AT4G03400

GH3 auxin-responsive promoter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0011188
Physical Location & Seq
Reverse (-)
1497536 .. 1501599
4064 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03400.2

Sequence Viewer

Length: 1776 bp
ATGGAAACTGTAGAAGCGGGGCATGATGATGTTATTGGTTGGTTCGAGCATGTGTCGGAAAATGCCTGCAAGGTCCAAAGCGAGACGCTACGAAGGATTCTTGAGCTCAACTCCGGAGTGGAGTATCTGAGGAAATGGCTTGGGACTGTTGATGTAGAAAAGATGGACGATTATACTTTGGAAACTCTCTTTACTTCCTTGGTGCCTATTGTTTCACATGCTGATTTAGATCCTTATATTCAAAGAATTGCAGATGGAGAGACTTCTCCATTACTTACACAAGAACCCATCACTGTTCTGTCCCTCAGCTCTGGAACAACAGAAGGGAGACAAAAGTATGTTCCGTTTACTCGCCATAGCGCGCAAACTACTCTTCAGATTTTCCGATTATCAGCGGCTTACAGATCAAGGTTTTATCCAATAAGGGAAGGAGGGAGGATTCTTGAGTTTATATACGCCGGGAAGGAATTTAAGACGCTAGGAGGATTGACAGTAGGAACGGCCACAACACATTACTATGCGAGCGAAGAGTTTAAAACTAAGCAAGAGACAACAAAATCCTTCACTTGTAGCCCACAAGAGGTCATCTCAGGAGGTGATTTCGGTCAGTGCACGTATTGTCATCTCCTACTTGGTCTCCATTACTCCAGCCAAGTAGAGTTTGTCGCCTCTGCTTTTTCTTACACCATTGTCCAAGCTTTCTCCTTTTTCGAAGAAATCTGGAGAGAGATATGTGCTGACATCAAGGAAGGTAATCTTAGCTCAAGAATCACTCTGCCCAAGATGAGAAAAGCTGTATTGGCTCTGATCAGACCAAACCCGTCTCTTGCTTCTCATATCGAGGAGATCTGCTTAGAGCTGGAAACAAATCTCGGATGGTTCGGTTTGATTTCAAAGCTTTGGCCAAATGCAAAATTTATCTCCTCAATCATGACGGGTTCTATGCTGCCGTACCTGAATAAGCTGAGGCATTACGCTGGCGGTTTGCCCCTGGTGAGCGCAGATTACGGGTCAACCGAGAGCTGGATTGGTGTGAACGTTGATCCTCATCTTCCCCCAGAAGACGTGAGCTTTGCTGTGATTCCCACTTTTAGTTACTTCGAGTTTATACCACTTTACAGGCGGCAGAATCAATCAGACATATGCATTGACGGTGACTTTGTCGAAGATAAACCTGTGCCGCTCTCTCAAGTCAAACTCGGGCAGGAGTATGAACTTGTTCTAACCACTTTCACAGGTCTTTATAGGTACAGATTAGGAGACGTAGTTGAAGTGACCAGTTTTCACAAAGGCACACCGAAGCTAAGTTTCATATACAGAAGAAAACTCATCTTAACCATCAACATTGACAAAAACACAGAGAAGGATCTTCAGAGAGTTGTTGACAAGGCGTCTCAGCTTCTGAGCCGATCCACACGAGCTGAAGTCGTTGACTTTACAAGCCACGCAGACGTTATAGCTCGTCCTGGTCACTATGTAATCTACTGGGAAATCAGAGGAGAAGCAGATGATAAGGCTCTTGAAGAATGTTGCAGAGAGATGGATACTGCTTTTGTGGACTATGGTTATGTAGTGTCGAGGCGCATGAACTCGATCGGACCGCTTGAGCTACGAGTTGTGGAACGAGGAACGTTTGGGAAAGTGGCGGAAAGGTGCGTTGGGAAATGCGGTGGCTTGAACCAGTTTAAGACTCCTAGGTGTACGACCAATTCTGTTATGCTTGACATACTTAATGATTCTACTATCAAGAGATTTCGCAGTTCAGCTTATGACTAG

Protein Analysis

591

Amino Acids

66.86

Weight (kDa)

5.74

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GH3 PF03321 12 - 331 5.4e-101 GH3 family N-terminal domain
