AT4G01290

isoform X1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
537418 .. 543939
6522 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G01290.1

Sequence Viewer

Length: 2976 bp
ATGATGAGTATAGCAAATGAACAACAATTTGCCATGGATCAACTTGTCGAAACCAATGATGATTCGGAAAAGAAACCAAGAATTACATACACGAGGAAGTTTCTTATATCCTTGAGCGAGAAAGACGTTTGCAAGAAGCTGCCAAATCTGCCTGGTGAATTTGATGAAGCACTGTTGCTTGACTTCGAAGATCCTTCACCCGAGCGAGCAAGAATTTCAGGCGATTTTTCGTCGCATGGTTTCAGGCGGAATGACTATAGTTCATCGCCTCCCACCAGGGGGGAATTAGGTACTAACTCTCGAGGCACCCATGGAAGATGGGAAGGGCGCTCTGGTGGATGGAATGATAAAGATAGTGATTCACAGTCAGACCGGGACTCAGGAGAGCCTGGAAGGCGTTCTGGTATGCCATCTCGGAGGTCTTGGCAAGCACCTGAGCATGATGGACTTCTTGGGAAAGGTTCTTTCCCTAAGCCTTCTGGATTTGGTGCGGGAACATCTGCCCCTAGACCTCAATCTAATGACTCACATCAGCTGAGTAGAACCAATGAACCTTACCATCCTCCTCGCCCATACAAGGCGCCACCTTTCACTAGACGTGACGCTAGAGATTCATTCAATGATGAAACATTTGGTTCTTCTGATTCTACTAGTGAAGATAGAGCAGAAGAAGAAAGAAAAAGAAGAGCTTCTTTTGAGTTGTTGAGGAAGGAACATCAAAAAGCATTCCAGGAGAGACAAAAATCAAACCCAGACTTACGCAAAAACGACTTTGATTTTACTGAACTTCTTGGGGAGTCCAAAGATGATAAAGGGCGTCCAAGTAGAAGTGATGAAGTCAATCACGCTCCAACAATTCCTGGTTCTAGTAACACCTCTTTGCCTTCTCAAAGTAATGCACCCAGACCGCTTGTACCTCCTGGTTTTGCAAGCACAATTTTGGAAAAAAAGCAAGGGGAAAAACCTCAAACTGAAACTTCTCAATATGAGCGGAGTCCTTTAAATTCCAAAGGCATTAATGTGGTGAATGGAACATCAGTTAATAATGGGGGAAAACCGTTGGGAATTAAGATAGGTTCAAGTGAGATGCTAATAGAAGGTGAAGATGTTCGTGTCTCCTCCACTGATGCAAATGAACGGGCTGTTAATATCTCTTCACTTCTAGGAATATCTACAGATACAGTTAATAAGGATAAAAGTTTTGAAAAGCTTTCCTCGATCTCGACTCCTACTGAAATTCAGGGGTATCCTATAAAAAGTGAGAAAGCTACAATGACGCTGGGCAAGAAGAAAAGCTTGGAGCATTCAGATGGGCCATCAATTCTGGATAAGATATTCAACACGGCTATAAATTTGAATAGTGGTGACTCCTCTAATATGAATAAGAAAAATGTCGAAAAAGTAGAAGAAATACGAAGCCCTCAGACCATTAATAAATCCTCCAAGTTCGCTCATCTATTTCTTGAAGAAGATAACAAACCAGTCGAAGTTCTCCCATCCAGCGAGCCACCAAGAGGCTTACTGTCACTACTTCAAGGTGCAGATAAATTGCAAACATTTGACACAAAAGCAAATCCCGACCTTTCAACGGATTTTCCTTTTCAAGGCCATGCCACTAAAAGAACTGATCAGTTAAGCAGCACTTCCACAACTAAATCAGTAACAGCTGTTCCACCTGTTCTCACTTGTGAAGACCTTGAGCAGTCTATTCTGTCAGAAGTCGGTGACAGCTATCATCCACCTCCACCGCCAGTTGACCAAGACACGAGTGTTCCTTCAGTAAAAATGACCAAACAACGGAAAACATCTGTTGATGACCAGGCTTCGCAGCACCTTCTTTCTTTATTACAGAGAAGTTCAGACCCAAAAAGTCAAGATACGCAGCTACTTTCAGCTACAGAGAGGAGACCACCACCACCATCTATGAAAACAACTACACCACCACCATCTGTGAAATCAACTACAGCTGGAGAAGCAGATCCAGGGAAGTCTTTGACTCTTGAGAATTTATTTGGGAGTGCCTTCATGAACGAACTGCAGTCGATTGGAGAACCTGTCTCTGGAAGAGCTATGGTTTCTGATGCTCCAGGGGTCCCGCTTCGATCAGAAAGGTCAATTGGTGAACTGAGCCAAAGAAACCAAATCAGACCTGACGGTCCCCCCGGAGGGGTACTAGCCCTTCCAGAAGATGGTAACTTACTTGCAGTTGGCGGTCATGCAAACCCATCAAAATACATGTCTTTTCCAGGATCTCATAATCAAGAGCCTGAAGTAGCTTTCAACATCTCTGACAAGTTAGCTGCCTTGAACTCTGGTCCAAGGAACGAAAGACCAACAATGGGTGGTCAAGATGGTCTTTTTCTCCACCAACATCCCCAACAATACGTGACCAACCCCTCGTCTCACTTGAATGGTTCAGGCCCAGTATTCCATCCGTTCGATTCACAACATGCTCATGTAAAACCTCAGCTCGATTTCATGGGACCAGGAAGCACTATGTCTCAACATCATGACCCTCCACCAAATCACCGGTTTCCACCAAACATGATTCACCGTCCACCTTTCCATCATACACCAACCAGTGGACATCCCGAGTTTGATCGTCTTCCTCCACATATGATGCAGAAGATGCATATGCAAGACAACCTGCAACATCATCATCTAATGCAAGGATTCCCCGGTAGTGGTCCACAACCCCATCACTCTCCTCATGTAAACAACCAGATGCCGGGTCTCATTCCTGAGTTAAACCCGTCACAAGGCTTTCCCTTTGCCCATCGCCAGCCCAACTACGGTATGCCACCACCAGGTTCTCAAGTCAACAGAGGAGAGCATCCAGCTTCACTGCAGACACTCTTGGGGATTCAGCAGAGGATGGACCCAGCCAAACAGATACCGGCAGTGGGTCAAGCCGGTGGTCCTAATCGTCAAGGCTCTGTGGGTCATGAACTCGACCTTGGGTTTGGCTACAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

991

Amino Acids

108.55

Weight (kDa)

6.36

Isoelectric Point (pI)

59.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011486)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2154
Acc36I ACCTGC 1 cut(s) 2655
AccB1I GGYRCC 2 cut(s) 305, 580
AccB7I CCANNNNNTGG 2 cut(s) 2189, 2582
AccBSI CCGCTC 1 cut(s) 991
AciI CCGC 7 cut(s) 247, 491, 908, 991, 1748, 2096, 2211
AclWI GGATC 4 cut(s) 45, 185, 1973, 2257
AcsI RAATTY 6 cut(s) 158, 213, 1003, 1236, 1351, 2005
AcuI CTGAAG 2 cut(s) 1761, 2289
AcyI GRCGYC 2 cut(s) 581, 817
AfaI GTAC 3 cut(s) 292, 915, 2172
AflIII ACRYGT 1 cut(s) 2235
AgeI ACCGGT 1 cut(s) 2529
AhlI ACTAGT 1 cut(s) 650
AjiI CACGTC 1 cut(s) 599
AjuI GAANNNNNNNTTGG 6 cut(s) 1280, 1312, 2100, 2132, 2940, 2972
Alw26I GTCTC 7 cut(s) 730, 1120, 1900, 2062, 2406, 2505, 2738
AlwI GGATC 4 cut(s) 45, 185, 1973, 2257
Ama87I CYCGRG 3 cut(s) 200, 300, 2591
AoxI GGCC 3 cut(s) 1313, 1606, 2419
ApeKI GCWGC 5 cut(s) 139, 1638, 1828, 1882, 2300
ApoI RAATTY 6 cut(s) 158, 213, 1003, 1236, 1351, 2005
ArsI GACNNNNNNTTYG 3 cut(s) 2222, 2254, 2945
AseI ATTAAT 2 cut(s) 1017, 1431
AsiGI ACCGGT 1 cut(s) 2529
