isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G01290 AT4G01290 |
| fragaria_vesca | FvH4_7g15120 |
| malus_domestica | MD01G1069900.v1.1 MD07G1132600.v1.1 |
| prunus_persica | Prupe.2G176000_v2.0.a1 |
| pyrus_communis | pycom01g09910 pycom07g12940 |
| rosa_chinensis | RchiOBHm_Chr1g0357311 |
| rosa_laevigata | RLG00000028028 |
| rosa_multiflora | Rmu_sc0000316.1_g000002 Rmu_sc0011531.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00298860 |
| rosa_rugosa | Rorug01G0256200 |
| rosa_samantha | Rh1AG269600 Rh1BG237500 Rh1CG253800 Rh1DG265400 |
| rosa_wichuraiana | Rw1G023880 Rw1G023980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 561, 1233 |
| Acc36I | ACCTGC | 3 cut(s) | 403, 1489, 1627 |
| Acc65I | GGTACC | 1 cut(s) | 841 |
| AccB1I | GGYRCC | 1 cut(s) | 841 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 299, 985, 1361 |
| AccBSI | CCGCTC | 1 cut(s) | 2281 |
| AccI | GTMKAC | 3 cut(s) | 86, 875, 2438 |
| AccII | CGCG | 1 cut(s) | 289 |
| AccIII | TCCGGA | 1 cut(s) | 1001 |
| AciI | CCGC | 9 cut(s) | 275, 289, 403, 1344, 2159, 2281, 2816, 2945, 3237 |
| AclI | AACGTT | 1 cut(s) | 2726 |
| AclWI | GGATC | 5 cut(s) | 42, 2567, 2580, 2794, 2804 |
| AcoI | YGGCCR | 3 cut(s) | 290, 3069, 3092 |
| AcsI | RAATTY | 7 cut(s) | 170, 997, 1174, 1935, 2428, 2776, 3213 |
| AcuI | CTGAAG | 3 cut(s) | 752, 1692, 2403 |
| AcvI | CACGTG | 1 cut(s) | 2144 |
| AcyI | GRCGYC | 2 cut(s) | 2349, 2786 |
| AfaI | GTAC | 7 cut(s) | 843, 1054, 1353, 1690, 1797, 2215, 3260 |
| AflIII | ACRYGT | 2 cut(s) | 1721, 2141 |
| AgeI | ACCGGT | 1 cut(s) | 1081 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2335 |
| AhlI | ACTAGT | 1 cut(s) | 2171 |
| AjiI | CACGTC | 1 cut(s) | 554 |
| AjnI | CCWGG | 2 cut(s) | 919, 2752 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 936, 968, 2028, 2060 |
| Alw21I | GWGCWC | 3 cut(s) | 1138, 2086, 2977 |
| Alw26I | GTCTC | 5 cut(s) | 402, 796, 1910, 2132, 2635 |
| AlwI | GGATC | 5 cut(s) | 42, 2567, 2580, 2794, 2804 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 730, 3134 |
| Ama87I | CYCGRG | 1 cut(s) | 837 |
| Aor13HI | TCCGGA | 1 cut(s) | 1001 |
| ApaI | GGGCCC | 1 cut(s) | 3008 |
| ApeKI | GCWGC | 7 cut(s) | 485, 700, 1108, 1703, 1849, 1994, 2873 |
| ApoI | RAATTY | 7 cut(s) | 170, 997, 1174, 1935, 2428, 2776, 3213 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 3266 |
| AsiGI | ACCGGT | 1 cut(s) | 1081 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 445, 673, 1935 |
| Asp718I | GGTACC | 1 cut(s) | 841 |
| AspLEI | GCGC | 1 cut(s) | 568 |
| AspS9I | GGNCC | 9 cut(s) | 415, 1550, 2201, 2360, 2609, 2627, 3004, 3005, 3086 |
