Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0011188

Physical Location & Seq

Genomic Coordinates Forward (+)

1272067 .. 1275160

Gene Structure 3094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g01640.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGAACCATCTGTGTGTGGAGAAGACGATATCGTTAGGTGGTTTGAGGACGTGACGGAGAAGGCAGGTTCAGTTCAAACGCAGACGCTCCGGCGGATACTTGAACTGAATTTCGAAGTGGAATATCTCAAGAAATGGTTGGGGGACATCGAAATCCAAGAGGTAGATGCGTGTCTGTTGGAATCACTCTACACTTCTTTGGTGCCTCTTGCTTCACATGCAGATTTAGAGCCTTACATTCATAGAATTGCAAATGGGGAATCAGGCCCCATTCTCACAAAACAACCTATAACTACTCTCTCCTTAAGTTCTGGAACCACAGAAGGAAGACAAAAGTACGTACCGTTTATGCGCCACAGTTCACAGACCACTCTTCAAATTTTTAGGCTGGCTGCAGCTTATAGATCAAGGGTTTATCCGACGAGAGGAGGAGGGAGGATCTTGGAATTCATATACAGCAGTAGACAATTCAAAACGAAGGGAGGATTAACAGCAGGAACAGCCACAACTCACTACTACGCCAGCCCGGAATTCAAAATTAAACAAGAAAAAACCAAGTCATTCACTTGCAGCCCCGAAGAGGTCATTTCGAGCGGTGACAGCAAGCAATCAACATATTGTCACCTTCTCCTCGGCCTCTTCTTCTCCGAACAAGTAGAGTTCATAACCTCCACCTTTGCGTACAGCATAGTGCAGTCCTTTATCGCCTTCGAAGAGCTCTGGAAGGAGTTGTGCATTGACATACGAGACGGCACTCTTAGTAAACGAATCAATCTCCCCAAAGTGCGAAAAGCGGTCTTGGATATCATCTCCCCAAACCCAATTCTGGCTTCGAAAATTGAAGCTTGTTGCGAGGAGTTGGAGGATTTGGATTGGTTTGGTCTGATTCCCAAGCTTTGGCCCAACGCCAAGTATGTGTACTCTATAATGACAGGATCGATCCAGCCGTATTTGAAAAAACTCCGGCGATATGCAGCGGAAGTGCCGCTAGTAAGTGCAGAATATGGATCAACTGAGAGTTGGATTGGAGTGAATGTGGATCCCTGTTTGCCTCCGGAGGAGGTGACATTTGCAGTGGTGCCAACTTTTTCCTACTTTGAGTTCATACCACTTCATAGACAGAAGCAAGATTACAATTTGGTCATTGATGATTTCATAGAAGATAAACCAGTACCAATGTCACAAGTCAAGGTTGGACAAGAGTATGAGATTGTCCTCACTACTTTCACTGGACTTTATAGGTACAGGCTAGGAGATGTGGTGGAAGTGGCAGGTTTCCACAATGGAACTCCAAAATTGAACTTTATATGCAGGAGAAAGCTTATATTGACAGTAAACATAGACAAAAACACTGAAAAGGACCTTCAAATGGTGGTGGAGAGAGGCTCTCAACTATTGAGCAAGTCCAAAGCAGAACTGATTGACTTCACAAGCCATGCTGATGTCCTGACCCAACCAGGCCACTACATAATATACTGGGAGATCAAAGGAGAAGTTGAAGAGAGGGTTCTTGGTGAATGTTGCAGAGAAATGGATGCATCTTTTGTGGATCATGGTTACGTTGTCTCGAGGCGAAGTAATTCGATTGGACCTCTAGAGCTTCGGATTGTGGAGAAGGGAACGTTCAAGAAAATTTTGGAATATTTCATAGGAAATGGATCGGCATTGAGCCAATTCAAGACCCCTAGGTGCACTAGCAATAAGGTGCTCTTGAGCATTCTCAATTTATGCACCACTAAAAGGGTTTACAGCACTGCATATGCTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

GH3

Protein Analysis

590

Amino Acids

66.85

Weight (kDa)

6.04

Isoelectric Point (pI)

