Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002479

Physical Location & Seq

Genomic Coordinates Forward (+)

33452407 .. 33457035

Gene Structure 4629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0323900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGATCTACCCGGCGGTGCTGCTCATTCATTTGAGATTAAAGGCTTTCAATTTGACTCCGGCCCATCTTTGTTCTCTGGTTTTCAATCCAAAGGCCCTCAGGCCAATCCTCTTGGACAAGTTCTGGATGCATTGGGTGAGACAATTCCTTGTGCCAGTTATGATTCATGGATGGTCTACCTACCTGAAGGACCTTGAGAAGTATGCAAGTGCAAATGCTGTTCAAGAATGGAAAAAGCTTTTGGATGCCATTCTTCCAATGTCTGCAGCTGCAATGGCTCTGCCTCCACTTTCTATCCGAGGGGATTTGGGTGTTCTTTCTACTGCTGGAGCTAGATATACTCCCTCTCTATTAAAATCTTTTGCTCAAATGGGACCTAAGGGAGCGCTTGGTGCCACAAAGCTACTAAGACCATTTTCAGAAATCATGGACTCATTAGAACTGAAAGATCCCTTTATACGTAATTGGGTGGATCTACTGGCTTTCTTGCTTGCTGGGGTGAAATCTAATGGTATACTTTCAGCAGAGATGGTTTATATGTTTGCGGAGTGGTATAAGCCAGGTTGCTGTCTTGAATACCCTCTTCATGGAAGTGGTGCAGTTGTTGAAGCTCTTGTTCGGGGAATGAAGAAGTTTGGTGGAAGGATTTCTTTAGGAAGTCATGTGGAAAAAATTGTTGTTGAAAACGGTCGAGCCACTGGGGTCAAGCTAAGAAGTGGACAATTTATACGTGCTAAGAAGGCTGTTGTTAGTAATGCATCTATGTGGGACACTCTAAATCTATTACCTAAAGAAGTTGTTCCAAAGTCATACGAGAAAAGGATTGAGATGACCCCTCAATGTGAATCCTTCATGCATCTTCATTTGGGATTTGATGCTGAGTGTACGCATAAAGACTTGGGAATTCATCATATAGTTGTCAATGATTGGGATAGAGGGGTTGATGCTGACCAGAATGTTGTTTTGATATCTGTACCAAGTGTACTAAGTCCGGATCTGGCACCACCTGGGAAACATGTCTTGCATGCCTATCTTCCAGGAACTGAACCCTTTGATTTGTGGAAAGGATTGGACCGTAAAAGTACTGCATACAAAGAGCTCAAAGCTGAAAGATCTGAGGTTATGTGGAGAGCTGTGGAGCGGGCACTTGGTCCTGGGTTTAGCCGTGAAAAATGCGAGGTCAAGTTAGTTGGTTCTCCATTGACGCATCAAAGATTTCTTCGAAGGAACCGAGGAACATACGGGCCAGCAGTAGAAGCTGGTAAAGACTCTATTCCTGGGCACTCCACTCCGATTCCTCAACTTTATTGCTGTGGAGATTCTACTTTTCCTGGCATTGGAGTCCCTGCAGTTGCTGCTAGTGGTGCCATTGTTGCCAATTCACTAGTTTCTGTTGCTCAACACTCTCAACTTCTTGATGCAATTGGAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009751 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048580 GO:0048581 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901332 GO:1901363 GO:1901700 GO:1903506 GO:2000023 GO:2000026 GO:2000069 GO:2000112 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

477

Amino Acids

52.44

Weight (kDa)

9.15

Isoelectric Point (pI)