Asp700I GAANNNNTTC 3 cut(s) 397, 688, 1107
AspLEI GCGC 2 cut(s) 330, 583
AspS9I GGNCC 9 cut(s) 1313, 2092, 2156, 2315, 2420, 2483, 2687, 2878, 2918
AsuC2I CCSGG 4 cut(s) 374, 2163, 2679, 2730
AsuHPI GGTGA 9 cut(s) 167, 189, 1036, 1112, 1376, 1736, 2132, 2519, 2543
AsuII TTCGAA 1 cut(s) 186
AvaI CYCGRG 3 cut(s) 200, 300, 2591
AvaII GGWCC 7 cut(s) 2092, 2156, 2315, 2483, 2687, 2878, 2918
BanI GGYRCC 2 cut(s) 305, 580
BarI GAAGNNNNNNTAC 2 cut(s) 2163, 2195
BauI CACGAG 2 cut(s) 91, 1765
BbsI GAAGAC 2 cut(s) 1698, 2597
BbvCI CCTCAGC 1 cut(s) 2466
BbvI GCAGC 5 cut(s) 126, 1650, 1840, 1894, 2287
BceAI ACGGC 1 cut(s) 1359
BciVI GTATCC 1 cut(s) 1257
BclI TGATCA 1 cut(s) 1627
BcnI CCSGG 4 cut(s) 374, 2163, 2679, 2730
BcoDI GTCTC 7 cut(s) 730, 1120, 1900, 2062, 2406, 2505, 2738
BcuI ACTAGT 1 cut(s) 650
BfaI CTAG 7 cut(s) 507, 594, 606, 651, 867, 1163, 2174
BfmI CTRYAG 7 cut(s) 256, 1173, 1896, 1962, 2036, 2846, 2968
BfoI RGCGCY 2 cut(s) 331, 584
BfuAI ACCTGC 1 cut(s) 2655
BfuI GTATCC 1 cut(s) 1257
BglI GCCNNNNNGGC 1 cut(s) 394
BisI GCNGC 5 cut(s) 140, 1639, 1829, 1883, 2301
BlsI GCNGC 5 cut(s) 141, 1640, 1830, 1884, 2302
Bme18I GGWCC 7 cut(s) 2092, 2156, 2315, 2483, 2687, 2878, 2918
BmeT110I CYCGRG 3 cut(s) 200, 300, 2591
BmgBI CACGTC 1 cut(s) 599
BmgT120I GGNCC 9 cut(s) 1313, 2092, 2156, 2315, 2420, 2483, 2687, 2878, 2918
BmiI GGNNCC 7 cut(s) 307, 582, 2093, 2094, 2158, 2484, 2880
BmrI ACTGGG 1 cut(s) 2417
BmsI GCATC 7 cut(s) 1077, 1117, 2071, 2610, 2619, 2715, 2842
BmuI ACTGGG 1 cut(s) 2417
BpiI GAAGAC 2 cut(s) 1698, 2597
BpmI CTGGAG 2 cut(s) 1989, 2070
Bpu10I CCTNAGC 3 cut(s) 435, 471, 2466
Bpu14I TTCGAA 1 cut(s) 186
BpuEI CTTGAG 4 cut(s) 133, 1718, 2021, 2799
BpuMI CCSGG 4 cut(s) 374, 2163, 2679, 2730
BsaAI YACGTR 1 cut(s) 2386
BsaHI GRCGYC 2 cut(s) 581, 817
BsaI GGTCTC 2 cut(s) 1900, 2738
BsaJI CCNNGG 9 cut(s) 33, 276, 310, 1982, 2087, 2161, 2318, 2677, 2956
BsaWI WCCGGW 1 cut(s) 2529
BsaXI ACNNNNNCTCC 2 cut(s) 2040, 2070
Bse118I RCCGGY 3 cut(s) 2529, 2896, 2912
Bse1I ACTGG 4 cut(s) 1481, 1751, 2423, 2580
BseDI CCNNGG 9 cut(s) 33, 276, 310, 1982, 2087, 2161, 2318, 2677, 2956
BseGI GGATG 9 cut(s) 344, 559, 1496, 1735, 2371, 2431, 2587, 2833, 2880
