AT3G60400
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
22329048 .. 22331338
2291 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G60400.1

Sequence Viewer

Length: 1677 bp
ATGTTCATGGTTCGATTGAAATTCGCATCGATCTCTCATAATTTCAGTACGGTGGCGGCGAAACATAGAAGAGTGCCGTCGAAATACAAGTCTCTAGCCATCGGAAAAGCCCAGCAAGCCATTACAGACTATCTCCACACCACCAGGTCTCTCTCCTACACTCACGCTGAACAAATTGCCTCAAACGCCTCCGTTTCGATTCGAAACCTCATCCTGAAACTCGATTTCTCTGTTCCTACCTTCTCCAAATCTCTTCGGAAGCATCTCAGTTACCATCCTATTAACGAATTCGAGTTTTTCTTCGAGAGCATTGGCATTGACTACAGTGAGGTTAGCGAGTTTTTGCCTGAGAAGAAATTCTTCTTCTCTGAGGATCGGACTGTGTTGGATGCAGCTTTTGCTTTATCTGGATTTGGGTTTCCTTGGAATAAGCTTGGTAAGTTGTATAAAGAGGAAAGGTTGGTTTTTGTGCAGCGTCCTGGAGAAATTGAATCCAGGCTACTTAAGTTTAAAGATATAGGATTCAGTACAGTTGCGGTGATTGGTACTTGTTTAGCGATTCCTCGTACTCTCTGTGGAGGTGGTGAATTGGGTTCGGAGATACGTTGTTTGTTTGTTAAGCTGAAAAGACTTTTTGATGAGTTTGATTCACATCATCTTTTTGAAGAAAATGTGGATTCTTGGCTCGCCGTTAGCAGGAAGATTAGGATCTTTTACGATTTGGGTTGTGAGAATGAAGAGATGTGGGAGTTGATGTGTAGAAATAAGTCACTTTTTCTGGAATATTCTGAAGAAGCTCTGATGAATAAGGCTGGATATTTTTGTAGGTTTGGTGTTAGCAAAGAAGATGCTGCTCTTTTGATTCTTCGAAATCCCGCTATTATGAATTTTGATCTAGAGAAACCGGTGATCTCTGTTACAGGAATGCTAAAGCATTTTGGATTGAGACAGGATGAAGTGGATGCTGTTGCTCAGAAGTACCCGTATGTTTTTGGTAGAAACCAATTGAAGAATCTGCCTTATGTGCTTAGAGCAATAGATTTGCATGAAAGGATCTTTGATATATTGAAGAATGGGAACCATCATTTACTCGCTAGCTATACCTTGATGGATCCCGATGAAGACTTAGAGAGAGAGTATCAAGAAGGCTTGGAGGAGCTTCAAAACTCAAGAACCAAAAGACACAACATTCAAAAGTTGGATTTCCTTCATGAAATAGGGTTTGGCGAAAACGGCATCACCATGAAGGTACTACAACATGTACATGGTACGGCGGTAGAACTCCACGACCGATTCCAAATCTTACTAAACAGTGGCATCATTTTCTCAAAGATATGCATGTTGATAAGATCAGCACCAAAGATCTTGAATCAGAAACCACATAGCATACAAGATAAACTAAGGTTCCTCTGTGGCGAGATGGGAGATTCTTTGGATTACCTAGAGGTTTTCCCAGCTTATCTTTGTTTTGACCTGGAGAACAGAATCAGTCCAAGGTTTAGATTCCATAAGTGGCTTGTGGAGAAAGGGTTTAGCGAGAAAAGCTATTCAATCGCAAGCATTGTAGCTACAAGCGAAAAGGCCTTCATAGCTCGTCTATATGGGATTCATCCTGCAATCCCGAAACATTGGTTCGAACGCTTCTCCAGCAGAAAAACCAGAGACACTGTATCCTAA

Protein Analysis

558

Amino Acids

64.56

Weight (kDa)

8.39

Isoelectric Point (pI)

37.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 232 - 334 8.9e-10 mTERF
