AT4G05520
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0010763
Physical Location & Seq
Forward (+)
2804403 .. 2808015
3613 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G05520.2

Sequence Viewer

Length: 1641 bp
ATGGAGACTTCATCGACGATCTCGATCGGTTCTTGTTTAAAAGAGCATCAGAAGATCTACAAGGAATGGTTCAACATCGCCGATTCAGATGGAGATGGTCGTGTTTCGGGTAACGATGCTACAAAGTTCTTCGCGATGTCAAAGCTTTCTCGCCAGGAACTCAAACAGGTTTGGGCAGTTGCGGATTCAAAGCGGCAAGGATTTCTCGGTTTATCGGAGTTCATCACTGCGATGAAGCTCGTCTCATTGGCACAAGAAGGACATGAAATTACTTCAGACCTTCTCAAAGGCTCAATTGACATGAAGAGTGTGGAACTTCCAGTGTTGGAAGGACTAGAAAACGTTGTATCAAAGCAGAAAGTGTCAAAAACAAATGTGGATGTTGAAGACAATGTAGTTACCAAGCCACAAGTCACGGCAAAAACTCCTTGGTTCAAATCAAAATCTATTATTAAGCCACAAGTAAATGTGGTGACAATTGTTGATGGCTTGAAAAGATTGTACACTGAAAAGCTAAAGCCTTTGGAAGTCACATATCGGTTCAATGATTTTGCATCCCCGGTACTGACTAGTAGCGATTTTGATGCCAAACCAATGGTAATGCTTTTGGGTCAATATTCCACCGGAAAAACAACATTTATAAAACACTTGCTCGGATGTGACTACCCAGGAGCTCATATCGGTCCAGAGCCAACAACAGATAGGTTTGTAGTTGCAATGAGTGGACCAGATGAGCGGACTATACCTGGAAATACCATGGCTGTTCAAGCTGACATGCCATTTAACGGACTAACAAGCTTTGGAGGTGCTTTCCTCTCAAAGTTCGAGTGTTCTCAAATGCCGCATCCGGTCTTGGACCAAATTACTCTTGTAGACACTCCTGGAGTTCTTTCAGGAGAGAAACAAAGGATGCAAAGGAGCTATGACTTCACTGGTGTCATCTCATGGTTTGCATCTAAATGCGACATGATTCTCCTGCTCTTTGATCCCCACAAGCTTGACATCAGTGATGAATTCAAACGTGTGATAACATCTCTACGTGGTAATGAAGACAAGATCCGTGTTGTCTTAAACAAAGCTGACCAAGTTGATACTCAACAACTAATGAGAGTGTATGGAGCATTGATGTGGTCGCTTGGTAAAGTCCTGAACACACCAGAGGTCGTACGTGTCTATATTGGGTCCTTCAATGACAAACCCATAAACGAAGTTGCAGTTGGACCGATTGGGAAAGAACTCTTTGAGAAAGAGCAAAATGATCTTCTAGCAGACTTAATGGACGTACCCAAGAAAGCATGTGACAGAAAGATTAATGAGTTTGTGAAGCGAGCTCGATCTGCAAAGATAAATGCATACATAATGAGTCACCTTAAGAAGGAAATGCCAGCAATGATGGGCAAATCCAAAGCTCAGCAACGTCTCATGGACAATCTCGAAGAAGAATTTGGAAAGGTGCAGCGAGAGTTTCATCTTCCAGCTGGAGACTTTCCAAGTGTGGAACATTTTAGAGAAGTATTGGGAGGCTATAACATTGACAAATTCGAGAAACTGAAGCCTAAGATGATTCAAGCAGTAGATGATATGCTGGGATACGACATTCCAGATCTCTTGAAGAAATTCAGAAATCCTTATGATAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0005911 GO:0005929 GO:0006810 GO:0006886 GO:0006897 GO:0006996 GO:0007275 GO:0007399 GO:0008104 GO:0008150 GO:0009506 GO:0009719 GO:0009987 GO:0010008 GO:0010033 GO:0010830 GO:0010831 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0020016 