49.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03400 AT4G03400
fragaria_vesca	FvH4_6g44990 FvH4_6g44990
malus_domestica	MD17G1081000.v1.1
prunus_persica	Prupe.3G233900_v2.0.a1
pyrus_communis	pycom09g01640
rosa_chinensis	RchiOBHm_Chr2g0162261
rosa_laevigata	RLG00000021331
rosa_multiflora	Rmu_sc0004020.1_g000022
rosa_roxburghii	Rroxscaffold_2G00088210
rosa_rugosa	Rorug02G0495700 Rorug02G0495800 Rorug02G0495900 Rorug02G0496000
rosa_samantha	Rh2AG562000 Rh2BG575100 Rh2CG545300 Rh2DG585000
rosa_wichuraiana	Rw2G046540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	56, 1262
AccB1I	GGYRCC	2 cut(s)	202, 1078
AccB7I	CCANNNNNTGG	1 cut(s)	897
AccBSI	CCGCTC	1 cut(s)	594
AccI	GTMKAC	1 cut(s)	463
AccIII	TCCGGA	1 cut(s)	1054
AciI	CCGC	5 cut(s)	94, 594, 794, 977, 986
AclI	AACGTT	1 cut(s)	1622
AclWI	GGATC	8 cut(s)	446, 934, 943, 1015, 1034, 1047, 1557, 1666
AcsI	RAATTY	5 cut(s)	109, 378, 446, 530, 1632
AfaI	GTAC	6 cut(s)	338, 342, 683, 920, 1173, 1244
AfiI	CCNNNNNNNGG	6 cut(s)	425, 580, 826, 897, 1369, 1740
AflII	CTTAAG	1 cut(s)	304
AjiI	CACGTC	1 cut(s)	52
AjnI	CCWGG	1 cut(s)	1456
AjuI	GAANNNNNNNTTGG	2 cut(s)	814, 846
AluBI	AGCT	6 cut(s)	398, 718, 845, 895, 1321, 1600
AluI	AGCT	6 cut(s)	398, 718, 845, 895, 1321, 1600
Alw21I	GWGCWC	3 cut(s)	720, 1694, 1710
Alw26I	GTCTC	2 cut(s)	741, 1570
Alw44I	GTGCAC	1 cut(s)	1690
AlwI	GGATC	8 cut(s)	446, 934, 943, 1015, 1034, 1047, 1557, 1666
Ama87I	CYCGRG	1 cut(s)	1567
Aor13HI	TCCGGA	1 cut(s)	1054
AoxI	GGCC	4 cut(s)	265, 634, 899, 1459
ApaLI	GTGCAC	1 cut(s)	1690
ApeKI	GCWGC	4 cut(s)	392, 395, 570, 974
ApoI	RAATTY	5 cut(s)	109, 378, 446, 530, 1632
Asp700I	GAANNNNTTC	1 cut(s)	1579
AspA2I	CCTAGG	1 cut(s)	1685
AspLEI	GCGC	1 cut(s)	354
AspS9I	GGNCC	4 cut(s)	266, 900, 1360, 1589
AsuC2I	CCSGG	1 cut(s)	527
AsuHPI	GGTGA	4 cut(s)	608, 614, 1075, 1526
AsuII	TTCGAA	3 cut(s)	114, 711, 833
AvaI	CYCGRG	1 cut(s)	1567
AvaII	GGWCC	2 cut(s)	1360, 1589
AvrII	CCTAGG	1 cut(s)	1685
BaeGI	GKGCMC	1 cut(s)	1694
BamHI	GGATCC	1 cut(s)	1039
BanI	GGYRCC	2 cut(s)	202, 1078
BanII	GRGCYC	1 cut(s)	720
BarI	GAAGNNNNNNTAC	2 cut(s)	1115, 1147
BbsI	GAAGAC	2 cut(s)	30, 334
