AT4G08920

Blue/Ultraviolet sensing protein C terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0014599
Physical Location & Seq
Forward (+)
5723651 .. 5727268
3618 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G08920.1

Sequence Viewer

Length: 2046 bp
ATGTCTGGTTCTGTATCTGGTTGTGGTTCTGGTGGTTGTAGTATTGTATGGTTTAGAAGAGATCTTAGGGTTGAAGATAATCCAGCTTTAGCAGCAGCAGTAAGAGCTGGTCCAGTGATTGCTCTGTTTGTTTGGGCACCAGAAGAAGAAGGACACTATCATCCAGGTAGGGTTTCTAGGTGGTGGCTCAAGAACAGTTTGGCTCAGCTTGATTCTTCTCTTAGAAGTCTTGGTACTTGTCTTATCACCAAGAGATCTACTGATAGTGTTGCTTCTCTTCTTGATGTTGTTAAATCCACTGGTGCTTCTCAGATCTTCTTCAACCATTTGTATGATCCATTGTCTTTGGTGCGTGATCACCGAGCTAAAGATGTTTTGACGGCGCAAGGCATAGCGGTTCGATCATTCAACGCAGACTTGCTTTATGAGCCATGGGAAGTGACTGATGAATTAGGCCGTCCTTTCTCTATGTTTGCTGCGTTTTGGGAGAGATGTCTTAGTATGCCTTATGACCCTGAGTCTCCTCTTCTTCCACCTAAGAAGATCATTTCAGGGGATGTGTCTAAATGTGTTGCGGATCCATTGGTGTTTGAGGATGACTCTGAGAAAGGAAGCAATGCACTTCTGGCTCGTGCTTGGTCTCCTGGATGGAGTAATGGTGATAAAGCTCTCACAACGTTTATAAACGGTCCATTGCTTGAATACTCTAAGAACCGCAGAAAAGCCGATAGTGCTACAACCTCGTTTCTTTCTCCACACTTGCATTTTGGGGAAGTGAGTGTGAGAAAAGTTTTTCATCTTGTTCGGATCAAACAGGTCGCGTGGGCAAACGAAGGAAACGAGGCCGGGGAAGAAAGCGTGAATCTTTTCCTGAAATCTATTGGTCTCAGGGAGTATTCTAGGTACATAAGTTTTAACCATCCATATTCCCATGAAAGACCACTTCTTGGCCATCTAAAGTTCTTCCCTTGGGCTGTGGATGAGAACTATTTCAAGGCATGGAGGCAAGGCCGGACTGGATATCCGTTGGTCGATGCCGGGATGAGAGAGTTATGGGCTACTGGTTGGTTGCATGATCGCATAAGAGTAGTTGTTTCAAGCTTCTTTGTTAAAGTGCTTCAATTACCATGGAGATGGGGGATGAAGTATTTCTGGGACACACTTCTTGATGCGGATTTAGAAAGCGATGCTCTTGGTTGGCAATACATTACCGGTACTCTCCCGGATAGCCGGGAGTTTGATCGCATAGATAACCCTCAGTTTGAAGGGTACAAGTTTGATCCAAATGGTGAATACGTAAGGCGATGGCTTCCTGAACTCTCTAGACTCCCGACAGACTGGATACATCATCCGTGGAACGCACCTGAGTCCGTTCTTCAAGCTGCTGGTATCGAGCTTGGATCAAACTATCCTCTACCAATTGTAGGATTAGACGAAGCAAAAGCACGGCTTCATGAAGCGCTTTCACAGATGTGGCAACTAGAAGCTGCTTCAAGAGCTGCAATAGAGAACGGATCCGAAGAAGGACTTGGAGATTCTGCTGAGGTAGAGGAAGCTCCTATAGAGTTCCCAAGGGACATTACAATGGAAGAGACTGAACCAACCAGACTCAACCCAAACAGGAGATATGAGGATCAGATGGTTCCAAGCATTACTTCTTCTTTGATCAGACCTGAAGAAGACGAAGAGTCGTCTCTTAATTTGAGAAATTCAGTAGGAGATAGCAGAGCAGAGGTTCCAAGGAACATGGTTAACACCAACCAAGCTCAGCAGCGGAGAGCAGAACCGGCTTCAAACCAAGTCACTGCTATGATTCCAGAATTTAATATCAGAATTGTTGCAGAGAGCACTGAAGACTCAACAGCGGAATCTTCCAGCAGCGGAAGGAGAGAAAGAAGCGGAGGCATAGTCCCCGAGTGGTCTCCAGGGTACTCAGAGCAGTTCCCTAGTGAAGAAAATGGTATTGGAGGAGGAAGTACAACGTCTAGCTACTTGCAGAATCACCATGAAATACTGAACTGGAGACGGCTTTCACAAACCGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000302 GO:0000304 GO:0001101 GO:0001558 GO:0002682 GO:0002684 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006464 GO:0006468 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0007623 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0009117 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009639 GO:0009640 GO:0009642 GO:0009644 GO:0009645 GO:0009646 GO:0009719 GO:0009725 GO:0009785 GO:0009791 GO:0009812 GO:0009881 GO:0009882 GO:0009888 GO:0009914 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010073 GO:0010075 GO:0010112 GO:0010114 GO:0010117 GO:0010118 GO:0010218 GO:0010244 GO:0010310 GO:0010343 GO:0010359 GO:0010617 GO:0010817 GO:0012501 GO:0014070 GO:0016301 GO:0016310 GO:0016604 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019222 GO:0019538 GO:0019637 GO:0019725 GO:0022603 GO:0022604 GO:0022898 GO:0023052 GO:0030003 GO:0030522 GO:0030554 GO:0031323 GO:0031347 GO:0031349 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035639 GO:0035690 GO:0036094 GO:0036211 GO:0036473 GO:0038023 GO:0040008 GO:0042221 GO:0042440 GO:0042493 GO:0042592 GO:0042726 GO:0042752 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043269 GO:0043270 GO:0043412 GO:0043900 GO:0043902 GO:0044070 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046283 GO:0046483 GO:0046777 GO:0048037 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050660 GO:0050662 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051049 GO:0051050 GO:0051093 GO:0051128 GO:0051179 GO:0051186 GO:0051193 GO:0051234 GO:0051239 GO:0051241 GO:0051480 GO:0051510 GO:0051606 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055086 GO:0055114 GO:0060089 GO:0060918 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070887 GO:0071000 GO:0071214 GO:0071452 GO:0071478 GO:0071482 GO:0071483 GO:0071496 GO:0071704 GO:0071949 GO:0072387 GO:0072503 GO:0072507 GO:0080134 GO:0097159 GO:0097367 GO:0097468 GO:0098771 GO:0099402 GO:0104004 GO:0140096 GO:1900424 GO:1900426 GO:1900618 GO:1901265 GO:1901332 GO:1901360 GO:1901363 GO:1901371 GO:1901529 GO:1901564 GO:1901672 GO:1901700 GO:1901701 GO:1902347 GO:1902446 GO:1902448 GO:1903793 GO:1903959 GO:1903961 GO:1905421 GO:2000023 GO:2000024 GO:2000026 GO:2000030 GO:2000069 GO:2000280 GO:2000377
