FvH4_5g37290

Blue/Ultraviolet sensing protein C terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0014599
Physical Location & Seq
Reverse (-)
27416923 .. 27421492
4570 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g37290.t4

Sequence Viewer

Length: 1539 bp
ATGCCCTTTGATCCAGAGGCACCACTTCTCCCCCCTAAGAGAATCATATCAGGTGATGCATCAAGGTGTCCTCCTGATACATTGGTTTTTGAAGATGAATCAGAGAAGGGAAGCAATGCGCTACTTGCTCGAGCATGGTCACCTGGGTGGAGCAGTGCTGATAAGGCAGTAACCACATTTATTAATGGTCCATTGATCGAGTATTCCACAAACCGCAGAAAGGCTGATAGTAATACAACTTCACTGCTTTCTCCCCATTTGCATTTTGGGGAGGTAAGTGTCAGAAAAGTATTTCATCTTATACGCATCAAGCAGTTGCTTTGGGCCAATGAAGGTAACAAGGCTGGTGAAGAGAGTGTGAACTTGTTTCTGAAATCTATTGGTCTTAGGGAGTATTCAAGATACATTAGTTTCAATCATCCTTACAGTCATGAAAGACCTCTTCTTGGGCACCTAAAATTCTTCCCCTGGGTTATAAATCAGAACTATTTCAAGGCATGGAGGCAAGGTCGAACTGGCTATCCGTTGGTGGATGCTGGCATGAGAGAATTGTGGGCTACTGGCTGGCTGCATGATCGGATACGAGTTGTTGTTTCTAGTTTCTTCGTAAAGGTTCTGCAGCTCCCGTGGAGGTGGGGAATGAAGTATTTCTGGGACACACTCTTAGATGCTGATCTTGAAAGTGATGCTCTTGGTTGGCAGTATATATCCGGCACTATCCCTGATGGGCGTGAGTTTGACCGCATAGATAATCCACAGTTTGAGGGTTACAAGTGTGATCCACATGGAGAATATGTGCGAAGGTGGCTTCCTGAACTATCCAGGCTACCAACTGACTGGATACACCACCCATGGAATGCACCAGAGTCTGTACTCCAGGCAGCTGGAATTGAACTTGGATCAAATTACCCCCTTCCTATTGTAGGAATAGAAGCAGCAAAATCCAGGTTGCAAGAAGCGTTAACTGAAATGTGGCAGCATGAACGAGCCGCTGCTGAGAATGGAACTGAAGAAGGGCTCGGAGAGTCTTCTGAATCAACCTCCATTGCGTTTCCTGAAGACATACAAATGGAGGATAGTCATGAACAGGTGAGGAATAACCCTCCTCCTCCAACTCGACGCTATGAGGATCAGATGGTCCCTAGTATCACTACTTCCCTCGTGCGAGTTGAAGAGGAAGAAAGTTCTTTGGATCTTCCAAGCAGAGCTGAAGTGCCTACAAATGTTACTGGGGATCAAGAACCAATGAGAGACACAATGAACCAAGAGGGTTTTCAGCCTAATCATAACAACACTCCACCACAACCTAATACTACACTAACCCTGCAGTATGTTGTTGAAGATTCGACGGCGGAATCGTCTAGCAGTACTAGGAGAGAGAGGGATGGAGGTGTAGTTCCAGTTTGGTCTCCTTCAAATTCTAGCTACTCAGAGCAGTTTGTGAGTGATGAAAATGGCATTGCAACAAGTTCTTACTTGCAGAGACATCCTCAGTCTCACCAAATAATGAATTGGAGGCGGCTATCTCAAACTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000302 GO:0000304 GO:0001101 GO:0001558 GO:0002682 GO:0002684 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006464 GO:0006468 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0007623 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0009117 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009639 GO:0009640 GO:0009642 GO:0009644 GO:0009645 GO:0009646 GO:0009719 GO:0009725 