Bbv12I	GWGCWC	3 cut(s)	720, 1694, 1710
BbvI	GCAGC	4 cut(s)	379, 407, 582, 986
BccI	CCATC	1 cut(s)	16
BceAI	ACGGC	2 cut(s)	766, 931
BciT130I	CCWGG	1 cut(s)	1458
BciVI	GTATCC	1 cut(s)	90
BcnI	CCSGG	1 cut(s)	527
BcoDI	GTCTC	2 cut(s)	741, 1570
BfaI	CTAG	5 cut(s)	989, 1250, 1595, 1686, 1695
BfmI	CTRYAG	1 cut(s)	393
BfrI	CTTAAG	1 cut(s)	304
BfuAI	ACCTGC	2 cut(s)	56, 1262
BfuI	GTATCC	1 cut(s)	90
BisI	GCNGC	5 cut(s)	393, 396, 571, 975, 986
BlnI	CCTAGG	1 cut(s)	1685
BlsI	GCNGC	5 cut(s)	394, 397, 572, 976, 987
Bme1390I	CCNGG	2 cut(s)	527, 1458
Bme18I	GGWCC	2 cut(s)	1360, 1589
BmeT110I	CYCGRG	1 cut(s)	1567
BmgBI	CACGTC	1 cut(s)	52
BmgT120I	GGNCC	4 cut(s)	266, 900, 1360, 1589
BmiI	GGNNCC	6 cut(s)	6, 204, 268, 316, 1041, 1080
BmrFI	CCNGG	2 cut(s)	527, 1458
BmrI	ACTGGG	1 cut(s)	1486
BmsI	GCATC	3 cut(s)	157, 1525, 1547
BmuI	ACTGGG	1 cut(s)	1486
BpiI	GAAGAC	2 cut(s)	30, 334
BplI	GAGNNNNNCTC	4 cut(s)	1370, 1402, 1372, 1404
Bpu14I	TTCGAA	3 cut(s)	114, 711, 833
BpuEI	CTTGAG	2 cut(s)	113, 1732
BpuMI	CCSGG	1 cut(s)	527
Bsa29I	ATCGAT	1 cut(s)	938
BsaAI	YACGTR	1 cut(s)	340
BsaJI	CCNNGG	2 cut(s)	631, 1685
BsaWI	WCCGGW	1 cut(s)	1054
BsaXI	ACNNNNNCTCC	4 cut(s)	1020, 1050, 1245, 1275
Bsc4I	CCNNNNNNNGG	6 cut(s)	425, 580, 826, 897, 1369, 1740
Bse1I	ACTGG	3 cut(s)	1169, 1234, 1481
BseAI	TCCGGA	1 cut(s)	1054
BseBI	CCWGG	1 cut(s)	1458
BseCI	ATCGAT	1 cut(s)	938
BseDI	CCNNGG	2 cut(s)	631, 1685
BseGI	GGATG	1 cut(s)	1540
BseLI	CCNNNNNNNGG	6 cut(s)	425, 580, 826, 897, 1369, 1740
BseMII	CTCAG	1 cut(s)	1005
BseNI	ACTGG	3 cut(s)	1169, 1234, 1481
BseRI	GAGGAG	5 cut(s)	441, 444, 620, 869, 1073
BseSI	GKGCMC	1 cut(s)	1694
BseXI	GCAGC	4 cut(s)	379, 407, 582, 986
BsgI	GTGCAG	2 cut(s)	713, 1017
BshFI	GGCC	4 cut(s)	267, 636, 901, 1461
BshNI	GGYRCC	2 cut(s)	202, 1078
BshVI	ATCGAT	1 cut(s)	938
BsiHKAI	GWGCWC	3 cut(s)	720, 1694, 1710
BsiHKCI	CYCGRG	1 cut(s)	1567
BsiSI	CCGG	4 cut(s)	91, 527, 964, 1055
BslFI	GGGAC	1 cut(s)	158
BslI	CCNNNNNNNGG	6 cut(s)	425, 580, 826, 897, 1369, 1740
BsmAI	GTCTC	2 cut(s)	741, 1570
BsmBI	CGTCTC	1 cut(s)	741
BsmFI	GGGAC	1 cut(s)	158
BsmI	GAATGC	1 cut(s)	1716
BsnI	GGCC	4 cut(s)	267, 636, 901, 1461
BsoBI	CYCGRG	1 cut(s)	1567
