isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G01290 AT4G01290 |
| fragaria_vesca | FvH4_7g15120 |
| malus_domestica | MD01G1069900.v1.1 MD07G1132600.v1.1 |
| prunus_persica | Prupe.2G176000_v2.0.a1 |
| pyrus_communis | pycom01g09910 pycom07g12940 |
| rosa_chinensis | RchiOBHm_Chr1g0357311 |
| rosa_laevigata | RLG00000028028 |
| rosa_multiflora | Rmu_sc0000316.1_g000002 Rmu_sc0011531.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00298860 |
| rosa_rugosa | Rorug01G0256200 |
| rosa_samantha | Rh1AG269600 Rh1BG237500 Rh1CG253800 Rh1DG265400 |
| rosa_wichuraiana | Rw1G023880 Rw1G023980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 558, 1191 |
| Acc36I | ACCTGC | 4 cut(s) | 400, 1489, 1627, 2389 |
| AccB1I | GGYRCC | 1 cut(s) | 484 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 206, 982 |
| AccI | GTMKAC | 3 cut(s) | 86, 629, 2456 |
| AccII | CGCG | 2 cut(s) | 286, 1578 |
| AccIII | TCCGGA | 2 cut(s) | 371, 2143 |
| AciI | CCGC | 6 cut(s) | 42, 400, 1335, 2127, 2384, 2918 |
| AclWI | GGATC | 4 cut(s) | 42, 2015, 2767, 2777 |
| AcoI | YGGCCR | 2 cut(s) | 3042, 3065 |
| AcsI | RAATTY | 5 cut(s) | 170, 994, 1165, 2446, 2749 |
| AcuI | CTGAAG | 2 cut(s) | 749, 2421 |
| AcyI | GRCGYC | 2 cut(s) | 2367, 2759 |
| AfaI | GTAC | 5 cut(s) | 1051, 1126, 1344, 1682, 1806 |
| AflIII | ACRYGT | 1 cut(s) | 1721 |
| AgeI | ACCGGT | 2 cut(s) | 153, 1078 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2353 |
| AjiI | CACGTC | 1 cut(s) | 1982 |
| AjnI | CCWGG | 4 cut(s) | 390, 916, 2023, 2725 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 933, 965, 2037, 2069 |
| Alw21I | GWGCWC | 3 cut(s) | 2095, 2950, 2983 |
| Alw26I | GTCTC | 3 cut(s) | 1919, 2608, 3016 |
| Alw44I | GTGCAC | 1 cut(s) | 2979 |
| AlwI | GGATC | 4 cut(s) | 42, 2015, 2767, 2777 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 727, 3107 |
| Aor13HI | TCCGGA | 2 cut(s) | 371, 2143 |
| AoxI | GGCC | 8 cut(s) | 197, 401, 1420, 1505, 2113, 2599, 3042, 3065 |
| ApaI | GGGCCC | 1 cut(s) | 1424 |
| ApaLI | GTGCAC | 1 cut(s) | 2979 |
| ApeKI | GCWGC | 8 cut(s) | 272, 697, 1105, 1780, 1825, 1858, 2528, 3200 |
| ApoI | RAATTY | 5 cut(s) | 170, 994, 1165, 2446, 2749 |
| ArsI | GACNNNNNNTTYG | 3 cut(s) | 2168, 2200, 3239 |
| AsiGI | ACCGGT | 2 cut(s) | 153, 1078 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 442 |
| AsuC2I | CCSGG | 1 cut(s) | 2461 |
| AsuHPI | GGTGA | 5 cut(s) | 243, 278, 1309, 2867, 3182 |
| AvaII | GGWCC | 8 cut(s) | 412, 1550, 1769, 2124, 2210, 2378, 2582, 3059 |
