Rh1BG167400
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
26850749 .. 26853901
3153 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG167400.1

Sequence Viewer

Length: 1671 bp
ATGTCCCTCCCCAAATCCCTCTTCACGCTCCTCTCTCACCACTTCTCCACTGCCGCCAAAACCACCACAAACCTCCCAAAAGTCCCCAATGTCCCCACCAAGTACAAGTCCGAAGCCATCAACCAAGCCCAGAAAGTCCTCACTGACTACCTCCACACCACCAGGTCCCTACCCTACACTTACGCCGAGCACATCAGCAAGAACGCCCTCTTCTCCCTCTCCAATCTCGTCAAGAAGGTCCCCTACTCCGTCCCCAACTTCCCCAGAAGCTTCCAGAGGTTCCTCAGGTACCACCCCATCAATGAATTTGAGTTTTTCTTTGAAAGCATTGGCATAGACTACCCCCAAGTCTGTGAGTTTTTACCAACCAATAAGTTTTTCTTTTCGGAAGACGAGACTGTTTTGGATGCTGCTTGTGTGCTTAGTGGTTTCGGGTTTCCATGGAACATGTTGGGGAAGTTGTATAGGGAGGAGCATTGTATTTTTAGAGAGAGTTCAGAGGAGTTGAAAGCTAGGCTTTGTAGGTTTAAGGAGTATGGGTGGACTAATCTTTCGGTTGTGGGGATGTGCTTGGCTTTCCCTCGGTTGTTGCGCGTCGACCGGGAATTGGGTGGTGAGGTTGTGGCATTGTTGGATGATTTGAAGAGGGTTTTTGTGGAGTTTGATATTGGAAATTGTGTCGAGGGAAATGTGGATACTTGGTATGAGGTTTGTAGGATGGTGAGGGTGTTTTATGATTTGGGTATCGAAAAAGGGAAGGTTGGGGAGTTGTTGGGTAGGAAGAAAGATATTTTTCTTCAACACCCGGAAGAGGTGTTGGTTCGGAAAGCTAACTACTTCTGTAGATTAGGTGTTAGGAAGGAGGATGTAGGTTTATTGCTTCTTCAAAGACCGGAAGTTTTGAATCTTGAACTGGAAAAAACGGTGATATCAACTTTGGGATTGTTGAAACATTTAGGATTGAATGAGAATGAATTGAAGGAAGTGAGTCAAAGATATCCTTTTGCGATGGGAAGAAATAGAATGGTCAATGTACCTCATTTGATGAGGGCTTTGGATCTTCATGAGTGGTTCTTCACTAGGATTAAGAATGAACATCAATTGCTAGCTAATTATGTACTCAGTGATTCTGATGAAGAACACATGAAGAAAGAATTTAGTAATGGATTGGAGCAGTTCCAATCTTGTAAAACTCCTGTTCATGCAATGAAGAAATTGAATTTCATGCATGGCATTGGCTTTGGAGAGAACCCTTTGACTCTAAAGGTCCTGGCCCGCATACATGGCAGAAGCAGTGAGTTACAAAAGCGGTTTGATATCCTTCTTAATGCAGGGCTTGAATTCTCACAGCTTTGTTTGATTATAAGCACAGCGCCAAAAATCCTGAATCAGAACCCAGAATATCTTGAAGAGAAAGTAAACTTTCTCTGCGGTGAAATGAAATCTTCATTAGAGTACCTCAATGTTTTTCCAGCATTTTTGTGTTTTGATTTGGAGAACCGGATAAAGCCTAGATACAGATTTTATGCATGGCTTAAAGAGAAGGGTTTGCATCCTGAAAGTTATTCCTTTGCAACCATGATTGCTACCAGTGAAAAGAGATTTGTAGCACAGGCCTTTACAATCCACCCAGCTGCTCCAAAACATTGGTTTGAGTGTTTCCTCATATAG

Protein Analysis

556

Amino Acids

64.58

Weight (kDa)

8.28

Isoelectric Point (pI)