GO:0020018 GO:0022008 GO:0022603 GO:0022607 GO:0030030 GO:0030031 GO:0030054 GO:0030154 GO:0030182 GO:0031090 GO:0031175 GO:0031253 GO:0031410 GO:0031901 GO:0031982 GO:0032386 GO:0032388 GO:0032456 GO:0032501 GO:0032502 GO:0032879 GO:0032956 GO:0032970 GO:0033036 GO:0033043 GO:0033365 GO:0034613 GO:0042221 GO:0042886 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044441 GO:0044444 GO:0044446 GO:0044459 GO:0044463 GO:0044464 GO:0044782 GO:0045184 GO:0045595 GO:0045597 GO:0046907 GO:0048468 GO:0048518 GO:0048522 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051094 GO:0051128 GO:0051130 GO:0051147 GO:0051149 GO:0051153 GO:0051155 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0051493 GO:0051641 GO:0051649 GO:0051716 GO:0055037 GO:0055038 GO:0055044 GO:0060142 GO:0060143 GO:0060170 GO:0060271 GO:0060341 GO:0060627 GO:0061512 GO:0065003 GO:0065007 GO:0070727 GO:0070848 GO:0070887 GO:0070925 GO:0071310 GO:0071363 GO:0071495 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0097708 GO:0098588 GO:0098590 GO:0098657 GO:0098805 GO:0120025 GO:0120031 GO:0120036 GO:0120038 GO:1901739 GO:1901741 GO:1990089 GO:1990090 GO:2001135 GO:2001137
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Dynamin_N EF-hand_4 EF-hand_7 EHD_N

Protein Analysis

546

Amino Acids

61.38

Weight (kDa)

6.78

Isoelectric Point (pI)

28.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EH PF12763 17 - 90 1.2e-10 EH domain
EF-hand_7 PF13499 21 - 79 6.3e-06 EF-hand domain pair
EHD_N PF16880 162 - 194 6.9e-16 N-terminal EH-domain containing protein
Dynamin_N PF00350 199 - 359 4.9e-13 Dynamin family
MMR_HSR1 PF01926 199 - 358 1.8e-07 50S ribosome-binding GTPase
DUF5600 PF18150 434 - 535 6.8e-36 Domain of unknown function (DUF5600)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 641
AccBSI CCGCTC 1 cut(s) 736
AccI GTMKAC 1 cut(s) 873
AccII CGCG 1 cut(s) 134
AciI CCGC 4 cut(s) 182, 193, 736, 842
AclI AACGTT 1 cut(s) 342
AclWI GGATC 2 cut(s) 980, 1051
AcsI RAATTY 4 cut(s) 1013, 1442, 1538, 1616
AcuI CTGAAG 2 cut(s) 258, 1571
AfaI GTAC 4 cut(s) 503, 564, 1167, 1284
AfiI CCNNNNNNNGG 2 cut(s) 785, 1375
AflII CTTAAG 1 cut(s) 1370