| AxyI | CCTNAGG | 1 cut(s) | 3135 |
| BaeGI | GKGCMC | 4 cut(s) | 487, 915, 1424, 2983 |
| BanI | GGYRCC | 1 cut(s) | 484 |
| BanII | GRGCYC | 1 cut(s) | 1424 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1117, 1149 |
| BbsI | GAAGAC | 3 cut(s) | 24, 1476, 1734 |
| Bbv12I | GWGCWC | 3 cut(s) | 2095, 2950, 2983 |
| BbvI | GCAGC | 8 cut(s) | 284, 709, 1117, 1792, 1837, 1870, 2540, 3187 |
| BciT130I | CCWGG | 4 cut(s) | 392, 918, 2025, 2727 |
| BcnI | CCSGG | 1 cut(s) | 2461 |
| BcoDI | GTCTC | 3 cut(s) | 1919, 2608, 3016 |
| BfaI | CTAG | 6 cut(s) | 204, 261, 927, 2297, 2468, 3015 |
| BfmI | CTRYAG | 1 cut(s) | 1620 |
| BfuAI | ACCTGC | 4 cut(s) | 400, 1489, 1627, 2389 |
| BglII | AGATCT | 1 cut(s) | 1491 |
| BisI | GCNGC | 9 cut(s) | 273, 401, 698, 1106, 1781, 1826, 1859, 2529, 3201 |
| BlpI | GCTNAGC | 2 cut(s) | 828, 1821 |
| BlsI | GCNGC | 9 cut(s) | 274, 402, 699, 1107, 1782, 1827, 1860, 2530, 3202 |
| BmcAI | AGTACT | 1 cut(s) | 1126 |
| Bme1390I | CCNGG | 5 cut(s) | 392, 918, 2025, 2461, 2727 |
| Bme18I | GGWCC | 8 cut(s) | 412, 1550, 1769, 2124, 2210, 2378, 2582, 3059 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2353 |
| BmgBI | CACGTC | 1 cut(s) | 1982 |
| BmrFI | CCNGG | 5 cut(s) | 392, 918, 2025, 2461, 2727 |
| BmrI | ACTGGG | 1 cut(s) | 1427 |
| BmuI | ACTGGG | 1 cut(s) | 1427 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1767 |
| BpiI | GAAGAC | 3 cut(s) | 24, 1476, 1734 |
| BpmI | CTGGAG | 3 cut(s) | 492, 1641, 2934 |
| Bpu10I | CCTNAGC | 2 cut(s) | 417, 3076 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 828, 1821 |
| BpuEI | CTTGAG | 4 cut(s) | 1025, 1164, 1754, 3176 |
| BpuMI | CCSGG | 1 cut(s) | 2461 |
| Bsa29I | ATCGAT | 2 cut(s) | 1284, 2283 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2721, 2868 |
| BsaHI | GRCGYC | 2 cut(s) | 2367, 2759 |
| BsaI | GGTCTC | 1 cut(s) | 3016 |
| BsaJI | CCNNGG | 6 cut(s) | 404, 809, 833, 916, 2024, 3062 |
| BsaWI | WCCGGW | 5 cut(s) | 153, 371, 1078, 1499, 2143 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2082, 2112, 2652, 2682 |
| Bse118I | RCCGGY | 3 cut(s) | 153, 1078, 3044 |
| Bse21I | CCTNAGG | 1 cut(s) | 3135 |
| Bse3DI | GCAATG | 3 cut(s) | 535, 2737, 3140 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2721, 2868 |
| BseAI | TCCGGA | 2 cut(s) | 371, 2143 |
| BseBI | CCWGG | 4 cut(s) | 392, 918, 2025, 2727 |
| BseCI | ATCGAT | 2 cut(s) | 1284, 2283 |
| BseDI | CCNNGG | 6 cut(s) | 404, 809, 833, 916, 2024, 3062 |
| BseJI | GATNNNNATC | 2 cut(s) | 2721, 2868 |
