pycom10g21720
RLK Family

cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
24274944 .. 24276301
1358 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g21720.2

Sequence Viewer

Length: 408 bp
ATGTTTCAATACATGACTACATCTCACAGAAAAAATATATCAACTGTCAATGGTACTTTGGCACCTGTGTGTGGTGCCGGCACTGTGCATCTCACCCCGTCACTTCCCTTACATCATTGTTTGCTTGTTCCTTCTTTATCCCATCACTTGTTGTCCATACCACAGGTTACTGAACAATTGGATTGTGTTGTTCTAATGTATCCGTCCTTTTGTCTACTTCAGGATATTCAGACCAAGGAGATAATTGGGCGTGGCACTAAGAGAGAGGGGTTGTACTATGTGGACGACGTCGTTTCTGGCAGAGCTAATGCAGTTCGAGCGTCCCGATCTAGTAATTTACAAGAAGTGTGGTTGTTGCATCGTCGGTTAGGGCATGTATCTTTTGGCGATCATAGATGTCGTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

136

Amino Acids

15.1

Weight (kDa)

8.97

Isoelectric Point (pI)

51.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018704)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03940
malus_domestica MD17G1120000.v1.1
pyrus_communis pycom03g19420 pycom10g09460 pycom10g21720 pycom13g28160 pycom14g05170
rosa_chinensis RchiOBHm_Chr3g0491631
rosa_wichuraiana Rw5G011130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 291
AccB1I GGYRCC 2 cut(s) 61, 74
AccI GTMKAC 1 cut(s) 214
AcuI CTGAAG 1 cut(s) 203
AcyI GRCGYC 1 cut(s) 288
AfaI GTAC 2 cut(s) 55, 275
AfiI CCNNNNNNNGG 1 cut(s) 71
AgsI TTSAA 1 cut(s) 8
AleI CACNNNNGTG 1 cut(s) 67
AluBI AGCT 1 cut(s) 305
AluI AGCT 1 cut(s) 305
AsuHPI GGTGA 1 cut(s) 85
BanI GGYRCC 2 cut(s) 61, 74
BccI CCATC 1 cut(s) 150
BciVI GTATCC 1 cut(s) 210
BfaI CTAG 1 cut(s) 330
BfuI GTATCC 1 cut(s) 210
BmiI GGNNCC 2 cut(s) 63, 76
BmsI GCATC 2 cut(s) 97, 367
BsaHI GRCGYC 1 cut(s) 288
BsaJI CCNNGG 1 cut(s) 234
Bsc4I CCNNNNNNNGG 1 cut(s) 71
Bse118I RCCGGY 1 cut(s) 77
BseDI CCNNGG 1 cut(s) 234
BseLI CCNNNNNNNGG 1 cut(s) 71
BshNI GGYRCC 2 cut(s) 61, 74
BsiSI CCGG 1 cut(s) 78
BslFI GGGAC 1 cut(s) 307
BslI CCNNNNNNNGG 1 cut(s) 71
BsmFI GGGAC 1 cut(s) 307
Bsp143I GATC 2 cut(s) 326, 388
BspLI GGNNCC 2 cut(s) 63, 76
BspT107I GGYRCC 2 cut(s) 61, 74
BsrFI RCCGGY 1 cut(s) 77
BssAI RCCGGY 1 cut(s) 77
BssECI CCNNGG 1 cut(s) 234
BssMI GATC 2 cut(s) 326, 388
BssNI GRCGYC 1 cut(s) 288
BssT1I CCWWGG 1 cut(s) 234
Bst4CI ACNGT 2 cut(s) 46, 85
BstACI GRCGYC 1 cut(s) 288
BstC8I GCNNGC 1 cut(s) 79
BstDEI CTNAG 1 cut(s) 258
BstKTI GATC 2 cut(s) 329, 391
BstMBI GATC 2 cut(s) 326, 388
BstMWI GCNNNNNNNGC 1 cut(s) 317
BstNSI RCATGY 1 cut(s) 377
BsuI GTATCC 1 cut(s) 210
BtsIMutI CAGTG 1 cut(s) 81
Cac8I GCNNGC 1 cut(s) 79
Cfr10I RCCGGY 1 cut(s) 77
CseI GACGC 1 cut(s) 309
Csp6I GTAC 2 cut(s) 54, 274
CspCI CAANNNNNGTGG 2 cut(s) 329, 364
CviAII CATG 2 cut(s) 13, 374
CviJI RGCY 1 cut(s) 305