| AsuC2I | CCSGG | 1 cut(s) | 2443 |
| AsuHPI | GGTGA | 5 cut(s) | 85, 281, 1676, 2420, 2894 |
| AsuII | TTCGAA | 2 cut(s) | 1442, 2867 |
| AsuNHI | GCTAGC | 1 cut(s) | 929 |
| AvaI | CYCGRG | 1 cut(s) | 837 |
| AvaII | GGWCC | 5 cut(s) | 415, 1550, 2201, 2609, 3086 |
| AxyI | CCTNAGG | 1 cut(s) | 3162 |
| BaeGI | GKGCMC | 2 cut(s) | 1880, 3008 |
| BamHI | GGATCC | 1 cut(s) | 2572 |
| BanI | GGYRCC | 1 cut(s) | 841 |
| BanII | GRGCYC | 2 cut(s) | 1424, 3008 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1303, 1335 |
| BbrPI | CACGTG | 1 cut(s) | 2144 |
| BbsI | GAAGAC | 2 cut(s) | 648, 1476 |
| Bbv12I | GWGCWC | 3 cut(s) | 1138, 2086, 2977 |
| BbvI | GCAGC | 7 cut(s) | 497, 712, 1120, 1715, 1861, 1981, 2860 |
| BciT130I | CCWGG | 2 cut(s) | 921, 2754 |
| BclI | TGATCA | 1 cut(s) | 1837 |
| BcnI | CCSGG | 1 cut(s) | 2443 |
| BcoDI | GTCTC | 5 cut(s) | 402, 796, 1910, 2132, 2635 |
| BcuI | ACTAGT | 1 cut(s) | 2171 |
| BfaI | CTAG | 7 cut(s) | 207, 264, 903, 930, 2172, 2306, 2450 |
| BfmI | CTRYAG | 1 cut(s) | 1620 |
| BfoI | RGCGCY | 1 cut(s) | 569 |
| BfuAI | ACCTGC | 3 cut(s) | 403, 1489, 1627 |
| BglII | AGATCT | 1 cut(s) | 1729 |
| BlpI | GCTNAGC | 1 cut(s) | 831 |
| BmcAI | AGTACT | 2 cut(s) | 1690, 2215 |
| Bme1390I | CCNGG | 3 cut(s) | 921, 2443, 2754 |
| Bme18I | GGWCC | 5 cut(s) | 415, 1550, 2201, 2609, 3086 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2335 |
| BmeT110I | CYCGRG | 1 cut(s) | 837 |
| BmgBI | CACGTC | 1 cut(s) | 554 |
| BmgT120I | GGNCC | 9 cut(s) | 415, 1550, 2201, 2360, 2609, 2627, 3004, 3005, 3086 |
| BmrFI | CCNGG | 3 cut(s) | 921, 2443, 2754 |
| BmsI | GCATC | 8 cut(s) | 169, 262, 860, 1120, 1931, 2533, 2881, 2910 |
| BmtI | GCTAGC | 1 cut(s) | 933 |
| BpiI | GAAGAC | 2 cut(s) | 648, 1476 |
| BpmI | CTGGAG | 3 cut(s) | 495, 2118, 2961 |
| Bpu10I | CCTNAGC | 2 cut(s) | 420, 1574 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 831 |
| Bpu14I | TTCGAA | 2 cut(s) | 1442, 2867 |
| BpuEI | CTTGAG | 5 cut(s) | 1028, 1173, 1754, 1906, 3203 |
| BpuMI | CCSGG | 1 cut(s) | 2443 |
| Bsa29I | ATCGAT | 1 cut(s) | 2274 |
| BsaAI | YACGTR | 1 cut(s) | 2144 |
| BsaBI | GATNNNNATC | 2 cut(s) | 513, 2748 |
| BsaHI | GRCGYC | 2 cut(s) | 2349, 2786 |
| BsaJI | CCNNGG | 5 cut(s) | 407, 836, 919, 2576, 3089 |
| BsaWI | WCCGGW | 3 cut(s) | 31, 1001, 1081 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1909, 1939, 2073, 2103, 2679, 2709 |
| Bse118I | RCCGGY | 2 cut(s) | 1081, 3071 |
| Bse1I | ACTGG | 6 cut(s) | 394, 1332, 2087, 2970, 3095, 3276 |
| Bse21I | CCTNAGG | 1 cut(s) | 3162 |
| Bse3DI | GCAATG | 2 cut(s) | 2764, 3167 |