AflIII ACRYGT 2 cut(s) 1021, 1168
AhlI ACTAGT 1 cut(s) 569
AjnI CCWGG 4 cut(s) 153, 667, 745, 880
AjuI GAANNNNNNNTTGG 4 cut(s) 1200, 1232, 1428, 1460
Alw21I GWGCWC 2 cut(s) 676, 1333
Alw26I GTCTC 3 cut(s) 247, 1424, 1476
AlwI GGATC 2 cut(s) 980, 1051
ApeKI GCWGC 1 cut(s) 1456
ApoI RAATTY 4 cut(s) 1013, 1442, 1538, 1616
AseI ATTAAT 1 cut(s) 1311
Asp700I GAANNNNTTC 1 cut(s) 1616
AspS9I GGNCC 5 cut(s) 683, 725, 856, 1182, 1220
AsuC2I CCSGG 1 cut(s) 560
AsuHPI GGTGA 2 cut(s) 484, 1358
AvaII GGWCC 5 cut(s) 683, 725, 856, 1182, 1220
BanII GRGCYC 2 cut(s) 676, 1333
BbsI GAAGAC 2 cut(s) 393, 1056
Bbv12I GWGCWC 2 cut(s) 676, 1333
BbvI GCAGC 1 cut(s) 1468
BccI CCATC 4 cut(s) 83, 89, 479, 1387
BceAI ACGGC 1 cut(s) 432
BcgI CGANNNNNNTGC 2 cut(s) 566, 600
BciT130I CCWGG 4 cut(s) 155, 669, 747, 882
BciVI GTATCC 1 cut(s) 1583
BcnI CCSGG 1 cut(s) 560
BcoDI GTCTC 3 cut(s) 247, 1424, 1476
BcuI ACTAGT 1 cut(s) 569
BfaI CTAG 3 cut(s) 335, 570, 1265
BfrI CTTAAG 1 cut(s) 1370
BfuI GTATCC 1 cut(s) 1583
BglII AGATCT 2 cut(s) 54, 1603
BisI GCNGC 3 cut(s) 194, 842, 1457
BlpI GCTNAGC 1 cut(s) 1410
BlsI GCNGC 3 cut(s) 195, 843, 1458
Bme1390I CCNGG 5 cut(s) 155, 560, 669, 747, 882
Bme18I GGWCC 5 cut(s) 683, 725, 856, 1182, 1220
BmgT120I GGNCC 5 cut(s) 683, 725, 856, 1182, 1220
BmiI GGNNCC 1 cut(s) 1183
BmrFI CCNGG 5 cut(s) 155, 560, 669, 747, 882
BmsI GCATC 7 cut(s) 55, 106, 563, 574, 853, 900, 962
BpiI GAAGAC 2 cut(s) 393, 1056
BpmI CTGGAG 2 cut(s) 903, 1500
Bpu1102I GCTNAGC 1 cut(s) 1410
BpuMI CCSGG 1 cut(s) 560
BsaAI YACGTR 2 cut(s) 1040, 1169
BsaBI GATNNNNATC 1 cut(s) 23
BsaJI CCNNGG 4 cut(s) 428, 558, 667, 756
BsaWI WCCGGW 2 cut(s) 623, 847
Bsc4I CCNNNNNNNGG 2 cut(s) 785, 1375
Bse1I ACTGG 2 cut(s) 320, 937
Bse3DI GCAATG 2 cut(s) 723, 1395
Bse8I GATNNNNATC 1 cut(s) 23
BseBI CCWGG 4 cut(s) 155, 669, 747, 882
BseDI CCNNGG 4 cut(s) 428, 558, 667, 756
BseGI GGATG 5 cut(s) 385, 554, 662, 844, 915
BseJI GATNNNNATC 1 cut(s) 23
BseLI CCNNNNNNNGG 2 cut(s) 785, 1375
BseMI GCAATG 2 cut(s) 723, 1395
BseMII CTCAG 1 cut(s) 1424
BseNI ACTGG 2 cut(s) 320, 937
BseXI GCAGC 1 cut(s) 1468
BseYI CCCAGC 1 cut(s) 1585
BsgI GTGCAG 1 cut(s) 1475
Bsh1236I CGCG 1 cut(s) 134