BseMII CTCAG 7 cut(s) 393, 426, 527, 1436, 2117, 2480, 2733
BseNI ACTGG 4 cut(s) 1481, 1751, 2423, 2580
BseRI GAGGAG 6 cut(s) 555, 1108, 1360, 1918, 2697, 2841
BseXI GCAGC 5 cut(s) 126, 1650, 1840, 1894, 2287
BseYI CCCAGC 2 cut(s) 1279, 2881
BsgI GTGCAG 1 cut(s) 1560
BshFI GGCC 3 cut(s) 1315, 1608, 2421
BshNI GGYRCC 2 cut(s) 305, 580
BshTI ACCGGT 1 cut(s) 2529
BsiHKCI CYCGRG 3 cut(s) 200, 300, 2591
BsiSI CCGG 7 cut(s) 373, 2163, 2530, 2679, 2729, 2897, 2913
BslFI GGGAC 4 cut(s) 389, 2078, 2142, 2496
BsmAI GTCTC 7 cut(s) 730, 1120, 1900, 2062, 2406, 2505, 2738
BsmBI CGTCTC 1 cut(s) 2406
BsmFI GGGAC 4 cut(s) 389, 2078, 2142, 2496
BsmI GAATGC 2 cut(s) 725, 1303
BsnI GGCC 3 cut(s) 1315, 1608, 2421
Bso31I GGTCTC 2 cut(s) 1900, 2738
BsoBI CYCGRG 3 cut(s) 200, 300, 2591
Bsp119I TTCGAA 1 cut(s) 186
Bsp143I GATC 8 cut(s) 37, 190, 1218, 1627, 1978, 2102, 2249, 2599
Bsp19I CCATGG 2 cut(s) 33, 310
BspACI CCGC 7 cut(s) 247, 491, 908, 991, 1748, 2096, 2211
BspANI GGCC 3 cut(s) 1315, 1608, 2421
BspCNI CTCAG 7 cut(s) 392, 427, 528, 1435, 2118, 2479, 2734
BspHI TCATGA 3 cut(s) 2025, 2509, 2944
BspLI GGNNCC 7 cut(s) 307, 582, 2093, 2094, 2158, 2484, 2880
BspMAI CTGCAG 2 cut(s) 2040, 2850
BspMI ACCTGC 1 cut(s) 2655
BspPI GGATC 4 cut(s) 45, 185, 1973, 2257
BspQI GCTCTTC 2 cut(s) 679, 2059
BspT104I TTCGAA 1 cut(s) 186
BspT107I GGYRCC 2 cut(s) 305, 580
BspTNI GGTCTC 2 cut(s) 1900, 2738
BsrBI CCGCTC 1 cut(s) 991
BsrFI RCCGGY 3 cut(s) 2529, 2896, 2912
BsrI ACTGG 4 cut(s) 1481, 1751, 2423, 2580
BssAI RCCGGY 3 cut(s) 2529, 2896, 2912
BssECI CCNNGG 9 cut(s) 33, 276, 310, 1982, 2087, 2161, 2318, 2677, 2956
BssMI GATC 8 cut(s) 37, 190, 1218, 1627, 1978, 2102, 2249, 2599
BssNI GRCGYC 2 cut(s) 581, 817
BssSI CACGAG 2 cut(s) 91, 1765
BssT1I CCWWGG 4 cut(s) 33, 310, 2318, 2956
Bst2BI CACGAG 2 cut(s) 91, 1765
Bst4CI ACNGT 8 cut(s) 174, 366, 1059, 1183, 1524, 2156, 2555, 2795
Bst6I CTCTTC 3 cut(s) 679, 1159, 2059
BstACI GRCGYC 2 cut(s) 581, 817
BstAPI GCANNNNNTGC 1 cut(s) 2629
BstBAI YACGTR 1 cut(s) 2386
BstBI TTCGAA 1 cut(s) 186
BstC8I GCNNGC 5 cut(s) 207, 429, 931, 1505, 2783
BstDEI CTNAG 8 cut(s) 379, 435, 471, 536, 1422, 2126, 2466, 2742