| Bse8I | GATNNNNATC | 2 cut(s) | 513, 2748 |
| BseAI | TCCGGA | 1 cut(s) | 1001 |
| BseBI | CCWGG | 2 cut(s) | 921, 2754 |
| BseCI | ATCGAT | 1 cut(s) | 2274 |
| BseDI | CCNNGG | 5 cut(s) | 407, 836, 919, 2576, 3089 |
| BseJI | GATNNNNATC | 2 cut(s) | 513, 2748 |
| BseMI | GCAATG | 2 cut(s) | 2764, 3167 |
| BseMII | CTCAG | 6 cut(s) | 411, 822, 1466, 1662, 2783, 3153 |
| BseNI | ACTGG | 6 cut(s) | 394, 1332, 2087, 2970, 3095, 3276 |
| BseRI | GAGGAG | 4 cut(s) | 809, 1363, 2461, 2979 |
| BseSI | GKGCMC | 2 cut(s) | 1880, 3008 |
| BseXI | GCAGC | 7 cut(s) | 497, 712, 1120, 1715, 1861, 1981, 2860 |
| BseYI | CCCAGC | 1 cut(s) | 464 |
| BsgI | GTGCAG | 3 cut(s) | 1368, 1953, 2859 |
| Bsh1236I | CGCG | 1 cut(s) | 289 |
| BshNI | GGYRCC | 1 cut(s) | 841 |
| BshTI | ACCGGT | 1 cut(s) | 1081 |
| BshVI | ATCGAT | 1 cut(s) | 2274 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1138, 2086, 2977 |
| BsiHKCI | CYCGRG | 1 cut(s) | 837 |
| BsiSI | CCGG | 7 cut(s) | 32, 737, 1002, 1082, 1548, 2442, 3072 |
| BslFI | GGGAC | 2 cut(s) | 401, 1966 |
| BsmAI | GTCTC | 5 cut(s) | 402, 796, 1910, 2132, 2635 |
| BsmFI | GGGAC | 2 cut(s) | 401, 1966 |
| BsoBI | CYCGRG | 1 cut(s) | 837 |
| Bsp119I | TTCGAA | 2 cut(s) | 1442, 2867 |
| Bsp120I | GGGCCC | 1 cut(s) | 3004 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1138, 1424, 1880, 2086, 2977, 3008 |
| Bsp13I | TCCGGA | 1 cut(s) | 1001 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 831 |
| BspACI | CCGC | 9 cut(s) | 275, 289, 403, 1344, 2159, 2281, 2816, 2945, 3237 |
| BspCNI | CTCAG | 6 cut(s) | 412, 823, 1465, 1663, 2782, 3154 |
| BspDI | ATCGAT | 1 cut(s) | 2274 |
| BspEI | TCCGGA | 1 cut(s) | 1001 |
| BspFNI | CGCG | 1 cut(s) | 289 |
| BspHI | TCATGA | 2 cut(s) | 55, 1462 |
| BspMAI | CTGCAG | 1 cut(s) | 1624 |
| BspMI | ACCTGC | 3 cut(s) | 403, 1489, 1627 |
| BspOI | GCTAGC | 1 cut(s) | 933 |
| BspPI | GGATC | 5 cut(s) | 42, 2567, 2580, 2794, 2804 |
| BspQI | GCTCTTC | 1 cut(s) | 12 |
| BspT104I | TTCGAA | 2 cut(s) | 1442, 2867 |
| BspT107I | GGYRCC | 1 cut(s) | 841 |
| BsrBI | CCGCTC | 1 cut(s) | 2281 |
| BsrDI | GCAATG | 2 cut(s) | 2764, 3167 |
| BsrFI | RCCGGY | 2 cut(s) | 1081, 3071 |
| BsrI | ACTGG | 6 cut(s) | 394, 1332, 2087, 2970, 3095, 3276 |
| BssAI | RCCGGY | 2 cut(s) | 1081, 3071 |
| BssECI | CCNNGG | 5 cut(s) | 407, 836, 919, 2576, 3089 |
| BssNAI | GTATAC | 1 cut(s) | 87 |
| BssNI | GRCGYC | 2 cut(s) | 2349, 2786 |
| BssT1I | CCWWGG | 2 cut(s) | 407, 2576 |
| Bst1107I | GTATAC | 1 cut(s) | 87 |
| Bst2UI | CCWGG | 2 cut(s) | 921, 2754 |
| Bst4CI | ACNGT | 6 cut(s) | 540, 937, 1040, 1432, 2228, 3032 |