33.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 239 - 339 1.2e-11 mTERF
mTERF PF02536 431 - 535 1.9e-16 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013458)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1364
Acc65I GGTACC 1 cut(s) 288
AccB1I GGYRCC 1 cut(s) 288
AccI GTMKAC 1 cut(s) 597
AccII CGCG 1 cut(s) 594
AciI CCGC 4 cut(s) 54, 1276, 1309, 1431
AclWI GGATC 1 cut(s) 1065
AcsI RAATTY 4 cut(s) 305, 1154, 1219, 1340
AfaI GTAC 5 cut(s) 104, 290, 1035, 1119, 1457
AfiI CCNNNNNNNGG 2 cut(s) 607, 811
AflIII ACRYGT 1 cut(s) 447
AjnI CCWGG 2 cut(s) 161, 1269
AjuI GAANNNNNNNTTGG 3 cut(s) 37, 362, 394
AluBI AGCT 6 cut(s) 270, 512, 830, 1109, 1351, 1634
AluI AGCT 6 cut(s) 270, 512, 830, 1109, 1351, 1634
Alw21I GWGCWC 1 cut(s) 192
Alw26I GTCTC 1 cut(s) 389
AlwI GGATC 1 cut(s) 1065
AoxI GGCC 2 cut(s) 1272, 1614
ApeKI GCWGC 2 cut(s) 410, 1634
ApoI RAATTY 4 cut(s) 305, 1154, 1219, 1340
ArsI GACNNNNNNTTYG 2 cut(s) 535, 567
Asp718I GGTACC 1 cut(s) 288
AspLEI GCGC 2 cut(s) 594, 1375
AspS9I GGNCC 4 cut(s) 165, 238, 1267, 1273
AsuC2I CCSGG 2 cut(s) 602, 806
AsuHPI GGTGA 5 cut(s) 29, 626, 733, 937, 1445
AsuNHI GCTAGC 1 cut(s) 1105
AvaII GGWCC 3 cut(s) 165, 238, 1267
AxyI CCTNAGG 1 cut(s) 284
BanI GGYRCC 1 cut(s) 288
BarI GAAGNNNNNNTAC 2 cut(s) 227, 259
BbsI GAAGAC 1 cut(s) 396
Bbv12I GWGCWC 1 cut(s) 192
BbvI GCAGC 2 cut(s) 397, 1621
BccI CCATC 4 cut(s) 125, 305, 712, 1003
BciT130I CCWGG 2 cut(s) 163, 1271
BciVI GTATCC 1 cut(s) 688
BcnI CCSGG 2 cut(s) 602, 806
BcoDI GTCTC 1 cut(s) 389
BfaI CTAG 4 cut(s) 513, 1080, 1106, 1512
BfmI CTRYAG 1 cut(s) 841
BfoI RGCGCY 1 cut(s) 1376
BfuI GTATCC 1 cut(s) 688
BisI GCNGC 3 cut(s) 54, 411, 1635
BlsI GCNGC 3 cut(s) 55, 412, 1636
Bme1390I CCNGG 4 cut(s) 163, 602, 806, 1271
Bme18I GGWCC 3 cut(s) 165, 238, 1267
BmgT120I GGNCC 4 cut(s) 165, 238, 1267, 1273
BmiI GGNNCC 4 cut(s) 167, 240, 281, 290
BmrFI CCNGG 4 cut(s) 163, 602, 806, 1271
BmsI GCATC 2 cut(s) 397, 1561
BmtI GCTAGC 1 cut(s) 1109
BpiI GAAGAC 1 cut(s) 396
BpuMI CCSGG 2 cut(s) 602, 806
BsaJI CCNNGG 2 cut(s) 440, 581
BsaWI WCCGGW 2 cut(s) 892, 1500
BsaXI ACNNNNNCTCC 4 cut(s) 29, 59, 524, 554
Bsc4I CCNNNNNNNGG 2 cut(s) 607, 811
Bse1I ACTGG 2 cut(s) 918, 1590
Bse21I CCTNAGG 1 cut(s) 284
Bse3DI GCAATG 1 cut(s) 1212
BseBI CCWGG 2 cut(s) 163, 1271
BseDI CCNNGG 2 cut(s) 440, 581
BseGI GGATG 6 cut(s) 412, 570, 640, 723, 871, 1552
BseLI CCNNNNNNNGG 2 cut(s) 607, 811
