pycom08g15710

Blue/Ultraviolet sensing protein C terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0014599
Physical Location & Seq
Forward (+)
15468044 .. 15472622
4579 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g15710.4

Sequence Viewer

Length: 2070 bp
ATGTCCATATGGTATAATATGTTTTGGAGATGTCAGGTGGTGGTTGCAGTGTGGTTTGGTTCAGGAGAGATCCTGAGGGTTGAAGATAACCCAGCTTTGGCAGCTGCAGTGAGAGCAGGAGGTGTGGTTTGTGTCTTCATCTGGGCTCCTGAGGAGGAAGGCCCTTTTTATCCTGGAAGGGTTTCGAGATGGTGGCTAAAACACAGCTTGGCTCATCTTGATTCCTCCCTGAAAAATCTTGGCACTTCTCTCATCACCAAAAGATCCAATGACAGTGTTTCTTCTCTCCTTGAAGTTGTTGTTTCCACTGGTGCCACTCAGCTTTTCTTCAACCACTTATATGATCCTATATCACTGGTTAGGGATCACCGGGCGAAGGAGGTTCTGACTGCTCAAGGTATAGCTGTGCGCTCCTTTAATGCGGATTTGCTCTACGAACCATGGGATGTTAATGATGTCCATGATCGCCCGTTCACAACCTTTGATGCCTTTTGGGGAAGATGTCTTAGCATGCCATATGACCCGGATGCGCCACTTCTCCCCCCTAAGAGAATTATTTCAGGTGATGTATCAAGGTGCCCTTCTGATACATTGGTTTTTGAAGATGAATCCGAGAAGGGAAGTAATGCACTTCTTGCTCGAGCATGGTCACCTGGGTGGAGTAATGCTGATAAGGCTCTGACCACATTTATAAATGGACCCTTGCTTGATTACTCTTATAACCGCAGAAAGGCTGATGGTGCTACAACATCATTACTTTCTCCCCATTTGCATTTTGGGGAGGTGAGTGTGAGAAAAGCATTTCATCTTGCTCGCATGAAGCAGGTTCTTTGGGCCAATGAAGGCAACAAGGCTGGTGAAGAGAGCGTAAACCTGTTTCTGAAGTCTATCGGTCTTCGGGAATATTCAAGATACATTAGTTTCAATCATCCTTACAGTCATGAAAGACCTCTTCTTGGGCACCTAAAGTTCTTCCCCTGGGTTGTAAATCAGAACTACTTTAAGGCATGGAGACAAGGTAGAACTGGCTATCCATTGGTGGATGCTGGCATGAGAGAGTTGTGGGCTACTGGCTGGCTGCATGATCGAATACGAGTAGTAGTTTCTAGTTTCTTCGTAAAGGTTCTCCAACTTCCATGGAGGTGGGGAATGAAGTATTTCTGGGATACACTTTTAGATGCTGACCTTGAAAGTGATGCTCTTGGCTGGCAGTATATATCTGGTACTATCCCTGATGGCCGTGAATTTGACCGCATAGATAATCCCCAGTTTGAGGGTTACAAGTTTGATCCAAATGGAGAATATGTGCGGAAGTGGCTTCCTGAACTTGCTAGGCTACCAACTGAATGGATACACCACCCATGGAATGCACCAGAATCTGTACTCCAAGCAGCTGGAATTGAATTAGGATCAAATTACCCTCTCCCTATTGTAGGAATAGATGCAGCAAAAACCCGGTTGCAAGAAGCTTTATCAGAGATGTGGCAGCACGAAGCTGCTTCAAGAGCTGCTGTTGAAAATGGGACTGAAGAAGGGCTTGGAGACTCCTCTGAATCAGTGCCAATTGCCTTTCCTCAAGACATACAAATGGAGGAAAATAATGAACCAGCGAGGAACAACCCTCCTGGCACTCGAAGGTATGAGGATCAGATGGTCCCAAGCATTACTACTTCTTTGGCTAGAGCTGAAGAGGAAGAAACCTCTTTGGAACTTCAAAATTTAACAGAAGAAACCAGAGCAGAAGTGCCTACAGATTTAATTGTGAATCAGGAACCAAGAAGAGACATGTTAAACCAAGGGGTTTTTCAGACTACTCATAACAATGCTCTTCCACCACCCAATGCTGCAATAGGGATGCAACACGCTGTTGAAGATTCGACTGCAGAATCTTCCAGTAGCACTAGGCGAGAGAGGGATGGAGGTGTAGTTCCAGTTTGGTCTCCTTCAAGTTCTAGCTACGCAGAGCAGTTTGGGAGTGAAGACAATAGCATTGGAACAAGTTCGTACTTGCAGAGACATCCTCAGTCTCACCAAATAATGAATTGGAGGCGGCTATCTCAAACTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000302 