| Bst6I | CTCTTC | 7 cut(s) | 12, 648, 664, 794, 1444, 2015, 2379 |
| BstACI | GRCGYC | 2 cut(s) | 2349, 2786 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2920 |
| BstBAI | YACGTR | 1 cut(s) | 2144 |
| BstBI | TTCGAA | 2 cut(s) | 1442, 2867 |
| BstEII | GGTNACC | 1 cut(s) | 1034 |
| BstFNI | CGCG | 1 cut(s) | 289 |
| BstH2I | RGCGCY | 1 cut(s) | 569 |
| BstHHI | GCGC | 1 cut(s) | 568 |
| BstMAI | GTCTC | 5 cut(s) | 402, 796, 1910, 2132, 2635 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 409, 470, 1262, 1619, 1709, 2920, 2953 |
| BstNI | CCWGG | 2 cut(s) | 921, 2754 |
| BstNSI | RCATGY | 3 cut(s) | 352, 1725, 3121 |
| BstPI | GGTNACC | 1 cut(s) | 1034 |
| BstSCI | CCNGG | 3 cut(s) | 919, 2441, 2752 |
| BstSFI | CTRYAG | 1 cut(s) | 1620 |
| BstSLI | GKGCMC | 2 cut(s) | 1880, 3008 |
| BstUI | CGCG | 1 cut(s) | 289 |
| BstV1I | GCAGC | 7 cut(s) | 497, 712, 1120, 1715, 1861, 1981, 2860 |
| BstV2I | GAAGAC | 2 cut(s) | 648, 1476 |
| BstX2I | RGATCY | 2 cut(s) | 1729, 2572 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2606 |
| BstYI | RGATCY | 2 cut(s) | 1729, 2572 |
| BstZ17I | GTATAC | 1 cut(s) | 87 |
| Bsu15I | ATCGAT | 1 cut(s) | 2274 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3162 |
| BsuTUI | ATCGAT | 1 cut(s) | 2274 |
| BtgZI | GCGATG | 1 cut(s) | 3108 |
| BtrI | CACGTC | 1 cut(s) | 554 |
| BtsI | GCAGTG | 5 cut(s) | 337, 826, 1422, 1629, 1965 |
| BtsIMutI | CAGTG | 9 cut(s) | 337, 826, 1422, 1428, 1460, 1629, 1965, 2233, 2977 |
| BveI | ACCTGC | 3 cut(s) | 403, 1489, 1627 |
| CaiI | CAGNNNCTG | 2 cut(s) | 730, 3134 |
| CciI | TCATGA | 2 cut(s) | 55, 1462 |
| CfoI | GCGC | 1 cut(s) | 568 |
| Cfr10I | RCCGGY | 2 cut(s) | 1081, 3071 |
| Cfr13I | GGNCC | 9 cut(s) | 415, 1550, 2201, 2360, 2609, 2627, 3004, 3005, 3086 |
| ClaI | ATCGAT | 1 cut(s) | 2274 |
| CseI | GACGC | 4 cut(s) | 336, 1304, 2338, 2794 |
| Csp6I | GTAC | 7 cut(s) | 842, 1053, 1352, 1689, 1796, 2214, 3259 |
| CspAI | ACCGGT | 1 cut(s) | 1081 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3088, 3123 |
| CviQI | GTAC | 7 cut(s) | 842, 1053, 1352, 1689, 1796, 2214, 3259 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2335 |
| EaeI | YGGCCR | 3 cut(s) | 290, 3069, 3092 |
| Eam1104I | CTCTTC | 7 cut(s) | 12, 648, 664, 794, 1444, 2015, 2379 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2335 |
| EarI | CTCTTC | 7 cut(s) | 12, 648, 664, 794, 1444, 2015, 2379 |
| EciI | GGCGGA | 1 cut(s) | 2934 |
| Eco130I | CCWWGG | 2 cut(s) | 407, 2576 |
| Eco147I | AGGCCT | 2 cut(s) | 1630, 2106 |
| Eco24I | GRGCYC | 2 cut(s) | 1424, 3008 |
| Eco47I | GGWCC | 5 cut(s) | 415, 1550, 2201, 2609, 3086 |