| BseMI | GCAATG | 3 cut(s) | 535, 2737, 3140 |
| BseMII | CTCAG | 9 cut(s) | 408, 615, 819, 1466, 1662, 1812, 1929, 2756, 3126 |
| BseRI | GAGGAG | 7 cut(s) | 806, 826, 1354, 1644, 2479, 2778, 2952 |
| BseSI | GKGCMC | 4 cut(s) | 487, 915, 1424, 2983 |
| BseXI | GCAGC | 8 cut(s) | 284, 709, 1117, 1792, 1837, 1870, 2540, 3187 |
| BseYI | CCCAGC | 1 cut(s) | 461 |
| BsgI | GTGCAG | 2 cut(s) | 1359, 1962 |
| Bsh1236I | CGCG | 2 cut(s) | 286, 1578 |
| Bsh1285I | CGRYCG | 1 cut(s) | 154 |
| BshFI | GGCC | 8 cut(s) | 199, 403, 1422, 1507, 2115, 2601, 3044, 3067 |
| BshNI | GGYRCC | 1 cut(s) | 484 |
| BshTI | ACCGGT | 2 cut(s) | 153, 1078 |
| BshVI | ATCGAT | 2 cut(s) | 1284, 2283 |
| BsiEI | CGRYCG | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2095, 2950, 2983 |
| BsiSI | CCGG | 8 cut(s) | 32, 154, 372, 1079, 1500, 2144, 2460, 3045 |
| BslFI | GGGAC | 2 cut(s) | 398, 1679 |
| BsmAI | GTCTC | 3 cut(s) | 1919, 2608, 3016 |
| BsmFI | GGGAC | 2 cut(s) | 398, 1679 |
| BsnI | GGCC | 8 cut(s) | 199, 403, 1422, 1507, 2115, 2601, 3044, 3067 |
| Bso31I | GGTCTC | 1 cut(s) | 3016 |
| Bsp120I | GGGCCC | 1 cut(s) | 1420 |
| Bsp1286I | GDGCHC | 6 cut(s) | 487, 915, 1424, 2095, 2950, 2983 |
| Bsp13I | TCCGGA | 2 cut(s) | 371, 2143 |
| Bsp1407I | TGTACA | 1 cut(s) | 1680 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 828, 1821 |
| Bsp68I | TCGCGA | 1 cut(s) | 286 |
| BspACI | CCGC | 6 cut(s) | 42, 400, 1335, 2127, 2384, 2918 |
| BspANI | GGCC | 8 cut(s) | 199, 403, 1422, 1507, 2115, 2601, 3044, 3067 |
| BspCNI | CTCAG | 9 cut(s) | 409, 616, 820, 1465, 1663, 1813, 1930, 2755, 3127 |
| BspDI | ATCGAT | 2 cut(s) | 1284, 2283 |
| BspEI | TCCGGA | 2 cut(s) | 371, 2143 |
| BspFNI | CGCG | 2 cut(s) | 286, 1578 |
| BspHI | TCATGA | 4 cut(s) | 55, 1393, 1462, 2067 |
| BspMAI | CTGCAG | 1 cut(s) | 1624 |
| BspMI | ACCTGC | 4 cut(s) | 400, 1489, 1627, 2389 |
| BspPI | GGATC | 4 cut(s) | 42, 2015, 2767, 2777 |
| BspT107I | GGYRCC | 1 cut(s) | 484 |
| BspTNI | GGTCTC | 1 cut(s) | 3016 |
| BsrDI | GCAATG | 3 cut(s) | 535, 2737, 3140 |
| BsrFI | RCCGGY | 3 cut(s) | 153, 1078, 3044 |
| BsrGI | TGTACA | 1 cut(s) | 1680 |
| BssAI | RCCGGY | 3 cut(s) | 153, 1078, 3044 |
| BssECI | CCNNGG | 6 cut(s) | 404, 809, 833, 916, 2024, 3062 |
| BssNAI | GTATAC | 2 cut(s) | 87, 630 |
| BssNI | GRCGYC | 2 cut(s) | 2367, 2759 |
| BssT1I | CCWWGG | 1 cut(s) | 404 |
| Bst1107I | GTATAC | 2 cut(s) | 87, 630 |
| Bst2UI | CCWGG | 4 cut(s) | 392, 918, 2025, 2727 |