CviKI_1 RGCY 1 cut(s) 305
CviQI GTAC 2 cut(s) 54, 274
DdeI CTNAG 1 cut(s) 258
DpnI GATC 2 cut(s) 328, 390
DpnII GATC 2 cut(s) 326, 388
Eco130I CCWWGG 1 cut(s) 234
Eco57I CTGAAG 1 cut(s) 203
EcoT14I CCWWGG 1 cut(s) 234
ErhI CCWWGG 1 cut(s) 234
FaeI CATG 2 cut(s) 16, 377
FaiI YATR 6 cut(s) 14, 38, 158, 279, 375, 393
FaqI GGGAC 1 cut(s) 307
FatI CATG 2 cut(s) 12, 373
FblI GTMKAC 1 cut(s) 214
FspBI CTAG 1 cut(s) 330
HapII CCGG 1 cut(s) 78
HgaI GACGC 1 cut(s) 309
Hin1I GRCGYC 1 cut(s) 288
Hin1II CATG 2 cut(s) 16, 377
HpaII CCGG 1 cut(s) 78
HphI GGTGA 1 cut(s) 85
Hpy166II GTNNAC 2 cut(s) 215, 283
Hpy188I TCNGA 1 cut(s) 231
Hpy188III TCNNGA 2 cut(s) 221, 324
Hpy8I GTNNAC 2 cut(s) 215, 283
Hpy99I CGWCG 3 cut(s) 290, 293, 366
HpyAV CCTTC 1 cut(s) 141
HpyCH4III ACNGT 2 cut(s) 46, 85
HpyCH4IV ACGT 1 cut(s) 288
HpyCH4V TGCA 3 cut(s) 88, 311, 358
HpyF10VI GCNNNNNNNGC 1 cut(s) 317
HpyF3I CTNAG 1 cut(s) 258
HpySE526I ACGT 1 cut(s) 288
Hsp92I GRCGYC 1 cut(s) 288
Hsp92II CATG 2 cut(s) 16, 377
KroI GCCGGC 1 cut(s) 77
KroNI GCCGGC 1 cut(s) 79
Kzo9I GATC 2 cut(s) 326, 388
LpnPI CCDG 5 cut(s) 78, 91, 149, 206, 282
LweI GCATC 2 cut(s) 97, 367
MaeI CTAG 1 cut(s) 330
MaeII ACGT 1 cut(s) 288
MaeIII GTNAC 2 cut(s) 99, 166
MalI GATC 2 cut(s) 328, 390
MboI GATC 2 cut(s) 326, 388
MfeI CAATTG 1 cut(s) 176
MluCI AATT 3 cut(s) 176, 243, 334
MnlI CCTC 1 cut(s) 259
MroNI GCCGGC 1 cut(s) 77
MslI CAYNNNNRTG 1 cut(s) 67
MspI CCGG 1 cut(s) 78
MunI CAATTG 1 cut(s) 176
MwoI GCNNNNNNNGC 1 cut(s) 317
NaeI GCCGGC 1 cut(s) 79
NdeII GATC 2 cut(s) 326, 388
NgoMIV GCCGGC 1 cut(s) 77
NlaIII CATG 2 cut(s) 16, 377
NlaIV GGNNCC 2 cut(s) 63, 76
NmuCI GTSAC 1 cut(s) 99
NspI RCATGY 1 cut(s) 377
OliI CACNNNNGTG 1 cut(s) 67
PcsI WCGNNNNNNNCGW 1 cut(s) 322
PdiI GCCGGC 1 cut(s) 79
PflFI GACNNNGTC 1 cut(s) 287
PspN4I GGNNCC 2 cut(s) 63, 76
PsyI GACNNNGTC 1 cut(s) 287
RsaI GTAC 2 cut(s) 55, 275
RsaNI GTAC 2 cut(s) 54, 274
RseI CAYNNNNRTG 1 cut(s) 67
Sau3AI GATC 2 cut(s) 326, 388
SetI ASST 4 cut(s) 67, 168, 291, 307
SfaNI GCATC 2 cut(s) 97, 367
SmiMI CAYNNNNRTG 1 cut(s) 67
Sse9I AATT 3 cut(s) 176, 243, 334
SspMI CTAG 1 cut(s) 330
StyI CCWWGG 1 cut(s) 234
TaaI ACNGT 2 cut(s) 46, 85
TaiI ACGT 1 cut(s) 291
TaqI TCGA 1 cut(s) 316
TasI AATT 3 cut(s) 176, 243, 334
TatI WGTACW 1 cut(s) 273
TscAI CASTG 1 cut(s) 88
TseFI GTSAC 1 cut(s) 99
Tsp45I GTSAC 1 cut(s) 99
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 1 cut(s) 88
Tth111I GACNNNGTC 1 cut(s) 287
XceI RCATGY 1 cut(s) 377
XmiI GTMKAC 1 cut(s) 214
XspI CTAG 1 cut(s) 330
ZraI GACGTC 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.