Rmu_sc0011531.1_g000003

isoform X1

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011531.1
Physical Location & Seq
Reverse (-)
6599 .. 12314
5716 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011531.1_g000003.1.cds

Sequence Viewer

Length: 3261 bp
atgagcttagagaacgaagaccaacatttaccggatcagcccgccgaaacgaatcatgaagttaataagaagttgaaaatatcgtatacgagggagttccttctgtcattgagtgagttagaatcctgcaagaagttgccagatgggttcgaccggtcattcctaagtgaattcgaggatgctttcagagggcaaaggccatctagtggtttgtcagcaaatagtttcaggcgaaatgattatggttcatcacctcctactagaggtgatgcagctggttattcacgactgcctcatggaaggtgggaaagtcgttcttctggacgcagtgataaagatagtgacacgcaatctgacaaggactctgattctggaaggcactatgggaaccaggctcggcggccttggcaggtccctgagcatgatggacttctcggaagtggttcctttccaagaccagctgggtttgctggagggatagcggcacctaaagttcgacctaatgatacctaccaactaaatagaagcaatgaaccatatcagcctccccgtccttataaagcaccacctctcacacgaaaggagattaccgactcacttaatgatgaaacttttggttcctctgagtatacaaatgaggatagagcagaagaggaaagaaagagaagagattcctttgaactaatgaggaaagagcagcagaaagcatttcaagaaaagcagaagctgaagccagagaagaataaaggtggctttgatttttctacgctgttggatgatgataccaaagaggaaaagaaacttttgccgaggagcagtgaaattgctgagcctcggctaccaccagcatcaaataatgatggggaaaagtctaatttacccttgcaaactcctgcatccagacctcttgtgccccctggttttactagcacagttttggaaagaaatcttggaacaaaatccttgaaccatccccatcaagtggaggttgggaattctggacttgaggataacattctacatggcaaaagtaaccgtgttgtaaatggtacttctgataatcgagtggaaaaacaaccggttgagcaaatggttttgggcaagcagcctcatgcaagtgcaagtactcatgcttcatttgatagtatgagtgaaaagagtctaaatttgttaccacctcaaggtgcttataataagataattggcgtggatagtcaattatataataaagctaatacaccacaagctttagaagcttccagaaatagtgaagtgtttgagatcgatgctgaaaaggtgaccaattctacttcaatactggaaaagcttttcagcggtgcggtacctttaaatggtgttggctcgtcaaatatcattgagcctcatgatagcaaagtggatgaggcactgggccctcacattgtcaactcttcaaagtttgctcagtggtttcatgaagaagacaagaaacctgctaatgagatcttatccggaaggccaaatgacttgctttccttgatcgttggtagtgaaaaagctggacctcatatttctgatgggaagctacgcgatcacagttttcttagttttccctcccaaaactctgaacctgcagagaggcttttgacatcaaacatagtatctcctccagttggtgactctgagcatatgtacaaaagtattaaaccagaggcagtttcagcagtccttacatgtgaagaccttgagcagtcgattctatctgaaattagtgacagtggtccgaccttgcagccccctgttcaaaggtcagttgtacctgatagaaaggctgagcagccaaaggccaaagtagataatcatgcatcgcagcacctactctcactgttacagaagggaacaggcttaaaagatattgaaccatctttgaatcaagagacagcatcttcggagaaaattcacaacattgatgggacagttgttggcactgcacgtcacatttcaaaagagaaaaatgctgaaaatgcttctgatccagggaagagtctaacgcttgaaacactatttggaactgctttcatgaaggagttgcaatcagttggagcaccagtttctacgaaaagaggccttgttgggtccgcaagagtagatgttctggagcctcatgggttaccttttccagtatcagacaatagttttgttccttctgcaattgatgttggacctaacacgagtaatcatagtaacagtgacatgacagcaaatagaaggaagcaaaccaaatcagataagatcgatgagcagttgctaggttttgataatcctcaaattgacctagattcattacaggttagaactgacttggggtctaagattggcgtctttgatgggcctgcggatattcgacttcctgaagaggatagcttaattaccgtcagtgaacctttaaacatccaaaattttatgtctaccgggaatctagtgaaaagcaaagtattctcctccccaaacacagaagttgacattgttgagaaattggcagctttgaactctgccttcaaggatgaaaggtctatcatgggaagccaagaaggtccaccttttctccgtggcccttatgatatgagacagcctgatattccttatcagaaccataatgttcaaccttcttcacaacagctccatcatcctcaaatgaatcataggggaactttttttcatccatcagattctcatcctggcaatgccaactctcagatgaattttatgacgccagagggtatgatccgaaatgatcctcctcaaagtcatcagtttcctgcaaatatgctccgtccacctttccatcatgcgaacactggacaatctgggtttgatgctcatcatcaccctatgttgcaacagatgcatatggcaggaaactttcctccgcctcacttgctacaaggattatccagtgctccagccctgcctcctcatccgaacaggggtgcacctttgcctgctcatccaaacagtcaggtctctagctttatggaagaattgaacccaatggccggctttccgtttggtcctcggcctgtcagcttaggtggtcatggcatgccatcgccagctcctgatgttgctggtggaagcaaccatcccgaggcattgcaaaggctccttgagatggaaatgagatcaaacccgaaacagattcacccatttgctgccagtggtgggcataatagtcaagggatgtatgggcatgaactggacatgggttttgggtatagatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1086

Amino Acids

119.15

Weight (kDa)

5.87

Isoelectric Point (pI)

58.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011486)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 558, 1191
Acc36I ACCTGC 3 cut(s) 400, 1480, 1618
Acc65I GGTACC 1 cut(s) 1342
AccB1I GGYRCC 2 cut(s) 484, 1342
AccB7I CCANNNNNTGG 2 cut(s) 206, 982
AccI GTMKAC 3 cut(s) 86, 629, 2447
AccII CGCG 1 cut(s) 1569
AccIII TCCGGA 1 cut(s) 1490
AciI CCGC 8 cut(s) 42, 400, 482, 1335, 1340, 2118, 2375, 2909
AclWI GGATC 4 cut(s) 42, 2006, 2758, 2768
AcoI YGGCCR 1 cut(s) 3033
AcsI RAATTY 6 cut(s) 170, 994, 1165, 1935, 2437, 2740
AcuI CTGAAG 2 cut(s) 749, 2412
AcyI GRCGYC 2 cut(s) 2358, 2750
AfaI GTAC 5 cut(s) 1051, 1126, 1344, 1673, 1797
AflIII ACRYGT 1 cut(s) 1712
AgeI ACCGGT 2 cut(s) 153, 1078
AhdI GACNNNNNGTC 1 cut(s) 2344
AjiI CACGTC 1 cut(s) 1973
AjnI CCWGG 4 cut(s) 390, 916, 2014, 2716
AjuI GAANNNNNNNTTGG 4 cut(s) 933, 965, 2028, 2060
Alw21I GWGCWC 3 cut(s) 2086, 2941, 2974
Alw26I GTCTC 3 cut(s) 1910, 2599, 3007
Alw44I GTGCAC 1 cut(s) 2970
AlwI GGATC 4 cut(s) 42, 2006, 2758, 2768
AlwNI CAGNNNCTG 2 cut(s) 727, 3098
Ama87I CYCGRG 1 cut(s) 3125
Aor13HI TCCGGA 1 cut(s) 1490
ApaI GGGCCC 1 cut(s) 1415