| Eco57I | CTGAAG | 3 cut(s) | 752, 1692, 2403 |
| Eco72I | CACGTG | 1 cut(s) | 2144 |
| Eco81I | CCTNAGG | 1 cut(s) | 3162 |
| Eco88I | CYCGRG | 1 cut(s) | 837 |
| Eco91I | GGTNACC | 1 cut(s) | 1034 |
| EcoO109I | RGGNCCY | 2 cut(s) | 415, 3004 |
| EcoO65I | GGTNACC | 1 cut(s) | 1034 |
| EcoRI | GAATTC | 2 cut(s) | 170, 997 |
| EcoRII | CCWGG | 2 cut(s) | 919, 2752 |
| EcoT14I | CCWWGG | 2 cut(s) | 407, 2576 |
| EcoT22I | ATGCAT | 1 cut(s) | 2925 |
| EcoT38I | GRGCYC | 2 cut(s) | 1424, 3008 |
| ErhI | CCWWGG | 2 cut(s) | 407, 2576 |
| FaqI | GGGAC | 2 cut(s) | 401, 1966 |
| FauI | CCCGC | 1 cut(s) | 3230 |
| FauNDI | CATATG | 1 cut(s) | 2925 |
| FbaI | TGATCA | 1 cut(s) | 1837 |
| FblI | GTMKAC | 3 cut(s) | 86, 875, 2438 |
| FriOI | GRGCYC | 2 cut(s) | 1424, 3008 |
| FspBI | CTAG | 7 cut(s) | 207, 264, 903, 930, 2172, 2306, 2450 |
| GlaI | GCGC | 1 cut(s) | 567 |
| GsaI | CCCAGC | 1 cut(s) | 468 |
| GsuI | CTGGAG | 3 cut(s) | 495, 2118, 2961 |
| HaeII | RGCGCY | 1 cut(s) | 569 |
| HapII | CCGG | 7 cut(s) | 32, 737, 1002, 1082, 1548, 2442, 3072 |
| HgaI | GACGC | 4 cut(s) | 336, 1304, 2338, 2794 |
| HhaI | GCGC | 1 cut(s) | 568 |
| Hin1I | GRCGYC | 2 cut(s) | 2349, 2786 |
| Hin6I | GCGC | 1 cut(s) | 566 |
| HinP1I | GCGC | 1 cut(s) | 566 |
| HincII | GTYRAC | 3 cut(s) | 1435, 2491, 3100 |
| HindII | GTYRAC | 3 cut(s) | 1435, 2491, 3100 |
| HindIII | AAGCTT | 3 cut(s) | 1254, 1263, 1334 |
| HpaII | CCGG | 7 cut(s) | 32, 737, 1002, 1082, 1548, 2442, 3072 |
| HphI | GGTGA | 5 cut(s) | 85, 281, 1676, 2420, 2894 |
| Hpy166II | GTNNAC | 9 cut(s) | 87, 876, 1435, 2411, 2439, 2491, 2612, 2852, 3100 |
| Hpy8I | GTNNAC | 9 cut(s) | 87, 876, 1435, 2411, 2439, 2491, 2612, 2852, 3100 |
| Hpy99I | CGWCG | 1 cut(s) | 1298 |
| HpyCH4III | ACNGT | 6 cut(s) | 540, 937, 1040, 1432, 2228, 3032 |
| HpyCH4IV | ACGT | 3 cut(s) | 553, 2143, 2726 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 409, 470, 1262, 1619, 1709, 2920, 2953 |
| HpySE526I | ACGT | 3 cut(s) | 553, 2143, 2726 |
| Hsp92I | GRCGYC | 2 cut(s) | 2349, 2786 |
| HspAI | GCGC | 1 cut(s) | 566 |
| Kpn2I | TCCGGA | 1 cut(s) | 1001 |
| KpnI | GGTACC | 1 cut(s) | 845 |
| KroI | GCCGGC | 1 cut(s) | 3071 |
| KroNI | GCCGGC | 1 cut(s) | 3073 |
| Ksp22I | TGATCA | 1 cut(s) | 1837 |
| LguI | GCTCTTC | 1 cut(s) | 12 |
| LmnI | GCTCC | 6 cut(s) | 1376, 2081, 2700, 2980, 3136, 3183 |
| Lsp1109I | GCAGC | 7 cut(s) | 497, 712, 1120, 1715, 1861, 1981, 2860 |
| LweI | GCATC | 8 cut(s) | 169, 262, 860, 1120, 1931, 2533, 2881, 2910 |
| MaeI | CTAG | 7 cut(s) | 207, 264, 903, 930, 2172, 2306, 2450 |
| MaeII | ACGT | 3 cut(s) | 553, 2143, 2726 |
