, 2066
GlaI	GCGC	6 cut(s)	206, 816, 1342, 1418, 1465, 1511
GluI	GCNGC	6 cut(s)	639, 806, 1138, 1608, 1683, 2066
GsaI	CCCAGC	1 cut(s)	1482
GsuI	CTGGAG	1 cut(s)	47
HaeII	RGCGCY	1 cut(s)	1420
HaeIII	GGCC	6 cut(s)	36, 326, 452, 1472, 1625, 1694
HgaI	GACGC	2 cut(s)	664, 2016
HhaI	GCGC	6 cut(s)	207, 817, 1343, 1419, 1466, 1512
Hin1I	GRCGYC	2 cut(s)	675, 2027
Hin6I	GCGC	6 cut(s)	205, 815, 1341, 1417, 1464, 1510
HinP1I	GCGC	6 cut(s)	205, 815, 1341, 1417, 1464, 1510
HindIII	AAGCTT	2 cut(s)	1148, 1982
HphI	GGTGA	7 cut(s)	668, 805, 839, 1072, 1429, 1938, 2101
Hpy166II	GTNNAC	5 cut(s)	916, 1446, 1752, 2017, 2031
Hpy188I	TCNGA	7 cut(s)	74, 356, 570, 612, 953, 969, 990
Hpy8I	GTNNAC	5 cut(s)	916, 1446, 1752, 2017, 2031
Hpy99I	CGWCG	1 cut(s)	778
HpyCH4III	ACNGT	7 cut(s)	131, 526, 649, 913, 920, 1394, 1756
HpyCH4IV	ACGT	2 cut(s)	185, 1548
HpyCH4V	TGCA	7 cut(s)	135, 496, 805, 1140, 1166, 1175, 1885
HpyF10VI	GCNNNNNNNGC	6 cut(s)	426, 814, 1172, 1526, 1691, 1772
HpySE526I	ACGT	2 cut(s)	185, 1548
Hsp92I	GRCGYC	2 cut(s)	675, 2027
HspAI	GCGC	6 cut(s)	205, 815, 1341, 1417, 1464, 1510
Kpn2I	TCCGGA	1 cut(s)	1202
Ksp22I	TGATCA	2 cut(s)	106, 1125
LmnI	GCTCC	9 cut(s)	4, 63, 356, 825, 1205, 1295, 1650, 1955, 2048
Lsp1109I	GCAGC	4 cut(s)	817, 1124, 1694, 2077
LweI	GCATC	8 cut(s)	67, 379, 973, 1153, 1188, 1368, 1416, 1734
MaeII	ACGT	2 cut(s)	185, 1548
MaeIII	GTNAC	6 cut(s)	656, 857, 897, 1708, 1729, 2038
MhlI	GDGCHC	8 cut(s)	9, 60, 1023, 1210, 1635, 1647, 1928, 2003
MluCI	AATT	5 cut(s)	554, 720, 1058, 1167, 1767
MlyI	GAGTC	4 cut(s)	94, 452, 580, 1211
MmeI	TCCRAC	1 cut(s)	858
MroI	TCCGGA	1 cut(s)	1202
MseI	TTAA	3 cut(s)	261, 422, 1598
MslI	CAYNNNNRTG	6 cut(s)	108, 140, 1505, 1757, 1931, 2036
MspA1I	CMGCKG	1 cut(s)	808
MspR9I	CCNGG	6 cut(s)	31, 32, 586, 763, 1035, 1964
Mva1269I	GAATGC	3 cut(s)	1317, 1329, 1433
MvaI	CCWGG	2 cut(s)	586, 1035
MvnI	CGCG	3 cut(s)	928, 1343, 1512
MwoI	GCNNNNNNNGC	6 cut(s)	426, 814, 1172, 1526, 1691, 1772
NciI	CCSGG	4 cut(s)	31, 32, 763, 1964
NcoI	CCATGG	1 cut(s)	1648
NdeI	CATATG	1 cut(s)	1870
NlaIV	GGNNCC	6 cut(s)	35, 71, 1385, 1646, 1927, 1957
NmeAIII	GCCGAG	1 cut(s)	79
NmuCI	GTSAC	5 cut(s)	656, 897, 1708, 1729, 2038
NspI	RCATGY	2 cut(s)	1739, 1852
NspV	TTCGAA	1 cut(s)	631
OliI	CACNNNNGTG	3 cut(s)	140, 1757, 2036
PaeR7I	CTCGAG	1 cut(s)	1022
PagI	TCATGA	1 cut(s)	103
PaqCI	CACCTGC	1 cut(s)	2042
PceI	AGGCCT	1 cut(s)	452
PciI	ACATGT	2 cut(s)	1735, 1848
PctI	GAATGC	3 cut(s)	1317, 1329, 1433
PfeI	GAWTC	7 cut(s)	405, 711, 770, 923, 970, 985, 2137
PflMI	CCANNNNNTGG	1 cut(s)	1380
PfoI	TCCNGGA	1 cut(s)	584
PinAI	ACCGGT	1 cut(s)	882