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
Cryptochrome_C DNA_photolyase FAD_binding_7

Protein Analysis

681

Amino Acids

76.69

Weight (kDa)

5.23

Isoelectric Point (pI)

53.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 14 - 169 2.5e-39 DNA photolyase
FAD_binding_7 PF03441 290 - 489 2.8e-68 FAD binding domain of DNA photolyase
Cryptochrome_C PF12546 519 - 629 3.7e-32 Blue/Ultraviolet sensing protein C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014599)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08920
fragaria_vesca FvH4_5g37290 FvH4_5g37290
malus_domestica MD00G1201600.v1.1 MD15G1369900.v1.1
prunus_persica Prupe.1G517600_v2.0.a1
pyrus_communis pycom08g15710 pycom15g33100
rosa_chinensis RchiOBHm_Chr7g0238851
rosa_laevigata RLG00000000800
rosa_multiflora Rmu_sc0007101.1_g000007
rosa_roxburghii Rroxscaffold_3G00221540
rosa_rugosa Rorug07G0323900
rosa_samantha Rh7AG478000 Rh7CG495900 Rh7DG463200
rosa_wichuraiana Rw7G039930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 683
AccB1I GGYRCC 1 cut(s) 136
AccB7I CCANNNNNTGG 1 cut(s) 947
AccII CGCG 1 cut(s) 821
AciI CCGC 8 cut(s) 395, 575, 715, 1172, 1774, 1865, 1881, 1899
AclI AACGTT 1 cut(s) 677
AclWI GGATC 9 cut(s) 329, 572, 585, 815, 1274, 1408, 1509, 1522, 1641
AcoI YGGCCR 1 cut(s) 949
AcsI RAATTY 2 cut(s) 1708, 1820
AcuI CTGAAG 2 cut(s) 1695, 1872
AfaI GTAC 6 cut(s) 235, 905, 1216, 1271, 1931, 1978
AfeI AGCGCT 1 cut(s) 1461
AfiI CCNNNNNNNGG 2 cut(s) 947, 1424
AgeI ACCGGT 1 cut(s) 1211
AhdI GACNNNNNGTC 2 cut(s) 517, 1687
AjnI CCWGG 3 cut(s) 163, 643, 1924
AjuI GAANNNNNNNTTGG 6 cut(s) 1512, 1544, 1639, 1671, 1947, 1979
AleI CACNNNNGTG 1 cut(s) 1471
Alw21I GWGCWC 1 cut(s) 1850
Alw26I GTCTC 7 cut(s) 525, 645, 890, 1586, 1698, 1926, 2017
AlwI GGATC 9 cut(s) 329, 572, 585, 815, 1274, 1408, 1509, 1522, 1641
Ama87I CYCGRG 1 cut(s) 1913
Aor51HI AGCGCT 1 cut(s) 1461
AoxI GGCC 4 cut(s) 454, 843, 949, 1009
ApeKI GCWGC 8 cut(s) 92, 95, 476, 1382, 1487, 1499, 1771, 1878
ApoI RAATTY 2 cut(s) 1708, 1820
AsiGI ACCGGT 1 cut(s) 1211
Asp700I GAANNNNTTC 3 cut(s) 866, 989, 1148
AspLEI GCGC 2 cut(s) 385, 1462
AspS9I GGNCC 2 cut(s) 110, 689
AsuC2I CCSGG 5 cut(s) 847, 1039, 1223, 1232, 2041
AsuHPI GGTGA 5 cut(s) 238, 350, 671, 1301, 1994
AvaI CYCGRG 1 cut(s) 1913