GH3_M PF23571 359 - 440 1.1e-26 GH3 family central domain
GH3_C PF23572 455 - 570 3e-32 GH3 family C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011188)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03400 AT4G03400
fragaria_vesca FvH4_6g44990 FvH4_6g44990
malus_domestica MD17G1081000.v1.1
prunus_persica Prupe.3G233900_v2.0.a1
pyrus_communis pycom09g01640
rosa_chinensis RchiOBHm_Chr2g0162261
rosa_laevigata RLG00000021331
rosa_multiflora Rmu_sc0004020.1_g000022
rosa_roxburghii Rroxscaffold_2G00088210
rosa_rugosa Rorug02G0495700 Rorug02G0495800 Rorug02G0495900 Rorug02G0496000
rosa_samantha Rh2AG562000 Rh2BG575100 Rh2CG545300 Rh2DG585000
rosa_wichuraiana Rw2G046540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 202
AccBSI CCGCTC 1 cut(s) 1183
AccII CGCG 1 cut(s) 362
AccIII TCCGGA 1 cut(s) 113
AciI CCGC 8 cut(s) 17, 395, 981, 1123, 1181, 1601, 1646, 1668
AclI AACGTT 2 cut(s) 1038, 1631
AclWI GGATC 4 cut(s) 224, 1037, 1374, 1404
AcoI YGGCCR 2 cut(s) 501, 902
AcsI RAATTY 2 cut(s) 467, 914
AcuI CTGAAG 3 cut(s) 359, 1355, 1443
AcyI GRCGYC 1 cut(s) 1391
AfaI GTAC 3 cut(s) 953, 1250, 1702
AfiI CCNNNNNNNGG 2 cut(s) 580, 1023
AgsI TTSAA 5 cut(s) 242, 894, 1271, 1523, 1678
AhdI GACNNNNNGTC 1 cut(s) 1390
AjiI CACGTC 1 cut(s) 1066
AjnI CCWGG 2 cut(s) 990, 1465
AjuI GAANNNNNNNTTGG 2 cut(s) 1641, 1673
Alw21I GWGCWC 2 cut(s) 108, 614
Alw26I GTCTC 8 cut(s) 77, 254, 322, 542, 641, 828, 1254, 1398
Alw44I GTGCAC 1 cut(s) 610
AlwI GGATC 4 cut(s) 224, 1037, 1374, 1404
AlwNI CAGNNNCTG 1 cut(s) 1402
Ama87I CYCGRG 1 cut(s) 1199
Aor13HI TCCGGA 1 cut(s) 113
AoxI GGCC 2 cut(s) 501, 902
ApaLI GTGCAC 1 cut(s) 610
ApeKI GCWGC 1 cut(s) 946
ApoI RAATTY 2 cut(s) 467, 914
ArsI GACNNNNNNTTYG 4 cut(s) 1055, 1087, 1142, 1174
Asp700I GAANNNNTTC 1 cut(s) 1218
AspA2I CCTAGG 1 cut(s) 1694
AspLEI GCGC 4 cut(s) 362, 364, 1001, 1584
AspS9I GGNCC 2 cut(s) 73, 1598
AsuC2I CCSGG 1 cut(s) 460
AsuHPI GGTGA 3 cut(s) 608, 1006, 1166
AsuII TTCGAA 1 cut(s) 711
AvaI CYCGRG 1 cut(s) 1199
AvaII GGWCC 2 cut(s) 73, 1598
AvrII CCTAGG 1 cut(s) 1694
BaeGI GKGCMC 1 cut(s) 614
BalI TGGCCA 1 cut(s) 904
BanI GGYRCC 1 cut(s) 202
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 1 cut(s) 1416