Bsp119I	TTCGAA	3 cut(s)	114, 711, 833
Bsp1286I	GDGCHC	3 cut(s)	720, 1694, 1710
Bsp13I	TCCGGA	1 cut(s)	1054
Bsp143I	GATC	9 cut(s)	404, 438, 935, 939, 1007, 1039, 1482, 1549, 1658
BspACI	CCGC	5 cut(s)	94, 594, 794, 977, 986
BspANI	GGCC	4 cut(s)	267, 636, 901, 1461
BspCNI	CTCAG	1 cut(s)	1006
BspDI	ATCGAT	1 cut(s)	938
BspEI	TCCGGA	1 cut(s)	1054
BspLI	GGNNCC	6 cut(s)	6, 204, 268, 316, 1041, 1080
BspMAI	CTGCAG	1 cut(s)	397
BspMI	ACCTGC	2 cut(s)	56, 1262
BspPI	GGATC	8 cut(s)	446, 934, 943, 1015, 1034, 1047, 1557, 1666
BspQI	GCTCTTC	1 cut(s)	708
BspT104I	TTCGAA	3 cut(s)	114, 711, 833
BspT107I	GGYRCC	2 cut(s)	202, 1078
BspTI	CTTAAG	1 cut(s)	304
BsrBI	CCGCTC	1 cut(s)	594
BsrI	ACTGG	3 cut(s)	1169, 1234, 1481
BssECI	CCNNGG	2 cut(s)	631, 1685
BssMI	GATC	9 cut(s)	404, 438, 935, 939, 1007, 1039, 1482, 1549, 1658
BssT1I	CCWWGG	1 cut(s)	1685
Bst2UI	CCWGG	1 cut(s)	1458
Bst4CI	ACNGT	3 cut(s)	345, 359, 1333
Bst6I	CTCTTC	5 cut(s)	378, 573, 644, 708, 1494
BstAFI	CTTAAG	1 cut(s)	304
BstBAI	YACGTR	1 cut(s)	340
BstBI	TTCGAA	3 cut(s)	114, 711, 833
BstC8I	GCNNGC	3 cut(s)	390, 523, 605
BstDEI	CTNAG	2 cut(s)	758, 1014
BstF5I	GGATG	1 cut(s)	1540
BstHHI	GCGC	1 cut(s)	354
BstKTI	GATC	9 cut(s)	407, 441, 938, 942, 1010, 1042, 1485, 1552, 1661
BstMAI	GTCTC	2 cut(s)	741, 1570
BstMBI	GATC	9 cut(s)	404, 438, 935, 939, 1007, 1039, 1482, 1549, 1658
BstMWI	GCNNNNNNNGC	3 cut(s)	218, 500, 600
BstNI	CCWGG	1 cut(s)	1458
BstNSI	RCATGY	1 cut(s)	221
BstSCI	CCNGG	2 cut(s)	525, 1456
BstSFI	CTRYAG	1 cut(s)	393
BstSLI	GKGCMC	1 cut(s)	1694
BstSNI	TACGTA	1 cut(s)	340
BstV1I	GCAGC	4 cut(s)	379, 407, 582, 986
BstV2I	GAAGAC	2 cut(s)	30, 334
BstX2I	RGATCY	2 cut(s)	438, 1039
BstYI	RGATCY	2 cut(s)	438, 1039
Bsu15I	ATCGAT	1 cut(s)	938
BsuI	GTATCC	1 cut(s)	90
BsuRI	GGCC	4 cut(s)	267, 636, 901, 1461
BsuTUI	ATCGAT	1 cut(s)	938
BtrI	CACGTC	1 cut(s)	52
BtsCI	GGATG	1 cut(s)	1540
BtsI	GCAGTG	2 cut(s)	1080, 1752
BtsIMutI	CAGTG	4 cut(s)	1080, 1227, 1350, 1752
BveI	ACCTGC	2 cut(s)	56, 1262
Cac8I	GCNNGC	3 cut(s)	390, 523, 605
CfoI	GCGC	1 cut(s)	354
Cfr13I	GGNCC	4 cut(s)	266, 900, 1360, 1589
ClaI	ATCGAT	1 cut(s)	938
CseI	GACGC	1 cut(s)	94