mTERF PF02536 393 - 529 8.7e-15 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013458)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 56, 536, 876, 1274
AclWI GGATC 5 cut(s) 381, 716, 1061, 1106, 1119
AcsI RAATTY 4 cut(s) 20, 287, 356, 886
AcuI CTGAAG 1 cut(s) 810
AfaI GTAC 8 cut(s) 49, 529, 547, 568, 980, 1251, 1263, 1270
AfiI CCNNNNNNNGG 1 cut(s) 696
AflII CTTAAG 1 cut(s) 503
AflIII ACRYGT 1 cut(s) 1258
AgeI ACCGGT 1 cut(s) 904
AgsI TTSAA 9 cut(s) 19, 491, 665, 1009, 1069, 1163, 1193, 1369, 1551
AjnI CCWGG 4 cut(s) 143, 478, 494, 1473
AjuI GAANNNNNNNTTGG 2 cut(s) 1206, 1238
Alw26I GTCTC 4 cut(s) 96, 153, 940, 1656
AlwI GGATC 5 cut(s) 381, 716, 1061, 1106, 1119
AoxI GGCC 1 cut(s) 1581
ApeKI GCWGC 3 cut(s) 392, 472, 851
ApoI RAATTY 4 cut(s) 20, 287, 356, 886
ArsI GACNNNNNNTTYG 2 cut(s) 74, 106
AsiGI ACCGGT 1 cut(s) 904
Asp700I GAANNNNTTC 2 cut(s) 356, 359
AsuHPI GGTGA 4 cut(s) 550, 596, 919, 1231
AsuII TTCGAA 3 cut(s) 202, 868, 1635
AsuNHI GCTAGC 1 cut(s) 1094
BaeI ACNNNNGTAYC 2 cut(s) 1260, 1293
BamHI GGATCC 1 cut(s) 1111
BbsI GAAGAC 1 cut(s) 1128
BbvI GCAGC 3 cut(s) 404, 484, 838
BccI CCATC 5 cut(s) 107, 282, 1089, 1102, 1414
BceAI ACGGC 4 cut(s) 61, 674, 1249, 1287
BciT130I CCWGG 4 cut(s) 145, 480, 496, 1475
BcoDI GTCTC 4 cut(s) 96, 153, 940, 1656
BfaI CTAG 4 cut(s) 95, 896, 1095, 1442
BfmI CTRYAG 1 cut(s) 322
BfrI CTTAAG 1 cut(s) 503
BglII AGATCT 1 cut(s) 1362
BisI GCNGC 4 cut(s) 57, 393, 473, 852
BlsI GCNGC 4 cut(s) 58, 394, 474, 853
Bme1390I CCNGG 4 cut(s) 145, 480, 496, 1475
BmiI GGNNCC 3 cut(s) 1079, 1113, 1406
BmrFI CCNGG 4 cut(s) 145, 480, 496, 1475
BmsI GCATC 7 cut(s) 35, 271, 379, 838, 952, 1245, 1326
BmtI GCTAGC 1 cut(s) 1098
BpiI GAAGAC 1 cut(s) 1128
BpmI CTGGAG 3 cut(s) 501, 1496, 1630
Bpu14I TTCGAA 3 cut(s) 202, 868, 1635
BpuEI CTTGAG 1 cut(s) 1153
Bsa29I ATCGAT 1 cut(s) 29
BsaBI GATNNNNATC 2 cut(s) 651, 707
BsaI GGTCTC 1 cut(s) 153
BsaJI CCNNGG 2 cut(s) 422, 1493
BsaWI WCCGGW 1 cut(s) 904
BsaXI ACNNNNNCTCC 4 cut(s) 740, 770, 1514, 1544
Bsc4I CCNNNNNNNGG 1 cut(s) 696