35.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amino_oxidase	PF01593	161 - 460	2.2e-12	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22370
fragaria_vesca	FvH4_5g37300 FvH4_5g37300 FvH4_5g37300
malus_domestica	MD15G1369800.v1.1
prunus_persica	Prupe.1G517500_v2.0.a1 Prupe.1G517500_v2.0.a1 Prupe.1G518900_v2.0.a1 Prupe.1G518900_v2.0.a1 Prupe.1G518900_v2.0.a1
pyrus_communis	pycom15g33090
rosa_chinensis	RchiOBHm_Chr5g0034471 RchiOBHm_Chr5g0038311 RchiOBHm_Chr7g0238871 RchiOBHm_Chr7g0238911
rosa_laevigata	RLG00000000798 RLG00000033846
rosa_multiflora	Rmu_sc0000764.1_g000001 Rmu_sc0004132.1_g000018 Rmu_sc0005542.1_g000003 Rmu_sc0007101.1_g000002
rosa_roxburghii	Rroxscaffold_1G00042690 Rroxscaffold_3G00221500
rosa_rugosa	Rorug05G0194800 Rorug05G0194800 Rorug05G0194800 Rorug05G0194900 Rorug07G0323900 Rorug07G0323900
rosa_samantha	Rh5AG238300 Rh5AG259300 Rh5BG263100 Rh5CG269100 Rh5CG317600 Rh5DG246600 Rh5DG272100 Rh7AG478400 Rh7BG450900
rosa_wichuraiana	Rw5G021760 Rw5G024270 Rw7G039940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	392, 1000, 1364
AccBSI	CCGCTC	1 cut(s)	1141
AccI	GTMKAC	2 cut(s)	176, 514
AccIII	TCCGGA	1 cut(s)	991
AciI	CCGC	3 cut(s)	14, 545, 1141
AclWI	GGATC	3 cut(s)	443, 480, 1002
AcsI	RAATTY	1 cut(s)	903
AcuI	CTGAAG	1 cut(s)	206
AfaI	GTAC	4 cut(s)	886, 975, 984, 1084
AfeI	AGCGCT	1 cut(s)	387
AfiI	CCNNNNNNNGG	2 cut(s)	587, 1337
AflIII	ACRYGT	1 cut(s)	1015
AgsI	TTSAA	6 cut(s)	49, 85, 224, 575, 608, 683
AhlI	ACTAGT	1 cut(s)	1384
AjnI	CCWGG	6 cut(s)	559, 1006, 1036, 1153, 1276, 1330
AjuI	GAANNNNNNNTTGG	2 cut(s)	224, 256
Alw21I	GWGCWC	1 cut(s)	1101
Alw26I	GTCTC	1 cut(s)	133
AlwI	GGATC	3 cut(s)	443, 480, 1002
AlwNI	CAGNNNCTG	2 cut(s)	1043, 1355
Aor13HI	TCCGGA	1 cut(s)	991
Aor51HI	AGCGCT	1 cut(s)	387
AoxI	GGCC	4 cut(s)	60, 93, 101, 1244
ApeKI	GCWGC	4 cut(s)	19, 266, 269, 1355
ApoI	RAATTY	1 cut(s)	903
Asp700I	GAANNNNTTC	2 cut(s)	646, 798
AspLEI	GCGC	1 cut(s)	388
AspS9I	GGNCC	7 cut(s)	61, 94, 190, 374, 1072, 1151, 1244
AsuC2I	CCSGG	1 cut(s)	11
AsuHPI	GGTGA	2 cut(s)	148, 511
AsuII	TTCGAA	1 cut(s)	1222
AvaII	GGWCC	4 cut(s)	190, 374, 1072, 1151
