MD00G1041100.v1.1
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
7272925 .. 7276133
3209 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1041100.v1.1.491

Sequence Viewer

Length: 1713 bp
ATGTCCCTCCCCAAATGCATCTACACCCTCCGCCTTTCCCACCACTTCTCCACCGCCACGAAAACCGCCTCCGCCGTAAGGCTCCCCAAACTCTCCAATGTCCCCACCAGATACAAGTCGGAAACCATCAAGCAAGCCCAGCAGGCCCTCACCGACTACCTCCACGCAACCAGATCCTTGTCCTTCCCCTCCGCCGAGCACATCAGCAAGAACTGCCTGTTTTCCCTCACCAATCTCATAAAAAAGATCGAGTTTTCGGTCCCGAAATTCTCGAACCGCTTCAAGAGGCTACTCAGGTACCACCCCATCAATGAATTTGAGTTTTTCTTTGAAAGCATTGGCATAGATTACAATCAAGTTTGTGACTTTTTGCCTCCCAACAAGTACTTTTTCTCTGAGGATGGGACCCTTTTGAATGTTGCTACTGAACTTTCGAGATTTGGGTTTCCTTGGAATATGTTAGGGAAGTTGTACGAGGAGGAGATTTCCATTTTTAGTGAGAGTTCCGAGGTGTTGAAAGCTAGGCTTAGTAGGTTGAAAGAATGTGGGTTTAGTAATCATTCAGTTGTGGGAATGTGCTTGGCTTTCCCTTATTTGCTGGCGGTGGAGGGTGAGCCGGGCGGTGATGCGGCATTGTTTGATGATTTCAAAAGGGTTCTTGTGGAGTTTAATATGGAGTACTGTGTTGAAGGAAATGTGGATGCTTGGTATGATGTTTGTAAGAAAGTTCGGGTGTTTTGCGATTTGGGTTGCGGGAAAGGGAAGATAGGGGAACTGATGGGGAGGAAGAAAGATGTTTTTCTTACTTGTCCAGCAGAGGTTTTGTGCCAGAAATCTAGGTACTTTTGTAGATTTGGTGTTAGGAAGGAAGATGTAGGTTTGTTCCTTCTTCAGAGTCCTGAGGTTTTAAATTTTGATCTGGAAACACCGAATATATCAGCATTGGGATTGTTGGAAATTTTTGGATTGAACGTGAAAGAAATAGAGGCTGTGATCGAAAAATACCCTCATGTGATGGGAAAAAATAAAATGGCTAATTTACCACATGTAATAAGGGCTCTCGATCTTCATGAATGGTTCTTCACTAAGATTAAGAATGAACCTCAATTGTTAGAAAATTATGTAATCAGTGATTTTGATGAAGACATTGCGAAAGAATTTGGTGAAGGATTGGAGAGGATTCAATCTACGACAACTCCCATTCATACAATGAGAAAATTGGACTTCATGCATAGCATTGGGTTTGGAGAGAACACTTTGACCCTAAAGGTCTTAGCCCACTTGCATGGTAGAAGTGGTGAGTTGCAAAAGCGGTTTGATAGCCTTTTTTCTACGGGCATTGATTTCTCCAGGCTTTGTCTGATGATAAGCACGACACCAAAGATCCTGAATCAGAATCCAGAATCTTTGGAAGCCAAAGTTAACTTTCTTTGCAAGGAAATGAAATCCTCTTTGGAGTACCTCAATATTTTTCCTGCATTTTTGTGTTTTGACTTAGAAAACCGGGTCAAGCCCAGATATAGATTTTACGTGTGGCTTAAAGAGAAGGGTTTGCATTCTGAAAGCTACTCTATTGCCACCATGATTGCTACTAGTGAAAAGCAATTTGTAGCACGGGCTTTTGGAATTCACCCAGCTGCTCCAAAGCATTGGTTTGAGCGTTTCTCATACAGAAGATCTTTTAAAAATTGTGCAGGGACATCTATACCATAG

Protein Analysis

571

Amino Acids

65.44

Weight (kDa)

8.33

Isoelectric Point (pI)