GO:0000304 GO:0001101 GO:0001558 GO:0002682 GO:0002684 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006464 GO:0006468 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0007623 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0009117 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009639 GO:0009640 GO:0009642 GO:0009644 GO:0009645 GO:0009646 GO:0009719 GO:0009725 GO:0009785 GO:0009791 GO:0009812 GO:0009881 GO:0009882 GO:0009888 GO:0009914 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010073 GO:0010075 GO:0010112 GO:0010114 GO:0010117 GO:0010118 GO:0010218 GO:0010244 GO:0010310 GO:0010343 GO:0010359 GO:0010617 GO:0010817 GO:0012501 GO:0014070 GO:0016301 GO:0016310 GO:0016604 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019222 GO:0019538 GO:0019637 GO:0019725 GO:0022603 GO:0022604 GO:0022898 GO:0023052 GO:0030003 GO:0030522 GO:0030554 GO:0031323 GO:0031347 GO:0031349 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035639 GO:0035690 GO:0036094 GO:0036211 GO:0036473 GO:0038023 GO:0040008 GO:0042221 GO:0042440 GO:0042493 GO:0042592 GO:0042726 GO:0042752 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043269 GO:0043270 GO:0043412 GO:0043900 GO:0043902 GO:0044070 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046283 GO:0046483 GO:0046777 GO:0048037 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050660 GO:0050662 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051049 GO:0051050 GO:0051093 GO:0051128 GO:0051179 GO:0051186 GO:0051193 GO:0051234 GO:0051239 GO:0051241 GO:0051480 GO:0051510 GO:0051606 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055086 GO:0055114 GO:0060089 GO:0060918 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070887 GO:0071000 GO:0071214 GO:0071452 GO:0071478 GO:0071482 GO:0071483 GO:0071496 GO:0071704 GO:0071949 GO:0072387 GO:0072503 GO:0072507 GO:0080134 GO:0097159 GO:0097367 GO:0097468 GO:0098771 GO:0099402 GO:0104004 GO:0140096 GO:1900424 GO:1900426 GO:1900618 GO:1901265 GO:1901332 GO:1901360 GO:1901363 GO:1901371 GO:1901529 GO:1901564 GO:1901672 GO:1901700 GO:1901701 GO:1902347 GO:1902446 GO:1902448 GO:1903793 GO:1903959 GO:1903961 GO:1905421 GO:2000023 GO:2000024 GO:2000026 GO:2000030 GO:2000069 GO:2000280 GO:2000377