AxyI	CCTNAGG	2 cut(s)	98, 378
BaeGI	GKGCMC	2 cut(s)	1147, 1284
BanI	GGYRCC	3 cut(s)	392, 1000, 1364
BanII	GRGCYC	1 cut(s)	1101
Bbv12I	GWGCWC	1 cut(s)	1101
BbvI	GCAGC	4 cut(s)	6, 256, 278, 1342
BccI	CCATC	3 cut(s)	72, 165, 523
BceAI	ACGGC	1 cut(s)	1149
BciT130I	CCWGG	6 cut(s)	561, 1008, 1038, 1155, 1278, 1332
BcnI	CCSGG	1 cut(s)	11
BcoDI	GTCTC	1 cut(s)	133
BcuI	ACTAGT	1 cut(s)	1384
BfaI	CTAG	3 cut(s)	333, 1359, 1385
BfmI	CTRYAG	2 cut(s)	264, 1347
BfoI	RGCGCY	1 cut(s)	389
BglII	AGATCT	1 cut(s)	1112
BisI	GCNGC	4 cut(s)	20, 267, 270, 1356
BlsI	GCNGC	4 cut(s)	21, 268, 271, 1357
BmcAI	AGTACT	1 cut(s)	1084
Bme1390I	CCNGG	7 cut(s)	11, 561, 1008, 1038, 1155, 1278, 1332
Bme18I	GGWCC	4 cut(s)	190, 374, 1072, 1151
BmgT120I	GGNCC	7 cut(s)	61, 94, 190, 374, 1072, 1151, 1244
BmiI	GGNNCC	5 cut(s)	375, 394, 1002, 1229, 1366
BmrFI	CCNGG	7 cut(s)	11, 561, 1008, 1038, 1155, 1278, 1332
BmrI	ACTGGG	1 cut(s)	708
BmsI	GCATC	8 cut(s)	117, 235, 767, 865, 865, 934, 1216, 1408
BmuI	ACTGGG	1 cut(s)	708
BpmI	CTGGAG	1 cut(s)	348
Bpu14I	TTCGAA	1 cut(s)	1222
BpuEI	CTTGAG	1 cut(s)	215
BpuMI	CCSGG	1 cut(s)	11
BsaAI	YACGTR	2 cut(s)	461, 731
BsaJI	CCNNGG	5 cut(s)	298, 1007, 1154, 1231, 1277
BsaWI	WCCGGW	1 cut(s)	991
Bsc4I	CCNNNNNNNGG	2 cut(s)	587, 1337
Bse1I	ACTGG	3 cut(s)	155, 483, 703
Bse21I	CCTNAGG	2 cut(s)	98, 378
Bse3DI	GCAATG	1 cut(s)	279
BseAI	TCCGGA	1 cut(s)	991
BseBI	CCWGG	6 cut(s)	561, 1008, 1038, 1155, 1278, 1332
BseDI	CCNNGG	5 cut(s)	298, 1007, 1154, 1231, 1277
BseGI	GGATG	3 cut(s)	132, 176, 250
BseLI	CCNNNNNNNGG	2 cut(s)	587, 1337
BseMI	GCAATG	1 cut(s)	279
BseMII	CTCAG	3 cut(s)	112, 870, 1107
BseNI	ACTGG	3 cut(s)	155, 483, 703
BseSI	GKGCMC	2 cut(s)	1147, 1284
BseXI	GCAGC	4 cut(s)	6, 256, 278, 1342
BseYI	CCCAGC	1 cut(s)	494
BsgI	GTGCAG	1 cut(s)	618
Bsh1285I	CGRYCG	1 cut(s)	691
BshFI	GGCC	4 cut(s)	62, 95, 103, 1246
BshNI	GGYRCC	3 cut(s)	392, 1000, 1364
BsiEI	CGRYCG	1 cut(s)	691
BsiHKAI	GWGCWC	1 cut(s)	1101
BsiSI	CCGG	3 cut(s)	11, 59, 992
BslFI	GGGAC	3 cut(s)	387, 782, 1328
BslI	CCNNNNNNNGG	2 cut(s)	587, 1337
BsmAI	GTCTC	1 cut(s)	133
BsmFI	GGGAC	3 cut(s)	387, 782, 1328