Bsh1285I CGRYCG 1 cut(s) 27
BsiEI CGRYCG 1 cut(s) 27
BsiHKAI GWGCWC 2 cut(s) 676, 1333
BsiSI CCGG 3 cut(s) 560, 624, 848
BsiWI CGTACG 1 cut(s) 1165
BslI CCNNNNNNNGG 2 cut(s) 785, 1375
BsmAI GTCTC 3 cut(s) 247, 1424, 1476
BsmBI CGTCTC 2 cut(s) 247, 1424
Bsp1286I GDGCHC 2 cut(s) 676, 1333
Bsp1407I TGTACA 1 cut(s) 501
Bsp143I GATC 8 cut(s) 18, 24, 54, 985, 1056, 1258, 1334, 1603
Bsp1720I GCTNAGC 1 cut(s) 1410
Bsp19I CCATGG 1 cut(s) 756
Bsp68I TCGCGA 1 cut(s) 134
BspACI CCGC 4 cut(s) 182, 193, 736, 842
BspCNI CTCAG 1 cut(s) 1423
BspFNI CGCG 1 cut(s) 134
BspLI GGNNCC 1 cut(s) 1183
BspPI GGATC 2 cut(s) 980, 1051
BspTI CTTAAG 1 cut(s) 1370
BsrBI CCGCTC 1 cut(s) 736
BsrDI GCAATG 2 cut(s) 723, 1395
BsrGI TGTACA 1 cut(s) 501
BsrI ACTGG 2 cut(s) 320, 937
BssECI CCNNGG 4 cut(s) 428, 558, 667, 756
BssMI GATC 8 cut(s) 18, 24, 54, 985, 1056, 1258, 1334, 1603
BssT1I CCWWGG 2 cut(s) 428, 756
Bst2UI CCWGG 4 cut(s) 155, 669, 747, 882
Bst6I CTCTTC 1 cut(s) 299
BstAFI CTTAAG 1 cut(s) 1370
BstAUI TGTACA 1 cut(s) 501
BstBAI YACGTR 2 cut(s) 1040, 1169
BstC8I GCNNGC 2 cut(s) 1329, 1386
BstDEI CTNAG 2 cut(s) 1410, 1557
BstDSI CCRYGG 1 cut(s) 756
BstENI CCTNNNNNAGG 1 cut(s) 1373
BstF5I GGATG 5 cut(s) 385, 554, 662, 844, 915
BstFNI CGCG 1 cut(s) 134
BstKTI GATC 8 cut(s) 21, 27, 57, 988, 1059, 1261, 1337, 1606
BstMAI GTCTC 3 cut(s) 247, 1424, 1476
BstMBI GATC 8 cut(s) 18, 24, 54, 985, 1056, 1258, 1334, 1603
BstMCI CGRYCG 1 cut(s) 27
BstMWI GCNNNNNNNGC 2 cut(s) 767, 1337
BstNI CCWGG 4 cut(s) 155, 669, 747, 882
BstNSI RCATGY 2 cut(s) 778, 1299
BstSCI CCNGG 5 cut(s) 153, 558, 667, 745, 880
BstUI CGCG 1 cut(s) 134
BstV1I GCAGC 1 cut(s) 1468
BstV2I GAAGAC 2 cut(s) 393, 1056
BstX2I RGATCY 3 cut(s) 54, 1056, 1603
BstXI CCANNNNNNTGG 1 cut(s) 595
BstYI RGATCY 3 cut(s) 54, 1056, 1603
BsuI GTATCC 1 cut(s) 1583
BtgI CCRYGG 1 cut(s) 756
BtgZI GCGATG 3 cut(s) 61, 149, 245
BtsCI GGATG 5 cut(s) 385, 554, 662, 844, 915
BtsI GCAGTG 1 cut(s) 225
BtsIMutI CAGTG 5 cut(s) 225, 327, 504, 930, 1012
BtuMI TCGCGA 1 cut(s) 134
Cac8I GCNNGC 2 cut(s) 1329, 1386
Cfr13I GGNCC 5 cut(s) 683, 725, 856, 1182, 1220
Csp6I GTAC 4 cut(s) 502, 563, 1166, 1283
CviAII CATG 8 cut(s) 263, 301, 757, 775, 945, 967, 1296, 1423