| MaeIII | GTNAC | 6 cut(s) | 135, 344, 1034, 1664, 2222, 2228 |
| MbiI | CCGCTC | 1 cut(s) | 2281 |
| MflI | RGATCY | 2 cut(s) | 1729, 2572 |
| MhlI | GDGCHC | 6 cut(s) | 1138, 1424, 1880, 2086, 2977, 3008 |
| MlyI | GAGTC | 7 cut(s) | 322, 359, 590, 886, 1661, 2032, 2513 |
| MmeI | TCCRAC | 4 cut(s) | 1513, 2059, 2179, 2701 |
| Mph1103I | ATGCAT | 1 cut(s) | 2925 |
| MroI | TCCGGA | 1 cut(s) | 1001 |
| MroNI | GCCGGC | 1 cut(s) | 3071 |
| MroXI | GAANNNNTTC | 3 cut(s) | 445, 673, 1935 |
| MseI | TTAA | 3 cut(s) | 603, 1358, 2670 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1119, 1214 |
| MspA1I | CMGCKG | 3 cut(s) | 464, 830, 1344 |
| MspI | CCGG | 7 cut(s) | 32, 737, 1002, 1082, 1548, 2442, 3072 |
| MspR9I | CCNGG | 3 cut(s) | 921, 2443, 2754 |
| MvaI | CCWGG | 2 cut(s) | 921, 2754 |
| MvnI | CGCG | 1 cut(s) | 289 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 409, 470, 1262, 1619, 1709, 2920, 2953 |
| NaeI | GCCGGC | 1 cut(s) | 3073 |
| NciI | CCSGG | 1 cut(s) | 2443 |
| NdeI | CATATG | 1 cut(s) | 2925 |
| NgoMIV | GCCGGC | 1 cut(s) | 3071 |
| NheI | GCTAGC | 1 cut(s) | 929 |
| NmeAIII | GCCGAG | 2 cut(s) | 379, 3070 |
| NmuCI | GTSAC | 3 cut(s) | 344, 1664, 2228 |
| NsiI | ATGCAT | 1 cut(s) | 2925 |
| NspI | RCATGY | 3 cut(s) | 352, 1725, 3121 |
| NspV | TTCGAA | 2 cut(s) | 1442, 2867 |
| PaeI | GCATGC | 1 cut(s) | 3121 |
| PagI | TCATGA | 2 cut(s) | 55, 1462 |
| PceI | AGGCCT | 2 cut(s) | 1630, 2106 |
| PciI | ACATGT | 1 cut(s) | 1721 |
| PciSI | GCTCTTC | 1 cut(s) | 12 |
| PdiI | GCCGGC | 1 cut(s) | 3073 |
| PdmI | GAANNNNTTC | 3 cut(s) | 445, 673, 1935 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 299, 985, 1361 |
| PinAI | ACCGGT | 1 cut(s) | 1081 |
| PleI | GAGTC | 7 cut(s) | 321, 359, 590, 886, 1661, 2031, 2513 |
| PmaCI | CACGTG | 1 cut(s) | 2144 |
| PmlI | CACGTG | 1 cut(s) | 2144 |
| PpsI | GAGTC | 7 cut(s) | 321, 359, 590, 886, 1661, 2031, 2513 |
| Ppu21I | YACGTR | 1 cut(s) | 2144 |
| PpuMI | RGGWCCY | 1 cut(s) | 415 |
| PscI | ACATGT | 1 cut(s) | 1721 |
| PsiI | TTATAA | 2 cut(s) | 561, 1233 |
| Psp1406I | AACGTT | 1 cut(s) | 2726 |
| Psp5II | RGGWCCY | 1 cut(s) | 415 |
| Psp6I | CCWGG | 2 cut(s) | 919, 2752 |
| PspCI | CACGTG | 1 cut(s) | 2144 |
| PspEI | GGTNACC | 1 cut(s) | 1034 |
| PspFI | CCCAGC | 1 cut(s) | 464 |
| PspGI | CCWGG | 2 cut(s) | 919, 2752 |
| PspOMI | GGGCCC | 1 cut(s) | 3004 |
| PspPI | GGNCC | 9 cut(s) | 415, 1550, 2201, 2360, 2609, 2627, 3004, 3005, 3086 |
| PspPPI | RGGWCCY | 1 cut(s) | 415 |
| PstI | CTGCAG | 1 cut(s) | 1624 |
| PstNI | CAGNNNCTG | 2 cut(s) | 730, 3134 |
| PsuI | RGATCY | 2 cut(s) | 1729, 2572 |