BbsI GAAGAC 1 cut(s) 1068
Bbv12I GWGCWC 2 cut(s) 108, 614
BbvCI CCTCAGC 2 cut(s) 305, 965
BbvI GCAGC 1 cut(s) 933
BccI CCATC 6 cut(s) 157, 248, 296, 870, 1346, 1534
BceAI ACGGC 2 cut(s) 516, 934
BciT130I CCWGG 2 cut(s) 992, 1467
BciVI GTATCC 1 cut(s) 1537
BclI TGATCA 1 cut(s) 807
BcnI CCSGG 1 cut(s) 460
BcoDI GTCTC 8 cut(s) 77, 254, 322, 542, 641, 828, 1254, 1398
BfaI CTAG 3 cut(s) 479, 1695, 1774
BfmI CTRYAG 1 cut(s) 9
BfuI GTATCC 1 cut(s) 1537
BglII AGATCT 1 cut(s) 846
BisI GCNGC 4 cut(s) 396, 947, 1124, 1181
BlnI CCTAGG 1 cut(s) 1694
BlsI GCNGC 4 cut(s) 397, 948, 1125, 1182
Bme1390I CCNGG 3 cut(s) 460, 992, 1467
Bme18I GGWCC 2 cut(s) 73, 1598
BmeRI GACNNNNNGTC 1 cut(s) 1390
BmeT110I CYCGRG 1 cut(s) 1199
BmgBI CACGTC 1 cut(s) 1066
BmgT120I GGNCC 2 cut(s) 73, 1598
BmiI GGNNCC 1 cut(s) 204
BmrFI CCNGG 3 cut(s) 460, 992, 1467
BmrI ACTGGG 1 cut(s) 1495
BmuI ACTGGG 1 cut(s) 1495
BpiI GAAGAC 1 cut(s) 1068
BplI GAGNNNNNCTC 4 cut(s) 95, 127, 572, 604
BpmI CTGGAG 2 cut(s) 631, 742
Bpu10I CCTNAGC 2 cut(s) 305, 965
Bpu14I TTCGAA 1 cut(s) 711
BpuEI CTTGAG 5 cut(s) 122, 464, 748, 1173, 1625
BpuMI CCSGG 1 cut(s) 460
BsaAI YACGTR 1 cut(s) 615
BsaBI GATNNNNATC 2 cut(s) 228, 1047
BsaHI GRCGYC 1 cut(s) 1391
BsaI GGTCTC 1 cut(s) 641
BsaJI CCNNGG 3 cut(s) 198, 990, 1694
BsaWI WCCGGW 1 cut(s) 113
BsaXI ACNNNNNCTCC 4 cut(s) 621, 651, 1251, 1281
Bsc4I CCNNNNNNNGG 2 cut(s) 580, 1023
Bse1I ACTGG 3 cut(s) 1278, 1490, 1681
Bse8I GATNNNNATC 2 cut(s) 228, 1047
BseAI TCCGGA 1 cut(s) 113
BseBI CCWGG 2 cut(s) 992, 1467
BseDI CCNNGG 3 cut(s) 198, 990, 1694
BseGI GGATG 1 cut(s) 881
BseJI GATNNNNATC 2 cut(s) 228, 1047
BseLI CCNNNNNNNGG 2 cut(s) 580, 1023
BseMII CTCAG 6 cut(s) 119, 319, 603, 956, 1394, 1409
BseNI ACTGG 3 cut(s) 1278, 1490, 1681
BsePI GCGCGC 1 cut(s) 360
BseRI GAGGAG 3 cut(s) 857, 913, 1512
BseSI GKGCMC 1 cut(s) 614
BseXI GCAGC 1 cut(s) 933
Bsh1236I CGCG 1 cut(s) 362
Bsh1285I CGRYCG 1 cut(s) 1596
BshFI GGCC 2 cut(s) 503, 904
BshNI GGYRCC 1 cut(s) 202
BsiEI CGRYCG 1 cut(s) 1596
BsiHKAI GWGCWC 2 cut(s) 108, 614
BsiHKCI CYCGRG 1 cut(s) 1199
BsiSI CCGG 2 cut(s) 114, 459
BslFI GGGAC 2 cut(s) 157, 286
BslI CCNNNNNNNGG 2 cut(s) 580, 1023
BsmAI GTCTC 8 cut(s) 77, 254, 322, 542, 641, 828, 1254, 1398