CviQI GTAC 4 cut(s) 502, 563, 1166, 1283
DdeI CTNAG 2 cut(s) 1410, 1557
DpnI GATC 8 cut(s) 20, 26, 56, 987, 1058, 1260, 1336, 1605
DpnII GATC 8 cut(s) 18, 24, 54, 985, 1056, 1258, 1334, 1603
DraI TTTAAA 1 cut(s) 39
Eam1104I CTCTTC 1 cut(s) 299
EarI CTCTTC 1 cut(s) 299
Ecl136II GAGCTC 2 cut(s) 674, 1331
Eco130I CCWWGG 2 cut(s) 428, 756
Eco24I GRGCYC 2 cut(s) 676, 1333
Eco47I GGWCC 5 cut(s) 683, 725, 856, 1182, 1220
Eco53kI GAGCTC 2 cut(s) 674, 1331
Eco57I CTGAAG 2 cut(s) 258, 1571
EcoICRI GAGCTC 2 cut(s) 674, 1331
EcoNI CCTNNNNNAGG 1 cut(s) 1373
EcoO109I RGGNCCY 1 cut(s) 1182
EcoRI GAATTC 1 cut(s) 1013
EcoRII CCWGG 4 cut(s) 153, 667, 745, 880
EcoT14I CCWWGG 2 cut(s) 428, 756
EcoT22I ATGCAT 1 cut(s) 1354
EcoT38I GRGCYC 2 cut(s) 676, 1333
ErhI CCWWGG 2 cut(s) 428, 756
Esp3I CGTCTC 2 cut(s) 247, 1424
FaeI CATG 8 cut(s) 266, 304, 760, 778, 948, 970, 1299, 1426
FatI CATG 8 cut(s) 262, 300, 756, 774, 944, 966, 1295, 1422
FblI GTMKAC 1 cut(s) 873
Fnu4HI GCNGC 3 cut(s) 194, 842, 1457
FokI GGATG 5 cut(s) 392, 541, 669, 831, 922
FriOI GRGCYC 2 cut(s) 676, 1333
Fsp4HI GCNGC 3 cut(s) 194, 842, 1457
FspBI CTAG 3 cut(s) 335, 570, 1265
GluI GCNGC 3 cut(s) 194, 842, 1457
GsaI CCCAGC 1 cut(s) 1589
GsuI CTGGAG 2 cut(s) 903, 1500
HapII CCGG 3 cut(s) 560, 624, 848
Hin1II CATG 8 cut(s) 266, 304, 760, 778, 948, 970, 1299, 1426
HindIII AAGCTT 3 cut(s) 143, 796, 995
HinfI GANTC 5 cut(s) 83, 185, 970, 1363, 1564
HpaII CCGG 3 cut(s) 560, 624, 848
HphI GGTGA 2 cut(s) 484, 1358
Hpy166II GTNNAC 3 cut(s) 504, 725, 874
Hpy188I TCNGA 6 cut(s) 51, 88, 217, 277, 656, 1622
Hpy188III TCNNGA 9 cut(s) 22, 133, 686, 894, 1147, 1433, 1543, 1601, 1609
Hpy8I GTNNAC 3 cut(s) 504, 725, 874
Hpy99I CGWCG 1 cut(s) 19
HpyAV CCTTC 5 cut(s) 251, 290, 323, 1195, 1369
HpyCH4IV ACGT 6 cut(s) 342, 1021, 1039, 1168, 1281, 1417
HpyCH4V TGCA 8 cut(s) 554, 716, 913, 953, 1214, 1340, 1352, 1456
HpyF10VI GCNNNNNNNGC 2 cut(s) 767, 1337
HpyF3I CTNAG 2 cut(s) 1410, 1557
HpySE526I ACGT 6 cut(s) 342, 1021, 1039, 1168, 1281, 1417
Hsp92II CATG 8 cut(s) 266, 304, 760, 778, 948, 970, 1299, 1426
Kzo9I GATC 8 cut(s) 18, 24, 54, 985, 1056, 1258, 1334, 1603
LmnI GCTCC 3 cut(s) 671, 918, 1118