| PvuII | CAGCTG | 2 cut(s) | 464, 830 |
| RsaI | GTAC | 7 cut(s) | 843, 1054, 1353, 1690, 1797, 2215, 3260 |
| RsaNI | GTAC | 7 cut(s) | 842, 1053, 1352, 1689, 1796, 2214, 3259 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1119, 1214 |
| SapI | GCTCTTC | 1 cut(s) | 12 |
| SaqAI | TTAA | 3 cut(s) | 603, 1358, 2670 |
| Sau96I | GGNCC | 9 cut(s) | 415, 1550, 2201, 2360, 2609, 2627, 3004, 3005, 3086 |
| ScaI | AGTACT | 2 cut(s) | 1690, 2215 |
| SchI | GAGTC | 7 cut(s) | 322, 359, 590, 886, 1661, 2032, 2513 |
| ScrFI | CCNGG | 3 cut(s) | 921, 2443, 2754 |
| SduI | GDGCHC | 6 cut(s) | 1138, 1424, 1880, 2086, 2977, 3008 |
| SfaNI | GCATC | 8 cut(s) | 169, 262, 860, 1120, 1931, 2533, 2881, 2910 |
| SfcI | CTRYAG | 1 cut(s) | 1620 |
| SfuI | TTCGAA | 2 cut(s) | 1442, 2867 |
| SinI | GGWCC | 5 cut(s) | 415, 1550, 2201, 2609, 3086 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1119, 1214 |
| SmlI | CTYRAG | 5 cut(s) | 1007, 1188, 1733, 1885, 3182 |
| SmoI | CTYRAG | 5 cut(s) | 1007, 1188, 1733, 1885, 3182 |
| SpeI | ACTAGT | 1 cut(s) | 2171 |
| SphI | GCATGC | 1 cut(s) | 3121 |
| SseBI | AGGCCT | 2 cut(s) | 1630, 2106 |
| SsiI | CCGC | 9 cut(s) | 275, 289, 403, 1344, 2159, 2281, 2816, 2945, 3237 |
| SspMI | CTAG | 7 cut(s) | 207, 264, 903, 930, 2172, 2306, 2450 |
| StuI | AGGCCT | 2 cut(s) | 1630, 2106 |
| StyD4I | CCNGG | 3 cut(s) | 919, 2441, 2752 |
| StyI | CCWWGG | 2 cut(s) | 407, 2576 |
| TaaI | ACNGT | 6 cut(s) | 540, 937, 1040, 1432, 2228, 3032 |
| TaiI | ACGT | 3 cut(s) | 556, 2146, 2729 |
| TaqII | GACCGA | 1 cut(s) | 168 |
| TatI | WGTACW | 2 cut(s) | 1688, 2213 |
| TauI | GCSGC | 3 cut(s) | 278, 292, 406 |
| Tru1I | TTAA | 3 cut(s) | 603, 1358, 2670 |
| Tru9I | TTAA | 3 cut(s) | 603, 1358, 2670 |
| TscAI | CASTG | 9 cut(s) | 337, 826, 1422, 1435, 1460, 1629, 1972, 2233, 2977 |
| TseFI | GTSAC | 3 cut(s) | 344, 1664, 2228 |
| TseI | GCWGC | 7 cut(s) | 485, 700, 1108, 1703, 1849, 1994, 2873 |
| Tsp45I | GTSAC | 3 cut(s) | 344, 1664, 2228 |
| TspGWI | ACGGA | 1 cut(s) | 3276 |
| TspRI | CASTG | 9 cut(s) | 337, 826, 1422, 1435, 1460, 1629, 1972, 2233, 2977 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 299, 985, 1361 |
| VpaK11BI | GGWCC | 5 cut(s) | 415, 1550, 2201, 2609, 3086 |
| XapI | RAATTY | 7 cut(s) | 170, 997, 1174, 1935, 2428, 2776, 3213 |
| XbaI | TCTAGA | 1 cut(s) | 2305 |
| XceI | RCATGY | 3 cut(s) | 352, 1725, 3121 |
| XmiI | GTMKAC | 3 cut(s) | 86, 875, 2438 |
| XmnI | GAANNNNTTC | 3 cut(s) | 445, 673, 1935 |
| XspI | CTAG | 7 cut(s) | 207, 264, 903, 930, 2172, 2306, 2450 |
| ZrmI | AGTACT | 2 cut(s) | 1690, 2215 |
| Zsp2I | ATGCAT | 1 cut(s) | 2925 |