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
Cryptochrome_C DNA_photolyase FAD_binding_7

Protein Analysis

690

Amino Acids

77.92

Weight (kDa)

5.34

Isoelectric Point (pI)

49.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014599)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08920
fragaria_vesca FvH4_5g37290 FvH4_5g37290
malus_domestica MD00G1201600.v1.1 MD15G1369900.v1.1
prunus_persica Prupe.1G517600_v2.0.a1
pyrus_communis pycom08g15710 pycom15g33100
rosa_chinensis RchiOBHm_Chr7g0238851
rosa_laevigata RLG00000000800
rosa_multiflora Rmu_sc0007101.1_g000007
rosa_roxburghii Rroxscaffold_3G00221540
rosa_rugosa Rorug07G0323900
rosa_samantha Rh7AG478000 Rh7CG495900 Rh7DG463200
rosa_wichuraiana Rw7G039930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 692, 720
Acc36I ACCTGC 1 cut(s) 814
AccB1I GGYRCC 3 cut(s) 311, 576, 960
AciI CCGC 5 cut(s) 422, 724, 1252, 1309, 2050
AclWI GGATC 7 cut(s) 64, 258, 338, 372, 1283, 1417, 1653
AcoI YGGCCR 1 cut(s) 1237
AcsI RAATTY 2 cut(s) 1244, 1717
AcuI CTGAAG 3 cut(s) 902, 1548, 1707
AfaI GTAC 3 cut(s) 1225, 1383, 2006
AfiI CCNNNNNNNGG 6 cut(s) 97, 376, 730, 956, 1273, 1433
AflIII ACRYGT 1 cut(s) 1785
AjnI CCWGG 4 cut(s) 172, 652, 977, 1624
AjuI GAANNNNNNNTTGG 4 cut(s) 1521, 1553, 1788, 1820
AleI CACNNNNGTG 1 cut(s) 655
AloI GAACNNNNNNTCC 4 cut(s) 1015, 1047, 1911, 1943
Alw26I GTCTC 6 cut(s) 1006, 1536, 1776, 1944, 2008, 2031
AlwI GGATC 7 cut(s) 64, 258, 338, 372, 1283, 1417, 1653
AlwNI CAGNNNCTG 1 cut(s) 1379
Ama87I CYCGRG 1 cut(s) 639
AoxI GGCC 3 cut(s) 160, 834, 1237
ApeKI GCWGC 9 cut(s) 101, 104, 1078, 1391, 1445, 1486, 1496, 1508, 1844
ApoI RAATTY 2 cut(s) 1244, 1717
Asp700I GAANNNNTTC 4 cut(s) 181, 556, 1157, 1999
AspLEI GCGC 2 cut(s) 411, 532
AspS9I GGNCC 4 cut(s) 161, 698, 834, 1654
AsuC2I CCSGG 3 cut(s) 371, 524, 1456
AsuHPI GGTGA 7 cut(s) 247, 359, 575, 642, 796, 869, 2021
AvaI CYCGRG 1 cut(s) 639
AvaII GGWCC 2 cut(s) 698, 1654