Lsp1109I GCAGC 1 cut(s) 1468
LweI GCATC 7 cut(s) 55, 106, 563, 574, 853, 900, 962
MaeI CTAG 3 cut(s) 335, 570, 1265
MaeII ACGT 6 cut(s) 342, 1021, 1039, 1168, 1281, 1417
MaeIII GTNAC 8 cut(s) 110, 397, 412, 472, 529, 659, 1298, 1364
MalI GATC 8 cut(s) 20, 26, 56, 987, 1058, 1260, 1336, 1605
MbiI CCGCTC 1 cut(s) 736
MboI GATC 8 cut(s) 18, 24, 54, 985, 1056, 1258, 1334, 1603
MfeI CAATTG 2 cut(s) 294, 477
MflI RGATCY 3 cut(s) 54, 1056, 1603
MhlI GDGCHC 2 cut(s) 676, 1333
MluCI AATT 9 cut(s) 267, 294, 477, 861, 1013, 1442, 1538, 1616, 1636
MlyI GAGTC 1 cut(s) 1372
MmeI TCCRAC 2 cut(s) 306, 1198
MnlI CCTC 4 cut(s) 797, 824, 1153, 1514
Mph1103I ATGCAT 1 cut(s) 1354
MroXI GAANNNNTTC 1 cut(s) 1616
MseI TTAA 8 cut(s) 38, 453, 783, 1070, 1274, 1311, 1371, 1639
MslI CAYNNNNRTG 3 cut(s) 230, 958, 1126
MspA1I CMGCKG 1 cut(s) 1478
MspCI CTTAAG 1 cut(s) 1370
MspI CCGG 3 cut(s) 560, 624, 848
MspR9I CCNGG 5 cut(s) 155, 560, 669, 747, 882
MunI CAATTG 2 cut(s) 294, 477
MvaI CCWGG 4 cut(s) 155, 669, 747, 882
MvnI CGCG 1 cut(s) 134
MwoI GCNNNNNNNGC 2 cut(s) 767, 1337
NciI CCSGG 1 cut(s) 560
NcoI CCATGG 1 cut(s) 756
NdeII GATC 8 cut(s) 18, 24, 54, 985, 1056, 1258, 1334, 1603
NlaIII CATG 8 cut(s) 266, 304, 760, 778, 948, 970, 1299, 1426
NlaIV GGNNCC 1 cut(s) 1183
NmuCI GTSAC 6 cut(s) 412, 472, 529, 659, 1298, 1364
NruI TCGCGA 1 cut(s) 134
NsiI ATGCAT 1 cut(s) 1354
NspI RCATGY 2 cut(s) 778, 1299
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PdmI GAANNNNTTC 1 cut(s) 1616
PfeI GAWTC 4 cut(s) 83, 185, 970, 1564
Pfl23II CGTACG 1 cut(s) 1165
PfoI TCCNGGA 1 cut(s) 880
PkrI GCNGC 3 cut(s) 195, 843, 1458
Ple19I CGATCG 1 cut(s) 27
PleI GAGTC 1 cut(s) 1371
PpsI GAGTC 1 cut(s) 1371
Ppu21I YACGTR 2 cut(s) 1040, 1169
PpuMI RGGWCCY 1 cut(s) 1182
PshBI ATTAAT 1 cut(s) 1311
PsiI TTATAA 1 cut(s) 641
Psp124BI GAGCTC 2 cut(s) 676, 1333
Psp1406I AACGTT 1 cut(s) 342
Psp5II RGGWCCY 1 cut(s) 1182
Psp6I CCWGG 4 cut(s) 153, 667, 745, 880
PspFI CCCAGC 1 cut(s) 1585
PspGI CCWGG 4 cut(s) 153, 667, 745, 880
PspLI CGTACG 1 cut(s) 1165
PspN4I GGNNCC 1 cut(s) 1183
PspPI GGNCC 5 cut(s) 683, 725, 856, 1182, 1220
PspPPI RGGWCCY 1 cut(s) 1182