BsnI	GGCC	4 cut(s)	62, 95, 103, 1246
Bsp119I	TTCGAA	1 cut(s)	1222
Bsp1286I	GDGCHC	3 cut(s)	1101, 1147, 1284
Bsp13I	TCCGGA	1 cut(s)	991
Bsp143I	GATC	5 cut(s)	3, 448, 472, 994, 1112
BspACI	CCGC	3 cut(s)	14, 545, 1141
BspANI	GGCC	4 cut(s)	62, 95, 103, 1246
BspCNI	CTCAG	3 cut(s)	111, 871, 1108
BspEI	TCCGGA	1 cut(s)	991
BspLI	GGNNCC	5 cut(s)	375, 394, 1002, 1229, 1366
BspMAI	CTGCAG	2 cut(s)	268, 1351
BspPI	GGATC	3 cut(s)	443, 480, 1002
BspT104I	TTCGAA	1 cut(s)	1222
BspT107I	GGYRCC	3 cut(s)	392, 1000, 1364
BsrBI	CCGCTC	1 cut(s)	1141
BsrDI	GCAATG	1 cut(s)	279
BsrI	ACTGG	3 cut(s)	155, 483, 703
BssECI	CCNNGG	5 cut(s)	298, 1007, 1154, 1231, 1277
BssMI	GATC	5 cut(s)	3, 448, 472, 994, 1112
BssNAI	GTATAC	1 cut(s)	515
Bst1107I	GTATAC	1 cut(s)	515
Bst2UI	CCWGG	6 cut(s)	561, 1008, 1038, 1155, 1278, 1332
Bst4CI	ACNGT	2 cut(s)	689, 1076
Bst6I	CTCTTC	1 cut(s)	588
BstAPI	GCANNNNNTGC	1 cut(s)	1355
BstBAI	YACGTR	2 cut(s)	461, 731
BstBI	TTCGAA	1 cut(s)	1222
BstC8I	GCNNGC	4 cut(s)	492, 1026, 1143, 1248
BstDEI	CTNAG	8 cut(s)	98, 378, 407, 710, 735, 879, 986, 1116
BstF5I	GGATG	3 cut(s)	132, 176, 250
BstH2I	RGCGCY	1 cut(s)	389
BstHHI	GCGC	1 cut(s)	388
BstKTI	GATC	5 cut(s)	6, 451, 475, 997, 1115
BstMAI	GTCTC	1 cut(s)	133
BstMBI	GATC	5 cut(s)	3, 448, 472, 994, 1112
BstMCI	CGRYCG	1 cut(s)	691
BstMWI	GCNNNNNNNGC	7 cut(s)	275, 392, 740, 1256, 1355, 1364, 1373
BstNI	CCWGG	6 cut(s)	561, 1008, 1038, 1155, 1278, 1332
BstNSI	RCATGY	2 cut(s)	1019, 1028
BstSCI	CCNGG	7 cut(s)	9, 559, 1006, 1036, 1153, 1276, 1330
BstSFI	CTRYAG	2 cut(s)	264, 1347
BstSLI	GKGCMC	2 cut(s)	1147, 1284
BstSNI	TACGTA	1 cut(s)	461
BstV1I	GCAGC	4 cut(s)	6, 256, 278, 1342
BstX2I	RGATCY	4 cut(s)	448, 472, 994, 1112
BstYI	RGATCY	4 cut(s)	448, 472, 994, 1112
BstZ17I	GTATAC	1 cut(s)	515
Bsu36I	CCTNAGG	2 cut(s)	98, 378
BsuRI	GGCC	4 cut(s)	62, 95, 103, 1246
BtsCI	GGATG	3 cut(s)	132, 176, 250
BtsIMutI	CAGTG	1 cut(s)	696
Cac8I	GCNNGC	4 cut(s)	492, 1026, 1143, 1248
CaiI	CAGNNNCTG	2 cut(s)	1043, 1355
CfoI	GCGC	1 cut(s)	388
Cfr13I	GGNCC	7 cut(s)	61, 94, 190, 374, 1072, 1151, 1244
CseI	GACGC	1 cut(s)	1213
Csp6I	GTAC	4 cut(s)	885, 974, 983, 1083