BseMI GCAATG 1 cut(s) 1212
BseMII CTCAG 2 cut(s) 298, 1135
BseNI ACTGG 2 cut(s) 918, 1590
BseRI GAGGAG 3 cut(s) 20, 485, 515
BseXI GCAGC 2 cut(s) 397, 1621
BseYI CCCAGC 1 cut(s) 1630
Bsh1236I CGCG 1 cut(s) 594
Bsh1285I CGRYCG 1 cut(s) 601
BshFI GGCC 2 cut(s) 1274, 1616
BshNI GGYRCC 1 cut(s) 288
BsiEI CGRYCG 1 cut(s) 601
BsiHKAI GWGCWC 1 cut(s) 192
BsiSI CCGG 4 cut(s) 601, 806, 893, 1501
BslFI GGGAC 5 cut(s) 68, 77, 151, 224, 236
BslI CCNNNNNNNGG 2 cut(s) 607, 811
BsmAI GTCTC 1 cut(s) 389
BsmFI GGGAC 5 cut(s) 68, 77, 151, 224, 236
BsnI GGCC 2 cut(s) 1274, 1616
Bsp1286I GDGCHC 1 cut(s) 192
Bsp143I GATC 1 cut(s) 1057
Bsp19I CCATGG 1 cut(s) 440
BspACI CCGC 4 cut(s) 54, 1276, 1309, 1431
BspANI GGCC 2 cut(s) 1274, 1616
BspCNI CTCAG 2 cut(s) 297, 1134
BspFNI CGCG 1 cut(s) 594
BspHI TCATGA 1 cut(s) 1063
BspLI GGNNCC 4 cut(s) 167, 240, 281, 290
BspOI GCTAGC 1 cut(s) 1109
BspPI GGATC 1 cut(s) 1065
BspT107I GGYRCC 1 cut(s) 288
BsrDI GCAATG 1 cut(s) 1212
BsrI ACTGG 2 cut(s) 918, 1590
BssECI CCNNGG 2 cut(s) 440, 581
BssMI GATC 1 cut(s) 1057
BssT1I CCWWGG 1 cut(s) 440
Bst2UI CCWGG 2 cut(s) 163, 1271
Bst4CI ACNGT 2 cut(s) 400, 925
Bst6I CTCTTC 5 cut(s) 26, 215, 638, 804, 1404
BstC8I GCNNGC 2 cut(s) 1107, 1276
BstDEI CTNAG 3 cut(s) 284, 422, 1121
BstDSI CCRYGG 1 cut(s) 440
BstF5I GGATG 6 cut(s) 412, 570, 640, 723, 871, 1552
BstFNI CGCG 1 cut(s) 594
BstH2I RGCGCY 1 cut(s) 1376
BstHHI GCGC 2 cut(s) 594, 1375
BstKTI GATC 1 cut(s) 1060
BstMAI GTCTC 1 cut(s) 389
BstMBI GATC 1 cut(s) 1057
BstMCI CGRYCG 1 cut(s) 601
BstMWI GCNNNNNNNGC 1 cut(s) 1284
BstNI CCWGG 2 cut(s) 163, 1271
BstNSI RCATGY 1 cut(s) 451
BstSCI CCNGG 4 cut(s) 161, 600, 804, 1269
BstSFI CTRYAG 1 cut(s) 841
BstUI CGCG 1 cut(s) 594
BstV1I GCAGC 2 cut(s) 397, 1621
BstV2I GAAGAC 1 cut(s) 396
BstX2I RGATCY 1 cut(s) 1057
BstXI CCANNNNNNTGG 1 cut(s) 1647
BstYI RGATCY 1 cut(s) 1057
Bsu36I CCTNAGG 1 cut(s) 284
BsuI GTATCC 1 cut(s) 688
BsuRI GGCC 2 cut(s) 1274, 1616
BtgI CCRYGG 1 cut(s) 440
BtgZI GCGATG 1 cut(s) 1022
BtsCI GGATG 6 cut(s) 412, 570, 640, 723, 871, 1552
BtsI GCAGTG 2 cut(s) 48, 1300
BtsIMutI CAGTG 5 cut(s) 48, 141, 1129, 1300, 1597
Cac8I GCNNGC 2 cut(s) 1107, 1276
CciI TCATGA 1 cut(s) 1063
CfoI GCGC 2 cut(s) 594, 1375
Cfr13I GGNCC 4 cut(s) 165, 238, 1267, 1273
CseI GACGC 1 cut(s) 583
CsiI ACCWGGT 1 cut(s) 161
Csp6I GTAC 5 cut(s) 103, 289, 1034, 1118, 1456
CviQI GTAC 5 cut(s) 103, 289, 1034, 1118, 1456
DdeI CTNAG 3 cut(s) 284, 422, 1121