PsuI RGATCY 3 cut(s) 54, 1056, 1603
PvuI CGATCG 1 cut(s) 27
PvuII CAGCTG 1 cut(s) 1478
RruI TCGCGA 1 cut(s) 134
RsaI GTAC 4 cut(s) 503, 564, 1167, 1284
RsaNI GTAC 4 cut(s) 502, 563, 1166, 1283
RseI CAYNNNNRTG 3 cut(s) 230, 958, 1126
SacI GAGCTC 2 cut(s) 676, 1333
SaqAI TTAA 8 cut(s) 38, 453, 783, 1070, 1274, 1311, 1371, 1639
SatI GCNGC 3 cut(s) 194, 842, 1457
Sau3AI GATC 8 cut(s) 18, 24, 54, 985, 1056, 1258, 1334, 1603
Sau96I GGNCC 5 cut(s) 683, 725, 856, 1182, 1220
SchI GAGTC 1 cut(s) 1372
ScrFI CCNGG 5 cut(s) 155, 560, 669, 747, 882
SduI GDGCHC 2 cut(s) 676, 1333
SfaNI GCATC 7 cut(s) 55, 106, 563, 574, 853, 900, 962
SinI GGWCC 5 cut(s) 683, 725, 856, 1182, 1220
SmiMI CAYNNNNRTG 3 cut(s) 230, 958, 1126
SmlI CTYRAG 1 cut(s) 1370
SmoI CTYRAG 1 cut(s) 1370
SpeI ACTAGT 1 cut(s) 569
Sse9I AATT 9 cut(s) 267, 294, 477, 861, 1013, 1442, 1538, 1616, 1636
SsiI CCGC 4 cut(s) 182, 193, 736, 842
SspI AATATT 1 cut(s) 617
SspMI CTAG 3 cut(s) 335, 570, 1265
SstI GAGCTC 2 cut(s) 676, 1333
StyD4I CCNGG 5 cut(s) 153, 558, 667, 745, 880
StyI CCWWGG 2 cut(s) 428, 756
TaiI ACGT 6 cut(s) 345, 1024, 1042, 1171, 1284, 1420
TaqI TCGA 6 cut(s) 14, 23, 825, 1333, 1434, 1542
TaqII GACCGA 2 cut(s) 671, 1237
TasI AATT 9 cut(s) 267, 294, 477, 861, 1013, 1442, 1538, 1616, 1636
TatI WGTACW 1 cut(s) 501
TauI GCSGC 2 cut(s) 196, 844
TfiI GAWTC 4 cut(s) 83, 185, 970, 1564
Tru1I TTAA 8 cut(s) 38, 453, 783, 1070, 1274, 1311, 1371, 1639
Tru9I TTAA 8 cut(s) 38, 453, 783, 1070, 1274, 1311, 1371, 1639
TscAI CASTG 5 cut(s) 232, 327, 511, 937, 1012
TseFI GTSAC 6 cut(s) 412, 472, 529, 659, 1298, 1364
TseI GCWGC 1 cut(s) 1456
Tsp45I GTSAC 6 cut(s) 412, 472, 529, 659, 1298, 1364
TspDTI ATGAA 7 cut(s) 211, 248, 279, 317, 1026, 1062, 1457
TspGWI ACGGA 2 cut(s) 801, 1049
TspRI CASTG 5 cut(s) 232, 327, 511, 937, 1012
Vha464I CTTAAG 1 cut(s) 1370
VpaK11BI GGWCC 5 cut(s) 683, 725, 856, 1182, 1220
VspI ATTAAT 1 cut(s) 1311
XagI CCTNNNNNAGG 1 cut(s) 1373
XapI RAATTY 4 cut(s) 1013, 1442, 1538, 1616
XceI RCATGY 2 cut(s) 778, 1299
XmiI GTMKAC 1 cut(s) 873
XmnI GAANNNNTTC 1 cut(s) 1616
XspI CTAG 3 cut(s) 335, 570, 1265
Zsp2I ATGCAT 1 cut(s) 1354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.