ApaLI GTGCAC 1 cut(s) 2970
ApeKI GCWGC 8 cut(s) 272, 697, 1105, 1771, 1816, 1849, 2519, 3191
ApoI RAATTY 6 cut(s) 170, 994, 1165, 1935, 2437, 2740
ArsI GACNNNNNNTTYG 5 cut(s) 1909, 1941, 2159, 2191, 3230
AsiGI ACCGGT 2 cut(s) 153, 1078
Asp700I GAANNNNTTC 2 cut(s) 442, 670
Asp718I GGTACC 1 cut(s) 1342
AsuC2I CCSGG 1 cut(s) 2452
AsuHPI GGTGA 6 cut(s) 243, 278, 1309, 1667, 2858, 3173
AvaI CYCGRG 1 cut(s) 3125
AvaII GGWCC 7 cut(s) 412, 1541, 1760, 2115, 2201, 2573, 3050
BaeGI GKGCMC 3 cut(s) 915, 1415, 2974
BanI GGYRCC 2 cut(s) 484, 1342
BanII GRGCYC 1 cut(s) 1415
BarI GAAGNNNNNNTAC 2 cut(s) 1117, 1149
BauI CACGAG 1 cut(s) 2209
BbsI GAAGAC 3 cut(s) 24, 1467, 1725
Bbv12I GWGCWC 3 cut(s) 2086, 2941, 2974
BbvI GCAGC 8 cut(s) 284, 709, 1117, 1783, 1828, 1861, 2531, 3178
BciT130I CCWGG 4 cut(s) 392, 918, 2016, 2718
BcnI CCSGG 1 cut(s) 2452
BcoDI GTCTC 3 cut(s) 1910, 2599, 3007
BfaI CTAG 7 cut(s) 204, 261, 927, 2288, 2315, 2459, 3006
BfmI CTRYAG 1 cut(s) 1611
BfuAI ACCTGC 3 cut(s) 400, 1480, 1618
BglII AGATCT 1 cut(s) 1482
BlpI GCTNAGC 2 cut(s) 828, 1812
BmcAI AGTACT 1 cut(s) 1126
Bme1390I CCNGG 5 cut(s) 392, 918, 2016, 2452, 2718
Bme18I GGWCC 7 cut(s) 412, 1541, 1760, 2115, 2201, 2573, 3050
BmeRI GACNNNNNGTC 1 cut(s) 2344
BmeT110I CYCGRG 1 cut(s) 3125
BmgBI CACGTC 1 cut(s) 1973
BmrFI CCNGG 5 cut(s) 392, 918, 2016, 2452, 2718
BmrI ACTGGG 1 cut(s) 1418
BmsI GCATC 9 cut(s) 169, 259, 857, 905, 1276, 1853, 1931, 2845, 2874
BmuI ACTGGG 1 cut(s) 1418
BoxI GACNNNNGTC 1 cut(s) 1758
BpiI GAAGAC 3 cut(s) 24, 1467, 1725
BpmI CTGGAG 4 cut(s) 492, 1632, 2156, 2925
Bpu10I CCTNAGC 2 cut(s) 417, 3067
Bpu1102I GCTNAGC 2 cut(s) 828, 1812
BpuEI CTTGAG 4 cut(s) 1025, 1164, 1745, 3167
BpuMI CCSGG 1 cut(s) 2452
Bsa29I ATCGAT 2 cut(s) 1284, 2274
BsaBI GATNNNNATC 2 cut(s) 2712, 2859
BsaHI GRCGYC 2 cut(s) 2358, 2750
BsaI GGTCTC 1 cut(s) 3007
BsaJI CCNNGG 8 cut(s) 404, 809, 833, 916, 2015, 2587, 3053, 3126
BsaWI WCCGGW 4 cut(s) 31, 153, 1078, 1490
BsaXI ACNNNNNCTCC 6 cut(s) 2073, 2103, 2568, 2598, 2643, 2673
Bse118I RCCGGY 3 cut(s) 153, 1078, 3035
Bse1I ACTGG 9 cut(s) 1323, 1413, 1649, 2087, 2159, 2842, 2934, 3195, 3240
Bse3DI GCAATG 3 cut(s) 535, 2728, 3131
Bse8I GATNNNNATC 2 cut(s) 2712, 2859
BseAI TCCGGA 1 cut(s) 1490
BseBI CCWGG 4 cut(s) 392, 918, 2016, 2718
BseCI ATCGAT 2 cut(s) 1284, 2274
BseDI CCNNGG 8 cut(s) 404, 809, 833, 916, 2015, 2587, 3053, 3126