AxyI CCTNAGG 2 cut(s) 74, 150
BaeGI GKGCMC 2 cut(s) 581, 963
BaeI ACNNNNGTAYC 4 cut(s) 579, 612, 904, 937
BanI GGYRCC 3 cut(s) 311, 576, 960
BanII GRGCYC 1 cut(s) 148
BbsI GAAGAC 3 cut(s) 127, 887, 1986
BbvI GCAGC 9 cut(s) 91, 113, 1065, 1403, 1457, 1483, 1495, 1498, 1831
BccI CCATC 5 cut(s) 183, 731, 1229, 1645, 1910
BceAI ACGGC 1 cut(s) 1224
BciT130I CCWGG 4 cut(s) 174, 654, 979, 1626
BciVI GTATCC 2 cut(s) 1159, 1344
BcnI CCSGG 3 cut(s) 371, 524, 1456
BcoDI GTCTC 6 cut(s) 1006, 1536, 1776, 1944, 2008, 2031
BfaI CTAG 5 cut(s) 1107, 1332, 1680, 1902, 1953
BfmI CTRYAG 3 cut(s) 105, 1749, 1881
BfuAI ACCTGC 1 cut(s) 814
BfuI GTATCC 2 cut(s) 1159, 1344
Bme1390I CCNGG 7 cut(s) 174, 371, 524, 654, 979, 1456, 1626
Bme18I GGWCC 2 cut(s) 698, 1654
BmeT110I CYCGRG 1 cut(s) 639
BmgT120I GGNCC 4 cut(s) 161, 698, 834, 1654
BmiI GGNNCC 7 cut(s) 147, 313, 578, 700, 962, 1656, 1773
BmrFI CCNGG 7 cut(s) 174, 371, 524, 654, 979, 1456, 1626
BmrI ACTGGG 1 cut(s) 1261
BmsI GCATC 7 cut(s) 475, 517, 1033, 1168, 1186, 1432, 1845
BmuI ACTGGG 1 cut(s) 1261
BpiI GAAGAC 3 cut(s) 127, 887, 1986
BplI GAGNNNNNCTC 2 cut(s) 2005, 2037
BpuEI CTTGAG 2 cut(s) 378, 1560
BpuMI CCSGG 3 cut(s) 371, 524, 1456
BsaI GGTCTC 1 cut(s) 1944
BsaJI CCNNGG 7 cut(s) 440, 653, 977, 978, 1136, 1361, 1795
BsaXI ACNNNNNCTCC 8 cut(s) 111, 141, 1003, 1033, 1290, 1320, 1911, 1941
Bsc4I CCNNNNNNNGG 6 cut(s) 97, 376, 730, 956, 1273, 1433
Bse1I ACTGG 8 cut(s) 313, 360, 1030, 1075, 1267, 1893, 1931, 2068
Bse21I CCTNAGG 2 cut(s) 74, 150
BseBI CCWGG 4 cut(s) 174, 654, 979, 1626
BseDI CCNNGG 7 cut(s) 440, 653, 977, 978, 1136, 1361, 1795
BseGI GGATG 7 cut(s) 451, 532, 928, 1048, 1860, 1921, 2017
BseLI CCNNNNNNNGG 6 cut(s) 97, 376, 730, 956, 1273, 1433
BseMII CTCAG 4 cut(s) 65, 141, 332, 2036
BseNI ACTGG 8 cut(s) 313, 360, 1030, 1075, 1267, 1893, 1931, 2068
BseRI GAGGAG 2 cut(s) 167, 1537
BseSI GKGCMC 2 cut(s) 581, 963
BseXI GCAGC 9 cut(s) 91, 113, 1065, 1403, 1457, 1483, 1495, 1498, 1831
BseYI CCCAGC 1 cut(s) 91
BshFI GGCC 3 cut(s) 162, 836, 1239
BshNI GGYRCC 3 cut(s) 311, 576, 960
BsiHKCI CYCGRG 1 cut(s) 639
BsiSI CCGG 3 cut(s) 370, 524, 1456
BslFI GGGAC 2 cut(s) 1537, 1640
BslI CCNNNNNNNGG 6 cut(s) 97, 376, 730, 956, 1273, 1433