Bse118I RCCGGY 1 cut(s) 904
Bse8I GATNNNNATC 2 cut(s) 651, 707
BseBI CCWGG 4 cut(s) 145, 480, 496, 1475
BseCI ATCGAT 1 cut(s) 29
BseDI CCNNGG 2 cut(s) 422, 1493
BseGI GGATG 6 cut(s) 210, 274, 394, 958, 967, 1609
BseJI GATNNNNATC 2 cut(s) 651, 707
BseLI CCNNNNNNNGG 1 cut(s) 696
BseMII CTCAG 4 cut(s) 280, 339, 360, 986
BseRI GAGGAG 1 cut(s) 1169
BseXI GCAGC 3 cut(s) 404, 484, 838
BseYI CCCAGC 2 cut(s) 111, 1453
BsgI GTGCAG 1 cut(s) 491
Bsh1285I CGRYCG 1 cut(s) 1291
BshFI GGCC 1 cut(s) 1583
BshTI ACCGGT 1 cut(s) 904
BshVI ATCGAT 1 cut(s) 29
BsiEI CGRYCG 1 cut(s) 1291
BsiSI CCGG 1 cut(s) 905
BslI CCNNNNNNNGG 1 cut(s) 696
BsmAI GTCTC 4 cut(s) 96, 153, 940, 1656
BsmI GAATGC 1 cut(s) 930
BsnI GGCC 1 cut(s) 1583
Bso31I GGTCTC 1 cut(s) 153
Bsp119I TTCGAA 3 cut(s) 202, 868, 1635
Bsp1407I TGTACA 1 cut(s) 1261
Bsp143I GATC 9 cut(s) 30, 373, 708, 892, 909, 1053, 1111, 1349, 1362
BspACI CCGC 4 cut(s) 56, 536, 876, 1274
BspANI GGCC 1 cut(s) 1583
BspCNI CTCAG 4 cut(s) 279, 340, 361, 985
BspDI ATCGAT 1 cut(s) 29
BspHI TCATGA 1 cut(s) 1210
BspLI GGNNCC 3 cut(s) 1079, 1113, 1406
BspOI GCTAGC 1 cut(s) 1098
BspPI GGATC 5 cut(s) 381, 716, 1061, 1106, 1119
BspT104I TTCGAA 3 cut(s) 202, 868, 1635
BspTI CTTAAG 1 cut(s) 503
BspTNI GGTCTC 1 cut(s) 153
BsrFI RCCGGY 1 cut(s) 904
BsrGI TGTACA 1 cut(s) 1261
BssAI RCCGGY 1 cut(s) 904
BssECI CCNNGG 2 cut(s) 422, 1493
BssMI GATC 9 cut(s) 30, 373, 708, 892, 909, 1053, 1111, 1349, 1362
BssT1I CCWWGG 2 cut(s) 422, 1493
Bst2UI CCWGG 4 cut(s) 145, 480, 496, 1475
Bst4CI ACNGT 6 cut(s) 52, 326, 382, 532, 1313, 1669
Bst6I CTCTTC 3 cut(s) 64, 258, 732
BstAFI CTTAAG 1 cut(s) 503
BstAPI GCANNNNNTGC 1 cut(s) 398
BstAUI TGTACA 1 cut(s) 1261
BstBI TTCGAA 3 cut(s) 202, 868, 1635
BstC8I GCNNGC 4 cut(s) 117, 687, 1096, 1558
BstDEI CTNAG 7 cut(s) 266, 348, 369, 972, 1028, 1126, 1400
BstF5I GGATG 6 cut(s) 210, 274, 394, 958, 967, 1609
BstKTI GATC 9 cut(s) 33, 376, 711, 895, 912, 1056, 1114, 1352, 1365
BstMAI GTCTC 4 cut(s) 96, 153, 940, 1656
BstMBI GATC 9 cut(s) 30, 373, 708, 892, 909, 1053, 1111, 1349, 1362