BseJI GATNNNNATC 2 cut(s) 2712, 2859
BseMI GCAATG 3 cut(s) 535, 2728, 3131
BseMII CTCAG 7 cut(s) 408, 615, 819, 1457, 1653, 1803, 2747
BseNI ACTGG 9 cut(s) 1323, 1413, 1649, 2087, 2159, 2842, 2934, 3195, 3240
BseRI GAGGAG 5 cut(s) 826, 1635, 2470, 2769, 2943
BseSI GKGCMC 3 cut(s) 915, 1415, 2974
BseXI GCAGC 8 cut(s) 284, 709, 1117, 1783, 1828, 1861, 2531, 3178
BseYI CCCAGC 1 cut(s) 461
BsgI GTGCAG 1 cut(s) 1953
Bsh1236I CGCG 1 cut(s) 1569
Bsh1285I CGRYCG 1 cut(s) 154
BshNI GGYRCC 2 cut(s) 484, 1342
BshTI ACCGGT 2 cut(s) 153, 1078
BshVI ATCGAT 2 cut(s) 1284, 2274
BsiEI CGRYCG 1 cut(s) 154
BsiHKAI GWGCWC 3 cut(s) 2086, 2941, 2974
BsiHKCI CYCGRG 1 cut(s) 3125
BsiSI CCGG 6 cut(s) 32, 154, 1079, 1491, 2451, 3036
BslFI GGGAC 2 cut(s) 398, 1966
BsmAI GTCTC 3 cut(s) 1910, 2599, 3007
BsmFI GGGAC 2 cut(s) 398, 1966
Bso31I GGTCTC 1 cut(s) 3007
BsoBI CYCGRG 1 cut(s) 3125
Bsp120I GGGCCC 1 cut(s) 1411
Bsp1286I GDGCHC 5 cut(s) 915, 1415, 2086, 2941, 2974
Bsp13I TCCGGA 1 cut(s) 1490
Bsp1407I TGTACA 1 cut(s) 1671
Bsp1720I GCTNAGC 2 cut(s) 828, 1812
BspACI CCGC 8 cut(s) 42, 400, 482, 1335, 1340, 2118, 2375, 2909
BspCNI CTCAG 7 cut(s) 409, 616, 820, 1456, 1654, 1804, 2746
BspDI ATCGAT 2 cut(s) 1284, 2274
BspEI TCCGGA 1 cut(s) 1490
BspFNI CGCG 1 cut(s) 1569
BspHI TCATGA 4 cut(s) 55, 1384, 1453, 2058
BspMAI CTGCAG 1 cut(s) 1615
BspMI ACCTGC 3 cut(s) 400, 1480, 1618
BspPI GGATC 4 cut(s) 42, 2006, 2758, 2768
BspT107I GGYRCC 2 cut(s) 484, 1342
BspTNI GGTCTC 1 cut(s) 3007
BsrDI GCAATG 3 cut(s) 535, 2728, 3131
BsrFI RCCGGY 3 cut(s) 153, 1078, 3035
BsrGI TGTACA 1 cut(s) 1671
BsrI ACTGG 9 cut(s) 1323, 1413, 1649, 2087, 2159, 2842, 2934, 3195, 3240
BssAI RCCGGY 3 cut(s) 153, 1078, 3035
BssECI CCNNGG 8 cut(s) 404, 809, 833, 916, 2015, 2587, 3053, 3126
BssNAI GTATAC 2 cut(s) 87, 630
BssNI GRCGYC 2 cut(s) 2358, 2750
BssSI CACGAG 1 cut(s) 2209
BssT1I CCWWGG 1 cut(s) 404
Bst1107I GTATAC 2 cut(s) 87, 630
Bst2BI CACGAG 1 cut(s) 2209
Bst2UI CCWGG 4 cut(s) 392, 918, 2016, 2718
Bst4CI ACNGT 9 cut(s) 934, 1037, 1577, 1757, 1866, 1957, 2228, 2413, 2996
Bst6I CTCTTC 5 cut(s) 645, 661, 1435, 2015, 2388
BstACI GRCGYC 2 cut(s) 2358, 2750
BstAPI GCANNNNNTGC 1 cut(s) 2884
BstAUI TGTACA 1 cut(s) 1671
BstC8I GCNNGC 7 cut(s) 42, 1103, 2373, 2982, 3037, 3083, 3093
BstDSI CCRYGG 1 cut(s) 2587
BstEII GGTNACC 2 cut(s) 1297, 2148
BstENI CCTNNNNNAGG 1 cut(s) 261
BstFNI CGCG 1 cut(s) 1569