BsmBI CGTCTC 4 cut(s) 77, 828, 1254, 1398
BsmFI GGGAC 2 cut(s) 157, 286
BsnI GGCC 2 cut(s) 503, 904
Bso31I GGTCTC 1 cut(s) 641
BsoBI CYCGRG 1 cut(s) 1199
Bsp119I TTCGAA 1 cut(s) 711
Bsp1286I GDGCHC 2 cut(s) 108, 614
Bsp13I TCCGGA 1 cut(s) 113
Bsp143I GATC 8 cut(s) 229, 404, 807, 846, 1042, 1366, 1409, 1593
BspACI CCGC 8 cut(s) 17, 395, 981, 1123, 1181, 1601, 1646, 1668
BspANI GGCC 2 cut(s) 503, 904
BspCNI CTCAG 6 cut(s) 120, 318, 602, 957, 1395, 1408
BspEI TCCGGA 1 cut(s) 113
BspFNI CGCG 1 cut(s) 362
BspHI TCATGA 1 cut(s) 930
BspLI GGNNCC 1 cut(s) 204
BspPI GGATC 4 cut(s) 224, 1037, 1374, 1404
BspT104I TTCGAA 1 cut(s) 711
BspT107I GGYRCC 1 cut(s) 202
BspTNI GGTCTC 1 cut(s) 641
BsrBI CCGCTC 1 cut(s) 1183
BsrI ACTGG 3 cut(s) 1278, 1490, 1681
BssECI CCNNGG 3 cut(s) 198, 990, 1694
BssHII GCGCGC 1 cut(s) 360
BssMI GATC 8 cut(s) 229, 404, 807, 846, 1042, 1366, 1409, 1593
BssNI GRCGYC 1 cut(s) 1391
BssSI CACGAG 1 cut(s) 1416
BssT1I CCWWGG 2 cut(s) 198, 1694
Bst2BI CACGAG 1 cut(s) 1416
Bst2UI CCWGG 2 cut(s) 992, 1467
Bst4CI ACNGT 5 cut(s) 10, 148, 295, 493, 1154
Bst6I CTCTTC 2 cut(s) 378, 522
BstACI GRCGYC 1 cut(s) 1391
BstBAI YACGTR 1 cut(s) 615
BstBI TTCGAA 1 cut(s) 711
BstC8I GCNNGC 4 cut(s) 67, 362, 523, 979
BstF5I GGATG 1 cut(s) 881
BstFNI CGCG 1 cut(s) 362
BstHHI GCGC 4 cut(s) 362, 364, 1001, 1584
BstKTI GATC 8 cut(s) 232, 407, 810, 849, 1045, 1369, 1412, 1596
BstMAI GTCTC 8 cut(s) 77, 254, 322, 542, 641, 828, 1254, 1398
BstMBI GATC 8 cut(s) 229, 404, 807, 846, 1042, 1366, 1409, 1593
BstMCI CGRYCG 1 cut(s) 1596
BstMWI GCNNNNNNNGC 1 cut(s) 800
BstNI CCWGG 2 cut(s) 992, 1467
BstNSI RCATGY 2 cut(s) 53, 221
BstSCI CCNGG 3 cut(s) 458, 990, 1465
BstSFI CTRYAG 1 cut(s) 9
BstSLI GKGCMC 1 cut(s) 614
BstUI CGCG 1 cut(s) 362
BstV1I GCAGC 1 cut(s) 933
BstV2I GAAGAC 1 cut(s) 1068
BstX2I RGATCY 3 cut(s) 229, 846, 1366
BstYI RGATCY 3 cut(s) 229, 846, 1366
BsuI GTATCC 1 cut(s) 1537
BsuRI GGCC 2 cut(s) 503, 904
BtrI CACGTC 1 cut(s) 1066
BtsCI GGATG 1 cut(s) 881
BtsIMutI CAGTG 2 cut(s) 291, 614
Cac8I GCNNGC 4 cut(s) 67, 362, 523, 979
CaiI CAGNNNCTG 1 cut(s) 1402
CciI TCATGA 1 cut(s) 930
CfoI GCGC 4 cut(s) 362, 364, 1001, 1584
Cfr13I GGNCC 2 cut(s) 73, 1598