GO:0009785 GO:0009791 GO:0009812 GO:0009881 GO:0009882 GO:0009888 GO:0009914 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010073 GO:0010075 GO:0010112 GO:0010114 GO:0010117 GO:0010118 GO:0010218 GO:0010244 GO:0010310 GO:0010343 GO:0010359 GO:0010617 GO:0010817 GO:0012501 GO:0014070 GO:0016301 GO:0016310 GO:0016604 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019222 GO:0019538 GO:0019637 GO:0019725 GO:0022603 GO:0022604 GO:0022898 GO:0023052 GO:0030003 GO:0030522 GO:0030554 GO:0031323 GO:0031347 GO:0031349 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035639 GO:0035690 GO:0036094 GO:0036211 GO:0036473 GO:0038023 GO:0040008 GO:0042221 GO:0042440 GO:0042493 GO:0042592 GO:0042726 GO:0042752 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043269 GO:0043270 GO:0043412 GO:0043900 GO:0043902 GO:0044070 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046283 GO:0046483 GO:0046777 GO:0048037 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050660 GO:0050662 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051049 GO:0051050 GO:0051093 GO:0051128 GO:0051179 GO:0051186 GO:0051193 GO:0051234 GO:0051239 GO:0051241 GO:0051480 GO:0051510 GO:0051606 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055086 GO:0055114 GO:0060089 GO:0060918 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070887 GO:0071000 GO:0071214 GO:0071452 GO:0071478 GO:0071482 GO:0071483 GO:0071496 GO:0071704 GO:0071949 GO:0072387 GO:0072503 GO:0072507 GO:0080134 GO:0097159 GO:0097367 GO:0097468 GO:0098771 GO:0099402 GO:0104004 GO:0140096 GO:1900424 GO:1900426 GO:1900618 GO:1901265 GO:1901332 GO:1901360 GO:1901363 GO:1901371 GO:1901529 GO:1901564 GO:1901672 GO:1901700 GO:1901701 GO:1902347 GO:1902446 GO:1902448 GO:1903793 GO:1903959 GO:1903961 GO:1905421 GO:2000023 GO:2000024 GO:2000026 GO:2000030 GO:2000069 GO:2000280 GO:2000377
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
Cryptochrome_C DNA_photolyase FAD_binding_7

Protein Analysis

513

Amino Acids

58.29

Weight (kDa)

5.21

Isoelectric Point (pI)

54.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_7 PF03441 123 - 321 4.3e-67 FAD binding domain of DNA photolyase
