zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G03940 |
| malus_domestica | MD17G1120000.v1.1 |
| pyrus_communis | pycom03g19420 pycom10g09460 pycom10g21720 pycom13g28160 pycom14g05170 |
| rosa_chinensis | RchiOBHm_Chr3g0491631 |
| rosa_wichuraiana | Rw5G011130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 476 |
| AccB1I | GGYRCC | 1 cut(s) | 476 |
| AclWI | GGATC | 1 cut(s) | 665 |
| AcsI | RAATTY | 2 cut(s) | 4, 863 |
| AfaI | GTAC | 2 cut(s) | 99, 478 |
| AgsI | TTSAA | 6 cut(s) | 68, 185, 335, 360, 451, 784 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 573 |
| Alw21I | GWGCWC | 1 cut(s) | 826 |
| Alw26I | GTCTC | 3 cut(s) | 560, 580, 836 |
| AlwI | GGATC | 1 cut(s) | 665 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 274 |
| ApoI | RAATTY | 2 cut(s) | 4, 863 |
| AseI | ATTAAT | 1 cut(s) | 501 |
| Asp718I | GGTACC | 1 cut(s) | 476 |
| AspS9I | GGNCC | 1 cut(s) | 254 |
| AvaII | GGWCC | 1 cut(s) | 254 |
| BanI | GGYRCC | 1 cut(s) | 476 |
| BanII | GRGCYC | 1 cut(s) | 826 |
| Bbv12I | GWGCWC | 1 cut(s) | 826 |
| BccI | CCATC | 4 cut(s) | 11, 753, 804, 841 |
| BcoDI | GTCTC | 3 cut(s) | 560, 580, 836 |
| BfaI | CTAG | 1 cut(s) | 407 |
| BfmI | CTRYAG | 2 cut(s) | 138, 514 |
| Bme18I | GGWCC | 1 cut(s) | 254 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 573 |
| BmgT120I | GGNCC | 1 cut(s) | 254 |
| BmiI | GGNNCC | 1 cut(s) | 478 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 586, 618 |
| Bpu10I | CCTNAGC | 1 cut(s) | 396 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 287, 317 |
| BseGI | GGATG | 1 cut(s) | 306 |
| BseMII | CTCAG | 2 cut(s) | 231, 755 |
| BseRI | GAGGAG | 3 cut(s) | 204, 242, 854 |
| BshNI | GGYRCC | 1 cut(s) | 476 |
| BsiHKAI | GWGCWC | 1 cut(s) | 826 |
| BsiSI | CCGG | 2 cut(s) | 735, 878 |
| BslFI | GGGAC | 1 cut(s) | 333 |
| BsmAI | GTCTC | 3 cut(s) | 560, 580, 836 |
| BsmBI | CGTCTC | 1 cut(s) | 836 |
| BsmFI | GGGAC | 1 cut(s) | 333 |
| Bsp1286I | GDGCHC | 1 cut(s) | 826 |
| Bsp143I | GATC | 2 cut(s) | 283, 657 |
| BspCNI | CTCAG | 2 cut(s) | 232, 756 |
| BspLI | GGNNCC | 1 cut(s) | 478 |
| BspPI | GGATC | 1 cut(s) | 665 |
| BspT107I | GGYRCC | 1 cut(s) | 476 |
| BssMI | GATC | 2 cut(s) | 283, 657 |
| Bst4CI | ACNGT | 2 cut(s) | 76, 276 |
| Bst6I | CTCTTC | 1 cut(s) | 701 |
| BstC8I | GCNNGC | 1 cut(s) | 791 |