BstMAI GTCTC 3 cut(s) 1910, 2599, 3007
BstMCI CGRYCG 1 cut(s) 154
BstMWI GCNNNNNNNGC 7 cut(s) 406, 467, 1253, 1700, 2003, 2884, 2917
BstNI CCWGG 4 cut(s) 392, 918, 2016, 2718
BstNSI RCATGY 2 cut(s) 1716, 3085
BstPAI GACNNNNGTC 1 cut(s) 1758
BstPI GGTNACC 2 cut(s) 1297, 2148
BstSCI CCNGG 5 cut(s) 390, 916, 2014, 2450, 2716
BstSFI CTRYAG 1 cut(s) 1611
BstSLI GKGCMC 3 cut(s) 915, 1415, 2974
BstUI CGCG 1 cut(s) 1569
BstV1I GCAGC 8 cut(s) 284, 709, 1117, 1783, 1828, 1861, 2531, 3178
BstV2I GAAGAC 3 cut(s) 24, 1467, 1725
BstX2I RGATCY 1 cut(s) 1482
BstYI RGATCY 1 cut(s) 1482
BstZ17I GTATAC 2 cut(s) 87, 630
Bsu15I ATCGAT 2 cut(s) 1284, 2274
BsuTUI ATCGAT 2 cut(s) 1284, 2274
BtgI CCRYGG 1 cut(s) 2587
BtgZI GCGATG 2 cut(s) 1830, 3072
BtrI CACGTC 1 cut(s) 1973
BtsI GCAGTG 3 cut(s) 334, 823, 1965
BveI ACCTGC 3 cut(s) 400, 1480, 1618
Cac8I GCNNGC 7 cut(s) 42, 1103, 2373, 2982, 3037, 3083, 3093
CaiI CAGNNNCTG 2 cut(s) 727, 3098
CciI TCATGA 4 cut(s) 55, 1384, 1453, 2058
Cfr10I RCCGGY 3 cut(s) 153, 1078, 3035
ClaI ATCGAT 2 cut(s) 1284, 2274
CseI GACGC 3 cut(s) 333, 2347, 2758
Csp6I GTAC 5 cut(s) 1050, 1125, 1343, 1672, 1796
CspAI ACCGGT 2 cut(s) 153, 1078
CviQI GTAC 5 cut(s) 1050, 1125, 1343, 1672, 1796
DraI TTTAAA 2 cut(s) 1350, 2427
DriI GACNNNNNGTC 1 cut(s) 2344
EaeI YGGCCR 1 cut(s) 3033
Eam1104I CTCTTC 5 cut(s) 645, 661, 1435, 2015, 2388
Eam1105I GACNNNNNGTC 1 cut(s) 2344
EarI CTCTTC 5 cut(s) 645, 661, 1435, 2015, 2388
EciI GGCGGA 1 cut(s) 2898
Eco130I CCWWGG 1 cut(s) 404
Eco147I AGGCCT 1 cut(s) 2106
Eco24I GRGCYC 1 cut(s) 1415
Eco31I GGTCTC 1 cut(s) 3007
Eco47I GGWCC 7 cut(s) 412, 1541, 1760, 2115, 2201, 2573, 3050
Eco57I CTGAAG 2 cut(s) 749, 2412
Eco88I CYCGRG 1 cut(s) 3125
Eco91I GGTNACC 2 cut(s) 1297, 2148
EcoNI CCTNNNNNAGG 1 cut(s) 261
EcoO109I RGGNCCY 2 cut(s) 412, 1412
EcoO65I GGTNACC 2 cut(s) 1297, 2148
EcoRI GAATTC 2 cut(s) 170, 994
EcoRII CCWGG 4 cut(s) 390, 916, 2014, 2716
EcoT14I CCWWGG 1 cut(s) 404
EcoT22I ATGCAT 2 cut(s) 1846, 2889
EcoT38I GRGCYC 1 cut(s) 1415
ErhI CCWWGG 1 cut(s) 404
FalI AAGNNNNNCTT 2 cut(s) 301, 333
FaqI GGGAC 2 cut(s) 398, 1966
FauI CCCGC 1 cut(s) 49
FauNDI CATATG 2 cut(s) 1668, 2889
FblI GTMKAC 3 cut(s) 86, 629, 2447
FriOI GRGCYC 1 cut(s) 1415
FspBI CTAG 7 cut(s) 204, 261, 927, 2288, 2315, 2459, 3006
GsaI CCCAGC 1 cut(s) 465
GsuI CTGGAG 4 cut(s) 492, 1632, 2156, 2925
HapII CCGG 6 cut(s) 32, 154, 1079, 1491, 2451, 3036