AvaII GGWCC 2 cut(s) 110, 689
BaeGI GKGCMC 1 cut(s) 139
BaeI ACNNNNGTAYC 2 cut(s) 895, 928
BalI TGGCCA 1 cut(s) 951
BamHI GGATCC 2 cut(s) 577, 1514
BanI GGYRCC 1 cut(s) 136
BarI GAAGNNNNNNTAC 2 cut(s) 217, 249
BauI CACGAG 1 cut(s) 630
BbsI GAAGAC 2 cut(s) 1686, 1860
Bbv12I GWGCWC 1 cut(s) 1850
BbvCI CCTCAGC 1 cut(s) 1542
BbvI GCAGC 8 cut(s) 104, 107, 463, 1369, 1474, 1486, 1783, 1890
BccI CCATC 6 cut(s) 642, 927, 960, 1128, 1299, 1633
BceAI ACGGC 4 cut(s) 396, 441, 1463, 2042
BciT130I CCWGG 3 cut(s) 165, 645, 1926
BciVI GTATCC 1 cut(s) 1335
BclI TGATCA 2 cut(s) 355, 1665
BcnI CCSGG 5 cut(s) 847, 1039, 1223, 1232, 2041
BcoDI GTCTC 7 cut(s) 525, 645, 890, 1586, 1698, 1926, 2017
BfaI CTAG 6 cut(s) 177, 900, 1323, 1481, 1947, 1986
BfmI CTRYAG 1 cut(s) 1560
BfoI RGCGCY 1 cut(s) 1463
BfuI GTATCC 1 cut(s) 1335
BglII AGATCT 3 cut(s) 61, 254, 312
BisI GCNGC 8 cut(s) 93, 96, 477, 1383, 1488, 1500, 1772, 1879
BlpI GCTNAGC 2 cut(s) 204, 1767
BlsI GCNGC 8 cut(s) 94, 97, 478, 1384, 1489, 1501, 1773, 1880
Bme1390I CCNGG 8 cut(s) 165, 645, 847, 1039, 1223, 1232, 1926, 2041
Bme18I GGWCC 2 cut(s) 110, 689
BmeRI GACNNNNNGTC 2 cut(s) 517, 1687
BmeT110I CYCGRG 1 cut(s) 1913
BmgT120I GGNCC 2 cut(s) 110, 689
BmiI GGNNCC 5 cut(s) 138, 579, 1516, 1644, 1737
BmrFI CCNGG 8 cut(s) 165, 645, 847, 1039, 1223, 1232, 1926, 2041
BmsI GCATC 3 cut(s) 1024, 1159, 1177
BpiI GAAGAC 2 cut(s) 1686, 1860
BplI GAGNNNNNCTC 2 cut(s) 584, 616
BpmI CTGGAG 2 cut(s) 1908, 2041
Bpu10I CCTNAGC 1 cut(s) 1542
Bpu1102I GCTNAGC 2 cut(s) 204, 1767
BpuEI CTTGAG 1 cut(s) 173
BpuMI CCSGG 5 cut(s) 847, 1039, 1223, 1232, 2041
BsaAI YACGTR 1 cut(s) 1297
BsaI GGTCTC 3 cut(s) 645, 890, 1926
BsaJI CCNNGG 8 cut(s) 431, 846, 968, 1127, 1352, 1571, 1739, 1925
BsaWI WCCGGW 1 cut(s) 1211
BsaXI ACNNNNNCTCC 4 cut(s) 643, 673, 1893, 1923
Bsc4I CCNNNNNNNGG 2 cut(s) 947, 1424
Bse118I RCCGGY 2 cut(s) 1211, 1786
Bse1I ACTGG 6 cut(s) 113, 304, 1021, 1066, 1343, 2024
Bse3DI GCAATG 2 cut(s) 622, 692
BseBI CCWGG 3 cut(s) 165, 645, 1926
BseDI CCNNGG 8 cut(s) 431, 846, 968, 1127, 1352, 1571, 1739, 1925
BseGI GGATG 9 cut(s) 160, 562, 601, 653, 919, 985, 1047, 1146, 1348
BseLI CCNNNNNNNGG 2 cut(s) 947, 1424
BseMI GCAATG 2 cut(s) 622, 692
BseNI ACTGG 6 cut(s) 113, 304, 1021, 1066, 1343, 2024
BseRI GAGGAG 2 cut(s) 513, 1983
