pycom09g19160
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
19937245 .. 19939023
1779 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g19160.1

Sequence Viewer

Length: 1779 bp
ATGGGATGTAAAACCAAGCCGAATACGAAATTACATGTTTTGCCCTTTAGAAGGAGTGAGAGCATGCCCCTGCCCAAATGCCTCTACGCCCTCCTCCTTTCCCACCATTTCTCCGCTGCAACAGCCGCCGCCGCCTCAGCCGCCGCAAGGCTCCCGAAGCTCCCCAATGTCCCCCCAAGGTACAAGTCCGAAGCCATCAGCCAAGCCCAGCAGGTCCTCACCGACTACCTCCACGCCACCCGCTGCTTGTCCTTCCCCTCCGCCGAGCACATCAGCAGAAACTCCCCCTTCTCCCTCGCCAATCTCATCAAGCAGATCAAATTTTCGACCCCGAGTTTCTCCAACCGCTTCGAGAGGTTCCTCAGGTACCACCCCATCAACGAATTTGAGTTTTTCTTTGAAAGCATAGGCATACATTACAGTCAAGTTCGTGACTTTTTGCCTCCCGACAAGTACTTTTTCTCTGAGGATCCGACCCTTTTGGATGTTGCTTCGCTACTTTCCGGGTTTGGGTTTCCTTGGAATATGATAGGGAAGTTGTATGAGGAGGAGAATTCGATTTTTAGTGAGAGTTCAGAGGTGTTGAAAGCTAGGCTTACTAGGTTGAAGAAATGTGGGTTCAGCAACCATTCTGTTGTGGGTATGTGCTTGGCTTTCCCTCATTTGCTGCTGCTGGAGGGCGAGCCGGGCGGTGATACTACGGATTTGCTTGTTGATTTGAAAAGGGTTCTTGTGGATTTTAATTTGGAAAATTGTGTTGAGGGAAATGTGGATGCTTGGTATGGTGTTTGTAAGAAAGTTCGTGTGTTTTACGATTTGGGTTGCAAGAAAGGGAAGGTAGGGGAATTGATGGGGAGGAAGAAAGACATTTTTCTTGAATGCTCGGAAGAGGTTTTGTTGCAGAAATCAAACTACTTTCATAAATTTGGTGTTAGGATGGAAGATGTCGGGTTGCTGCTTCTTCAAAGTCCGGAGGTTTTGAACCTTGACCTGGAAACGCCGGAGATATCAGCATTGGGGTTGCTGAAACATTTTGGATTGAACGCGAAAGAATTGGAGGTGGTGAGTGAAAAGTACCCTCATGTGATGGGAAAGAATAGAATGGCTAATTTACCACATTTAGTAAGGGCCCTGGATCTTCATCAATGGTTCTTCACTAAGATTAAGAATGAACATAAATTGTTAGCTAATTACGTTATCAGTGACTTCGATGAAGGCATCGCAAAAGAATTTAGTGAAGGATTGGAGAGGATCCAATCTACGACGACTCCCATTCATACAATGGGAAAACTGGATTTCATGCATAGAATCGGGTTTGGAGAGAACCCTTTGACGCTAATGTGCTTATTCCAGTTGCATGGCAGAAGCAGCGAGTTACAAAAGCGGTTTGATATCCTTCTTTCGACGGGCATTGAATTCTCACGGCTTTGTTCAATGATAAGAATGAAACCGAAGATCTTGAATCAGAGTCCAGAATTTCTAGAAGCAAAAGTAAGCTTTCTTAGTGAGGAAATGAAATCTTCTTTGGAGTACCTCAATACTTTTCCATCATTTCTTTGTTTCAACTTGGAGAACCGGATCATGCCCAGATATAGATTTTATGTGTGGCTCAAAGAGAAGAAGGGTTTGCATTTTGAAAGCTACTCTATTGCCACCATGATTGCTACCAGCGAGAAGACGTTTGTAGCGCGGGTTTCTGGAATTCATCCAGCTGCGCCGAAACACTGGTTCGAGCGTTTCTCGTACAGAAAATATTTAGGTACTTGGAGACATCTGTGA

Protein Analysis

593

Amino Acids

68.0

Weight (kDa)

8.78

Isoelectric Point (pI)

40.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 265 - 367 8.1e-10 mTERF