CpoI CGGWCCG 1 cut(s) 1598
CseI GACGC 3 cut(s) 94, 484, 1380
Csp6I GTAC 3 cut(s) 952, 1249, 1701
CspI CGGWCCG 1 cut(s) 1598
CviAII CATG 5 cut(s) 23, 50, 218, 931, 1585
CviQI GTAC 3 cut(s) 952, 1249, 1701
DpnI GATC 8 cut(s) 231, 406, 809, 848, 1044, 1368, 1411, 1595
DpnII GATC 8 cut(s) 229, 404, 807, 846, 1042, 1366, 1409, 1593
DraI TTTAAA 1 cut(s) 535
DriI GACNNNNNGTC 1 cut(s) 1390
EaeI YGGCCR 2 cut(s) 501, 902
Eam1104I CTCTTC 2 cut(s) 378, 522
Eam1105I GACNNNNNGTC 1 cut(s) 1390
EarI CTCTTC 2 cut(s) 378, 522
EciI GGCGGA 1 cut(s) 1661
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 2 cut(s) 198, 1694
Eco24I GRGCYC 1 cut(s) 108
Eco31I GGTCTC 1 cut(s) 641
Eco47I GGWCC 2 cut(s) 73, 1598
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 3 cut(s) 359, 1355, 1443
Eco88I CYCGRG 1 cut(s) 1199
EcoICRI GAGCTC 1 cut(s) 106
EcoRII CCWGG 2 cut(s) 990, 1465
EcoT14I CCWWGG 2 cut(s) 198, 1694
EcoT22I ATGCAT 1 cut(s) 1148
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 2 cut(s) 198, 1694
Esp3I CGTCTC 4 cut(s) 77, 828, 1254, 1398
FaeI CATG 5 cut(s) 26, 53, 221, 934, 1588
FalI AAGNNNNNCTT 2 cut(s) 741, 773
FaqI GGGAC 2 cut(s) 157, 286
FatI CATG 5 cut(s) 22, 49, 217, 930, 1584
FauI CCCGC 1 cut(s) 10
FauNDI CATATG 1 cut(s) 1142
FbaI TGATCA 1 cut(s) 807
Fnu4HI GCNGC 4 cut(s) 396, 947, 1124, 1181
FokI GGATG 1 cut(s) 888
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 4 cut(s) 396, 947, 1124, 1181
FspBI CTAG 3 cut(s) 479, 1695, 1774
GlaI GCGC 4 cut(s) 361, 363, 1000, 1583
GluI GCNGC 4 cut(s) 396, 947, 1124, 1181
GsuI CTGGAG 2 cut(s) 631, 742
HaeIII GGCC 2 cut(s) 503, 904
HapII CCGG 2 cut(s) 114, 459
HgaI GACGC 3 cut(s) 94, 484, 1380
HhaI GCGC 4 cut(s) 362, 364, 1001, 1584
Hin1I GRCGYC 1 cut(s) 1391
Hin1II CATG 5 cut(s) 26, 53, 221, 934, 1588
Hin6I GCGC 4 cut(s) 360, 362, 999, 1582
HinP1I GCGC 4 cut(s) 360, 362, 999, 1582
HincII GTYRAC 3 cut(s) 1014, 1384, 1432
HindII GTYRAC 3 cut(s) 1014, 1384, 1432
HindIII AAGCTT 2 cut(s) 696, 896
HinfI GANTC 7 cut(s) 97, 439, 768, 1081, 1129, 1690, 1736
HpaII CCGG 2 cut(s) 114, 459
HphI GGTGA 3 cut(s) 608, 1006, 1166
Hpy166II GTNNAC 8 cut(s) 348, 612, 1014, 1036, 1384, 1432, 1558, 1701