BseSI GKGCMC 1 cut(s) 139
BseXI GCAGC 8 cut(s) 104, 107, 463, 1369, 1474, 1486, 1783, 1890
Bsh1236I CGCG 1 cut(s) 821
BshFI GGCC 4 cut(s) 456, 845, 951, 1011
BshNI GGYRCC 1 cut(s) 136
BshTI ACCGGT 1 cut(s) 1211
BsiHKAI GWGCWC 1 cut(s) 1850
BsiHKCI CYCGRG 1 cut(s) 1913
BsiSI CCGG 8 cut(s) 846, 1012, 1038, 1212, 1223, 1231, 1787, 2040
BslFI GGGAC 3 cut(s) 1169, 1589, 1895
BslI CCNNNNNNNGG 2 cut(s) 947, 1424
BsmAI GTCTC 7 cut(s) 525, 645, 890, 1586, 1698, 1926, 2017
BsmBI CGTCTC 2 cut(s) 1698, 2017
BsmFI GGGAC 3 cut(s) 1169, 1589, 1895
BsnI GGCC 4 cut(s) 456, 845, 951, 1011
Bso31I GGTCTC 3 cut(s) 645, 890, 1926
BsoBI CYCGRG 1 cut(s) 1913
Bsp1286I GDGCHC 2 cut(s) 139, 1850
Bsp1720I GCTNAGC 2 cut(s) 204, 1767
Bsp19I CCATGG 2 cut(s) 431, 1127
BspACI CCGC 8 cut(s) 395, 575, 715, 1172, 1774, 1865, 1881, 1899
BspANI GGCC 4 cut(s) 456, 845, 951, 1011
BspFNI CGCG 1 cut(s) 821
BspHI TCATGA 1 cut(s) 1453
BspLI GGNNCC 5 cut(s) 138, 579, 1516, 1644, 1737
BspPI GGATC 9 cut(s) 329, 572, 585, 815, 1274, 1408, 1509, 1522, 1641
BspT107I GGYRCC 1 cut(s) 136
BspTNI GGTCTC 3 cut(s) 645, 890, 1926
BsrDI GCAATG 2 cut(s) 622, 692
BsrFI RCCGGY 2 cut(s) 1211, 1786
BsrI ACTGG 6 cut(s) 113, 304, 1021, 1066, 1343, 2024
BssAI RCCGGY 2 cut(s) 1211, 1786
BssECI CCNNGG 8 cut(s) 431, 846, 968, 1127, 1352, 1571, 1739, 1925
BssSI CACGAG 1 cut(s) 630
BssT1I CCWWGG 5 cut(s) 431, 968, 1127, 1571, 1739
Bst2BI CACGAG 1 cut(s) 630
Bst2UI CCWGG 3 cut(s) 165, 645, 1926
Bst4CI ACNGT 2 cut(s) 197, 689
Bst6I CTCTTC 5 cut(s) 52, 282, 531, 1584, 1680
BstBAI YACGTR 1 cut(s) 1297
BstDSI CCRYGG 3 cut(s) 431, 1127, 1352
BstF5I GGATG 9 cut(s) 160, 562, 601, 653, 919, 985, 1047, 1146, 1348
BstFNI CGCG 1 cut(s) 821
BstH2I RGCGCY 1 cut(s) 1463
BstHHI GCGC 2 cut(s) 385, 1462
BstMAI GTCTC 7 cut(s) 525, 645, 890, 1586, 1698, 1926, 2017
BstMWI GCNNNNNNNGC 7 cut(s) 92, 104, 427, 626, 731, 1496, 1787
BstNI CCWGG 3 cut(s) 165, 645, 1926
BstSCI CCNGG 8 cut(s) 163, 643, 845, 1037, 1221, 1230, 1924, 2039
BstSFI CTRYAG 1 cut(s) 1560
BstSLI GKGCMC 1 cut(s) 139
BstSNI TACGTA 1 cut(s) 1297
BstUI CGCG 1 cut(s) 821
BstV1I GCAGC 8 cut(s) 104, 107, 463, 1369, 1474, 1486, 1783, 1890
BstV2I GAAGAC 2 cut(s) 1686, 1860
BstX2I RGATCY 5 cut(s) 61, 254, 312, 577, 1514
BstXI CCANNNNNNTGG 1 cut(s) 1134
BstYI RGATCY 5 cut(s) 61, 254, 312, 577, 1514