BstDSI CCRYGG 2 cut(s) 33, 310
BstENI CCTNNNNNAGG 1 cut(s) 1602
BstF5I GGATG 9 cut(s) 344, 559, 1496, 1735, 2371, 2431, 2587, 2833, 2880
BstH2I RGCGCY 2 cut(s) 331, 584
BstHHI GCGC 2 cut(s) 330, 583
BstKTI GATC 8 cut(s) 40, 193, 1221, 1630, 1981, 2105, 2252, 2602
BstMAI GTCTC 7 cut(s) 730, 1120, 1900, 2062, 2406, 2505, 2738
BstMBI GATC 8 cut(s) 37, 190, 1218, 1627, 1978, 2102, 2249, 2599
BstMWI GCNNNNNNNGC 4 cut(s) 148, 394, 1973, 2629
BstNSI RCATGY 2 cut(s) 2239, 2453
BstSFI CTRYAG 7 cut(s) 256, 1173, 1896, 1962, 2036, 2846, 2968
BstV1I GCAGC 5 cut(s) 126, 1650, 1840, 1894, 2287
BstV2I GAAGAC 2 cut(s) 1698, 2597
BstX2I RGATCY 3 cut(s) 190, 1978, 2249
BstYI RGATCY 3 cut(s) 190, 1978, 2249
BsuI GTATCC 1 cut(s) 1257
BsuRI GGCC 3 cut(s) 1315, 1608, 2421
BtgI CCRYGG 2 cut(s) 33, 310
BtgZI GCGATG 2 cut(s) 249, 2762
BtrI CACGTC 1 cut(s) 599
BtsCI GGATG 9 cut(s) 344, 559, 1496, 1735, 2371, 2431, 2587, 2833, 2880
BtsI GCAGTG 2 cut(s) 2843, 2907
BtsIMutI CAGTG 5 cut(s) 170, 1122, 2587, 2843, 2907
BveI ACCTGC 1 cut(s) 2655
Cac8I GCNNGC 5 cut(s) 207, 429, 931, 1505, 2783
CciI TCATGA 3 cut(s) 2025, 2509, 2944
CfoI GCGC 2 cut(s) 330, 583
Cfr10I RCCGGY 3 cut(s) 2529, 2896, 2912
Cfr13I GGNCC 9 cut(s) 1313, 2092, 2156, 2315, 2420, 2483, 2687, 2878, 2918
CseI GACGC 3 cut(s) 611, 806, 1285
CsiI ACCWGGT 1 cut(s) 2806
Csp6I GTAC 3 cut(s) 291, 914, 2171
CspAI ACCGGT 1 cut(s) 2529
CviQI GTAC 3 cut(s) 291, 914, 2171
DdeI CTNAG 8 cut(s) 379, 435, 471, 536, 1422, 2126, 2466, 2742
DinI GGCGCC 1 cut(s) 582
DpnI GATC 8 cut(s) 39, 192, 1220, 1629, 1980, 2104, 2251, 2601
DpnII GATC 8 cut(s) 37, 190, 1218, 1627, 1978, 2102, 2249, 2599
DraI TTTAAA 1 cut(s) 1002
DrdI GACNNNNNNGTC 1 cut(s) 2154
DseDI GACNNNNNNGTC 1 cut(s) 2154
Eam1104I CTCTTC 3 cut(s) 679, 1159, 2059
EarI CTCTTC 3 cut(s) 679, 1159, 2059
EciI GGCGGA 1 cut(s) 262
Eco130I CCWWGG 4 cut(s) 33, 310, 2318, 2956
Eco31I GGTCTC 2 cut(s) 1900, 2738
Eco47I GGWCC 7 cut(s) 2092, 2156, 2315, 2483, 2687, 2878, 2918
Eco57I CTGAAG 2 cut(s) 1761, 2289
Eco88I CYCGRG 3 cut(s) 200, 300, 2591
EcoNI CCTNNNNNAGG 1 cut(s) 1602
EcoO109I RGGNCCY 1 cut(s) 2092
EcoT14I CCWWGG 4 cut(s) 33, 310, 2318, 2956