Hpy8I GTNNAC 8 cut(s) 348, 612, 1014, 1036, 1384, 1432, 1558, 1701
HpyAV CCTTC 7 cut(s) 87, 317, 422, 457, 571, 743, 1357
HpyCH4III ACNGT 5 cut(s) 10, 148, 295, 493, 1154
HpyCH4IV ACGT 6 cut(s) 614, 1038, 1065, 1263, 1452, 1631
HpyCH4V TGCA 6 cut(s) 69, 251, 612, 911, 1146, 1533
HpyF10VI GCNNNNNNNGC 1 cut(s) 800
HpySE526I ACGT 6 cut(s) 614, 1038, 1065, 1263, 1452, 1631
Hsp92I GRCGYC 1 cut(s) 1391
Hsp92II CATG 5 cut(s) 26, 53, 221, 934, 1588
HspAI GCGC 4 cut(s) 360, 362, 999, 1582
Kpn2I TCCGGA 1 cut(s) 113
Ksp22I TGATCA 1 cut(s) 807
Kzo9I GATC 8 cut(s) 229, 404, 807, 846, 1042, 1366, 1409, 1593
Lsp1109I GCAGC 1 cut(s) 933
MaeI CTAG 3 cut(s) 479, 1695, 1774
MaeII ACGT 6 cut(s) 614, 1038, 1065, 1263, 1452, 1631
MaeIII GTNAC 4 cut(s) 1094, 1154, 1273, 1469
MalI GATC 8 cut(s) 231, 406, 809, 848, 1044, 1368, 1411, 1595
MbiI CCGCTC 1 cut(s) 1183
MboI GATC 8 cut(s) 229, 404, 807, 846, 1042, 1366, 1409, 1593
MboII GAAGA 9 cut(s) 365, 539, 725, 1043, 1073, 1178, 1332, 1361, 1535
MflI RGATCY 3 cut(s) 229, 846, 1366
MhlI GDGCHC 2 cut(s) 108, 614
MlsI TGGCCA 1 cut(s) 904
MluCI AATT 4 cut(s) 246, 467, 914, 1708
MluNI TGGCCA 1 cut(s) 904
MlyI GAGTC 1 cut(s) 1684
MmeI TCCRAC 1 cut(s) 36
Mox20I TGGCCA 1 cut(s) 904
Mph1103I ATGCAT 1 cut(s) 1148
MroI TCCGGA 1 cut(s) 113
MroXI GAANNNNTTC 1 cut(s) 1218
MscI TGGCCA 1 cut(s) 904
MseI TTAA 5 cut(s) 471, 534, 1334, 1686, 1731
MslI CAYNNNNRTG 2 cut(s) 27, 516
Msp20I TGGCCA 1 cut(s) 904
MspA1I CMGCKG 1 cut(s) 395
MspI CCGG 2 cut(s) 114, 459
MspR9I CCNGG 3 cut(s) 460, 992, 1467
MvaI CCWGG 2 cut(s) 992, 1467
MvnI CGCG 1 cut(s) 362
MwoI GCNNNNNNNGC 1 cut(s) 800
NciI CCSGG 1 cut(s) 460
NdeI CATATG 1 cut(s) 1142
NdeII GATC 8 cut(s) 229, 404, 807, 846, 1042, 1366, 1409, 1593
NlaIII CATG 5 cut(s) 26, 53, 221, 934, 1588
NlaIV GGNNCC 1 cut(s) 204
NmuCI GTSAC 3 cut(s) 1154, 1273, 1469
NsiI ATGCAT 1 cut(s) 1148
NspI RCATGY 2 cut(s) 53, 221
NspV TTCGAA 1 cut(s) 711
PagI TCATGA 1 cut(s) 930
PauI GCGCGC 1 cut(s) 360
PcsI WCGNNNNNNNCGW 1 cut(s) 1014
PdmI GAANNNNTTC 1 cut(s) 1218
PfeI GAWTC 6 cut(s) 97, 439, 768, 1081, 1129, 1736
PflFI GACNNNGTC 1 cut(s) 1160
PkrI GCNGC 4 cut(s) 397, 948, 1125, 1182
Ple19I CGATCG 1 cut(s) 1596
PleI GAGTC 1 cut(s) 1684
PpsI GAGTC 1 cut(s) 1684