39.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 241 - 348 1.1e-08 mTERF
mTERF PF02536 432 - 536 1.4e-16 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013458)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 297
AccB1I GGYRCC 1 cut(s) 297
AclWI GGATC 2 cut(s) 168, 1378
AcsI RAATTY 6 cut(s) 266, 314, 910, 957, 1157, 1626
AcuI CTGAAG 1 cut(s) 875
AfaI GTAC 6 cut(s) 299, 386, 473, 680, 842, 1460
AfiI CCNNNNNNNGG 1 cut(s) 78
AflIII ACRYGT 2 cut(s) 1045, 1530
AgsI TTSAA 9 cut(s) 283, 332, 415, 517, 538, 649, 689, 970, 1184
AhlI ACTAGT 1 cut(s) 1592
AjnI CCWGG 1 cut(s) 1349
AjuI GAANNNNNNNTTGG 2 cut(s) 1436, 1468
AluBI AGCT 3 cut(s) 521, 1566, 1637
AluI AGCT 3 cut(s) 521, 1566, 1637
Alw21I GWGCWC 1 cut(s) 201
AlwI GGATC 2 cut(s) 168, 1378
AoxI GGCC 1 cut(s) 144
ApeKI GCWGC 1 cut(s) 1637
ApoI RAATTY 6 cut(s) 266, 314, 910, 957, 1157, 1626
Asp700I GAANNNNTTC 1 cut(s) 278
Asp718I GGTACC 1 cut(s) 297
AspS9I GGNCC 3 cut(s) 145, 259, 405
AsuC2I CCSGG 2 cut(s) 618, 1505
AsuHPI GGTGA 7 cut(s) 142, 220, 623, 635, 1175, 1310, 1622
AvaII GGWCC 2 cut(s) 259, 405
AxyI CCTNAGG 1 cut(s) 900
BaeI ACNNNNGTAYC 4 cut(s) 281, 314, 832, 865
BanI GGYRCC 1 cut(s) 297
BanII GRGCYC 1 cut(s) 1060
BbsI GAAGAC 1 cut(s) 1149
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 1 cut(s) 1624
BccI CCATC 5 cut(s) 134, 314, 395, 772, 1009
BceAI ACGGC 1 cut(s) 59
BciT130I CCWGG 1 cut(s) 1351
BcnI CCSGG 2 cut(s) 618, 1505
BcuI ACTAGT 1 cut(s) 1592
BfaI CTAG 3 cut(s) 522, 837, 1593
BglI GCCNNNNNGGC 1 cut(s) 143
BglII AGATCT 1 cut(s) 1676
BisI GCNGC 2 cut(s) 630, 1638
BlsI GCNGC 2 cut(s) 631, 1639
BmcAI AGTACT 2 cut(s) 386, 680
Bme1390I CCNGG 3 cut(s) 618, 1351, 1505
Bme18I GGWCC 2 cut(s) 259, 405
BmgT120I GGNCC 3 cut(s) 145, 259, 405
BmiI GGNNCC 5 cut(s) 83, 261, 299, 406, 407
BmrFI CCNGG 3 cut(s) 618, 1351, 1505
BmsI GCATC 3 cut(s) 27, 616, 691
BpiI GAAGAC 1 cut(s) 1149
BplI GAGNNNNNCTC 2 cut(s) 1649, 1681
BpmI CTGGAG 1 cut(s) 1333
BpuMI CCSGG 2 cut(s) 618, 1505
BsaAI YACGTR 1 cut(s) 1531
BsaBI GATNNNNATC 1 cut(s) 351
BsaJI CCNNGG 2 cut(s) 449, 507
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 1180, 1210
Bsc4I CCNNNNNNNGG 1 cut(s) 78
Bse21I CCTNAGG 1 cut(s) 900
Bse3DI GCAATG 1 cut(s) 1146
Bse8I GATNNNNATC 1 cut(s) 351
BseBI CCWGG 1 cut(s) 1351
BseDI CCNNGG 2 cut(s) 449, 507
BseGI GGATG 2 cut(s) 406, 706
BseJI GATNNNNATC 1 cut(s) 351
BseLI CCNNNNNNNGG 1 cut(s) 78