DpnI GATC 1 cut(s) 1059
DpnII GATC 1 cut(s) 1057
Eam1104I CTCTTC 5 cut(s) 26, 215, 638, 804, 1404
EarI CTCTTC 5 cut(s) 26, 215, 638, 804, 1404
Eco130I CCWWGG 1 cut(s) 440
Eco147I AGGCCT 1 cut(s) 1616
Eco32I GATATC 3 cut(s) 930, 998, 1318
Eco47I GGWCC 3 cut(s) 165, 238, 1267
Eco81I CCTNAGG 1 cut(s) 284
EcoO109I RGGNCCY 3 cut(s) 165, 238, 1267
EcoRI GAATTC 1 cut(s) 1340
EcoRII CCWGG 2 cut(s) 161, 1269
EcoRV GATATC 3 cut(s) 930, 998, 1318
EcoT14I CCWWGG 1 cut(s) 440
EcoT22I ATGCAT 2 cut(s) 1230, 1531
ErhI CCWWGG 1 cut(s) 440
FalI AAGNNNNNCTT 6 cut(s) 365, 397, 501, 533, 985, 1017
FaqI GGGAC 5 cut(s) 68, 77, 151, 224, 236
FauI CCCGC 1 cut(s) 1283
FblI GTMKAC 1 cut(s) 597
Fnu4HI GCNGC 3 cut(s) 54, 411, 1635
FokI GGATG 6 cut(s) 419, 577, 647, 730, 878, 1539
Fsp4HI GCNGC 3 cut(s) 54, 411, 1635
FspBI CTAG 4 cut(s) 513, 1080, 1106, 1512
GlaI GCGC 2 cut(s) 593, 1374
GluI GCNGC 3 cut(s) 54, 411, 1635
GsaI CCCAGC 1 cut(s) 1634
HaeII RGCGCY 1 cut(s) 1376
HaeIII GGCC 2 cut(s) 1274, 1616
HapII CCGG 4 cut(s) 601, 806, 893, 1501
HgaI GACGC 1 cut(s) 583
HhaI GCGC 2 cut(s) 594, 1375
Hin6I GCGC 2 cut(s) 592, 1373
HinP1I GCGC 2 cut(s) 592, 1373
HincII GTYRAC 1 cut(s) 598
HindII GTYRAC 1 cut(s) 598
HindIII AAGCTT 1 cut(s) 268
HinfI GANTC 5 cut(s) 904, 988, 1127, 1258, 1387
HpaII CCGG 4 cut(s) 601, 806, 893, 1501
HphI GGTGA 5 cut(s) 29, 626, 733, 937, 1445
Hpy166II GTNNAC 3 cut(s) 543, 598, 1420
Hpy188I TCNGA 6 cut(s) 112, 388, 499, 825, 1132, 1392
Hpy188III TCNNGA 7 cut(s) 232, 274, 908, 1064, 1384, 1406, 1556
Hpy8I GTNNAC 3 cut(s) 543, 598, 1420
Hpy99I CGWCG 1 cut(s) 599
HpyAV CCTTC 6 cut(s) 229, 751, 853, 973, 1331, 1537
HpyCH4III ACNGT 2 cut(s) 400, 925
HpyCH4V TGCA 6 cut(s) 1205, 1228, 1331, 1529, 1552, 1574
HpyF10VI GCNNNNNNNGC 1 cut(s) 1284
HpyF3I CTNAG 3 cut(s) 284, 422, 1121
HspAI GCGC 2 cut(s) 592, 1373
KpnI GGTACC 1 cut(s) 292
Kzo9I GATC 1 cut(s) 1057
LmnI GCTCC 4 cut(s) 33, 472, 1171, 1642
Lsp1109I GCAGC 2 cut(s) 397, 1621
LweI GCATC 2 cut(s) 397, 1561
MabI ACCWGGT 1 cut(s) 161
MaeI CTAG 4 cut(s) 513, 1080, 1106, 1512
MaeIII GTNAC 1 cut(s) 1299
MalI GATC 1 cut(s) 1059
MboI GATC 1 cut(s) 1057
MfeI CAATTG 1 cut(s) 1100
MflI RGATCY 1 cut(s) 1057
MhlI GDGCHC 1 cut(s) 192
MlyI GAGTC 2 cut(s) 997, 1252
MmeI TCCRAC 1 cut(s) 612
Mph1103I ATGCAT 2 cut(s) 1230, 1531
MseI TTAA 4 cut(s) 528, 1086, 1326, 1536
MslI CAYNNNNRTG 1 cut(s) 1480
MspA1I CMGCKG 1 cut(s) 1634