EcoT22I ATGCAT 1 cut(s) 2634
EgeI GGCGCC 1 cut(s) 582
EheI GGCGCC 1 cut(s) 582
ErhI CCWWGG 4 cut(s) 33, 310, 2318, 2956
Esp3I CGTCTC 1 cut(s) 2406
FaqI GGGAC 4 cut(s) 389, 2078, 2142, 2496
FauI CCCGC 2 cut(s) 484, 2103
FauNDI CATATG 2 cut(s) 2616, 2634
FbaI TGATCA 1 cut(s) 1627
Fnu4HI GCNGC 5 cut(s) 140, 1639, 1829, 1883, 2301
FokI GGATG 9 cut(s) 351, 546, 1483, 1722, 2358, 2418, 2574, 2820, 2887
Fsp4HI GCNGC 5 cut(s) 140, 1639, 1829, 1883, 2301
FspBI CTAG 7 cut(s) 507, 594, 606, 651, 867, 1163, 2174
GlaI GCGC 2 cut(s) 329, 582
GluI GCNGC 5 cut(s) 140, 1639, 1829, 1883, 2301
GsaI CCCAGC 2 cut(s) 1283, 2885
GsuI CTGGAG 2 cut(s) 1989, 2070
HaeII RGCGCY 2 cut(s) 331, 584
HaeIII GGCC 3 cut(s) 1315, 1608, 2421
HapII CCGG 7 cut(s) 373, 2163, 2530, 2679, 2729, 2897, 2913
HgaI GACGC 3 cut(s) 611, 806, 1285
HhaI GCGC 2 cut(s) 330, 583
Hin1I GRCGYC 2 cut(s) 581, 817
Hin6I GCGC 2 cut(s) 328, 581
HinP1I GCGC 2 cut(s) 328, 581
HincII GTYRAC 2 cut(s) 1756, 2821
HindII GTYRAC 2 cut(s) 1756, 2821
HindIII AAGCTT 2 cut(s) 1208, 1294
HpaII CCGG 7 cut(s) 373, 2163, 2530, 2679, 2729, 2897, 2913
HphI GGTGA 9 cut(s) 167, 189, 1036, 1112, 1376, 1736, 2132, 2519, 2543
Hpy166II GTNNAC 7 cut(s) 1756, 2123, 2558, 2585, 2690, 2716, 2821
Hpy8I GTNNAC 7 cut(s) 1756, 2123, 2558, 2585, 2690, 2716, 2821
Hpy99I CGWCG 1 cut(s) 235
HpyCH4III ACNGT 8 cut(s) 174, 366, 1059, 1183, 1524, 2156, 2555, 2795
HpyCH4IV ACGT 3 cut(s) 126, 598, 2385
HpyF10VI GCNNNNNNNGC 4 cut(s) 148, 394, 1973, 2629
HpyF3I CTNAG 8 cut(s) 379, 435, 471, 536, 1422, 2126, 2466, 2742
HpySE526I ACGT 3 cut(s) 126, 598, 2385
Hsp92I GRCGYC 2 cut(s) 581, 817
HspAI GCGC 2 cut(s) 328, 581
KasI GGCGCC 1 cut(s) 580
KflI GGGWCCC 1 cut(s) 2092
Ksp22I TGATCA 1 cut(s) 1627
Kzo9I GATC 8 cut(s) 37, 190, 1218, 1627, 1978, 2102, 2249, 2599
LguI GCTCTTC 2 cut(s) 679, 2059
LmnI GCTCC 3 cut(s) 853, 1300, 2089
Lsp1109I GCAGC 5 cut(s) 126, 1650, 1840, 1894, 2287
LweI GCATC 7 cut(s) 1077, 1117, 2071, 2610, 2619, 2715, 2842
MabI ACCWGGT 1 cut(s) 2806
MaeI CTAG 7 cut(s) 507, 594, 606, 651, 867, 1163, 2174
MaeII ACGT 3 cut(s) 126, 598, 2385
MaeIII GTNAC 9 cut(s) 599, 869, 1364, 1524, 1660, 1724, 2192, 2386, 2754