Cryptochrome_C PF12546 349 - 458 9.6e-32 Blue/Ultraviolet sensing protein C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014599)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08920
fragaria_vesca FvH4_5g37290 FvH4_5g37290
malus_domestica MD00G1201600.v1.1 MD15G1369900.v1.1
prunus_persica Prupe.1G517600_v2.0.a1
pyrus_communis pycom08g15710 pycom15g33100
rosa_chinensis RchiOBHm_Chr7g0238851
rosa_laevigata RLG00000000800
rosa_multiflora Rmu_sc0007101.1_g000007
rosa_roxburghii Rroxscaffold_3G00221540
rosa_rugosa Rorug07G0323900
rosa_samantha Rh7AG478000 Rh7CG495900 Rh7DG463200
rosa_wichuraiana Rw7G039930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 476
AccB1I GGYRCC 2 cut(s) 19, 450
AciI CCGC 5 cut(s) 214, 742, 990, 1352, 1519
AclWI GGATC 6 cut(s) 5, 773, 907, 1137, 1200, 1242
AcsI RAATTY 2 cut(s) 458, 1417
AcuI CTGAAG 3 cut(s) 1029, 1077, 1230
AfaI GTAC 2 cut(s) 873, 1369
AfiI CCNNNNNNNGG 3 cut(s) 220, 446, 923
AgsI TTSAA 9 cut(s) 92, 399, 415, 493, 680, 893, 1172, 1340, 1416
AjnI CCWGG 5 cut(s) 142, 467, 821, 876, 944
AjuI GAANNNNNNNTTGG 2 cut(s) 1257, 1289
AleI CACNNNNGTG 1 cut(s) 145
AloI GAACNNNNNNTCC 4 cut(s) 505, 537, 1380, 1412
AluBI AGCT 4 cut(s) 622, 884, 1208, 1425
AluI AGCT 4 cut(s) 622, 884, 1208, 1425
Alw26I GTCTC 4 cut(s) 1245, 1413, 1477, 1500
AlwI GGATC 6 cut(s) 5, 773, 907, 1137, 1200, 1242
AlwNI CAGNNNCTG 1 cut(s) 869
Ama87I CYCGRG 1 cut(s) 129
AoxI GGCC 1 cut(s) 324
ApeKI GCWGC 6 cut(s) 568, 619, 881, 935, 976, 992
ApoI RAATTY 2 cut(s) 458, 1417
AseI ATTAAT 1 cut(s) 183
Asp700I GAANNNNTTC 2 cut(s) 488, 647
AspLEI GCGC 1 cut(s) 121
AspS9I GGNCC 3 cut(s) 188, 324, 1138
AsuHPI GGTGA 5 cut(s) 65, 132, 359, 1102, 1490
AvaI CYCGRG 1 cut(s) 129
AvaII GGWCC 2 cut(s) 188, 1138
BaeGI GKGCMC 1 cut(s) 453
BaeI ACNNNNGTAYC 4 cut(s) 69, 102, 394, 427
BanI GGYRCC 2 cut(s) 19, 450
BanII GRGCYC 1 cut(s) 1020
BarI GAAGNNNNNNTAC 4 cut(s) 223, 255, 1138, 1170
BauI CACGAG 1 cut(s) 1160
BbsI GAAGAC 2 cut(s) 1020, 1065
BbvI GCAGC 6 cut(s) 555, 631, 893, 947, 979, 988
BccI CCATC 3 cut(s) 719, 1129, 1379
BceAI ACGGC 1 cut(s) 1365
BciT130I CCWGG 5 cut(s) 144, 469, 823, 878, 946
BciVI GTATCC 2 cut(s) 573, 834
BcoDI GTCTC 4 cut(s) 1245, 1413, 1477, 1500
BfaI CTAG 5 cut(s) 597, 1143, 1362, 1371, 1422
BfmI CTRYAG 2 cut(s) 617, 1325
BfuI GTATCC 2 cut(s) 573, 834