| Bst4CI | ACNGT | 7 cut(s) | 934, 1037, 1586, 1766, 1875, 2237, 3005 |
| Bst6I | CTCTTC | 4 cut(s) | 645, 661, 2024, 2397 |
| BstACI | GRCGYC | 2 cut(s) | 2367, 2759 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2893 |
| BstAUI | TGTACA | 1 cut(s) | 1680 |
| BstC8I | GCNNGC | 6 cut(s) | 42, 1103, 2991, 3046, 3092, 3102 |
| BstEII | GGTNACC | 2 cut(s) | 1297, 2157 |
| BstFNI | CGCG | 2 cut(s) | 286, 1578 |
| BstMAI | GTCTC | 3 cut(s) | 1919, 2608, 3016 |
| BstMCI | CGRYCG | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 37, 406, 467, 1253, 1709, 2012, 2893, 2926 |
| BstNI | CCWGG | 4 cut(s) | 392, 918, 2025, 2727 |
| BstNSI | RCATGY | 2 cut(s) | 1725, 3094 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1767 |
| BstPI | GGTNACC | 2 cut(s) | 1297, 2157 |
| BstSCI | CCNGG | 5 cut(s) | 390, 916, 2023, 2459, 2725 |
| BstSFI | CTRYAG | 1 cut(s) | 1620 |
| BstSLI | GKGCMC | 4 cut(s) | 487, 915, 1424, 2983 |
| BstUI | CGCG | 2 cut(s) | 286, 1578 |
| BstV1I | GCAGC | 8 cut(s) | 284, 709, 1117, 1792, 1837, 1870, 2540, 3187 |
| BstV2I | GAAGAC | 3 cut(s) | 24, 1476, 1734 |
| BstX2I | RGATCY | 1 cut(s) | 1491 |
| BstYI | RGATCY | 1 cut(s) | 1491 |
| BstZ17I | GTATAC | 2 cut(s) | 87, 630 |
| Bsu15I | ATCGAT | 2 cut(s) | 1284, 2283 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3135 |
| BsuRI | GGCC | 8 cut(s) | 199, 403, 1422, 1507, 2115, 2601, 3044, 3067 |
| BsuTUI | ATCGAT | 2 cut(s) | 1284, 2283 |
| BtgZI | GCGATG | 2 cut(s) | 1839, 3081 |
| BtrI | CACGTC | 1 cut(s) | 1982 |
| BtsI | GCAGTG | 3 cut(s) | 334, 823, 1974 |
| BtuMI | TCGCGA | 1 cut(s) | 286 |
| BveI | ACCTGC | 4 cut(s) | 400, 1489, 1627, 2389 |
| Cac8I | GCNNGC | 6 cut(s) | 42, 1103, 2991, 3046, 3092, 3102 |
| CaiI | CAGNNNCTG | 2 cut(s) | 727, 3107 |
| CciI | TCATGA | 4 cut(s) | 55, 1393, 1462, 2067 |
| Cfr10I | RCCGGY | 3 cut(s) | 153, 1078, 3044 |
| ClaI | ATCGAT | 2 cut(s) | 1284, 2283 |
| CseI | GACGC | 4 cut(s) | 333, 2047, 2356, 2767 |
| Csp6I | GTAC | 5 cut(s) | 1050, 1125, 1343, 1681, 1805 |
| CspAI | ACCGGT | 2 cut(s) | 153, 1078 |
| CviQI | GTAC | 5 cut(s) | 1050, 1125, 1343, 1681, 1805 |
| DraI | TTTAAA | 2 cut(s) | 1350, 2436 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2353 |
| EaeI | YGGCCR | 2 cut(s) | 3042, 3065 |
| Eam1104I | CTCTTC | 4 cut(s) | 645, 661, 2024, 2397 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2353 |
| EarI | CTCTTC | 4 cut(s) | 645, 661, 2024, 2397 |
| EciI | GGCGGA | 1 cut(s) | 2907 |
| Eco130I | CCWWGG | 1 cut(s) | 404 |
| Eco147I | AGGCCT | 1 cut(s) | 2115 |