mTERF PF02536 456 - 561 2.1e-15 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013458)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 202
Acc65I GGTACC 1 cut(s) 366
AccB1I GGYRCC 1 cut(s) 366
AccII CGCG 2 cut(s) 1046, 1690
AccIII TCCGGA 1 cut(s) 970
AclWI GGATC 6 cut(s) 464, 477, 1143, 1246, 1259, 1586
AcsI RAATTY 8 cut(s) 320, 383, 553, 923, 1229, 1415, 1475, 1701
AfaI GTAC 7 cut(s) 182, 368, 455, 1076, 1532, 1745, 1762
AfiI CCNNNNNNNGG 4 cut(s) 51, 147, 510, 991
AflIII ACRYGT 1 cut(s) 34
AjnI CCWGG 2 cut(s) 990, 1131
AjuI GAANNNNNNNTTGG 2 cut(s) 1508, 1540
AluBI AGCT 6 cut(s) 160, 590, 1187, 1497, 1641, 1712
AluI AGCT 6 cut(s) 160, 590, 1187, 1497, 1641, 1712
Alw21I GWGCWC 1 cut(s) 270
Alw26I GTCTC 1 cut(s) 1762
AlwI GGATC 6 cut(s) 464, 477, 1143, 1246, 1259, 1586
Ama87I CYCGRG 1 cut(s) 331
Aor13HI TCCGGA 1 cut(s) 970
AoxI GGCC 1 cut(s) 1128
ApaI GGGCCC 1 cut(s) 1132
ApeKI GCWGC 7 cut(s) 116, 243, 667, 670, 955, 1368, 1712
ApoI RAATTY 8 cut(s) 320, 383, 553, 923, 1229, 1415, 1475, 1701
Asp718I GGTACC 1 cut(s) 366
AspLEI GCGC 2 cut(s) 1690, 1717
AspS9I GGNCC 3 cut(s) 214, 1128, 1129
AsuC2I CCSGG 2 cut(s) 505, 687
AsuHPI GGTGA 3 cut(s) 211, 704, 1075
AvaI CYCGRG 1 cut(s) 331
AvaII GGWCC 1 cut(s) 214
AxyI CCTNAGG 1 cut(s) 362
BaeGI GKGCMC 1 cut(s) 1132
BamHI GGATCC 2 cut(s) 469, 1251
BanI GGYRCC 1 cut(s) 366
BanII GRGCYC 1 cut(s) 1132
BbsI GAAGAC 1 cut(s) 1682
Bbv12I GWGCWC 1 cut(s) 270
BbvCI CCTCAGC 1 cut(s) 136
BbvI GCAGC 7 cut(s) 103, 230, 654, 657, 942, 1380, 1699
BccI CCATC 6 cut(s) 203, 383, 844, 931, 1081, 1555
BceAI ACGGC 1 cut(s) 1439
BciT130I CCWGG 2 cut(s) 992, 1133
BcnI CCSGG 2 cut(s) 505, 687
BcoDI GTCTC 1 cut(s) 1762
BfaI CTAG 3 cut(s) 591, 600, 1481
BfuAI ACCTGC 1 cut(s) 202
BglII AGATCT 1 cut(s) 1455
BmcAI AGTACT 1 cut(s) 455
Bme1390I CCNGG 4 cut(s) 505, 687, 992, 1133
Bme18I GGWCC 1 cut(s) 214
BmeT110I CYCGRG 1 cut(s) 331
BmgT120I GGNCC 3 cut(s) 214, 1128, 1129
BmiI GGNNCC 6 cut(s) 152, 359, 368, 471, 1130, 1253
BmrFI CCNGG 4 cut(s) 505, 687, 992, 1133
BmsI GCATC 2 cut(s) 763, 1227
BpiI GAAGAC 1 cut(s) 1682
BplI GAGNNNNNCTC 2 cut(s) 1724, 1756