BisI GCNGC 8 cut(s) 569, 620, 882, 936, 977, 990, 993, 1520
BlsI GCNGC 8 cut(s) 570, 621, 883, 937, 978, 991, 994, 1521
BmcAI AGTACT 1 cut(s) 1369
Bme1390I CCNGG 5 cut(s) 144, 469, 823, 878, 946
Bme18I GGWCC 2 cut(s) 188, 1138
BmeT110I CYCGRG 1 cut(s) 129
BmgT120I GGNCC 3 cut(s) 188, 324, 1138
BmiI GGNNCC 3 cut(s) 21, 452, 1140
BmrFI CCNGG 5 cut(s) 144, 469, 823, 878, 946
BmrI ACTGGG 1 cut(s) 1239
BmsI GCATC 6 cut(s) 46, 68, 315, 523, 658, 676
BmuI ACTGGG 1 cut(s) 1239
BpiI GAAGAC 2 cut(s) 1020, 1065
BplI GAGNNNNNCTC 2 cut(s) 1474, 1506
BpmI CTGGAG 1 cut(s) 860
BsaBI GATNNNNATC 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 1413
BsaJI CCNNGG 5 cut(s) 143, 467, 468, 626, 851
BsaXI ACNNNNNCTCC 8 cut(s) 12, 42, 493, 523, 780, 810, 1380, 1410
Bsc4I CCNNNNNNNGG 3 cut(s) 220, 446, 923
Bse1I ACTGG 6 cut(s) 520, 565, 842, 1234, 1400, 1537
Bse3DI GCAATG 3 cut(s) 121, 1044, 1458
Bse8I GATNNNNATC 1 cut(s) 672
BseBI CCWGG 5 cut(s) 144, 469, 823, 878, 946
BseDI CCNNGG 5 cut(s) 143, 467, 468, 626, 851
BseGI GGATG 4 cut(s) 418, 538, 1390, 1486
BseJI GATNNNNATC 1 cut(s) 672
BseLI CCNNNNNNNGG 3 cut(s) 220, 446, 923
BseMI GCAATG 3 cut(s) 121, 1044, 1458
BseMII CTCAG 3 cut(s) 987, 1443, 1505
BseNI ACTGG 6 cut(s) 520, 565, 842, 1234, 1400, 1537
BseRI GAGGAG 2 cut(s) 1095, 1098
BseSI GKGCMC 1 cut(s) 453
BseXI GCAGC 6 cut(s) 555, 631, 893, 947, 979, 988
BshFI GGCC 1 cut(s) 326
BshNI GGYRCC 2 cut(s) 19, 450
BsiHKCI CYCGRG 1 cut(s) 129
BsiSI CCGG 1 cut(s) 711
BslFI GGGAC 2 cut(s) 668, 1124
BslI CCNNNNNNNGG 3 cut(s) 220, 446, 923
BsmAI GTCTC 4 cut(s) 1245, 1413, 1477, 1500
BsmFI GGGAC 2 cut(s) 668, 1124
BsmI GAATGC 1 cut(s) 862
BsnI GGCC 1 cut(s) 326
Bso31I GGTCTC 1 cut(s) 1413
BsoBI CYCGRG 1 cut(s) 129
Bsp1286I GDGCHC 2 cut(s) 453, 1020
Bsp143I GATC 9 cut(s) 10, 195, 574, 673, 778, 899, 1129, 1192, 1234
Bsp19I CCATGG 1 cut(s) 851
BspACI CCGC 5 cut(s) 214, 742, 990, 1352, 1519
BspANI GGCC 1 cut(s) 326
BspCNI CTCAG 3 cut(s) 988, 1442, 1504
BspHI TCATGA 2 cut(s) 430, 1081
BspLI GGNNCC 3 cut(s) 21, 452, 1140
BspMAI CTGCAG 2 cut(s) 621, 1329
BspPI GGATC 6 cut(s) 5, 773, 907, 1137, 1200, 1242
BspT107I GGYRCC 2 cut(s) 19, 450
BspTNI GGTCTC 1 cut(s) 1413
BsrDI GCAATG 3 cut(s) 121, 1044, 1458
BsrI ACTGG 6 cut(s) 520, 565, 842, 1234, 1400, 1537