BstMCI CGRYCG 1 cut(s) 1291
BstMWI GCNNNNNNNGC 8 cut(s) 116, 185, 398, 1024, 1233, 1542, 1589, 1647
BstNI CCWGG 4 cut(s) 145, 480, 496, 1475
BstNSI RCATGY 2 cut(s) 1262, 1342
BstSCI CCNGG 4 cut(s) 143, 478, 494, 1473
BstSFI CTRYAG 1 cut(s) 322
BstV1I GCAGC 3 cut(s) 404, 484, 838
BstV2I GAAGAC 1 cut(s) 1128
BstX2I RGATCY 4 cut(s) 708, 1053, 1111, 1362
BstYI RGATCY 4 cut(s) 708, 1053, 1111, 1362
Bsu15I ATCGAT 1 cut(s) 29
BsuRI GGCC 1 cut(s) 1583
BsuTUI ATCGAT 1 cut(s) 29
BtsCI GGATG 6 cut(s) 210, 274, 394, 958, 967, 1609
BtsIMutI CAGTG 3 cut(s) 331, 1318, 1665
Cac8I GCNNGC 4 cut(s) 117, 687, 1096, 1558
CciI TCATGA 1 cut(s) 1210
Cfr10I RCCGGY 1 cut(s) 904
ClaI ATCGAT 1 cut(s) 29
CseI GACGC 1 cut(s) 464
CsiI ACCWGGT 1 cut(s) 143
Csp6I GTAC 8 cut(s) 48, 528, 546, 567, 979, 1250, 1262, 1269
CspAI ACCGGT 1 cut(s) 904
CviAII CATG 7 cut(s) 7, 1046, 1211, 1243, 1259, 1265, 1339
CviQI GTAC 8 cut(s) 48, 528, 546, 567, 979, 1250, 1262, 1269
DdeI CTNAG 7 cut(s) 266, 348, 369, 972, 1028, 1126, 1400
DpnI GATC 9 cut(s) 32, 375, 710, 894, 911, 1055, 1113, 1351, 1364
DpnII GATC 9 cut(s) 30, 373, 708, 892, 909, 1053, 1111, 1349, 1362
DraI TTTAAA 1 cut(s) 511
Eam1104I CTCTTC 3 cut(s) 64, 258, 732
EarI CTCTTC 3 cut(s) 64, 258, 732
Eco130I CCWWGG 2 cut(s) 422, 1493
Eco147I AGGCCT 1 cut(s) 1583
Eco31I GGTCTC 1 cut(s) 153
Eco57I CTGAAG 1 cut(s) 810
EcoRI GAATTC 1 cut(s) 287
EcoRII CCWGG 4 cut(s) 143, 478, 494, 1473
EcoT14I CCWWGG 2 cut(s) 422, 1493
EcoT22I ATGCAT 1 cut(s) 1340
ErhI CCWWGG 2 cut(s) 422, 1493
FaeI CATG 7 cut(s) 10, 1049, 1214, 1246, 1262, 1268, 1342
FalI AAGNNNNNCTT 2 cut(s) 344, 376
FatI CATG 7 cut(s) 6, 1045, 1210, 1242, 1258, 1264, 1338
FauI CCCGC 1 cut(s) 883
Fnu4HI GCNGC 4 cut(s) 57, 393, 473, 852
FokI GGATG 6 cut(s) 197, 261, 401, 965, 974, 1596
Fsp4HI GCNGC 4 cut(s) 57, 393, 473, 852
FspBI CTAG 4 cut(s) 95, 896, 1095, 1442
GluI GCNGC 4 cut(s) 57, 393, 473, 852
GsaI CCCAGC 2 cut(s) 115, 1457
GsuI CTGGAG 3 cut(s) 501, 1496, 1630
HaeIII GGCC 1 cut(s) 1583
HapII CCGG 1 cut(s) 905
HgaI GACGC 1 cut(s) 464