Csp6I	GTAC	6 cut(s)	337, 341, 682, 919, 1172, 1243
CviAII	CATG	3 cut(s)	218, 1436, 1553
CviQI	GTAC	6 cut(s)	337, 341, 682, 919, 1172, 1243
DdeI	CTNAG	2 cut(s)	758, 1014
DpnI	GATC	9 cut(s)	406, 440, 937, 941, 1009, 1041, 1484, 1551, 1660
DpnII	GATC	9 cut(s)	404, 438, 935, 939, 1007, 1039, 1482, 1549, 1658
Eam1104I	CTCTTC	5 cut(s)	378, 573, 644, 708, 1494
EarI	CTCTTC	5 cut(s)	378, 573, 644, 708, 1494
EciI	GGCGGA	1 cut(s)	109
Ecl136II	GAGCTC	1 cut(s)	718
Eco105I	TACGTA	1 cut(s)	340
Eco130I	CCWWGG	1 cut(s)	1685
Eco24I	GRGCYC	1 cut(s)	720
Eco32I	GATATC	2 cut(s)	31, 805
Eco47I	GGWCC	2 cut(s)	1360, 1589
Eco53kI	GAGCTC	1 cut(s)	718
Eco88I	CYCGRG	1 cut(s)	1567
EcoICRI	GAGCTC	1 cut(s)	718
EcoO109I	RGGNCCY	2 cut(s)	266, 1360
EcoRI	GAATTC	2 cut(s)	446, 530
EcoRII	CCWGG	1 cut(s)	1456
EcoRV	GATATC	2 cut(s)	31, 805
EcoT14I	CCWWGG	1 cut(s)	1685
EcoT22I	ATGCAT	1 cut(s)	1540
EcoT38I	GRGCYC	1 cut(s)	720
ErhI	CCWWGG	1 cut(s)	1685
Esp3I	CGTCTC	1 cut(s)	741
FaeI	CATG	3 cut(s)	221, 1439, 1556
FalI	AAGNNNNNCTT	2 cut(s)	1694, 1726
FaqI	GGGAC	1 cut(s)	158
FatI	CATG	3 cut(s)	217, 1435, 1552
FauNDI	CATATG	1 cut(s)	1759
FblI	GTMKAC	1 cut(s)	463
Fnu4HI	GCNGC	5 cut(s)	393, 396, 571, 975, 986
FokI	GGATG	1 cut(s)	1547
FriOI	GRGCYC	1 cut(s)	720
Fsp4HI	GCNGC	5 cut(s)	393, 396, 571, 975, 986
FspBI	CTAG	5 cut(s)	989, 1250, 1595, 1686, 1695
GlaI	GCGC	1 cut(s)	353
GluI	GCNGC	5 cut(s)	393, 396, 571, 975, 986
HaeIII	GGCC	4 cut(s)	267, 636, 901, 1461
HapII	CCGG	4 cut(s)	91, 527, 964, 1055
HgaI	GACGC	1 cut(s)	94
HhaI	GCGC	1 cut(s)	354
Hin1II	CATG	3 cut(s)	221, 1439, 1556
Hin6I	GCGC	1 cut(s)	352
HinP1I	GCGC	1 cut(s)	352
HindIII	AAGCTT	3 cut(s)	843, 893, 1319
HinfI	GANTC	4 cut(s)	182, 260, 768, 886
HpaII	CCGG	4 cut(s)	91, 527, 964, 1055
HphI	GGTGA	4 cut(s)	608, 614, 1075, 1526
Hpy166II	GTNNAC	7 cut(s)	362, 464, 764, 919, 1336, 1692, 1747
Hpy188I	TCNGA	4 cut(s)	420, 649, 885, 1605
Hpy8I	GTNNAC	7 cut(s)	362, 464, 764, 919, 1336, 1692, 1747
Hpy99I	CGWCG	1 cut(s)	424
HpyAV	CCTTC	8 cut(s)	55, 317, 472, 635, 718, 718, 1373, 1609
HpyCH4III	ACNGT	3 cut(s)	345, 359, 1333
HpyCH4IV	ACGT	4 cut(s)	51, 339, 1560, 1622
HpyF10VI	GCNNNNNNNGC	3 cut(s)	218, 500, 600