BseMI GCAATG 1 cut(s) 1146
BseMII CTCAG 3 cut(s) 307, 387, 891
BseRI GAGGAG 2 cut(s) 491, 494
BseXI GCAGC 1 cut(s) 1624
BseYI CCCAGC 2 cut(s) 138, 1633
BsgI GTGCAG 1 cut(s) 1713
BshFI GGCC 1 cut(s) 146
BshNI GGYRCC 1 cut(s) 297
BsiHKAI GWGCWC 1 cut(s) 201
BsiSI CCGG 2 cut(s) 617, 1504
BslFI GGGAC 3 cut(s) 86, 245, 418
BslI CCNNNNNNNGG 1 cut(s) 78
BsmFI GGGAC 3 cut(s) 86, 245, 418
BsmI GAATGC 1 cut(s) 1555
BsnI GGCC 1 cut(s) 146
Bsp1286I GDGCHC 2 cut(s) 201, 1060
Bsp143I GATC 7 cut(s) 173, 246, 916, 993, 1063, 1383, 1676
BspANI GGCC 1 cut(s) 146
BspCNI CTCAG 3 cut(s) 306, 388, 892
BspHI TCATGA 1 cut(s) 1069
BspLI GGNNCC 5 cut(s) 83, 261, 299, 406, 407
BspPI GGATC 2 cut(s) 168, 1378
BspT107I GGYRCC 1 cut(s) 297
BsrDI GCAATG 1 cut(s) 1146
BssECI CCNNGG 2 cut(s) 449, 507
BssMI GATC 7 cut(s) 173, 246, 916, 993, 1063, 1383, 1676
BssT1I CCWWGG 1 cut(s) 449
Bst2UI CCWGG 1 cut(s) 1351
Bst4CI ACNGT 1 cut(s) 683
BstAPI GCANNNNNTGC 1 cut(s) 213
BstBAI YACGTR 1 cut(s) 1531
BstC8I GCNNGC 3 cut(s) 135, 144, 600
BstDEI CTNAG 7 cut(s) 293, 396, 527, 900, 1086, 1273, 1495
BstF5I GGATG 2 cut(s) 406, 706
BstKTI GATC 7 cut(s) 176, 249, 919, 996, 1066, 1386, 1679
BstMBI GATC 7 cut(s) 173, 246, 916, 993, 1063, 1383, 1676
BstMWI GCNNNNNNNGC 3 cut(s) 139, 143, 213
BstNI CCWGG 1 cut(s) 1351
BstNSI RCATGY 1 cut(s) 1049
BstSCI CCNGG 3 cut(s) 616, 1349, 1503
BstV1I GCAGC 1 cut(s) 1624
BstV2I GAAGAC 1 cut(s) 1149
BstX2I RGATCY 3 cut(s) 173, 1383, 1676
BstXI CCANNNNNNTGG 2 cut(s) 1286, 1650
BstYI RGATCY 3 cut(s) 173, 1383, 1676
Bsu36I CCTNAGG 1 cut(s) 900
BsuRI GGCC 1 cut(s) 146
BtsCI GGATG 2 cut(s) 406, 706
BtsIMutI CAGTG 1 cut(s) 1135
Cac8I GCNNGC 3 cut(s) 135, 144, 600
CciI TCATGA 1 cut(s) 1069
Cfr13I GGNCC 3 cut(s) 145, 259, 405
Csp6I GTAC 6 cut(s) 298, 385, 472, 679, 841, 1459
CspCI CAANNNNNGTGG 2 cut(s) 1567, 1602
CviAII CATG 6 cut(s) 1010, 1046, 1070, 1228, 1286, 1582
CviQI GTAC 6 cut(s) 298, 385, 472, 679, 841, 1459
DdeI CTNAG 7 cut(s) 293, 396, 527, 900, 1086, 1273, 1495
DpnI GATC 7 cut(s) 175, 248, 918, 995, 1065, 1385, 1678
DpnII GATC 7 cut(s) 173, 246, 916, 993, 1063, 1383, 1676
DraI TTTAAA 2 cut(s) 909, 1684
EciI GGCGGA 3 cut(s) 20, 61, 181
Eco130I CCWWGG 1 cut(s) 449
Eco24I GRGCYC 1 cut(s) 1060
Eco47I GGWCC 2 cut(s) 259, 405
Eco57I CTGAAG 1 cut(s) 875
Eco81I CCTNAGG 1 cut(s) 900
EcoO109I RGGNCCY 2 cut(s) 145, 405
EcoRI GAATTC 1 cut(s) 1626
EcoRII CCWGG 1 cut(s) 1349