BssECI CCNNGG 5 cut(s) 143, 467, 468, 626, 851
BssMI GATC 9 cut(s) 10, 195, 574, 673, 778, 899, 1129, 1192, 1234
BssSI CACGAG 1 cut(s) 1160
BssT1I CCWWGG 1 cut(s) 851
Bst2BI CACGAG 1 cut(s) 1160
Bst2UI CCWGG 5 cut(s) 144, 469, 823, 878, 946
Bst4CI ACNGT 2 cut(s) 428, 759
Bst6I CTCTTC 3 cut(s) 345, 447, 1167
BstC8I GCNNGC 2 cut(s) 538, 566
BstDEI CTNAG 6 cut(s) 36, 386, 664, 996, 1429, 1491
BstDSI CCRYGG 2 cut(s) 626, 851
BstEII GGTNACC 1 cut(s) 138
BstENI CCTNNNNNAGG 1 cut(s) 921
BstF5I GGATG 4 cut(s) 418, 538, 1390, 1486
BstHHI GCGC 1 cut(s) 121
BstKTI GATC 9 cut(s) 13, 198, 577, 676, 781, 902, 1132, 1195, 1237
BstMAI GTCTC 4 cut(s) 1245, 1413, 1477, 1500
BstMBI GATC 9 cut(s) 10, 195, 574, 673, 778, 899, 1129, 1192, 1234
BstMWI GCNNNNNNNGC 3 cut(s) 125, 164, 805
BstNI CCWGG 5 cut(s) 144, 469, 823, 878, 946
BstPI GGTNACC 1 cut(s) 138
BstSCI CCNGG 5 cut(s) 142, 467, 821, 876, 944
BstSFI CTRYAG 2 cut(s) 617, 1325
BstSLI GKGCMC 1 cut(s) 453
BstV1I GCAGC 6 cut(s) 555, 631, 893, 947, 979, 988
BstV2I GAAGAC 2 cut(s) 1020, 1065
BstX2I RGATCY 1 cut(s) 1192
BstXI CCANNNNNNTGG 2 cut(s) 837, 884
BstYI RGATCY 1 cut(s) 1192
BsuI GTATCC 2 cut(s) 573, 834
BsuRI GGCC 1 cut(s) 326
BtgI CCRYGG 2 cut(s) 626, 851
BtsCI GGATG 4 cut(s) 418, 538, 1390, 1486
BtsI GCAGTG 2 cut(s) 160, 242
BtsIMutI CAGTG 2 cut(s) 160, 242
Cac8I GCNNGC 2 cut(s) 538, 566
CaiI CAGNNNCTG 1 cut(s) 869
CciI TCATGA 2 cut(s) 430, 1081
CfoI GCGC 1 cut(s) 121
Cfr13I GGNCC 3 cut(s) 188, 324, 1138
CseI GACGC 1 cut(s) 1128
Csp6I GTAC 2 cut(s) 872, 1368
CviAII CATG 9 cut(s) 135, 431, 498, 541, 572, 785, 852, 980, 1082
CviQI GTAC 2 cut(s) 872, 1368
DdeI CTNAG 6 cut(s) 36, 386, 664, 996, 1429, 1491
DpnI GATC 9 cut(s) 12, 197, 576, 675, 780, 901, 1131, 1194, 1236
DpnII GATC 9 cut(s) 10, 195, 574, 673, 778, 899, 1129, 1192, 1234
Eam1104I CTCTTC 3 cut(s) 345, 447, 1167
EarI CTCTTC 3 cut(s) 345, 447, 1167
EciI GGCGGA 1 cut(s) 1367
Eco130I CCWWGG 1 cut(s) 851
Eco24I GRGCYC 1 cut(s) 1020
Eco31I GGTCTC 1 cut(s) 1413
Eco47I GGWCC 2 cut(s) 188, 1138
Eco57I CTGAAG 3 cut(s) 1029, 1077, 1230
Eco88I CYCGRG 1 cut(s) 129
Eco91I GGTNACC 1 cut(s) 138
EcoNI CCTNNNNNAGG 1 cut(s) 921
EcoO65I GGTNACC 1 cut(s) 138
EcoRII CCWGG 5 cut(s) 142, 467, 821, 876, 944
EcoT14I CCWWGG 1 cut(s) 851