| Eco24I | GRGCYC | 1 cut(s) | 1424 |
| Eco31I | GGTCTC | 1 cut(s) | 3016 |
| Eco47I | GGWCC | 8 cut(s) | 412, 1550, 1769, 2124, 2210, 2378, 2582, 3059 |
| Eco57I | CTGAAG | 2 cut(s) | 749, 2421 |
| Eco81I | CCTNAGG | 1 cut(s) | 3135 |
| Eco91I | GGTNACC | 2 cut(s) | 1297, 2157 |
| EcoO109I | RGGNCCY | 2 cut(s) | 412, 1421 |
| EcoO65I | GGTNACC | 2 cut(s) | 1297, 2157 |
| EcoRI | GAATTC | 2 cut(s) | 170, 994 |
| EcoRII | CCWGG | 4 cut(s) | 390, 916, 2023, 2725 |
| EcoT14I | CCWWGG | 1 cut(s) | 404 |
| EcoT22I | ATGCAT | 2 cut(s) | 1855, 2898 |
| EcoT38I | GRGCYC | 1 cut(s) | 1424 |
| ErhI | CCWWGG | 1 cut(s) | 404 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 301, 333 |
| FaqI | GGGAC | 2 cut(s) | 398, 1679 |
| FauI | CCCGC | 1 cut(s) | 49 |
| FauNDI | CATATG | 2 cut(s) | 1677, 2898 |
| FblI | GTMKAC | 3 cut(s) | 86, 629, 2456 |
| Fnu4HI | GCNGC | 9 cut(s) | 273, 401, 698, 1106, 1781, 1826, 1859, 2529, 3201 |
| FriOI | GRGCYC | 1 cut(s) | 1424 |
| Fsp4HI | GCNGC | 9 cut(s) | 273, 401, 698, 1106, 1781, 1826, 1859, 2529, 3201 |
| FspBI | CTAG | 6 cut(s) | 204, 261, 927, 2297, 2468, 3015 |
| GluI | GCNGC | 9 cut(s) | 273, 401, 698, 1106, 1781, 1826, 1859, 2529, 3201 |
| GsaI | CCCAGC | 1 cut(s) | 465 |
| GsuI | CTGGAG | 3 cut(s) | 492, 1641, 2934 |
| HaeIII | GGCC | 8 cut(s) | 199, 403, 1422, 1507, 2115, 2601, 3044, 3067 |
| HapII | CCGG | 8 cut(s) | 32, 154, 372, 1079, 1500, 2144, 2460, 3045 |
| HgaI | GACGC | 4 cut(s) | 333, 2047, 2356, 2767 |
| Hin1I | GRCGYC | 2 cut(s) | 2367, 2759 |
| HincII | GTYRAC | 2 cut(s) | 1435, 2509 |
| HindII | GTYRAC | 2 cut(s) | 1435, 2509 |
| HindIII | AAGCTT | 3 cut(s) | 1245, 1254, 1325 |
| HpaII | CCGG | 8 cut(s) | 32, 154, 372, 1079, 1500, 2144, 2460, 3045 |
| HphI | GGTGA | 5 cut(s) | 243, 278, 1309, 2867, 3182 |
| Hpy166II | GTNNAC | 9 cut(s) | 87, 630, 1435, 2429, 2457, 2509, 2585, 2825, 2981 |
| Hpy8I | GTNNAC | 9 cut(s) | 87, 630, 1435, 2429, 2457, 2509, 2585, 2825, 2981 |
| HpyAV | CCTTC | 8 cut(s) | 294, 369, 1876, 2065, 2202, 2250, 2554, 2664 |
| HpyCH4III | ACNGT | 7 cut(s) | 934, 1037, 1586, 1766, 1875, 2237, 3005 |
| HpyCH4IV | ACGT | 1 cut(s) | 1981 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 37, 406, 467, 1253, 1709, 2012, 2893, 2926 |
| HpySE526I | ACGT | 1 cut(s) | 1981 |
| Hsp92I | GRCGYC | 2 cut(s) | 2367, 2759 |
| Kpn2I | TCCGGA | 2 cut(s) | 371, 2143 |
| KroI | GCCGGC | 1 cut(s) | 3044 |
| KroNI | GCCGGC | 1 cut(s) | 3046 |
| LmnI | GCTCC | 9 cut(s) | 813, 1367, 2090, 2146, 2673, 2823, 2953, 3109, 3156 |