EcoT14I CCWWGG 1 cut(s) 449
EcoT22I ATGCAT 2 cut(s) 20, 1233
EcoT38I GRGCYC 1 cut(s) 1060
ErhI CCWWGG 1 cut(s) 449
FaeI CATG 6 cut(s) 1013, 1049, 1073, 1231, 1289, 1585
FalI AAGNNNNNCTT 2 cut(s) 510, 542
FaqI GGGAC 3 cut(s) 86, 245, 418
FatI CATG 6 cut(s) 1009, 1045, 1069, 1227, 1285, 1581
FauI CCCGC 1 cut(s) 746
Fnu4HI GCNGC 2 cut(s) 630, 1638
FokI GGATG 2 cut(s) 413, 713
FriOI GRGCYC 1 cut(s) 1060
Fsp4HI GCNGC 2 cut(s) 630, 1638
FspBI CTAG 3 cut(s) 522, 837, 1593
GluI GCNGC 2 cut(s) 630, 1638
GsaI CCCAGC 2 cut(s) 142, 1637
GsuI CTGGAG 1 cut(s) 1333
HaeIII GGCC 1 cut(s) 146
HapII CCGG 2 cut(s) 617, 1504
Hin1II CATG 6 cut(s) 1013, 1049, 1073, 1231, 1289, 1585
HincII GTYRAC 1 cut(s) 1423
HindII GTYRAC 1 cut(s) 1423
HinfI GANTC 5 cut(s) 895, 1180, 1390, 1396, 1403
HpaI GTTAAC 1 cut(s) 1423
HpaII CCGG 2 cut(s) 617, 1504
HphI GGTGA 7 cut(s) 142, 220, 623, 635, 1175, 1310, 1622
Hpy166II GTNNAC 1 cut(s) 1423
Hpy188I TCNGA 7 cut(s) 121, 397, 508, 894, 1362, 1395, 1561
Hpy8I GTNNAC 1 cut(s) 1423
HpyAV CCTTC 6 cut(s) 193, 683, 859, 896, 1160, 1540
HpyCH4III ACNGT 1 cut(s) 683
HpyCH4IV ACGT 2 cut(s) 972, 1530
HpyCH4V TGCA 8 cut(s) 18, 1231, 1285, 1306, 1434, 1478, 1555, 1694
HpyF10VI GCNNNNNNNGC 3 cut(s) 139, 143, 213
HpyF3I CTNAG 7 cut(s) 293, 396, 527, 900, 1086, 1273, 1495
HpySE526I ACGT 2 cut(s) 972, 1530
Hsp92II CATG 6 cut(s) 1013, 1049, 1073, 1231, 1289, 1585
KflI GGGWCCC 1 cut(s) 405
KpnI GGTACC 1 cut(s) 301
KspAI GTTAAC 1 cut(s) 1423
Kzo9I GATC 7 cut(s) 173, 246, 916, 993, 1063, 1383, 1676
LmnI GCTCC 2 cut(s) 87, 1645
Lsp1109I GCAGC 1 cut(s) 1624
LweI GCATC 3 cut(s) 27, 616, 691
MaeI CTAG 3 cut(s) 522, 837, 1593
MaeII ACGT 2 cut(s) 972, 1530
MaeIII GTNAC 1 cut(s) 362
MalI GATC 7 cut(s) 175, 248, 918, 995, 1065, 1385, 1678
MboI GATC 7 cut(s) 173, 246, 916, 993, 1063, 1383, 1676
MboII GAAGA 8 cut(s) 775, 799, 881, 881, 1058, 1072, 1154, 1686
MfeI CAATTG 1 cut(s) 1106
MflI RGATCY 3 cut(s) 173, 1383, 1676
MhlI GDGCHC 2 cut(s) 201, 1060
MlyI GAGTC 1 cut(s) 904
MmeI TCCRAC 2 cut(s) 99, 933
Mph1103I ATGCAT 2 cut(s) 20, 1233
MroXI GAANNNNTTC 1 cut(s) 278
MseI TTAA 6 cut(s) 669, 908, 1092, 1422, 1539, 1683
MslI CAYNNNNRTG 2 cut(s) 1284, 1483
MspA1I CMGCKG 1 cut(s) 1637
MspI CCGG 2 cut(s) 617, 1504
MspR9I CCNGG 3 cut(s) 618, 1351, 1505
MunI CAATTG 1 cut(s) 1106
Mva1269I GAATGC 1 cut(s) 1555
MvaI CCWGG 1 cut(s) 1351
MwoI GCNNNNNNNGC 3 cut(s) 139, 143, 213