HpyF3I	CTNAG	2 cut(s)	758, 1014
HpySE526I	ACGT	4 cut(s)	51, 339, 1560, 1622
Hsp92II	CATG	3 cut(s)	221, 1439, 1556
HspAI	GCGC	1 cut(s)	352
Kpn2I	TCCGGA	1 cut(s)	1054
Kzo9I	GATC	9 cut(s)	404, 438, 935, 939, 1007, 1039, 1482, 1549, 1658
LguI	GCTCTTC	1 cut(s)	708
LmnI	GCTCC	1 cut(s)	93
Lsp1109I	GCAGC	4 cut(s)	379, 407, 582, 986
LweI	GCATC	3 cut(s)	157, 1525, 1547
MaeI	CTAG	5 cut(s)	989, 1250, 1595, 1686, 1695
MaeII	ACGT	4 cut(s)	51, 339, 1560, 1622
MaeIII	GTNAC	6 cut(s)	52, 596, 620, 1063, 1179, 1556
MalI	GATC	9 cut(s)	406, 440, 937, 941, 1009, 1041, 1484, 1551, 1660
MbiI	CCGCTC	1 cut(s)	594
MboI	GATC	9 cut(s)	404, 438, 935, 939, 1007, 1039, 1482, 1549, 1658
MboII	GAAGA	9 cut(s)	35, 339, 365, 590, 631, 634, 725, 1172, 1511
MflI	RGATCY	2 cut(s)	438, 1039
MhlI	GDGCHC	3 cut(s)	720, 1694, 1710
MmeI	TCCRAC	5 cut(s)	159, 443, 840, 1001, 1174
Mph1103I	ATGCAT	1 cut(s)	1540
MroI	TCCGGA	1 cut(s)	1054
MroXI	GAANNNNTTC	1 cut(s)	1579
MseI	TTAA	3 cut(s)	305, 488, 540
MslI	CAYNNNNRTG	2 cut(s)	13, 1440
MspA1I	CMGCKG	1 cut(s)	977
MspCI	CTTAAG	1 cut(s)	304
MspI	CCGG	4 cut(s)	91, 527, 964, 1055
MspR9I	CCNGG	2 cut(s)	527, 1458
Mva1269I	GAATGC	1 cut(s)	1716
MvaI	CCWGG	1 cut(s)	1458
MwoI	GCNNNNNNNGC	3 cut(s)	218, 500, 600
NciI	CCSGG	1 cut(s)	527
NdeI	CATATG	1 cut(s)	1759
NdeII	GATC	9 cut(s)	404, 438, 935, 939, 1007, 1039, 1482, 1549, 1658
NlaIII	CATG	3 cut(s)	221, 1439, 1556
NlaIV	GGNNCC	6 cut(s)	6, 204, 268, 316, 1041, 1080
NmeAIII	GCCGAG	1 cut(s)	612
NmuCI	GTSAC	5 cut(s)	52, 596, 620, 1063, 1179
NsiI	ATGCAT	1 cut(s)	1540
NspI	RCATGY	1 cut(s)	221
NspV	TTCGAA	3 cut(s)	114, 711, 833
PaeR7I	CTCGAG	1 cut(s)	1567
PciSI	GCTCTTC	1 cut(s)	708
PcsI	WCGNNNNNNNCGW	1 cut(s)	944
PctI	GAATGC	1 cut(s)	1716
PdmI	GAANNNNTTC	1 cut(s)	1579
PfeI	GAWTC	4 cut(s)	182, 260, 768, 886
PflMI	CCANNNNNTGG	1 cut(s)	897
PkrI	GCNGC	5 cut(s)	394, 397, 572, 976, 987
Ppu21I	YACGTR	1 cut(s)	340
PpuMI	RGGWCCY	1 cut(s)	1360
Psp124BI	GAGCTC	1 cut(s)	720
Psp1406I	AACGTT	1 cut(s)	1622
Psp5II	RGGWCCY	1 cut(s)	1360
Psp6I	CCWGG	1 cut(s)	1456
PspGI	CCWGG	1 cut(s)	1456
PspN4I	GGNNCC	6 cut(s)	6, 204, 268, 316, 1041, 1080
PspPI	GGNCC	4 cut(s)	266, 900, 1360, 1589