BsmAI GTCTC 6 cut(s) 1006, 1536, 1776, 1944, 2008, 2031
BsmFI GGGAC 2 cut(s) 1537, 1640
BsmI GAATGC 1 cut(s) 1372
BsnI GGCC 3 cut(s) 162, 836, 1239
Bso31I GGTCTC 1 cut(s) 1944
BsoBI CYCGRG 1 cut(s) 639
Bsp1286I GDGCHC 3 cut(s) 148, 581, 963
Bsp143I GATC 9 cut(s) 69, 263, 343, 364, 463, 1084, 1288, 1409, 1645
Bsp19I CCATGG 3 cut(s) 440, 1136, 1361
BspACI CCGC 5 cut(s) 422, 724, 1252, 1309, 2050
BspANI GGCC 3 cut(s) 162, 836, 1239
BspCNI CTCAG 4 cut(s) 66, 142, 331, 2035
BspHI TCATGA 1 cut(s) 940
BspLI GGNNCC 7 cut(s) 147, 313, 578, 700, 962, 1656, 1773
BspMAI CTGCAG 2 cut(s) 109, 1885
BspMI ACCTGC 1 cut(s) 814
BspPI GGATC 7 cut(s) 64, 258, 338, 372, 1283, 1417, 1653
BspQI GCTCTTC 1 cut(s) 1833
BspT107I GGYRCC 3 cut(s) 311, 576, 960
BspTNI GGTCTC 1 cut(s) 1944
BsrI ACTGG 8 cut(s) 313, 360, 1030, 1075, 1267, 1893, 1931, 2068
BssECI CCNNGG 7 cut(s) 440, 653, 977, 978, 1136, 1361, 1795
BssMI GATC 9 cut(s) 69, 263, 343, 364, 463, 1084, 1288, 1409, 1645
BssT1I CCWWGG 4 cut(s) 440, 1136, 1361, 1795
Bst2UI CCWGG 4 cut(s) 174, 654, 979, 1626
Bst4CI ACNGT 2 cut(s) 275, 938
Bst6I CTCTTC 5 cut(s) 855, 957, 1683, 1774, 1833
BstAPI GCANNNNNTGC 1 cut(s) 635
BstC8I GCNNGC 5 cut(s) 512, 814, 1048, 1076, 1208
BstDEI CTNAG 6 cut(s) 74, 150, 318, 506, 546, 2022
BstDSI CCRYGG 3 cut(s) 440, 1136, 1361
BstEII GGTNACC 1 cut(s) 648
BstENI CCTNNNNNAGG 1 cut(s) 1431
BstF5I GGATG 7 cut(s) 451, 532, 928, 1048, 1860, 1921, 2017
BstHHI GCGC 2 cut(s) 411, 532
BstKTI GATC 9 cut(s) 72, 266, 346, 367, 466, 1087, 1291, 1412, 1648
BstMAI GTCTC 6 cut(s) 1006, 1536, 1776, 1944, 2008, 2031
BstMBI GATC 9 cut(s) 69, 263, 343, 364, 463, 1084, 1288, 1409, 1645
BstMWI GCNNNNNNNGC 7 cut(s) 101, 113, 635, 674, 740, 1315, 1505
BstNI CCWGG 4 cut(s) 174, 654, 979, 1626
BstNSI RCATGY 2 cut(s) 514, 1789
BstPI GGTNACC 1 cut(s) 648
BstSCI CCNGG 7 cut(s) 172, 369, 522, 652, 977, 1454, 1624
BstSFI CTRYAG 3 cut(s) 105, 1749, 1881
BstSLI GKGCMC 2 cut(s) 581, 963
BstV1I GCAGC 9 cut(s) 91, 113, 1065, 1403, 1457, 1483, 1495, 1498, 1831
BstV2I GAAGAC 3 cut(s) 127, 887, 1986
BstX2I RGATCY 2 cut(s) 69, 263
BstXI CCANNNNNNTGG 3 cut(s) 1143, 1347, 1394
BstYI RGATCY 2 cut(s) 69, 263
Bsu36I CCTNAGG 2 cut(s) 74, 150