| Lsp1109I | GCAGC | 8 cut(s) | 284, 709, 1117, 1792, 1837, 1870, 2540, 3187 |
| MaeI | CTAG | 6 cut(s) | 204, 261, 927, 2297, 2468, 3015 |
| MaeII | ACGT | 1 cut(s) | 1981 |
| MfeI | CAATTG | 2 cut(s) | 1217, 2199 |
| MflI | RGATCY | 1 cut(s) | 1491 |
| MhlI | GDGCHC | 6 cut(s) | 487, 915, 1424, 2095, 2950, 2983 |
| MlyI | GAGTC | 5 cut(s) | 356, 587, 1168, 1661, 2041 |
| MmeI | TCCRAC | 6 cut(s) | 753, 1796, 2068, 2188, 2320, 2674 |
| Mph1103I | ATGCAT | 2 cut(s) | 1855, 2898 |
| MroI | TCCGGA | 2 cut(s) | 371, 2143 |
| MroNI | GCCGGC | 1 cut(s) | 3044 |
| MroXI | GAANNNNTTC | 1 cut(s) | 442 |
| MseI | TTAA | 6 cut(s) | 600, 1349, 1692, 1895, 2414, 2435 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1116 |
| MspA1I | CMGCKG | 3 cut(s) | 275, 461, 1335 |
| MspI | CCGG | 8 cut(s) | 32, 154, 372, 1079, 1500, 2144, 2460, 3045 |
| MspR9I | CCNGG | 5 cut(s) | 392, 918, 2025, 2461, 2727 |
| MunI | CAATTG | 2 cut(s) | 1217, 2199 |
| MvaI | CCWGG | 4 cut(s) | 392, 918, 2025, 2727 |
| MvnI | CGCG | 2 cut(s) | 286, 1578 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 37, 406, 467, 1253, 1709, 2012, 2893, 2926 |
| NaeI | GCCGGC | 1 cut(s) | 3046 |
| NciI | CCSGG | 1 cut(s) | 2461 |
| NdeI | CATATG | 2 cut(s) | 1677, 2898 |
| NgoMIV | GCCGGC | 1 cut(s) | 3044 |
| NmeAIII | GCCGAG | 4 cut(s) | 376, 814, 834, 3043 |
| NmuCI | GTSAC | 5 cut(s) | 341, 1297, 1760, 1982, 2237 |
| NruI | TCGCGA | 1 cut(s) | 286 |
| NsiI | ATGCAT | 2 cut(s) | 1855, 2898 |
| NspI | RCATGY | 2 cut(s) | 1725, 3094 |
| PaeI | GCATGC | 1 cut(s) | 3094 |
| PagI | TCATGA | 4 cut(s) | 55, 1393, 1462, 2067 |
| PceI | AGGCCT | 1 cut(s) | 2115 |
| PciI | ACATGT | 1 cut(s) | 1721 |
| PdiI | GCCGGC | 1 cut(s) | 3046 |
| PdmI | GAANNNNTTC | 1 cut(s) | 442 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 206, 982 |
| PinAI | ACCGGT | 2 cut(s) | 153, 1078 |
| PkrI | GCNGC | 9 cut(s) | 274, 402, 699, 1107, 1782, 1827, 1860, 2530, 3202 |
| PleI | GAGTC | 5 cut(s) | 356, 587, 1167, 1661, 2040 |
| PpsI | GAGTC | 5 cut(s) | 356, 587, 1167, 1661, 2040 |
| PpuMI | RGGWCCY | 1 cut(s) | 412 |
| PscI | ACATGT | 1 cut(s) | 1721 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1767 |
| PsiI | TTATAA | 2 cut(s) | 558, 1191 |
| Psp5II | RGGWCCY | 1 cut(s) | 412 |
| Psp6I | CCWGG | 4 cut(s) | 390, 916, 2023, 2725 |
| PspEI | GGTNACC | 2 cut(s) | 1297, 2157 |
| PspFI | CCCAGC | 1 cut(s) | 461 |
| PspGI | CCWGG | 4 cut(s) | 390, 916, 2023, 2725 |
| PspOMI | GGGCCC | 1 cut(s) | 1420 |