CviAII	CATG	7 cut(s)	167, 427, 587, 662, 853, 1016, 1025
CviQI	GTAC	4 cut(s)	885, 974, 983, 1083
DdeI	CTNAG	8 cut(s)	98, 378, 407, 710, 735, 879, 986, 1116
DpnI	GATC	5 cut(s)	5, 450, 474, 996, 1114
DpnII	GATC	5 cut(s)	3, 448, 472, 994, 1112
Eam1104I	CTCTTC	1 cut(s)	588
EarI	CTCTTC	1 cut(s)	588
Ecl136II	GAGCTC	1 cut(s)	1099
Eco105I	TACGTA	1 cut(s)	461
Eco24I	GRGCYC	1 cut(s)	1101
Eco32I	GATATC	1 cut(s)	969
Eco47I	GGWCC	4 cut(s)	190, 374, 1072, 1151
Eco47III	AGCGCT	1 cut(s)	387
Eco53kI	GAGCTC	1 cut(s)	1099
Eco57I	CTGAAG	1 cut(s)	206
Eco81I	CCTNAGG	2 cut(s)	98, 378
EcoICRI	GAGCTC	1 cut(s)	1099
EcoO109I	RGGNCCY	3 cut(s)	94, 190, 374
EcoRI	GAATTC	1 cut(s)	903
EcoRII	CCWGG	6 cut(s)	559, 1006, 1036, 1153, 1276, 1330
EcoRV	GATATC	1 cut(s)	969
EcoT22I	ATGCAT	3 cut(s)	132, 760, 858
EcoT38I	GRGCYC	1 cut(s)	1101
FaeI	CATG	7 cut(s)	170, 430, 590, 665, 856, 1019, 1028
FalI	AAGNNNNNCTT	2 cut(s)	634, 666
FaqI	GGGAC	3 cut(s)	387, 782, 1328
FatI	CATG	7 cut(s)	166, 426, 586, 661, 852, 1015, 1024
FauI	CCCGC	1 cut(s)	1134
FblI	GTMKAC	2 cut(s)	176, 514
Fnu4HI	GCNGC	4 cut(s)	20, 267, 270, 1356
FokI	GGATG	3 cut(s)	139, 183, 257
FriOI	GRGCYC	1 cut(s)	1101
Fsp4HI	GCNGC	4 cut(s)	20, 267, 270, 1356
FspBI	CTAG	3 cut(s)	333, 1359, 1385
GlaI	GCGC	1 cut(s)	387
GluI	GCNGC	4 cut(s)	20, 267, 270, 1356
GsaI	CCCAGC	1 cut(s)	498
GsuI	CTGGAG	1 cut(s)	348
HaeII	RGCGCY	1 cut(s)	389
HaeIII	GGCC	4 cut(s)	62, 95, 103, 1246
HapII	CCGG	3 cut(s)	11, 59, 992
HgaI	GACGC	1 cut(s)	1213
HhaI	GCGC	1 cut(s)	388
Hin1II	CATG	7 cut(s)	170, 430, 590, 665, 856, 1019, 1028
Hin6I	GCGC	1 cut(s)	386
HinP1I	GCGC	1 cut(s)	386
HindIII	AAGCTT	1 cut(s)	236
HinfI	GANTC	9 cut(s)	55, 163, 431, 845, 1268, 1294, 1319, 1341, 1428
HpaII	CCGG	3 cut(s)	11, 59, 992
HphI	GGTGA	2 cut(s)	148, 511
Hpy166II	GTNNAC	5 cut(s)	177, 515, 719, 885, 983
Hpy188I	TCNGA	5 cut(s)	299, 421, 1117, 1293, 1433
Hpy188III	TCNNGA	5 cut(s)	124, 224, 572, 992, 1415
Hpy8I	GTNNAC	5 cut(s)	177, 515, 719, 885, 983
HpyAV	CCTTC	5 cut(s)	181, 636, 733, 859, 1218
HpyCH4III	ACNGT	2 cut(s)	689, 1076
HpyCH4IV	ACGT	2 cut(s)	460, 730