BpmI CTGGAG 1 cut(s) 695
Bpu10I CCTNAGC 1 cut(s) 136
BpuMI CCSGG 2 cut(s) 505, 687
BsaBI GATNNNNATC 1 cut(s) 1140
BsaJI CCNNGG 3 cut(s) 176, 518, 1131
BsaWI WCCGGW 2 cut(s) 970, 1575
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 1252, 1282
Bsc4I CCNNNNNNNGG 4 cut(s) 51, 147, 510, 991
Bse1I ACTGG 3 cut(s) 1296, 1351, 1730
Bse21I CCTNAGG 1 cut(s) 362
Bse8I GATNNNNATC 1 cut(s) 1140
BseAI TCCGGA 1 cut(s) 970
BseBI CCWGG 2 cut(s) 992, 1133
BseDI CCNNGG 3 cut(s) 176, 518, 1131
BseGI GGATG 5 cut(s) 11, 490, 778, 942, 1705
BseJI GATNNNNATC 1 cut(s) 1140
BseLI CCNNNNNNNGG 4 cut(s) 51, 147, 510, 991
BseMII CTCAG 3 cut(s) 150, 376, 456
BseNI ACTGG 3 cut(s) 1296, 1351, 1730
BseRI GAGGAG 3 cut(s) 83, 560, 563
BseSI GKGCMC 1 cut(s) 1132
BseXI GCAGC 7 cut(s) 103, 230, 654, 657, 942, 1380, 1699
BseYI CCCAGC 1 cut(s) 207
Bsh1236I CGCG 2 cut(s) 1046, 1690
BshFI GGCC 1 cut(s) 1130
BshNI GGYRCC 1 cut(s) 366
BsiHKAI GWGCWC 1 cut(s) 270
BsiHKCI CYCGRG 1 cut(s) 331
BsiSI CCGG 5 cut(s) 504, 686, 971, 1001, 1576
BslFI GGGAC 1 cut(s) 155
BslI CCNNNNNNNGG 4 cut(s) 51, 147, 510, 991
BsmAI GTCTC 1 cut(s) 1762
BsmFI GGGAC 1 cut(s) 155
BsmI GAATGC 1 cut(s) 884
BsnI GGCC 1 cut(s) 1130
BsoBI CYCGRG 1 cut(s) 331
Bsp120I GGGCCC 1 cut(s) 1128
Bsp1286I GDGCHC 2 cut(s) 270, 1132
Bsp13I TCCGGA 1 cut(s) 970
Bsp143I GATC 6 cut(s) 315, 469, 1135, 1251, 1455, 1578
BspANI GGCC 1 cut(s) 1130
BspCNI CTCAG 3 cut(s) 149, 375, 457
BspEI TCCGGA 1 cut(s) 970
BspFNI CGCG 2 cut(s) 1046, 1690
BspLI GGNNCC 6 cut(s) 152, 359, 368, 471, 1130, 1253
BspMI ACCTGC 1 cut(s) 202
BspPI GGATC 6 cut(s) 464, 477, 1143, 1246, 1259, 1586
BspT107I GGYRCC 1 cut(s) 366
BsrI ACTGG 3 cut(s) 1296, 1351, 1730
BssECI CCNNGG 3 cut(s) 176, 518, 1131
BssMI GATC 6 cut(s) 315, 469, 1135, 1251, 1455, 1578
BssT1I CCWWGG 2 cut(s) 176, 518
Bst2UI CCWGG 2 cut(s) 992, 1133
Bst4CI ACNGT 1 cut(s) 422
Bst6I CTCTTC 1 cut(s) 882
BstC8I GCNNGC 2 cut(s) 65, 683
BstDEI CTNAG 5 cut(s) 136, 362, 465, 1158, 1502
BstENI CCTNNNNNAGG 1 cut(s) 49
BstF5I GGATG 5 cut(s) 11, 490, 778, 942, 1705
BstFNI CGCG 2 cut(s) 1046, 1690
BstHHI GCGC 2 cut(s) 1690, 1717