EcoT22I ATGCAT 1 cut(s) 61
EcoT38I GRGCYC 1 cut(s) 1020
ErhI CCWWGG 1 cut(s) 851
FaeI CATG 9 cut(s) 138, 434, 501, 544, 575, 788, 855, 983, 1085
FaqI GGGAC 2 cut(s) 668, 1124
FatI CATG 9 cut(s) 134, 430, 497, 540, 571, 784, 851, 979, 1081
Fnu4HI GCNGC 8 cut(s) 569, 620, 882, 936, 977, 990, 993, 1520
FokI GGATG 4 cut(s) 405, 545, 1397, 1473
FriOI GRGCYC 1 cut(s) 1020
Fsp4HI GCNGC 8 cut(s) 569, 620, 882, 936, 977, 990, 993, 1520
FspBI CTAG 5 cut(s) 597, 1143, 1362, 1371, 1422
GlaI GCGC 1 cut(s) 120
GluI GCNGC 8 cut(s) 569, 620, 882, 936, 977, 990, 993, 1520
GsuI CTGGAG 1 cut(s) 860
HaeIII GGCC 1 cut(s) 326
HapII CCGG 1 cut(s) 711
HgaI GACGC 1 cut(s) 1128
HhaI GCGC 1 cut(s) 121
Hin1II CATG 9 cut(s) 138, 434, 501, 544, 575, 788, 855, 983, 1085
Hin6I GCGC 1 cut(s) 119
HinP1I GCGC 1 cut(s) 119
HincII GTYRAC 1 cut(s) 963
HindII GTYRAC 1 cut(s) 963
HinfI GANTC 7 cut(s) 42, 98, 866, 1025, 1034, 1343, 1355
HpaI GTTAAC 1 cut(s) 963
HpaII CCGG 1 cut(s) 711
HphI GGTGA 5 cut(s) 65, 132, 359, 1102, 1490
Hpy166II GTNNAC 2 cut(s) 361, 963
Hpy188I TCNGA 9 cut(s) 103, 284, 372, 483, 579, 1022, 1033, 1134, 1432
Hpy188III TCNNGA 9 cut(s) 14, 74, 399, 431, 677, 812, 1055, 1082, 1238
Hpy8I GTNNAC 2 cut(s) 361, 963
Hpy99I CGWCG 2 cut(s) 1122, 1351
HpyAV CCTTC 6 cut(s) 100, 326, 795, 923, 1007, 1422
HpyCH4III ACNGT 2 cut(s) 428, 759
HpyCH4V TGCA 9 cut(s) 59, 262, 571, 619, 860, 952, 1327, 1463, 1480
HpyF10VI GCNNNNNNNGC 3 cut(s) 125, 164, 805
HpyF3I CTNAG 6 cut(s) 36, 386, 664, 996, 1429, 1491
Hsp92II CATG 9 cut(s) 138, 434, 501, 544, 575, 788, 855, 983, 1085
HspAI GCGC 1 cut(s) 119
KspAI GTTAAC 1 cut(s) 963
Kzo9I GATC 9 cut(s) 10, 195, 574, 673, 778, 899, 1129, 1192, 1234
LmnI GCTCC 2 cut(s) 150, 627
Lsp1109I GCAGC 6 cut(s) 555, 631, 893, 947, 979, 988
LweI GCATC 6 cut(s) 46, 68, 315, 523, 658, 676
MaeI CTAG 5 cut(s) 597, 1143, 1362, 1371, 1422
MaeIII GTNAC 5 cut(s) 138, 169, 335, 767, 1225
MalI GATC 9 cut(s) 12, 197, 576, 675, 780, 901, 1131, 1194, 1236
MboI GATC 9 cut(s) 10, 195, 574, 673, 778, 899, 1129, 1192, 1234
MflI RGATCY 1 cut(s) 1192
MhlI GDGCHC 2 cut(s) 453, 1020
MluCI AATT 6 cut(s) 458, 548, 888, 904, 1417, 1510
MlyI GAGTC 2 cut(s) 875, 1034
MmeI TCCRAC 1 cut(s) 1136
Mph1103I ATGCAT 1 cut(s) 61
MroXI GAANNNNTTC 2 cut(s) 488, 647