MspI CCGG 4 cut(s) 601, 806, 893, 1501
MspR9I CCNGG 4 cut(s) 163, 602, 806, 1271
MunI CAATTG 1 cut(s) 1100
MvaI CCWGG 2 cut(s) 163, 1271
MvnI CGCG 1 cut(s) 594
MwoI GCNNNNNNNGC 1 cut(s) 1284
NciI CCSGG 2 cut(s) 602, 806
NcoI CCATGG 1 cut(s) 440
NdeII GATC 1 cut(s) 1057
NheI GCTAGC 1 cut(s) 1105
NlaIV GGNNCC 4 cut(s) 167, 240, 281, 290
NmeAIII GCCGAG 1 cut(s) 211
NsiI ATGCAT 2 cut(s) 1230, 1531
NspI RCATGY 1 cut(s) 451
PagI TCATGA 1 cut(s) 1063
PceI AGGCCT 1 cut(s) 1616
PciI ACATGT 1 cut(s) 447
PfeI GAWTC 3 cut(s) 904, 1127, 1387
PkrI GCNGC 3 cut(s) 55, 412, 1636
PleI GAGTC 2 cut(s) 996, 1252
PpsI GAGTC 2 cut(s) 996, 1252
PpuMI RGGWCCY 3 cut(s) 165, 238, 1267
PscI ACATGT 1 cut(s) 447
PsiI TTATAA 1 cut(s) 1364
Psp5II RGGWCCY 3 cut(s) 165, 238, 1267
Psp6I CCWGG 2 cut(s) 161, 1269
PspFI CCCAGC 1 cut(s) 1630
PspGI CCWGG 2 cut(s) 161, 1269
PspN4I GGNNCC 4 cut(s) 167, 240, 281, 290
PspPI GGNCC 4 cut(s) 165, 238, 1267, 1273
PspPPI RGGWCCY 3 cut(s) 165, 238, 1267
PsuI RGATCY 1 cut(s) 1057
PvuII CAGCTG 1 cut(s) 1634
RsaI GTAC 5 cut(s) 104, 290, 1035, 1119, 1457
RsaNI GTAC 5 cut(s) 103, 289, 1034, 1118, 1456
RseI CAYNNNNRTG 1 cut(s) 1480
SalI GTCGAC 1 cut(s) 596
SaqAI TTAA 4 cut(s) 528, 1086, 1326, 1536
SatI GCNGC 3 cut(s) 54, 411, 1635
Sau3AI GATC 1 cut(s) 1057
Sau96I GGNCC 4 cut(s) 165, 238, 1267, 1273
SchI GAGTC 2 cut(s) 997, 1252
ScrFI CCNGG 4 cut(s) 163, 602, 806, 1271
SduI GDGCHC 1 cut(s) 192
SexAI ACCWGGT 1 cut(s) 161
SfaNI GCATC 2 cut(s) 397, 1561
SfcI CTRYAG 1 cut(s) 841
SinI GGWCC 3 cut(s) 165, 238, 1267
SmiMI CAYNNNNRTG 1 cut(s) 1480
SseBI AGGCCT 1 cut(s) 1616
SsiI CCGC 4 cut(s) 54, 1276, 1309, 1431
SspMI CTAG 4 cut(s) 513, 1080, 1106, 1512
StuI AGGCCT 1 cut(s) 1616
StyD4I CCNGG 4 cut(s) 161, 600, 804, 1269
StyI CCWWGG 1 cut(s) 440
TaaI ACNGT 2 cut(s) 400, 925
TaqI TCGA 3 cut(s) 597, 681, 747
TatI WGTACW 2 cut(s) 102, 1117
TauI GCSGC 1 cut(s) 56
TfiI GAWTC 3 cut(s) 904, 1127, 1387
Tru1I TTAA 4 cut(s) 528, 1086, 1326, 1536
Tru9I TTAA 4 cut(s) 528, 1086, 1326, 1536
TscAI CASTG 5 cut(s) 55, 148, 1129, 1300, 1597
TseI GCWGC 2 cut(s) 410, 1634
TspGWI ACGGA 1 cut(s) 238
TspRI CASTG 5 cut(s) 55, 148, 1129, 1300, 1597
VpaK11BI GGWCC 3 cut(s) 165, 238, 1267
XapI RAATTY 4 cut(s) 305, 1154, 1219, 1340
XceI RCATGY 1 cut(s) 451
XmiI GTMKAC 1 cut(s) 597
XspI CTAG 4 cut(s) 513, 1080, 1106, 1512
Zsp2I ATGCAT 2 cut(s) 1230, 1531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.