Ppu21I YACGTR 1 cut(s) 615
Psp124BI GAGCTC 1 cut(s) 108
Psp1406I AACGTT 2 cut(s) 1038, 1631
Psp6I CCWGG 2 cut(s) 990, 1465
PspGI CCWGG 2 cut(s) 990, 1465
PspN4I GGNNCC 1 cut(s) 204
PspPI GGNCC 2 cut(s) 73, 1598
PstNI CAGNNNCTG 1 cut(s) 1402
PsuI RGATCY 3 cut(s) 229, 846, 1366
PsyI GACNNNGTC 1 cut(s) 1160
PteI GCGCGC 1 cut(s) 360
PvuI CGATCG 1 cut(s) 1596
RsaI GTAC 3 cut(s) 953, 1250, 1702
RsaNI GTAC 3 cut(s) 952, 1249, 1701
RseI CAYNNNNRTG 2 cut(s) 27, 516
Rsr2I CGGWCCG 1 cut(s) 1598
RsrII CGGWCCG 1 cut(s) 1598
SacI GAGCTC 1 cut(s) 108
SaqAI TTAA 5 cut(s) 471, 534, 1334, 1686, 1731
SatI GCNGC 4 cut(s) 396, 947, 1124, 1181
Sau3AI GATC 8 cut(s) 229, 404, 807, 846, 1042, 1366, 1409, 1593
Sau96I GGNCC 2 cut(s) 73, 1598
SchI GAGTC 1 cut(s) 1684
ScrFI CCNGG 3 cut(s) 460, 992, 1467
SduI GDGCHC 2 cut(s) 108, 614
SfcI CTRYAG 1 cut(s) 9
SfuI TTCGAA 1 cut(s) 711
SinI GGWCC 2 cut(s) 73, 1598
SmiMI CAYNNNNRTG 2 cut(s) 27, 516
SmlI CTYRAG 5 cut(s) 101, 443, 763, 1188, 1604
SmoI CTYRAG 5 cut(s) 101, 443, 763, 1188, 1604
Sse9I AATT 4 cut(s) 246, 467, 914, 1708
SsiI CCGC 8 cut(s) 17, 395, 981, 1123, 1181, 1601, 1646, 1668
SspMI CTAG 3 cut(s) 479, 1695, 1774
SstI GAGCTC 1 cut(s) 108
StyD4I CCNGG 3 cut(s) 458, 990, 1465
StyI CCWWGG 2 cut(s) 198, 1694
TaaI ACNGT 5 cut(s) 10, 148, 295, 493, 1154
TaiI ACGT 6 cut(s) 617, 1041, 1068, 1266, 1455, 1634
TaqI TCGA 7 cut(s) 45, 711, 840, 1101, 1164, 1577, 1592
TaqII GACCGA 1 cut(s) 593
TasI AATT 4 cut(s) 246, 467, 914, 1708
TauI GCSGC 3 cut(s) 398, 1126, 1183
TfiI GAWTC 6 cut(s) 97, 439, 768, 1081, 1129, 1736
Tru1I TTAA 5 cut(s) 471, 534, 1334, 1686, 1731
Tru9I TTAA 5 cut(s) 471, 534, 1334, 1686, 1731
TscAI CASTG 2 cut(s) 298, 614
TseFI GTSAC 3 cut(s) 1154, 1273, 1469
TseI GCWGC 1 cut(s) 946
Tsp45I GTSAC 3 cut(s) 1154, 1273, 1469
TspDTI ATGAA 3 cut(s) 1227, 1300, 1601
TspGWI ACGGA 1 cut(s) 333
TspRI CASTG 2 cut(s) 298, 614
Tth111I GACNNNGTC 1 cut(s) 1160
VneI GTGCAC 1 cut(s) 610
VpaK11BI GGWCC 2 cut(s) 73, 1598
XapI RAATTY 2 cut(s) 467, 914
XceI RCATGY 2 cut(s) 53, 221
XmaJI CCTAGG 1 cut(s) 1694
XmnI GAANNNNTTC 1 cut(s) 1218
XspI CTAG 3 cut(s) 479, 1695, 1774
Zsp2I ATGCAT 1 cut(s) 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.