HgaI GACGC 3 cut(s) 333, 2347, 2758
Hin1I GRCGYC 2 cut(s) 2358, 2750
HincII GTYRAC 2 cut(s) 1426, 2500
HindII GTYRAC 2 cut(s) 1426, 2500
HindIII AAGCTT 3 cut(s) 1245, 1254, 1325
HpaII CCGG 6 cut(s) 32, 154, 1079, 1491, 2451, 3036
HphI GGTGA 6 cut(s) 243, 278, 1309, 1667, 2858, 3173
Hpy166II GTNNAC 9 cut(s) 87, 630, 1426, 2420, 2448, 2500, 2576, 2816, 2972
Hpy8I GTNNAC 9 cut(s) 87, 630, 1426, 2420, 2448, 2500, 2576, 2816, 2972
HpyCH4III ACNGT 9 cut(s) 934, 1037, 1577, 1757, 1866, 1957, 2228, 2413, 2996
HpyCH4IV ACGT 1 cut(s) 1972
HpyF10VI GCNNNNNNNGC 7 cut(s) 406, 467, 1253, 1700, 2003, 2884, 2917
HpySE526I ACGT 1 cut(s) 1972
Hsp92I GRCGYC 2 cut(s) 2358, 2750
Kpn2I TCCGGA 1 cut(s) 1490
KpnI GGTACC 1 cut(s) 1346
KroI GCCGGC 1 cut(s) 3035
KroNI GCCGGC 1 cut(s) 3037
LmnI GCTCC 8 cut(s) 813, 2081, 2137, 2664, 2814, 2944, 3100, 3147
Lsp1109I GCAGC 8 cut(s) 284, 709, 1117, 1783, 1828, 1861, 2531, 3178
LweI GCATC 9 cut(s) 169, 259, 857, 905, 1276, 1853, 1931, 2845, 2874
MaeI CTAG 7 cut(s) 204, 261, 927, 2288, 2315, 2459, 3006
MaeII ACGT 1 cut(s) 1972
MfeI CAATTG 1 cut(s) 2190
MflI RGATCY 1 cut(s) 1482
MhlI GDGCHC 5 cut(s) 915, 1415, 2086, 2941, 2974
MlyI GAGTC 5 cut(s) 356, 587, 1168, 1652, 2032
MmeI TCCRAC 4 cut(s) 753, 1787, 2059, 2179
Mph1103I ATGCAT 2 cut(s) 1846, 2889
MroI TCCGGA 1 cut(s) 1490
MroNI GCCGGC 1 cut(s) 3035
MroXI GAANNNNTTC 2 cut(s) 442, 670
MseI TTAA 7 cut(s) 63, 600, 1349, 1683, 1886, 2405, 2426
MslI CAYNNNNRTG 1 cut(s) 1116
MspA1I CMGCKG 3 cut(s) 275, 461, 1335
MspI CCGG 6 cut(s) 32, 154, 1079, 1491, 2451, 3036
MspR9I CCNGG 5 cut(s) 392, 918, 2016, 2452, 2718
MunI CAATTG 1 cut(s) 2190
MvaI CCWGG 4 cut(s) 392, 918, 2016, 2718
MvnI CGCG 1 cut(s) 1569
MwoI GCNNNNNNNGC 7 cut(s) 406, 467, 1253, 1700, 2003, 2884, 2917
NaeI GCCGGC 1 cut(s) 3037
NciI CCSGG 1 cut(s) 2452
NdeI CATATG 2 cut(s) 1668, 2889
NgoMIV GCCGGC 1 cut(s) 3035
NmeAIII GCCGAG 4 cut(s) 376, 814, 834, 3034
NmuCI GTSAC 6 cut(s) 341, 1297, 1655, 1751, 1973, 2228
NsiI ATGCAT 2 cut(s) 1846, 2889
NspI RCATGY 2 cut(s) 1716, 3085
PaeI GCATGC 1 cut(s) 3085
PagI TCATGA 4 cut(s) 55, 1384, 1453, 2058
PceI AGGCCT 1 cut(s) 2106
PciI ACATGT 1 cut(s) 1712
PdiI GCCGGC 1 cut(s) 3037
PdmI GAANNNNTTC 2 cut(s) 442, 670
PflMI CCANNNNNTGG 2 cut(s) 206, 982
PinAI ACCGGT 2 cut(s) 153, 1078
PleI GAGTC 5 cut(s) 356, 587, 1167, 1652, 2031
PpsI GAGTC 5 cut(s) 356, 587, 1167, 1652, 2031
PpuMI RGGWCCY 1 cut(s) 412