BsuI GTATCC 2 cut(s) 1159, 1344
BsuRI GGCC 3 cut(s) 162, 836, 1239
BtgI CCRYGG 3 cut(s) 440, 1136, 1361
BtsCI GGATG 7 cut(s) 451, 532, 928, 1048, 1860, 1921, 2017
BtsI GCAGTG 2 cut(s) 54, 114
BtsIMutI CAGTG 6 cut(s) 54, 114, 280, 306, 353, 1563
BveI ACCTGC 1 cut(s) 814
Cac8I GCNNGC 5 cut(s) 512, 814, 1048, 1076, 1208
CaiI CAGNNNCTG 1 cut(s) 1379
CciI TCATGA 1 cut(s) 940
CfoI GCGC 2 cut(s) 411, 532
Cfr13I GGNCC 4 cut(s) 161, 698, 834, 1654
Csp6I GTAC 3 cut(s) 1224, 1382, 2005
CviQI GTAC 3 cut(s) 1224, 1382, 2005
DdeI CTNAG 6 cut(s) 74, 150, 318, 506, 546, 2022
DpnI GATC 9 cut(s) 71, 265, 345, 366, 465, 1086, 1290, 1411, 1647
DpnII GATC 9 cut(s) 69, 263, 343, 364, 463, 1084, 1288, 1409, 1645
EaeI YGGCCR 1 cut(s) 1237
Eam1104I CTCTTC 5 cut(s) 855, 957, 1683, 1774, 1833
EarI CTCTTC 5 cut(s) 855, 957, 1683, 1774, 1833
Eco130I CCWWGG 4 cut(s) 440, 1136, 1361, 1795
Eco24I GRGCYC 1 cut(s) 148
Eco31I GGTCTC 1 cut(s) 1944
Eco47I GGWCC 2 cut(s) 698, 1654
Eco57I CTGAAG 3 cut(s) 902, 1548, 1707
Eco81I CCTNAGG 2 cut(s) 74, 150
Eco88I CYCGRG 1 cut(s) 639
Eco91I GGTNACC 1 cut(s) 648
EcoNI CCTNNNNNAGG 1 cut(s) 1431
EcoO109I RGGNCCY 1 cut(s) 161
EcoO65I GGTNACC 1 cut(s) 648
EcoRII CCWGG 4 cut(s) 172, 652, 977, 1624
EcoT14I CCWWGG 4 cut(s) 440, 1136, 1361, 1795
EcoT38I GRGCYC 1 cut(s) 148
ErhI CCWWGG 4 cut(s) 440, 1136, 1361, 1795
FalI AAGNNNNNCTT 4 cut(s) 565, 597, 1521, 1553
FaqI GGGAC 2 cut(s) 1537, 1640
FauNDI CATATG 2 cut(s) 8, 517
FokI GGATG 7 cut(s) 458, 539, 915, 1055, 1867, 1928, 2004
FriOI GRGCYC 1 cut(s) 148
FspBI CTAG 5 cut(s) 1107, 1332, 1680, 1902, 1953
GlaI GCGC 2 cut(s) 410, 531
GsaI CCCAGC 1 cut(s) 95
HaeIII GGCC 3 cut(s) 162, 836, 1239
HapII CCGG 3 cut(s) 370, 524, 1456
HhaI GCGC 2 cut(s) 411, 532
Hin6I GCGC 2 cut(s) 409, 530
HinP1I GCGC 2 cut(s) 409, 530
HindIII AAGCTT 1 cut(s) 1467
HinfI GANTC 8 cut(s) 221, 608, 1376, 1544, 1553, 1765, 1874, 1886
HpaII CCGG 3 cut(s) 370, 524, 1456
HphI GGTGA 7 cut(s) 247, 359, 575, 642, 796, 869, 2021
Hpy166II GTNNAC 2 cut(s) 474, 871
Hpy8I GTNNAC 2 cut(s) 474, 871
HpyAV CCTTC 9 cut(s) 152, 171, 370, 591, 610, 836, 1526, 1629, 1953
HpyCH4III ACNGT 2 cut(s) 275, 938
HpyF10VI GCNNNNNNNGC 7 cut(s) 101, 113, 635, 674, 740, 1315, 1505