MalI GATC 8 cut(s) 39, 192, 1220, 1629, 1980, 2104, 2251, 2601
MbiI CCGCTC 1 cut(s) 991
MboI GATC 8 cut(s) 37, 190, 1218, 1627, 1978, 2102, 2249, 2599
MfeI CAATTG 1 cut(s) 2115
MflI RGATCY 3 cut(s) 190, 1978, 2249
Mly113I GGCGCC 1 cut(s) 581
MlyI GAGTC 7 cut(s) 371, 518, 806, 1003, 1219, 1361, 1990
MmeI TCCRAC 1 cut(s) 875
Mph1103I ATGCAT 1 cut(s) 2634
MroXI GAANNNNTTC 3 cut(s) 397, 688, 1107
MseI TTAA 9 cut(s) 1001, 1017, 1041, 1068, 1146, 1185, 1431, 1634, 2747
MslI CAYNNNNRTG 4 cut(s) 1019, 1308, 2409, 2454
MspA1I CMGCKG 3 cut(s) 535, 1667, 1967
MspI CCGG 7 cut(s) 373, 2163, 2530, 2679, 2729, 2897, 2913
MunI CAATTG 1 cut(s) 2115
Mva1269I GAATGC 2 cut(s) 725, 1303
MwoI GCNNNNNNNGC 4 cut(s) 148, 394, 1973, 2629
NarI GGCGCC 1 cut(s) 581
NciI CCSGG 4 cut(s) 374, 2163, 2679, 2730
NcoI CCATGG 2 cut(s) 33, 310
NdeI CATATG 2 cut(s) 2616, 2634
NdeII GATC 8 cut(s) 37, 190, 1218, 1627, 1978, 2102, 2249, 2599
NlaIV GGNNCC 7 cut(s) 307, 582, 2093, 2094, 2158, 2484, 2880
NmuCI GTSAC 6 cut(s) 599, 1364, 1524, 1724, 2386, 2754
NsiI ATGCAT 1 cut(s) 2634
NspI RCATGY 2 cut(s) 2239, 2453
NspV TTCGAA 1 cut(s) 186
PaeR7I CTCGAG 1 cut(s) 300
PagI TCATGA 3 cut(s) 2025, 2509, 2944
PciI ACATGT 1 cut(s) 2235
PciSI GCTCTTC 2 cut(s) 679, 2059
PctI GAATGC 2 cut(s) 725, 1303
PdmI GAANNNNTTC 3 cut(s) 397, 688, 1107
PfeI GAWTC 8 cut(s) 62, 359, 611, 644, 2441, 2548, 2673, 2863
PflMI CCANNNNNTGG 2 cut(s) 2189, 2582
PfoI TCCNGGA 2 cut(s) 729, 2245
PinAI ACCGGT 1 cut(s) 2529
PkrI GCNGC 5 cut(s) 141, 1640, 1830, 1884, 2302
PleI GAGTC 7 cut(s) 371, 518, 805, 1002, 1219, 1361, 1990
PluTI GGCGCC 1 cut(s) 584
PpsI GAGTC 7 cut(s) 371, 518, 805, 1002, 1219, 1361, 1990
Ppu21I YACGTR 1 cut(s) 2386
PpuMI RGGWCCY 1 cut(s) 2092
PscI ACATGT 1 cut(s) 2235
PshBI ATTAAT 2 cut(s) 1017, 1431
Psp5II RGGWCCY 1 cut(s) 2092
PspFI CCCAGC 2 cut(s) 1279, 2881
PspN4I GGNNCC 7 cut(s) 307, 582, 2093, 2094, 2158, 2484, 2880
PspPI GGNCC 9 cut(s) 1313, 2092, 2156, 2315, 2420, 2483, 2687, 2878, 2918
PspPPI RGGWCCY 1 cut(s) 2092
PsrI GAACNNNNNNTAC 2 cut(s) 1653, 1685
PstI CTGCAG 2 cut(s) 2040, 2850
PsuI RGATCY 3 cut(s) 190, 1978, 2249
PvuII CAGCTG 3 cut(s) 535, 1667, 1967
RsaI GTAC 3 cut(s) 292, 915, 2172