NciI CCSGG 2 cut(s) 618, 1505
NdeII GATC 7 cut(s) 173, 246, 916, 993, 1063, 1383, 1676
NlaIII CATG 6 cut(s) 1013, 1049, 1073, 1231, 1289, 1585
NlaIV GGNNCC 5 cut(s) 83, 261, 299, 406, 407
NmeAIII GCCGAG 1 cut(s) 220
NmuCI GTSAC 1 cut(s) 362
NsiI ATGCAT 2 cut(s) 20, 1233
NspI RCATGY 1 cut(s) 1049
PagI TCATGA 1 cut(s) 1069
PciI ACATGT 1 cut(s) 1045
PctI GAATGC 1 cut(s) 1555
PdmI GAANNNNTTC 1 cut(s) 278
PfeI GAWTC 4 cut(s) 1180, 1390, 1396, 1403
PkrI GCNGC 2 cut(s) 631, 1639
PleI GAGTC 1 cut(s) 903
PpsI GAGTC 1 cut(s) 903
Ppu21I YACGTR 1 cut(s) 1531
PpuMI RGGWCCY 1 cut(s) 405
PscI ACATGT 1 cut(s) 1045
Psp5II RGGWCCY 1 cut(s) 405
Psp6I CCWGG 1 cut(s) 1349
PspFI CCCAGC 2 cut(s) 138, 1633
PspGI CCWGG 1 cut(s) 1349
PspN4I GGNNCC 5 cut(s) 83, 261, 299, 406, 407
PspPI GGNCC 3 cut(s) 145, 259, 405
PspPPI RGGWCCY 1 cut(s) 405
PsuI RGATCY 3 cut(s) 173, 1383, 1676
PvuII CAGCTG 1 cut(s) 1637
RsaI GTAC 6 cut(s) 299, 386, 473, 680, 842, 1460
RsaNI GTAC 6 cut(s) 298, 385, 472, 679, 841, 1459
RseI CAYNNNNRTG 2 cut(s) 1284, 1483
SaqAI TTAA 6 cut(s) 669, 908, 1092, 1422, 1539, 1683
SatI GCNGC 2 cut(s) 630, 1638
Sau3AI GATC 7 cut(s) 173, 246, 916, 993, 1063, 1383, 1676
Sau96I GGNCC 3 cut(s) 145, 259, 405
ScaI AGTACT 2 cut(s) 386, 680
SchI GAGTC 1 cut(s) 904
ScrFI CCNGG 3 cut(s) 618, 1351, 1505
SduI GDGCHC 2 cut(s) 201, 1060
SfaNI GCATC 3 cut(s) 27, 616, 691
SinI GGWCC 2 cut(s) 259, 405
SmiMI CAYNNNNRTG 2 cut(s) 1284, 1483
SpeI ACTAGT 1 cut(s) 1592
SspI AATATT 1 cut(s) 1468
SspMI CTAG 3 cut(s) 522, 837, 1593
StyD4I CCNGG 3 cut(s) 616, 1349, 1503
StyI CCWWGG 1 cut(s) 449
TaaI ACNGT 1 cut(s) 683
TaiI ACGT 2 cut(s) 975, 1533
TaqI TCGA 5 cut(s) 249, 272, 434, 996, 1062
TaqII GACCGA 1 cut(s) 247
TatI WGTACW 2 cut(s) 384, 678
TauI GCSGC 1 cut(s) 632
TfiI GAWTC 4 cut(s) 1180, 1390, 1396, 1403
Tru1I TTAA 6 cut(s) 669, 908, 1092, 1422, 1539, 1683
Tru9I TTAA 6 cut(s) 669, 908, 1092, 1422, 1539, 1683
TscAI CASTG 1 cut(s) 1135
TseFI GTSAC 1 cut(s) 362
TseI GCWGC 1 cut(s) 1637
Tsp45I GTSAC 1 cut(s) 362
TspDTI ATGAA 8 cut(s) 327, 1058, 1086, 1113, 1155, 1193, 1216, 1457
TspRI CASTG 1 cut(s) 1135
VpaK11BI GGWCC 2 cut(s) 259, 405
XapI RAATTY 6 cut(s) 266, 314, 910, 957, 1157, 1626
XceI RCATGY 1 cut(s) 1049
XmnI GAANNNNTTC 1 cut(s) 278
XspI CTAG 3 cut(s) 522, 837, 1593
ZrmI AGTACT 2 cut(s) 386, 680
Zsp2I ATGCAT 2 cut(s) 20, 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.