BstKTI GATC 6 cut(s) 318, 472, 1138, 1254, 1458, 1581
BstMAI GTCTC 1 cut(s) 1762
BstMBI GATC 6 cut(s) 315, 469, 1135, 1251, 1455, 1578
BstMWI GCNNNNNNNGC 8 cut(s) 122, 125, 131, 137, 140, 157, 687, 1368
BstNI CCWGG 2 cut(s) 992, 1133
BstNSI RCATGY 2 cut(s) 38, 67
BstSCI CCNGG 4 cut(s) 503, 685, 990, 1131
BstSLI GKGCMC 1 cut(s) 1132
BstUI CGCG 2 cut(s) 1046, 1690
BstV1I GCAGC 7 cut(s) 103, 230, 654, 657, 942, 1380, 1699
BstV2I GAAGAC 1 cut(s) 1682
BstX2I RGATCY 4 cut(s) 469, 1135, 1251, 1455
BstXI CCANNNNNNTGG 1 cut(s) 1358
BstYI RGATCY 4 cut(s) 469, 1135, 1251, 1455
Bsu36I CCTNAGG 1 cut(s) 362
BsuRI GGCC 1 cut(s) 1130
BtgZI GCGATG 1 cut(s) 1204
BtsCI GGATG 5 cut(s) 11, 490, 778, 942, 1705
BtsIMutI CAGTG 2 cut(s) 1207, 1723
BveI ACCTGC 1 cut(s) 202
Cac8I GCNNGC 2 cut(s) 65, 683
CfoI GCGC 2 cut(s) 1690, 1717
Cfr13I GGNCC 3 cut(s) 214, 1128, 1129
CseI GACGC 1 cut(s) 1342
Csp6I GTAC 7 cut(s) 181, 367, 454, 1075, 1531, 1744, 1761
CspCI CAANNNNNGTGG 2 cut(s) 1642, 1677
CviAII CATG 7 cut(s) 35, 64, 1082, 1300, 1358, 1582, 1657
CviQI GTAC 7 cut(s) 181, 367, 454, 1075, 1531, 1744, 1761
DdeI CTNAG 5 cut(s) 136, 362, 465, 1158, 1502
DpnI GATC 6 cut(s) 317, 471, 1137, 1253, 1457, 1580
DpnII GATC 6 cut(s) 315, 469, 1135, 1251, 1455, 1578
Eam1104I CTCTTC 1 cut(s) 882
EarI CTCTTC 1 cut(s) 882
EciI GGCGGA 1 cut(s) 250
Eco130I CCWWGG 2 cut(s) 176, 518
Eco24I GRGCYC 1 cut(s) 1132
Eco32I GATATC 2 cut(s) 1008, 1393
Eco47I GGWCC 1 cut(s) 214
Eco81I CCTNAGG 1 cut(s) 362
Eco88I CYCGRG 1 cut(s) 331
EcoNI CCTNNNNNAGG 1 cut(s) 49
EcoO109I RGGNCCY 3 cut(s) 214, 1128, 1129
EcoRI GAATTC 3 cut(s) 553, 1415, 1701
EcoRII CCWGG 2 cut(s) 990, 1131
EcoRV GATATC 2 cut(s) 1008, 1393
EcoT14I CCWWGG 2 cut(s) 176, 518
EcoT22I ATGCAT 1 cut(s) 1305
EcoT38I GRGCYC 1 cut(s) 1132
ErhI CCWWGG 2 cut(s) 176, 518
FaeI CATG 7 cut(s) 38, 67, 1085, 1303, 1361, 1585, 1660
FalI AAGNNNNNCTT 2 cut(s) 579, 611
FaqI GGGAC 1 cut(s) 155
FatI CATG 7 cut(s) 34, 63, 1081, 1299, 1357, 1581, 1656
FauI CCCGC 2 cut(s) 248, 1683
FokI GGATG 5 cut(s) 18, 497, 785, 949, 1692
FriOI GRGCYC 1 cut(s) 1132
FspBI CTAG 3 cut(s) 591, 600, 1481