Hin1II CATG 7 cut(s) 10, 1049, 1214, 1246, 1262, 1268, 1342
HindIII AAGCTT 1 cut(s) 431
HpaII CCGG 1 cut(s) 905
HphI GGTGA 4 cut(s) 550, 596, 919, 1231
Hpy188I TCNGA 9 cut(s) 104, 258, 370, 378, 598, 790, 801, 975, 1374
Hpy99I CGWCG 1 cut(s) 82
HpyAV CCTTC 5 cut(s) 250, 1139, 1217, 1240, 1594
HpyCH4III ACNGT 6 cut(s) 52, 326, 382, 532, 1313, 1669
HpyCH4IV ACGT 1 cut(s) 604
HpyCH4V TGCA 5 cut(s) 392, 472, 1045, 1338, 1616
HpyF10VI GCNNNNNNNGC 8 cut(s) 116, 185, 398, 1024, 1233, 1542, 1589, 1647
HpyF3I CTNAG 7 cut(s) 266, 348, 369, 972, 1028, 1126, 1400
HpySE526I ACGT 1 cut(s) 604
Hsp92II CATG 7 cut(s) 10, 1049, 1214, 1246, 1262, 1268, 1342
Kzo9I GATC 9 cut(s) 30, 373, 708, 892, 909, 1053, 1111, 1349, 1362
LmnI GCTCC 1 cut(s) 1156
Lsp1109I GCAGC 3 cut(s) 404, 484, 838
LweI GCATC 7 cut(s) 35, 271, 379, 838, 952, 1245, 1326
MabI ACCWGGT 1 cut(s) 143
MaeI CTAG 4 cut(s) 95, 896, 1095, 1442
MaeII ACGT 1 cut(s) 604
MaeIII GTNAC 3 cut(s) 269, 768, 916
MalI GATC 9 cut(s) 32, 375, 710, 894, 911, 1055, 1113, 1351, 1364
MboI GATC 9 cut(s) 30, 373, 708, 892, 909, 1053, 1111, 1349, 1362
MfeI CAATTG 1 cut(s) 1004
MflI RGATCY 4 cut(s) 708, 1053, 1111, 1362
MluCI AATT 9 cut(s) 20, 40, 174, 287, 356, 486, 587, 886, 1004
MmeI TCCRAC 2 cut(s) 366, 1179
Mph1103I ATGCAT 1 cut(s) 1340
MroXI GAANNNNTTC 2 cut(s) 356, 359
MseI TTAA 4 cut(s) 282, 504, 510, 618
MslI CAYNNNNRTG 2 cut(s) 1241, 1263
MspCI CTTAAG 1 cut(s) 503
MspI CCGG 1 cut(s) 905
MspR9I CCNGG 4 cut(s) 145, 480, 496, 1475
MunI CAATTG 1 cut(s) 1004
Mva1269I GAATGC 1 cut(s) 930
MvaI CCWGG 4 cut(s) 145, 480, 496, 1475
MwoI GCNNNNNNNGC 8 cut(s) 116, 185, 398, 1024, 1233, 1542, 1589, 1647
NdeII GATC 9 cut(s) 30, 373, 708, 892, 909, 1053, 1111, 1349, 1362
NheI GCTAGC 1 cut(s) 1094
NlaIII CATG 7 cut(s) 10, 1049, 1214, 1246, 1262, 1268, 1342
NlaIV GGNNCC 3 cut(s) 1079, 1113, 1406
NmuCI GTSAC 1 cut(s) 768
NsiI ATGCAT 1 cut(s) 1340
NspI RCATGY 2 cut(s) 1262, 1342
NspV TTCGAA 3 cut(s) 202, 868, 1635
PagI TCATGA 1 cut(s) 1210
PceI AGGCCT 1 cut(s) 1583
PciI ACATGT 1 cut(s) 1258