| PspPPI | RGGWCCY | 1 cut(s) | 412 |
| PstI | CTGCAG | 1 cut(s) | 1624 |
| PstNI | CAGNNNCTG | 2 cut(s) | 727, 3107 |
| PsuI | RGATCY | 1 cut(s) | 1491 |
| PvuII | CAGCTG | 2 cut(s) | 275, 461 |
| RruI | TCGCGA | 1 cut(s) | 286 |
| RsaI | GTAC | 5 cut(s) | 1051, 1126, 1344, 1682, 1806 |
| RsaNI | GTAC | 5 cut(s) | 1050, 1125, 1343, 1681, 1805 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1116 |
| SaqAI | TTAA | 6 cut(s) | 600, 1349, 1692, 1895, 2414, 2435 |
| SatI | GCNGC | 9 cut(s) | 273, 401, 698, 1106, 1781, 1826, 1859, 2529, 3201 |
| ScaI | AGTACT | 1 cut(s) | 1126 |
| SchI | GAGTC | 5 cut(s) | 356, 587, 1168, 1661, 2041 |
| ScrFI | CCNGG | 5 cut(s) | 392, 918, 2025, 2461, 2727 |
| SduI | GDGCHC | 6 cut(s) | 487, 915, 1424, 2095, 2950, 2983 |
| SfcI | CTRYAG | 1 cut(s) | 1620 |
| SinI | GGWCC | 8 cut(s) | 412, 1550, 1769, 2124, 2210, 2378, 2582, 3059 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1116 |
| SmlI | CTYRAG | 4 cut(s) | 1004, 1179, 1733, 3155 |
| SmoI | CTYRAG | 4 cut(s) | 1004, 1179, 1733, 3155 |
| SphI | GCATGC | 1 cut(s) | 3094 |
| SseBI | AGGCCT | 1 cut(s) | 2115 |
| SsiI | CCGC | 6 cut(s) | 42, 400, 1335, 2127, 2384, 2918 |
| SspMI | CTAG | 6 cut(s) | 204, 261, 927, 2297, 2468, 3015 |
| StuI | AGGCCT | 1 cut(s) | 2115 |
| StyD4I | CCNGG | 5 cut(s) | 390, 916, 2023, 2459, 2725 |
| StyI | CCWWGG | 1 cut(s) | 404 |
| TaaI | ACNGT | 7 cut(s) | 934, 1037, 1586, 1766, 1875, 2237, 3005 |
| TaiI | ACGT | 1 cut(s) | 1984 |
| TaqI | TCGA | 8 cut(s) | 150, 174, 496, 1063, 1284, 1742, 2283, 2392 |
| TatI | WGTACW | 2 cut(s) | 1124, 1680 |
| TauI | GCSGC | 1 cut(s) | 403 |
| Tru1I | TTAA | 6 cut(s) | 600, 1349, 1692, 1895, 2414, 2435 |
| Tru9I | TTAA | 6 cut(s) | 600, 1349, 1692, 1895, 2414, 2435 |
| TseFI | GTSAC | 5 cut(s) | 341, 1297, 1760, 1982, 2237 |
| TseI | GCWGC | 8 cut(s) | 272, 697, 1105, 1780, 1825, 1858, 2528, 3200 |
| Tsp45I | GTSAC | 5 cut(s) | 341, 1297, 1760, 1982, 2237 |
| TspGWI | ACGGA | 3 cut(s) | 2410, 2810, 3042 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 206, 982 |
| VneI | GTGCAC | 1 cut(s) | 2979 |
| VpaK11BI | GGWCC | 8 cut(s) | 412, 1550, 1769, 2124, 2210, 2378, 2582, 3059 |
| XapI | RAATTY | 5 cut(s) | 170, 994, 1165, 2446, 2749 |
| XceI | RCATGY | 2 cut(s) | 1725, 3094 |
| XmiI | GTMKAC | 3 cut(s) | 86, 629, 2456 |
| XmnI | GAANNNNTTC | 1 cut(s) | 442 |
| XspI | CTAG | 6 cut(s) | 204, 261, 927, 2297, 2468, 3015 |
| ZrmI | AGTACT | 1 cut(s) | 1126 |
| Zsp2I | ATGCAT | 2 cut(s) | 1855, 2898 |