PscI ACATGT 1 cut(s) 1712
PshAI GACNNNNGTC 1 cut(s) 1758
PsiI TTATAA 2 cut(s) 558, 1191
Psp5II RGGWCCY 1 cut(s) 412
Psp6I CCWGG 4 cut(s) 390, 916, 2014, 2716
PspEI GGTNACC 2 cut(s) 1297, 2148
PspFI CCCAGC 1 cut(s) 461
PspGI CCWGG 4 cut(s) 390, 916, 2014, 2716
PspOMI GGGCCC 1 cut(s) 1411
PspPPI RGGWCCY 1 cut(s) 412
PstI CTGCAG 1 cut(s) 1615
PstNI CAGNNNCTG 2 cut(s) 727, 3098
PsuI RGATCY 1 cut(s) 1482
PvuII CAGCTG 2 cut(s) 275, 461
RsaI GTAC 5 cut(s) 1051, 1126, 1344, 1673, 1797
RsaNI GTAC 5 cut(s) 1050, 1125, 1343, 1672, 1796
RseI CAYNNNNRTG 1 cut(s) 1116
SaqAI TTAA 7 cut(s) 63, 600, 1349, 1683, 1886, 2405, 2426
ScaI AGTACT 1 cut(s) 1126
SchI GAGTC 5 cut(s) 356, 587, 1168, 1652, 2032
ScrFI CCNGG 5 cut(s) 392, 918, 2016, 2452, 2718
SduI GDGCHC 5 cut(s) 915, 1415, 2086, 2941, 2974
SfaNI GCATC 9 cut(s) 169, 259, 857, 905, 1276, 1853, 1931, 2845, 2874
SfcI CTRYAG 1 cut(s) 1611
SinI GGWCC 7 cut(s) 412, 1541, 1760, 2115, 2201, 2573, 3050
SmiMI CAYNNNNRTG 1 cut(s) 1116
SmlI CTYRAG 4 cut(s) 1004, 1179, 1724, 3146
SmoI CTYRAG 4 cut(s) 1004, 1179, 1724, 3146
SphI GCATGC 1 cut(s) 3085
SseBI AGGCCT 1 cut(s) 2106
SsiI CCGC 8 cut(s) 42, 400, 482, 1335, 1340, 2118, 2375, 2909
SspMI CTAG 7 cut(s) 204, 261, 927, 2288, 2315, 2459, 3006
StuI AGGCCT 1 cut(s) 2106
StyD4I CCNGG 5 cut(s) 390, 916, 2014, 2450, 2716
StyI CCWWGG 1 cut(s) 404
TaaI ACNGT 9 cut(s) 934, 1037, 1577, 1757, 1866, 1957, 2228, 2413, 2996
TaiI ACGT 1 cut(s) 1975
TaqI TCGA 8 cut(s) 150, 174, 496, 1063, 1284, 1733, 2274, 2383
TatI WGTACW 2 cut(s) 1124, 1671
TauI GCSGC 2 cut(s) 403, 485
Tru1I TTAA 7 cut(s) 63, 600, 1349, 1683, 1886, 2405, 2426
Tru9I TTAA 7 cut(s) 63, 600, 1349, 1683, 1886, 2405, 2426
TseFI GTSAC 6 cut(s) 341, 1297, 1655, 1751, 1973, 2228
TseI GCWGC 8 cut(s) 272, 697, 1105, 1771, 1816, 1849, 2519, 3191
Tsp45I GTSAC 6 cut(s) 341, 1297, 1655, 1751, 1973, 2228
TspGWI ACGGA 3 cut(s) 2576, 2801, 3033
Van91I CCANNNNNTGG 2 cut(s) 206, 982
VneI GTGCAC 1 cut(s) 2970
VpaK11BI GGWCC 7 cut(s) 412, 1541, 1760, 2115, 2201, 2573, 3050
XagI CCTNNNNNAGG 1 cut(s) 261
XapI RAATTY 6 cut(s) 170, 994, 1165, 1935, 2437, 2740
XceI RCATGY 2 cut(s) 1716, 3085
XmiI GTMKAC 3 cut(s) 86, 629, 2447
XmnI GAANNNNTTC 2 cut(s) 442, 670
XspI CTAG 7 cut(s) 204, 261, 927, 2288, 2315, 2459, 3006
ZrmI AGTACT 1 cut(s) 1126
Zsp2I ATGCAT 2 cut(s) 1846, 2889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.