PspPPI	RGGWCCY	1 cut(s)	1360
PstI	CTGCAG	1 cut(s)	397
PsuI	RGATCY	2 cut(s)	438, 1039
RsaI	GTAC	6 cut(s)	338, 342, 683, 920, 1173, 1244
RsaNI	GTAC	6 cut(s)	337, 341, 682, 919, 1172, 1243
RseI	CAYNNNNRTG	2 cut(s)	13, 1440
SacI	GAGCTC	1 cut(s)	720
SapI	GCTCTTC	1 cut(s)	708
SaqAI	TTAA	3 cut(s)	305, 488, 540
SatI	GCNGC	5 cut(s)	393, 396, 571, 975, 986
Sau3AI	GATC	9 cut(s)	404, 438, 935, 939, 1007, 1039, 1482, 1549, 1658
Sau96I	GGNCC	4 cut(s)	266, 900, 1360, 1589
ScrFI	CCNGG	2 cut(s)	527, 1458
SduI	GDGCHC	3 cut(s)	720, 1694, 1710
SfaNI	GCATC	3 cut(s)	157, 1525, 1547
SfcI	CTRYAG	1 cut(s)	393
Sfr274I	CTCGAG	1 cut(s)	1567
SfuI	TTCGAA	3 cut(s)	114, 711, 833
SinI	GGWCC	2 cut(s)	1360, 1589
SlaI	CTCGAG	1 cut(s)	1567
SmiMI	CAYNNNNRTG	2 cut(s)	13, 1440
SmlI	CTYRAG	4 cut(s)	128, 304, 1567, 1711
SmoI	CTYRAG	4 cut(s)	128, 304, 1567, 1711
SnaBI	TACGTA	1 cut(s)	340
SsiI	CCGC	5 cut(s)	94, 594, 794, 977, 986
SspI	AATATT	1 cut(s)	1643
SspMI	CTAG	5 cut(s)	989, 1250, 1595, 1686, 1695
SstI	GAGCTC	1 cut(s)	720
StyD4I	CCNGG	2 cut(s)	525, 1456
StyI	CCWWGG	1 cut(s)	1685
TaaI	ACNGT	3 cut(s)	345, 359, 1333
TaiI	ACGT	4 cut(s)	54, 342, 1563, 1625
TaqI	TCGA	8 cut(s)	114, 150, 590, 711, 833, 938, 1568, 1583
TatI	WGTACW	1 cut(s)	918
TauI	GCSGC	1 cut(s)	988
TfiI	GAWTC	4 cut(s)	182, 260, 768, 886
Tru1I	TTAA	3 cut(s)	305, 488, 540
Tru9I	TTAA	3 cut(s)	305, 488, 540
TscAI	CASTG	4 cut(s)	1080, 1234, 1357, 1759
TseFI	GTSAC	5 cut(s)	52, 596, 620, 1063, 1179
TseI	GCWGC	4 cut(s)	392, 395, 570, 974
Tsp45I	GTSAC	5 cut(s)	52, 596, 620, 1063, 1179
TspDTI	ATGAA	7 cut(s)	230, 439, 652, 1093, 1103, 1144, 1636
TspGWI	ACGGA	1 cut(s)	71
TspRI	CASTG	4 cut(s)	1080, 1234, 1357, 1759
Van91I	CCANNNNNTGG	1 cut(s)	897
Vha464I	CTTAAG	1 cut(s)	304
VneI	GTGCAC	1 cut(s)	1690
VpaK11BI	GGWCC	2 cut(s)	1360, 1589
XapI	RAATTY	5 cut(s)	109, 378, 446, 530, 1632
XbaI	TCTAGA	1 cut(s)	1594
XceI	RCATGY	1 cut(s)	221
XhoI	CTCGAG	1 cut(s)	1567
XmaJI	CCTAGG	1 cut(s)	1685
XmiI	GTMKAC	1 cut(s)	463
XmnI	GAANNNNTTC	1 cut(s)	1579
XspI	CTAG	5 cut(s)	989, 1250, 1595, 1686, 1695
Zsp2I	ATGCAT	1 cut(s)	1540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.