BsuI GTATCC 1 cut(s) 1335
BsuRI GGCC 4 cut(s) 456, 845, 951, 1011
BtgI CCRYGG 3 cut(s) 431, 1127, 1352
BtgZI GCGATG 2 cut(s) 1200, 1318
BtsCI GGATG 9 cut(s) 160, 562, 601, 653, 919, 985, 1047, 1146, 1348
BtsI GCAGTG 1 cut(s) 1803
BtsIMutI CAGTG 4 cut(s) 120, 297, 1803, 1848
CciI TCATGA 1 cut(s) 1453
CfoI GCGC 2 cut(s) 385, 1462
Cfr10I RCCGGY 2 cut(s) 1211, 1786
Cfr13I GGNCC 2 cut(s) 110, 689
Csp6I GTAC 6 cut(s) 234, 904, 1215, 1270, 1930, 1977
CspAI ACCGGT 1 cut(s) 1211
CviAII CATG 8 cut(s) 432, 932, 999, 1073, 1128, 1454, 1747, 2006
CviQI GTAC 6 cut(s) 234, 904, 1215, 1270, 1930, 1977
DriI GACNNNNNGTC 2 cut(s) 517, 1687
EaeI YGGCCR 1 cut(s) 949
Eam1104I CTCTTC 5 cut(s) 52, 282, 531, 1584, 1680
Eam1105I GACNNNNNGTC 2 cut(s) 517, 1687
EarI CTCTTC 5 cut(s) 52, 282, 531, 1584, 1680
Eco105I TACGTA 1 cut(s) 1297
Eco130I CCWWGG 5 cut(s) 431, 968, 1127, 1571, 1739
Eco31I GGTCTC 3 cut(s) 645, 890, 1926
Eco32I GATATC 1 cut(s) 1022
Eco47I GGWCC 2 cut(s) 110, 689
Eco47III AGCGCT 1 cut(s) 1461
Eco57I CTGAAG 2 cut(s) 1695, 1872
Eco88I CYCGRG 1 cut(s) 1913
EcoRII CCWGG 3 cut(s) 163, 643, 1924
EcoRV GATATC 1 cut(s) 1022
EcoT14I CCWWGG 5 cut(s) 431, 968, 1127, 1571, 1739
ErhI CCWWGG 5 cut(s) 431, 968, 1127, 1571, 1739
Esp3I CGTCTC 2 cut(s) 1698, 2017
FaeI CATG 8 cut(s) 435, 935, 1002, 1076, 1131, 1457, 1750, 2009
FalI AAGNNNNNCTT 6 cut(s) 1434, 1466, 1512, 1544, 1639, 1671
FaqI GGGAC 3 cut(s) 1169, 1589, 1895
FatI CATG 8 cut(s) 431, 931, 998, 1072, 1127, 1453, 1746, 2005
FbaI TGATCA 2 cut(s) 355, 1665
Fnu4HI GCNGC 8 cut(s) 93, 96, 477, 1383, 1488, 1500, 1772, 1879
FokI GGATG 9 cut(s) 147, 569, 608, 660, 906, 992, 1054, 1153, 1335
Fsp4HI GCNGC 8 cut(s) 93, 96, 477, 1383, 1488, 1500, 1772, 1879
FspBI CTAG 6 cut(s) 177, 900, 1323, 1481, 1947, 1986
GlaI GCGC 2 cut(s) 384, 1461
GluI GCNGC 8 cut(s) 93, 96, 477, 1383, 1488, 1500, 1772, 1879
GsuI CTGGAG 2 cut(s) 1908, 2041
HaeII RGCGCY 1 cut(s) 1463
HaeIII GGCC 4 cut(s) 456, 845, 951, 1011
HapII CCGG 8 cut(s) 846, 1012, 1038, 1212, 1223, 1231, 1787, 2040
HhaI GCGC 2 cut(s) 385, 1462
Hin1II CATG 8 cut(s) 435, 935, 1002, 1076, 1131, 1457, 1750, 2009
Hin6I GCGC 2 cut(s) 383, 1460
HinP1I GCGC 2 cut(s) 383, 1460
HincII GTYRAC 1 cut(s) 1753
HindII GTYRAC 1 cut(s) 1753
HindIII AAGCTT 1 cut(s) 1099
HpaI GTTAAC 1 cut(s) 1753