GlaI GCGC 2 cut(s) 1689, 1716
GsaI CCCAGC 1 cut(s) 211
GsuI CTGGAG 1 cut(s) 695
HaeIII GGCC 1 cut(s) 1130
HapII CCGG 5 cut(s) 504, 686, 971, 1001, 1576
HgaI GACGC 1 cut(s) 1342
HhaI GCGC 2 cut(s) 1690, 1717
Hin1II CATG 7 cut(s) 38, 67, 1085, 1303, 1361, 1585, 1660
Hin6I GCGC 2 cut(s) 1688, 1715
HinP1I GCGC 2 cut(s) 1688, 1715
HindIII AAGCTT 1 cut(s) 1495
HinfI GANTC 4 cut(s) 1267, 1308, 1462, 1468
HpaII CCGG 5 cut(s) 504, 686, 971, 1001, 1576
HphI GGTGA 3 cut(s) 211, 704, 1075
Hpy188I TCNGA 6 cut(s) 190, 466, 474, 577, 886, 1467
Hpy99I CGWCG 2 cut(s) 1267, 1408
HpyAV CCTTC 8 cut(s) 45, 262, 298, 829, 1208, 1232, 1406, 1615
HpyCH4III ACNGT 1 cut(s) 422
HpyCH4IV ACGT 2 cut(s) 1194, 1679
HpyCH4V TGCA 6 cut(s) 119, 825, 901, 1303, 1357, 1630
HpyF10VI GCNNNNNNNGC 8 cut(s) 122, 125, 131, 137, 140, 157, 687, 1368
HpyF3I CTNAG 5 cut(s) 136, 362, 465, 1158, 1502
HpySE526I ACGT 2 cut(s) 1194, 1679
Hsp92II CATG 7 cut(s) 38, 67, 1085, 1303, 1361, 1585, 1660
HspAI GCGC 2 cut(s) 1688, 1715
Kpn2I TCCGGA 1 cut(s) 970
KpnI GGTACC 1 cut(s) 370
Kzo9I GATC 6 cut(s) 315, 469, 1135, 1251, 1455, 1578
LmnI GCTCC 2 cut(s) 156, 165
Lsp1109I GCAGC 7 cut(s) 103, 230, 654, 657, 942, 1380, 1699
LweI GCATC 2 cut(s) 763, 1227
MaeI CTAG 3 cut(s) 591, 600, 1481
MaeII ACGT 2 cut(s) 1194, 1679
MaeIII GTNAC 3 cut(s) 431, 1202, 1374
MalI GATC 6 cut(s) 317, 471, 1137, 1253, 1457, 1580
MboI GATC 6 cut(s) 315, 469, 1135, 1251, 1455, 1578
MflI RGATCY 4 cut(s) 469, 1135, 1251, 1455
MhlI GDGCHC 2 cut(s) 270, 1132
MlyI GAGTC 2 cut(s) 1261, 1477
MmeI TCCRAC 2 cut(s) 366, 497
Mph1103I ATGCAT 1 cut(s) 1305
MroI TCCGGA 1 cut(s) 970
MseI TTAA 2 cut(s) 741, 1164
MspA1I CMGCKG 3 cut(s) 116, 243, 1712
MspI CCGG 5 cut(s) 504, 686, 971, 1001, 1576
MspR9I CCNGG 4 cut(s) 505, 687, 992, 1133
Mva1269I GAATGC 1 cut(s) 884
MvaI CCWGG 2 cut(s) 992, 1133
MvnI CGCG 2 cut(s) 1046, 1690
MwoI GCNNNNNNNGC 8 cut(s) 122, 125, 131, 137, 140, 157, 687, 1368
NciI CCSGG 2 cut(s) 505, 687
NdeII GATC 6 cut(s) 315, 469, 1135, 1251, 1455, 1578
NlaIII CATG 7 cut(s) 38, 67, 1085, 1303, 1361, 1585, 1660
NlaIV GGNNCC 6 cut(s) 152, 359, 368, 471, 1130, 1253
NmeAIII GCCGAG 1 cut(s) 289