PkrI	GCNGC	6 cut(s)	640, 807, 1139, 1609, 1684, 2067
PleI	GAGTC	4 cut(s)	93, 452, 579, 1211
PpsI	GAGTC	4 cut(s)	93, 452, 579, 1211
Ppu21I	YACGTR	1 cut(s)	186
PscI	ACATGT	2 cut(s)	1735, 1848
PshAI	GACNNNNGTC	1 cut(s)	1736
Psp124BI	GAGCTC	3 cut(s)	9, 60, 1023
Psp6I	CCWGG	2 cut(s)	584, 1033
PspFI	CCCAGC	1 cut(s)	1478
PspGI	CCWGG	2 cut(s)	584, 1033
PspN4I	GGNNCC	6 cut(s)	35, 71, 1385, 1646, 1927, 1957
PspPI	GGNCC	8 cut(s)	34, 70, 880, 1345, 1539, 1623, 1692, 2080
PspXI	VCTCGAGB	1 cut(s)	1022
PvuII	CAGCTG	1 cut(s)	808
RsaI	GTAC	6 cut(s)	128, 188, 222, 917, 1751, 1865
RsaNI	GTAC	6 cut(s)	127, 187, 221, 916, 1750, 1864
RseI	CAYNNNNRTG	6 cut(s)	108, 140, 1505, 1757, 1931, 2036
SacI	GAGCTC	3 cut(s)	9, 60, 1023
SaqAI	TTAA	3 cut(s)	261, 422, 1598
SatI	GCNGC	6 cut(s)	639, 806, 1138, 1608, 1683, 2066
Sau96I	GGNCC	8 cut(s)	34, 70, 880, 1345, 1539, 1623, 1692, 2080
SchI	GAGTC	4 cut(s)	94, 452, 580, 1211
ScrFI	CCNGG	6 cut(s)	31, 32, 586, 763, 1035, 1964
SduI	GDGCHC	8 cut(s)	9, 60, 1023, 1210, 1635, 1647, 1928, 2003
SfaNI	GCATC	8 cut(s)	67, 379, 973, 1153, 1188, 1368, 1416, 1734
Sfr274I	CTCGAG	1 cut(s)	1022
SfuI	TTCGAA	1 cut(s)	631
SinI	GGWCC	5 cut(s)	70, 880, 1345, 1539, 2080
SlaI	CTCGAG	1 cut(s)	1022
SmaI	CCCGGG	1 cut(s)	32
SmiMI	CAYNNNNRTG	6 cut(s)	108, 140, 1505, 1757, 1931, 2036
SmlI	CTYRAG	4 cut(s)	460, 1022, 1183, 1988
SmoI	CTYRAG	4 cut(s)	460, 1022, 1183, 1988
SpeI	ACTAGT	1 cut(s)	1195
Sse9I	AATT	5 cut(s)	554, 720, 1058, 1167, 1767
SseBI	AGGCCT	1 cut(s)	452
SsiI	CCGC	9 cut(s)	80, 347, 639, 697, 928, 1343, 1518, 1534, 1608
SspI	AATATT	1 cut(s)	867
SstI	GAGCTC	3 cut(s)	9, 60, 1023
StuI	AGGCCT	1 cut(s)	452
StyD4I	CCNGG	6 cut(s)	29, 30, 584, 761, 1033, 1962
StyI	CCWWGG	3 cut(s)	411, 1336, 1648
TaaI	ACNGT	7 cut(s)	131, 526, 649, 913, 920, 1394, 1756
TaiI	ACGT	2 cut(s)	188, 1551
TasI	AATT	5 cut(s)	554, 720, 1058, 1167, 1767
TatI	WGTACW	1 cut(s)	915
TauI	GCSGC	2 cut(s)	641, 1610
TfiI	GAWTC	7 cut(s)	405, 711, 770, 923, 970, 985, 2137
Tru1I	TTAA	3 cut(s)	261, 422, 1598
Tru9I	TTAA	3 cut(s)	261, 422, 1598
TscAI	CASTG	3 cut(s)	71, 925, 948
TseFI	GTSAC	5 cut(s)	656, 897, 1708, 1729, 2038
TseI	GCWGC	4 cut(s)	805, 1137, 1682, 2065
Tsp45I	GTSAC	5 cut(s)	656, 897, 1708, 1729, 2038
TspDTI	ATGAA	4 cut(s)	1495, 1792, 1887, 1988
TspGWI	ACGGA	2 cut(s)	130, 2093
TspMI	CCCGGG	1 cut(s)	30
TspRI	CASTG	3 cut(s)	71, 925, 948
Van91I	CCANNNNNTGG	1 cut(s)	1380
VpaK11BI	GGWCC	5 cut(s)	70, 880, 1345, 1539, 2080
XapI	RAATTY	2 cut(s)	554, 1058
XceI	RCATGY	2 cut(s)	1739, 1852
XhoI	CTCGAG	1 cut(s)	1022
XmaI	CCCGGG	1 cut(s)	30
XmaJI	CCTAGG	1 cut(s)	1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.