HpaII CCGG 8 cut(s) 846, 1012, 1038, 1212, 1223, 1231, 1787, 2040
HphI GGTGA 5 cut(s) 238, 350, 671, 1301, 1994
Hpy166II GTNNAC 1 cut(s) 1753
Hpy188I TCNGA 8 cut(s) 312, 604, 807, 1519, 1638, 1670, 1832, 1936
Hpy8I GTNNAC 1 cut(s) 1753
HpyAV CCTTC 5 cut(s) 143, 827, 1259, 1517, 1878
HpyCH4III ACNGT 2 cut(s) 197, 689
HpyCH4IV ACGT 3 cut(s) 677, 1296, 1982
HpyCH4V TGCA 6 cut(s) 620, 763, 1072, 1502, 1841, 1996
HpyF10VI GCNNNNNNNGC 7 cut(s) 92, 104, 427, 626, 731, 1496, 1787
HpySE526I ACGT 3 cut(s) 677, 1296, 1982
Hsp92II CATG 8 cut(s) 435, 935, 1002, 1076, 1131, 1457, 1750, 2009
HspAI GCGC 2 cut(s) 383, 1460
Ksp22I TGATCA 2 cut(s) 355, 1665
KspAI GTTAAC 1 cut(s) 1753
LmnI GCTCC 1 cut(s) 1561
Lsp1109I GCAGC 8 cut(s) 104, 107, 463, 1369, 1474, 1486, 1783, 1890
LweI GCATC 3 cut(s) 1024, 1159, 1177
MaeI CTAG 6 cut(s) 177, 900, 1323, 1481, 1947, 1986
MaeII ACGT 3 cut(s) 677, 1296, 1982
MaeIII GTNAC 2 cut(s) 439, 1801
MfeI CAATTG 1 cut(s) 1419
MflI RGATCY 5 cut(s) 61, 254, 312, 577, 1514
MhlI GDGCHC 2 cut(s) 139, 1850
MlsI TGGCCA 1 cut(s) 951
MluCI AATT 7 cut(s) 449, 1121, 1419, 1699, 1708, 1820, 1833
MluNI TGGCCA 1 cut(s) 951
MlyI GAGTC 7 cut(s) 527, 593, 1320, 1376, 1602, 1697, 1850
Mox20I TGGCCA 1 cut(s) 951
MroXI GAANNNNTTC 3 cut(s) 866, 989, 1148
MscI TGGCCA 1 cut(s) 951
MseI TTAA 6 cut(s) 291, 915, 1110, 1698, 1752, 1824
MslI CAYNNNNRTG 5 cut(s) 330, 1132, 1471, 1583, 1808
Msp20I TGGCCA 1 cut(s) 951
MspA1I CMGCKG 3 cut(s) 1774, 1865, 1881
MspI CCGG 8 cut(s) 846, 1012, 1038, 1212, 1223, 1231, 1787, 2040
MspR9I CCNGG 8 cut(s) 165, 645, 847, 1039, 1223, 1232, 1926, 2041
MunI CAATTG 1 cut(s) 1419
MvaI CCWGG 3 cut(s) 165, 645, 1926
MvnI CGCG 1 cut(s) 821
MwoI GCNNNNNNNGC 7 cut(s) 92, 104, 427, 626, 731, 1496, 1787
NciI CCSGG 5 cut(s) 847, 1039, 1223, 1232, 2041
NcoI CCATGG 2 cut(s) 431, 1127
NlaIII CATG 8 cut(s) 435, 935, 1002, 1076, 1131, 1457, 1750, 2009
NlaIV GGNNCC 5 cut(s) 138, 579, 1516, 1644, 1737
NmuCI GTSAC 2 cut(s) 439, 1801
OliI CACNNNNGTG 1 cut(s) 1471
PagI TCATGA 1 cut(s) 1453
PcsI WCGNNNNNNNCGW 1 cut(s) 837
PdmI GAANNNNTTC 3 cut(s) 866, 989, 1148
PfeI GAWTC 6 cut(s) 212, 862, 1535, 1813, 1868, 1999
PflMI CCANNNNNTGG 1 cut(s) 947
PfoI TCCNGGA 2 cut(s) 643, 1221
PinAI ACCGGT 1 cut(s) 1211
PkrI GCNGC 8 cut(s) 94, 97, 478, 1384, 1489, 1501, 1773, 1880