HpyF3I CTNAG 6 cut(s) 74, 150, 318, 506, 546, 2022
HspAI GCGC 2 cut(s) 409, 530
Kzo9I GATC 9 cut(s) 69, 263, 343, 364, 463, 1084, 1288, 1409, 1645
LguI GCTCTTC 1 cut(s) 1833
LmnI GCTCC 2 cut(s) 151, 416
Lsp1109I GCAGC 9 cut(s) 91, 113, 1065, 1403, 1457, 1483, 1495, 1498, 1831
LweI GCATC 7 cut(s) 475, 517, 1033, 1168, 1186, 1432, 1845
MaeI CTAG 5 cut(s) 1107, 1332, 1680, 1902, 1953
MaeIII GTNAC 2 cut(s) 648, 1277
MalI GATC 9 cut(s) 71, 265, 345, 366, 465, 1086, 1290, 1411, 1647
MboI GATC 9 cut(s) 69, 263, 343, 364, 463, 1084, 1288, 1409, 1645
MfeI CAATTG 1 cut(s) 1563
MflI RGATCY 2 cut(s) 69, 263
MhlI GDGCHC 3 cut(s) 148, 581, 963
MluCI AATT 9 cut(s) 552, 1244, 1398, 1403, 1414, 1563, 1717, 1758, 2041
MlyI GAGTC 1 cut(s) 1538
MmeI TCCRAC 1 cut(s) 1153
MroXI GAANNNNTTC 4 cut(s) 181, 556, 1157, 1999
MseI TTAA 6 cut(s) 417, 450, 1002, 1721, 1757, 1790
MslI CAYNNNNRTG 5 cut(s) 339, 655, 1141, 1586, 1821
MspA1I CMGCKG 2 cut(s) 104, 1394
MspI CCGG 3 cut(s) 370, 524, 1456
MspR9I CCNGG 7 cut(s) 174, 371, 524, 654, 979, 1456, 1626
MunI CAATTG 1 cut(s) 1563
Mva1269I GAATGC 1 cut(s) 1372
MvaI CCWGG 4 cut(s) 174, 654, 979, 1626
MwoI GCNNNNNNNGC 7 cut(s) 101, 113, 635, 674, 740, 1315, 1505
NciI CCSGG 3 cut(s) 371, 524, 1456
NcoI CCATGG 3 cut(s) 440, 1136, 1361
NdeI CATATG 2 cut(s) 8, 517
NdeII GATC 9 cut(s) 69, 263, 343, 364, 463, 1084, 1288, 1409, 1645
NlaIV GGNNCC 7 cut(s) 147, 313, 578, 700, 962, 1656, 1773
NmuCI GTSAC 1 cut(s) 648
NspI RCATGY 2 cut(s) 514, 1789
OliI CACNNNNGTG 1 cut(s) 655
PaeI GCATGC 1 cut(s) 514
PaeR7I CTCGAG 1 cut(s) 639
PagI TCATGA 1 cut(s) 940
PasI CCCWGGG 1 cut(s) 978
PciI ACATGT 1 cut(s) 1785
PciSI GCTCTTC 1 cut(s) 1833
PctI GAATGC 1 cut(s) 1372
PdmI GAANNNNTTC 4 cut(s) 181, 556, 1157, 1999
PfeI GAWTC 7 cut(s) 221, 608, 1376, 1553, 1765, 1874, 1886
PfoI TCCNGGA 1 cut(s) 172
PleI GAGTC 1 cut(s) 1538
PpsI GAGTC 1 cut(s) 1538
PscI ACATGT 1 cut(s) 1785
PsiI TTATAA 2 cut(s) 692, 720
Psp6I CCWGG 4 cut(s) 172, 652, 977, 1624
PspEI GGTNACC 1 cut(s) 648
PspFI CCCAGC 1 cut(s) 91
PspGI CCWGG 4 cut(s) 172, 652, 977, 1624
PspN4I GGNNCC 7 cut(s) 147, 313, 578, 700, 962, 1656, 1773
PspPI GGNCC 4 cut(s) 161, 698, 834, 1654
PspXI VCTCGAGB 1 cut(s) 639