| BstDEI | CTNAG | 7 cut(s) | 240, 396, 441, 570, 623, 635, 764 |
| BstF5I | GGATG | 1 cut(s) | 306 |
| BstKTI | GATC | 2 cut(s) | 286, 660 |
| BstMAI | GTCTC | 3 cut(s) | 560, 580, 836 |
| BstMBI | GATC | 2 cut(s) | 283, 657 |
| BstNSI | RCATGY | 1 cut(s) | 107 |
| BstSFI | CTRYAG | 2 cut(s) | 138, 514 |
| BtsCI | GGATG | 1 cut(s) | 306 |
| BtsI | GCAGTG | 1 cut(s) | 905 |
| BtsIMutI | CAGTG | 2 cut(s) | 272, 905 |
| Cac8I | GCNNGC | 1 cut(s) | 791 |
| CaiI | CAGNNNCTG | 1 cut(s) | 274 |
| Cfr13I | GGNCC | 1 cut(s) | 254 |
| Csp6I | GTAC | 2 cut(s) | 98, 477 |
| CviAII | CATG | 2 cut(s) | 104, 806 |
| CviQI | GTAC | 2 cut(s) | 98, 477 |
| DdeI | CTNAG | 7 cut(s) | 240, 396, 441, 570, 623, 635, 764 |
| DpnI | GATC | 2 cut(s) | 285, 659 |
| DpnII | GATC | 2 cut(s) | 283, 657 |
| DriI | GACNNNNNGTC | 1 cut(s) | 573 |
| Eam1104I | CTCTTC | 1 cut(s) | 701 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 573 |
| EarI | CTCTTC | 1 cut(s) | 701 |
| Ecl136II | GAGCTC | 1 cut(s) | 824 |
| Eco24I | GRGCYC | 1 cut(s) | 826 |
| Eco32I | GATATC | 1 cut(s) | 33 |
| Eco47I | GGWCC | 1 cut(s) | 254 |
| Eco53kI | GAGCTC | 1 cut(s) | 824 |
| EcoICRI | GAGCTC | 1 cut(s) | 824 |
| EcoO109I | RGGNCCY | 1 cut(s) | 254 |
| EcoRV | GATATC | 1 cut(s) | 33 |
| EcoT38I | GRGCYC | 1 cut(s) | 826 |
| Esp3I | CGTCTC | 1 cut(s) | 836 |
| FaeI | CATG | 2 cut(s) | 107, 809 |
| FaiI | YATR | 6 cut(s) | 105, 264, 459, 807, 871, 920 |
| FaqI | GGGAC | 1 cut(s) | 333 |
| FatI | CATG | 2 cut(s) | 103, 805 |
| FokI | GGATG | 1 cut(s) | 313 |
| FriOI | GRGCYC | 1 cut(s) | 826 |
| FspBI | CTAG | 1 cut(s) | 407 |
| HapII | CCGG | 2 cut(s) | 735, 878 |
| Hin1II | CATG | 2 cut(s) | 107, 809 |
| HincII | GTYRAC | 1 cut(s) | 382 |
| HindII | GTYRAC | 1 cut(s) | 382 |
| HindIII | AAGCTT | 1 cut(s) | 354 |
| HinfI | GANTC | 9 cut(s) | 173, 197, 212, 321, 364, 528, 601, 760, 891 |
| HpaI | GTTAAC | 1 cut(s) | 382 |
| HpaII | CCGG | 2 cut(s) | 735, 878 |
| Hpy166II | GTNNAC | 2 cut(s) | 98, 382 |
| Hpy188I | TCNGA | 6 cut(s) | 217, 241, 498, 533, 759, 765 |
| Hpy188III | TCNNGA | 6 cut(s) | 47, 65, 428, 703, 811, 914 |
| Hpy8I | GTNNAC | 2 cut(s) | 98, 382 |
| HpyAV | CCTTC | 7 cut(s) | 44, 62, 163, 245, 267, 513, 518 |
| HpyCH4III | ACNGT | 2 cut(s) | 76, 276 |
| HpyF3I | CTNAG | 7 cut(s) | 240, 396, 441, 570, 623, 635, 764 |
| Hsp92II | CATG | 2 cut(s) | 107, 809 |