PcsI WCGNNNNNNNCGW 1 cut(s) 56
PctI GAATGC 1 cut(s) 930
PdmI GAANNNNTTC 2 cut(s) 356, 359
PfoI TCCNGGA 1 cut(s) 478
PinAI ACCGGT 1 cut(s) 904
PkrI GCNGC 4 cut(s) 58, 394, 474, 853
PscI ACATGT 1 cut(s) 1258
Psp6I CCWGG 4 cut(s) 143, 478, 494, 1473
PspFI CCCAGC 2 cut(s) 111, 1453
PspGI CCWGG 4 cut(s) 143, 478, 494, 1473
PspN4I GGNNCC 3 cut(s) 1079, 1113, 1406
PsuI RGATCY 4 cut(s) 708, 1053, 1111, 1362
RsaI GTAC 8 cut(s) 49, 529, 547, 568, 980, 1251, 1263, 1270
RsaNI GTAC 8 cut(s) 48, 528, 546, 567, 979, 1250, 1262, 1269
RseI CAYNNNNRTG 2 cut(s) 1241, 1263
SaqAI TTAA 4 cut(s) 282, 504, 510, 618
SatI GCNGC 4 cut(s) 57, 393, 473, 852
Sau3AI GATC 9 cut(s) 30, 373, 708, 892, 909, 1053, 1111, 1349, 1362
ScrFI CCNGG 4 cut(s) 145, 480, 496, 1475
SexAI ACCWGGT 1 cut(s) 143
SfaNI GCATC 7 cut(s) 35, 271, 379, 838, 952, 1245, 1326
SfcI CTRYAG 1 cut(s) 322
SfuI TTCGAA 3 cut(s) 202, 868, 1635
SmiMI CAYNNNNRTG 2 cut(s) 1241, 1263
SmlI CTYRAG 2 cut(s) 503, 1168
SmoI CTYRAG 2 cut(s) 503, 1168
Sse9I AATT 9 cut(s) 20, 40, 174, 287, 356, 486, 587, 886, 1004
SseBI AGGCCT 1 cut(s) 1583
SsiI CCGC 4 cut(s) 56, 536, 876, 1274
SspI AATATT 1 cut(s) 785
SspMI CTAG 4 cut(s) 95, 896, 1095, 1442
StuI AGGCCT 1 cut(s) 1583
StyD4I CCNGG 4 cut(s) 143, 478, 494, 1473
StyI CCWWGG 2 cut(s) 422, 1493
TaaI ACNGT 6 cut(s) 52, 326, 382, 532, 1313, 1669
TaiI ACGT 1 cut(s) 607
TaqII GACCGA 1 cut(s) 1305
TasI AATT 9 cut(s) 20, 40, 174, 287, 356, 486, 587, 886, 1004
TatI WGTACW 2 cut(s) 527, 1261
TauI GCSGC 1 cut(s) 59
Tru1I TTAA 4 cut(s) 282, 504, 510, 618
Tru9I TTAA 4 cut(s) 282, 504, 510, 618
TscAI CASTG 3 cut(s) 331, 1318, 1672
TseFI GTSAC 1 cut(s) 768
TseI GCWGC 3 cut(s) 392, 472, 851
Tsp45I GTSAC 1 cut(s) 768
TspGWI ACGGA 1 cut(s) 181
TspRI CASTG 3 cut(s) 331, 1318, 1672
Vha464I CTTAAG 1 cut(s) 503
XapI RAATTY 4 cut(s) 20, 287, 356, 886
XbaI TCTAGA 1 cut(s) 895
XceI RCATGY 2 cut(s) 1262, 1342
XmnI GAANNNNTTC 2 cut(s) 356, 359
XspI CTAG 4 cut(s) 95, 896, 1095, 1442
Zsp2I ATGCAT 1 cut(s) 1340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.