PleI GAGTC 7 cut(s) 526, 593, 1320, 1375, 1602, 1696, 1850
PpsI GAGTC 7 cut(s) 526, 593, 1320, 1375, 1602, 1696, 1850
Ppu21I YACGTR 1 cut(s) 1297
PsiI TTATAA 1 cut(s) 683
Psp1406I AACGTT 1 cut(s) 677
Psp6I CCWGG 3 cut(s) 163, 643, 1924
PspGI CCWGG 3 cut(s) 163, 643, 1924
PspN4I GGNNCC 5 cut(s) 138, 579, 1516, 1644, 1737
PspPI GGNCC 2 cut(s) 110, 689
PsuI RGATCY 5 cut(s) 61, 254, 312, 577, 1514
RsaI GTAC 6 cut(s) 235, 905, 1216, 1271, 1931, 1978
RsaNI GTAC 6 cut(s) 234, 904, 1215, 1270, 1930, 1977
RseI CAYNNNNRTG 5 cut(s) 330, 1132, 1471, 1583, 1808
SaqAI TTAA 6 cut(s) 291, 915, 1110, 1698, 1752, 1824
SatI GCNGC 8 cut(s) 93, 96, 477, 1383, 1488, 1500, 1772, 1879
Sau96I GGNCC 2 cut(s) 110, 689
SchI GAGTC 7 cut(s) 527, 593, 1320, 1376, 1602, 1697, 1850
ScrFI CCNGG 8 cut(s) 165, 645, 847, 1039, 1223, 1232, 1926, 2041
SduI GDGCHC 2 cut(s) 139, 1850
SfaNI GCATC 3 cut(s) 1024, 1159, 1177
SfcI CTRYAG 1 cut(s) 1560
SinI GGWCC 2 cut(s) 110, 689
SmiMI CAYNNNNRTG 5 cut(s) 330, 1132, 1471, 1583, 1808
SmlI CTYRAG 1 cut(s) 188
SmoI CTYRAG 1 cut(s) 188
SnaBI TACGTA 1 cut(s) 1297
Sse9I AATT 7 cut(s) 449, 1121, 1419, 1699, 1708, 1820, 1833
SsiI CCGC 8 cut(s) 395, 575, 715, 1172, 1774, 1865, 1881, 1899
SspMI CTAG 6 cut(s) 177, 900, 1323, 1481, 1947, 1986
StyD4I CCNGG 8 cut(s) 163, 643, 845, 1037, 1221, 1230, 1924, 2039
StyI CCWWGG 5 cut(s) 431, 968, 1127, 1571, 1739
TaaI ACNGT 2 cut(s) 197, 689
TaiI ACGT 3 cut(s) 680, 1299, 1985
TaqI TCGA 3 cut(s) 400, 1032, 1392
TasI AATT 7 cut(s) 449, 1121, 1419, 1699, 1708, 1820, 1833
TatI WGTACW 1 cut(s) 1976
TfiI GAWTC 6 cut(s) 212, 862, 1535, 1813, 1868, 1999
Tru1I TTAA 6 cut(s) 291, 915, 1110, 1698, 1752, 1824
Tru9I TTAA 6 cut(s) 291, 915, 1110, 1698, 1752, 1824
TscAI CASTG 4 cut(s) 120, 304, 1810, 1855
TseFI GTSAC 2 cut(s) 439, 1801
TseI GCWGC 8 cut(s) 92, 95, 476, 1382, 1487, 1499, 1771, 1878
Tsp45I GTSAC 2 cut(s) 439, 1801
TspDTI ATGAA 7 cut(s) 462, 785, 948, 1157, 1442, 1470, 2022
TspGWI ACGGA 4 cut(s) 1014, 1341, 1360, 1527
TspRI CASTG 4 cut(s) 120, 304, 1810, 1855
Van91I CCANNNNNTGG 1 cut(s) 947
VpaK11BI GGWCC 2 cut(s) 110, 689
XapI RAATTY 2 cut(s) 1708, 1820
XbaI TCTAGA 1 cut(s) 1322
XmnI GAANNNNTTC 3 cut(s) 866, 989, 1148
XspI CTAG 6 cut(s) 177, 900, 1323, 1481, 1947, 1986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.