| KpnI | GGTACC | 1 cut(s) | 480 |
| KspAI | GTTAAC | 1 cut(s) | 382 |
| Kzo9I | GATC | 2 cut(s) | 283, 657 |
| LmnI | GCTCC | 1 cut(s) | 798 |
| LpnPI | CCDG | 8 cut(s) | 21, 281, 353, 413, 544, 748, 880, 891 |
| MaeI | CTAG | 1 cut(s) | 407 |
| MaeIII | GTNAC | 1 cut(s) | 414 |
| MalI | GATC | 2 cut(s) | 285, 659 |
| MboI | GATC | 2 cut(s) | 283, 657 |
| MhlI | GDGCHC | 1 cut(s) | 826 |
| MluCI | AATT | 2 cut(s) | 4, 863 |
| MlyI | GAGTC | 3 cut(s) | 315, 595, 900 |
| MmeI | TCCRAC | 4 cut(s) | 124, 327, 737, 868 |
| MseI | TTAA | 7 cut(s) | 81, 234, 327, 381, 501, 510, 710 |
| MspI | CCGG | 2 cut(s) | 735, 878 |
| NdeII | GATC | 2 cut(s) | 283, 657 |
| NlaIII | CATG | 2 cut(s) | 107, 809 |
| NlaIV | GGNNCC | 1 cut(s) | 478 |
| NspI | RCATGY | 1 cut(s) | 107 |
| PfeI | GAWTC | 6 cut(s) | 173, 197, 212, 364, 528, 760 |
| PleI | GAGTC | 3 cut(s) | 315, 595, 899 |
| PpsI | GAGTC | 3 cut(s) | 315, 595, 899 |
| PpuMI | RGGWCCY | 1 cut(s) | 254 |
| PshBI | ATTAAT | 1 cut(s) | 501 |
| Psp124BI | GAGCTC | 1 cut(s) | 826 |
| Psp5II | RGGWCCY | 1 cut(s) | 254 |
| PspN4I | GGNNCC | 1 cut(s) | 478 |
| PspPI | GGNCC | 1 cut(s) | 254 |
| PspPPI | RGGWCCY | 1 cut(s) | 254 |
| PstNI | CAGNNNCTG | 1 cut(s) | 274 |
| RsaI | GTAC | 2 cut(s) | 99, 478 |
| RsaNI | GTAC | 2 cut(s) | 98, 477 |
| SacI | GAGCTC | 1 cut(s) | 826 |
| SaqAI | TTAA | 7 cut(s) | 81, 234, 327, 381, 501, 510, 710 |
| Sau3AI | GATC | 2 cut(s) | 283, 657 |
| Sau96I | GGNCC | 1 cut(s) | 254 |
| SchI | GAGTC | 3 cut(s) | 315, 595, 900 |
| SduI | GDGCHC | 1 cut(s) | 826 |
| SfcI | CTRYAG | 2 cut(s) | 138, 514 |
| SinI | GGWCC | 1 cut(s) | 254 |
| Sse9I | AATT | 2 cut(s) | 4, 863 |
| SspMI | CTAG | 1 cut(s) | 407 |
| SstI | GAGCTC | 1 cut(s) | 826 |
| TaaI | ACNGT | 2 cut(s) | 76, 276 |
| TaqI | TCGA | 3 cut(s) | 577, 704, 810 |
| TasI | AATT | 2 cut(s) | 4, 863 |
| TfiI | GAWTC | 6 cut(s) | 173, 197, 212, 364, 528, 760 |
| Tru1I | TTAA | 7 cut(s) | 81, 234, 327, 381, 501, 510, 710 |
| Tru9I | TTAA | 7 cut(s) | 81, 234, 327, 381, 501, 510, 710 |
| TscAI | CASTG | 2 cut(s) | 279, 905 |
| TspDTI | ATGAA | 4 cut(s) | 17, 210, 353, 474 |
| TspRI | CASTG | 2 cut(s) | 279, 905 |
| VpaK11BI | GGWCC | 1 cut(s) | 254 |
| VspI | ATTAAT | 1 cut(s) | 501 |
| XapI | RAATTY | 2 cut(s) | 4, 863 |
| XceI | RCATGY | 1 cut(s) | 107 |
| XspI | CTAG | 1 cut(s) | 407 |