PstI CTGCAG 2 cut(s) 109, 1885
PstNI CAGNNNCTG 1 cut(s) 1379
PsuI RGATCY 2 cut(s) 69, 263
PvuII CAGCTG 2 cut(s) 104, 1394
RsaI GTAC 3 cut(s) 1225, 1383, 2006
RsaNI GTAC 3 cut(s) 1224, 1382, 2005
RseI CAYNNNNRTG 5 cut(s) 339, 655, 1141, 1586, 1821
SapI GCTCTTC 1 cut(s) 1833
SaqAI TTAA 6 cut(s) 417, 450, 1002, 1721, 1757, 1790
Sau3AI GATC 9 cut(s) 69, 263, 343, 364, 463, 1084, 1288, 1409, 1645
Sau96I GGNCC 4 cut(s) 161, 698, 834, 1654
SchI GAGTC 1 cut(s) 1538
ScrFI CCNGG 7 cut(s) 174, 371, 524, 654, 979, 1456, 1626
SduI GDGCHC 3 cut(s) 148, 581, 963
SfaNI GCATC 7 cut(s) 475, 517, 1033, 1168, 1186, 1432, 1845
SfcI CTRYAG 3 cut(s) 105, 1749, 1881
Sfr274I CTCGAG 1 cut(s) 639
SinI GGWCC 2 cut(s) 698, 1654
SlaI CTCGAG 1 cut(s) 639
SmiMI CAYNNNNRTG 5 cut(s) 339, 655, 1141, 1586, 1821
SmlI CTYRAG 3 cut(s) 393, 639, 1575
SmoI CTYRAG 3 cut(s) 393, 639, 1575
SphI GCATGC 1 cut(s) 514
Sse9I AATT 9 cut(s) 552, 1244, 1398, 1403, 1414, 1563, 1717, 1758, 2041
SsiI CCGC 5 cut(s) 422, 724, 1252, 1309, 2050
SspI AATATT 1 cut(s) 905
SspMI CTAG 5 cut(s) 1107, 1332, 1680, 1902, 1953
StyD4I CCNGG 7 cut(s) 172, 369, 522, 652, 977, 1454, 1624
StyI CCWWGG 4 cut(s) 440, 1136, 1361, 1795
TaaI ACNGT 2 cut(s) 275, 938
TaqI TCGA 5 cut(s) 185, 640, 1087, 1633, 1877
TaqII GACCGA 1 cut(s) 881
TasI AATT 9 cut(s) 552, 1244, 1398, 1403, 1414, 1563, 1717, 1758, 2041
TatI WGTACW 1 cut(s) 1381
TauI GCSGC 1 cut(s) 2053
TfiI GAWTC 7 cut(s) 221, 608, 1376, 1553, 1765, 1874, 1886
Tru1I TTAA 6 cut(s) 417, 450, 1002, 1721, 1757, 1790
Tru9I TTAA 6 cut(s) 417, 450, 1002, 1721, 1757, 1790
TscAI CASTG 6 cut(s) 54, 114, 280, 313, 360, 1563
TseFI GTSAC 1 cut(s) 648
TseI GCWGC 9 cut(s) 101, 104, 1078, 1391, 1445, 1486, 1496, 1508, 1844
Tsp45I GTSAC 1 cut(s) 648
TspDTI ATGAA 9 cut(s) 127, 621, 794, 833, 855, 957, 1166, 1617, 2054
TspRI CASTG 6 cut(s) 54, 114, 280, 313, 360, 1563
VpaK11BI GGWCC 2 cut(s) 698, 1654
XagI CCTNNNNNAGG 1 cut(s) 1431
XapI RAATTY 2 cut(s) 1244, 1717
XceI RCATGY 2 cut(s) 514, 1789
XcmI CCANNNNNNNNNTGG 1 cut(s) 773
XhoI CTCGAG 1 cut(s) 639
XmnI GAANNNNTTC 4 cut(s) 181, 556, 1157, 1999
XspI CTAG 5 cut(s) 1107, 1332, 1680, 1902, 1953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.