NmuCI GTSAC 2 cut(s) 431, 1202
NsiI ATGCAT 1 cut(s) 1305
NspI RCATGY 2 cut(s) 38, 67
PaeI GCATGC 1 cut(s) 67
PciI ACATGT 1 cut(s) 34
PctI GAATGC 1 cut(s) 884
PfeI GAWTC 2 cut(s) 1308, 1462
PleI GAGTC 2 cut(s) 1261, 1476
PpsI GAGTC 2 cut(s) 1261, 1476
PpuMI RGGWCCY 1 cut(s) 214
PscI ACATGT 1 cut(s) 34
Psp5II RGGWCCY 1 cut(s) 214
Psp6I CCWGG 2 cut(s) 990, 1131
PspFI CCCAGC 1 cut(s) 207
PspGI CCWGG 2 cut(s) 990, 1131
PspN4I GGNNCC 6 cut(s) 152, 359, 368, 471, 1130, 1253
PspOMI GGGCCC 1 cut(s) 1128
PspPI GGNCC 3 cut(s) 214, 1128, 1129
PspPPI RGGWCCY 1 cut(s) 214
PsuI RGATCY 4 cut(s) 469, 1135, 1251, 1455
PvuII CAGCTG 1 cut(s) 1712
RsaI GTAC 7 cut(s) 182, 368, 455, 1076, 1532, 1745, 1762
RsaNI GTAC 7 cut(s) 181, 367, 454, 1075, 1531, 1744, 1761
SaqAI TTAA 2 cut(s) 741, 1164
Sau3AI GATC 6 cut(s) 315, 469, 1135, 1251, 1455, 1578
Sau96I GGNCC 3 cut(s) 214, 1128, 1129
ScaI AGTACT 1 cut(s) 455
SchI GAGTC 2 cut(s) 1261, 1477
ScrFI CCNGG 4 cut(s) 505, 687, 992, 1133
SduI GDGCHC 2 cut(s) 270, 1132
SfaNI GCATC 2 cut(s) 763, 1227
SinI GGWCC 1 cut(s) 214
SphI GCATGC 1 cut(s) 67
SspI AATATT 1 cut(s) 1754
SspMI CTAG 3 cut(s) 591, 600, 1481
StyD4I CCNGG 4 cut(s) 503, 685, 990, 1131
StyI CCWWGG 2 cut(s) 176, 518
TaaI ACNGT 1 cut(s) 422
TaiI ACGT 2 cut(s) 1197, 1682
TaqI TCGA 6 cut(s) 326, 351, 557, 1209, 1403, 1731
TatI WGTACW 1 cut(s) 453
TauI GCSGC 5 cut(s) 128, 131, 134, 143, 146
TfiI GAWTC 2 cut(s) 1308, 1462
Tru1I TTAA 2 cut(s) 741, 1164
Tru9I TTAA 2 cut(s) 741, 1164
TscAI CASTG 2 cut(s) 1207, 1730
TseFI GTSAC 2 cut(s) 431, 1202
TseI GCWGC 7 cut(s) 116, 243, 667, 670, 955, 1368, 1712
Tsp45I GTSAC 2 cut(s) 431, 1202
TspDTI ATGAA 9 cut(s) 908, 1130, 1185, 1227, 1265, 1288, 1460, 1529, 1694
TspGWI ACGGA 1 cut(s) 716
TspRI CASTG 2 cut(s) 1207, 1730
VpaK11BI GGWCC 1 cut(s) 214
XagI CCTNNNNNAGG 1 cut(s) 49
XapI RAATTY 8 cut(s) 320, 383, 553, 923, 1229, 1415, 1475, 1701
XbaI TCTAGA 1 cut(s) 1480
XceI RCATGY 2 cut(s) 38, 67
XcmI CCANNNNNNNNNTGG 1 cut(s) 1279
XspI CTAG 3 cut(s) 591, 600, 1481
ZrmI AGTACT 1 cut(s) 455
Zsp2I ATGCAT 1 cut(s) 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.