HpyF10VI	GCNNNNNNNGC	7 cut(s)	275, 392, 740, 1256, 1355, 1364, 1373
HpyF3I	CTNAG	8 cut(s)	98, 378, 407, 710, 735, 879, 986, 1116
HpySE526I	ACGT	2 cut(s)	460, 730
Hsp92II	CATG	7 cut(s)	170, 430, 590, 665, 856, 1019, 1028
HspAI	GCGC	1 cut(s)	386
Kpn2I	TCCGGA	1 cut(s)	991
Kzo9I	GATC	5 cut(s)	3, 448, 472, 994, 1112
LmnI	GCTCC	3 cut(s)	329, 383, 1138
Lsp1109I	GCAGC	4 cut(s)	6, 256, 278, 1342
LweI	GCATC	8 cut(s)	117, 235, 767, 865, 865, 934, 1216, 1408
MaeI	CTAG	3 cut(s)	333, 1359, 1385
MaeII	ACGT	2 cut(s)	460, 730
MalI	GATC	5 cut(s)	5, 450, 474, 996, 1114
MbiI	CCGCTC	1 cut(s)	1141
MboI	GATC	5 cut(s)	3, 448, 472, 994, 1112
MboII	GAAGA	6 cut(s)	245, 575, 640, 851, 1025, 1211
MfeI	CAATTG	1 cut(s)	1422
MflI	RGATCY	4 cut(s)	448, 472, 994, 1112
MhlI	GDGCHC	3 cut(s)	1101, 1147, 1284
MluCI	AATT	8 cut(s)	49, 143, 463, 672, 722, 903, 1378, 1422
MlyI	GAGTC	4 cut(s)	49, 425, 1262, 1350
Mph1103I	ATGCAT	3 cut(s)	132, 760, 858
MroI	TCCGGA	1 cut(s)	991
MroXI	GAANNNNTTC	2 cut(s)	646, 798
MseI	TTAA	2 cut(s)	38, 353
MslI	CAYNNNNRTG	2 cut(s)	591, 763
MspA1I	CMGCKG	1 cut(s)	269
MspI	CCGG	3 cut(s)	11, 59, 992
MspR9I	CCNGG	7 cut(s)	11, 561, 1008, 1038, 1155, 1278, 1332
MunI	CAATTG	1 cut(s)	1422
MvaI	CCWGG	6 cut(s)	561, 1008, 1038, 1155, 1278, 1332
MwoI	GCNNNNNNNGC	7 cut(s)	275, 392, 740, 1256, 1355, 1364, 1373
NciI	CCSGG	1 cut(s)	11
NdeII	GATC	5 cut(s)	3, 448, 472, 994, 1112
NlaIII	CATG	7 cut(s)	170, 430, 590, 665, 856, 1019, 1028
NlaIV	GGNNCC	5 cut(s)	375, 394, 1002, 1229, 1366
NsiI	ATGCAT	3 cut(s)	132, 760, 858
NspI	RCATGY	2 cut(s)	1019, 1028
NspV	TTCGAA	1 cut(s)	1222
PaeI	GCATGC	1 cut(s)	1028
PciI	ACATGT	1 cut(s)	1015
PcsI	WCGNNNNNNNCGW	1 cut(s)	1228
PdmI	GAANNNNTTC	2 cut(s)	646, 798
PfeI	GAWTC	5 cut(s)	163, 845, 1294, 1319, 1428
PfoI	TCCNGGA	1 cut(s)	1036
PkrI	GCNGC	4 cut(s)	21, 268, 271, 1357
PleI	GAGTC	4 cut(s)	49, 425, 1262, 1349
PpsI	GAGTC	4 cut(s)	49, 425, 1262, 1349
Ppu21I	YACGTR	2 cut(s)	461, 731
PpuMI	RGGWCCY	2 cut(s)	190, 374
PscI	ACATGT	1 cut(s)	1015
Psp124BI	GAGCTC	1 cut(s)	1101
Psp5II	RGGWCCY	2 cut(s)	190, 374
Psp6I	CCWGG	6 cut(s)	559, 1006, 1036, 1153, 1276, 1330