RsaNI GTAC 3 cut(s) 291, 914, 2171
RseI CAYNNNNRTG 4 cut(s) 1019, 1308, 2409, 2454
SapI GCTCTTC 2 cut(s) 679, 2059
SaqAI TTAA 9 cut(s) 1001, 1017, 1041, 1068, 1146, 1185, 1431, 1634, 2747
SatI GCNGC 5 cut(s) 140, 1639, 1829, 1883, 2301
Sau3AI GATC 8 cut(s) 37, 190, 1218, 1627, 1978, 2102, 2249, 2599
Sau96I GGNCC 9 cut(s) 1313, 2092, 2156, 2315, 2420, 2483, 2687, 2878, 2918
SchI GAGTC 7 cut(s) 371, 518, 806, 1003, 1219, 1361, 1990
SexAI ACCWGGT 1 cut(s) 2806
SfaNI GCATC 7 cut(s) 1077, 1117, 2071, 2610, 2619, 2715, 2842
SfcI CTRYAG 7 cut(s) 256, 1173, 1896, 1962, 2036, 2846, 2968
SfoI GGCGCC 1 cut(s) 582
Sfr274I CTCGAG 1 cut(s) 300
SfuI TTCGAA 1 cut(s) 186
SinI GGWCC 7 cut(s) 2092, 2156, 2315, 2483, 2687, 2878, 2918
SlaI CTCGAG 1 cut(s) 300
SmiMI CAYNNNNRTG 4 cut(s) 1019, 1308, 2409, 2454
SmlI CTYRAG 5 cut(s) 112, 300, 1697, 2000, 2814
SmoI CTYRAG 5 cut(s) 112, 300, 1697, 2000, 2814
SpeI ACTAGT 1 cut(s) 650
SsiI CCGC 7 cut(s) 247, 491, 908, 991, 1748, 2096, 2211
SspDI GGCGCC 1 cut(s) 580
SspMI CTAG 7 cut(s) 507, 594, 606, 651, 867, 1163, 2174
StyI CCWWGG 4 cut(s) 33, 310, 2318, 2956
TaaI ACNGT 8 cut(s) 174, 366, 1059, 1183, 1524, 2156, 2555, 2795
TaiI ACGT 3 cut(s) 129, 601, 2388
TfiI GAWTC 8 cut(s) 62, 359, 611, 644, 2441, 2548, 2673, 2863
Tru1I TTAA 9 cut(s) 1001, 1017, 1041, 1068, 1146, 1185, 1431, 1634, 2747
Tru9I TTAA 9 cut(s) 1001, 1017, 1041, 1068, 1146, 1185, 1431, 1634, 2747
TscAI CASTG 5 cut(s) 177, 1129, 2587, 2850, 2907
TseFI GTSAC 6 cut(s) 599, 1364, 1524, 1724, 2386, 2754
TseI GCWGC 5 cut(s) 139, 1638, 1828, 1882, 2300
Tsp45I GTSAC 6 cut(s) 599, 1364, 1524, 1724, 2386, 2754
TspGWI ACGGA 3 cut(s) 1604, 1813, 2424
TspRI CASTG 5 cut(s) 177, 1129, 2587, 2850, 2907
Van91I CCANNNNNTGG 2 cut(s) 2189, 2582
VpaK11BI GGWCC 7 cut(s) 2092, 2156, 2315, 2483, 2687, 2878, 2918
VspI ATTAAT 2 cut(s) 1017, 1431
XagI CCTNNNNNAGG 1 cut(s) 1602
XapI RAATTY 6 cut(s) 158, 213, 1003, 1236, 1351, 2005
XceI RCATGY 2 cut(s) 2239, 2453
XhoI CTCGAG 1 cut(s) 300
XmnI GAANNNNTTC 3 cut(s) 397, 688, 1107
XspI CTAG 7 cut(s) 507, 594, 606, 651, 867, 1163, 2174
Zsp2I ATGCAT 1 cut(s) 2634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.