PspFI	CCCAGC	1 cut(s)	494
PspGI	CCWGG	6 cut(s)	559, 1006, 1036, 1153, 1276, 1330
PspN4I	GGNNCC	5 cut(s)	375, 394, 1002, 1229, 1366
PspPI	GGNCC	7 cut(s)	61, 94, 190, 374, 1072, 1151, 1244
PspPPI	RGGWCCY	2 cut(s)	190, 374
PstI	CTGCAG	2 cut(s)	268, 1351
PstNI	CAGNNNCTG	2 cut(s)	1043, 1355
PsuI	RGATCY	4 cut(s)	448, 472, 994, 1112
PvuII	CAGCTG	1 cut(s)	269
RsaI	GTAC	4 cut(s)	886, 975, 984, 1084
RsaNI	GTAC	4 cut(s)	885, 974, 983, 1083
RseI	CAYNNNNRTG	2 cut(s)	591, 763
SacI	GAGCTC	1 cut(s)	1101
SaqAI	TTAA	2 cut(s)	38, 353
SatI	GCNGC	4 cut(s)	20, 267, 270, 1356
Sau3AI	GATC	5 cut(s)	3, 448, 472, 994, 1112
Sau96I	GGNCC	7 cut(s)	61, 94, 190, 374, 1072, 1151, 1244
ScaI	AGTACT	1 cut(s)	1084
SchI	GAGTC	4 cut(s)	49, 425, 1262, 1350
ScrFI	CCNGG	7 cut(s)	11, 561, 1008, 1038, 1155, 1278, 1332
SduI	GDGCHC	3 cut(s)	1101, 1147, 1284
SfaNI	GCATC	8 cut(s)	117, 235, 767, 865, 865, 934, 1216, 1408
SfcI	CTRYAG	2 cut(s)	264, 1347
SfuI	TTCGAA	1 cut(s)	1222
SinI	GGWCC	4 cut(s)	190, 374, 1072, 1151
SmiMI	CAYNNNNRTG	2 cut(s)	591, 763
SmlI	CTYRAG	1 cut(s)	194
SmoI	CTYRAG	1 cut(s)	194
SnaBI	TACGTA	1 cut(s)	461
SpeI	ACTAGT	1 cut(s)	1384
SphI	GCATGC	1 cut(s)	1028
Sse9I	AATT	8 cut(s)	49, 143, 463, 672, 722, 903, 1378, 1422
SsiI	CCGC	3 cut(s)	14, 545, 1141
SspMI	CTAG	3 cut(s)	333, 1359, 1385
SstI	GAGCTC	1 cut(s)	1101
StyD4I	CCNGG	7 cut(s)	9, 559, 1006, 1036, 1153, 1276, 1330
TaaI	ACNGT	2 cut(s)	689, 1076
TaiI	ACGT	2 cut(s)	463, 733
TaqI	TCGA	2 cut(s)	691, 1222
TasI	AATT	8 cut(s)	49, 143, 463, 672, 722, 903, 1378, 1422
TatI	WGTACW	2 cut(s)	982, 1082
TfiI	GAWTC	5 cut(s)	163, 845, 1294, 1319, 1428
Tru1I	TTAA	2 cut(s)	38, 353
Tru9I	TTAA	2 cut(s)	38, 353
TscAI	CASTG	1 cut(s)	703
TseI	GCWGC	4 cut(s)	19, 266, 269, 1355
TspDTI	ATGAA	7 cut(s)	17, 155, 575, 641, 841, 851, 896
TspRI	CASTG	1 cut(s)	703
VpaK11BI	GGWCC	4 cut(s)	190, 374, 1072, 1151
XapI	RAATTY	1 cut(s)	903
XceI	RCATGY	2 cut(s)	1019, 1028
XmiI	GTMKAC	2 cut(s)	176, 514
XmnI	GAANNNNTTC	2 cut(s)	646, 798
XspI	CTAG	3 cut(s)	333, 1359, 1385
ZrmI	AGTACT	1 cut(s)	1084
Zsp2I	ATGCAT	3 cut(s)	132, 760, 858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.