MseI TTAA 2 cut(s) 183, 962
MslI CAYNNNNRTG 3 cut(s) 64, 145, 1067
MspA1I CMGCKG 2 cut(s) 884, 992
MspI CCGG 1 cut(s) 711
MspR9I CCNGG 5 cut(s) 144, 469, 823, 878, 946
Mva1269I GAATGC 1 cut(s) 862
MvaI CCWGG 5 cut(s) 144, 469, 823, 878, 946
MwoI GCNNNNNNNGC 3 cut(s) 125, 164, 805
NcoI CCATGG 1 cut(s) 851
NdeII GATC 9 cut(s) 10, 195, 574, 673, 778, 899, 1129, 1192, 1234
NlaIII CATG 9 cut(s) 138, 434, 501, 544, 575, 788, 855, 983, 1085
NlaIV GGNNCC 3 cut(s) 21, 452, 1140
NmuCI GTSAC 1 cut(s) 138
NsiI ATGCAT 1 cut(s) 61
OliI CACNNNNGTG 1 cut(s) 145
PaeR7I CTCGAG 1 cut(s) 129
PagI TCATGA 2 cut(s) 430, 1081
PasI CCCWGGG 1 cut(s) 468
PcsI WCGNNNNNNNCGW 1 cut(s) 1355
PctI GAATGC 1 cut(s) 862
PdmI GAANNNNTTC 2 cut(s) 488, 647
PfeI GAWTC 5 cut(s) 42, 98, 1034, 1343, 1355
PkrI GCNGC 8 cut(s) 570, 621, 883, 937, 978, 991, 994, 1521
PleI GAGTC 2 cut(s) 874, 1033
PpsI GAGTC 2 cut(s) 874, 1033
PshBI ATTAAT 1 cut(s) 183
PsiI TTATAA 1 cut(s) 476
Psp6I CCWGG 5 cut(s) 142, 467, 821, 876, 944
PspEI GGTNACC 1 cut(s) 138
PspGI CCWGG 5 cut(s) 142, 467, 821, 876, 944
PspN4I GGNNCC 3 cut(s) 21, 452, 1140
PspPI GGNCC 3 cut(s) 188, 324, 1138
PspXI VCTCGAGB 1 cut(s) 129
PstI CTGCAG 2 cut(s) 621, 1329
PstNI CAGNNNCTG 1 cut(s) 869
PsuI RGATCY 1 cut(s) 1192
PvuII CAGCTG 1 cut(s) 884
RsaI GTAC 2 cut(s) 873, 1369
RsaNI GTAC 2 cut(s) 872, 1368
RseI CAYNNNNRTG 3 cut(s) 64, 145, 1067
SaqAI TTAA 2 cut(s) 183, 962
SatI GCNGC 8 cut(s) 569, 620, 882, 936, 977, 990, 993, 1520
Sau3AI GATC 9 cut(s) 10, 195, 574, 673, 778, 899, 1129, 1192, 1234
Sau96I GGNCC 3 cut(s) 188, 324, 1138
ScaI AGTACT 1 cut(s) 1369
SchI GAGTC 2 cut(s) 875, 1034
ScrFI CCNGG 5 cut(s) 144, 469, 823, 878, 946
SduI GDGCHC 2 cut(s) 453, 1020
SfaNI GCATC 6 cut(s) 46, 68, 315, 523, 658, 676
SfcI CTRYAG 2 cut(s) 617, 1325
Sfr274I CTCGAG 1 cut(s) 129
SinI GGWCC 2 cut(s) 188, 1138
SlaI CTCGAG 1 cut(s) 129
SmiMI CAYNNNNRTG 3 cut(s) 64, 145, 1067
SmlI CTYRAG 1 cut(s) 129
SmoI CTYRAG 1 cut(s) 129
Sse9I AATT 6 cut(s) 458, 548, 888, 904, 1417, 1510
SsiI CCGC 5 cut(s) 214, 742, 990, 1352, 1519
SspMI CTAG 5 cut(s) 597, 1143, 1362, 1371, 1422
StyD4I CCNGG 5 cut(s) 142, 467, 821, 876, 944
StyI CCWWGG 1 cut(s) 851
TaaI ACNGT 2 cut(s) 428, 759
TaqI TCGA 5 cut(s) 130, 198, 511, 1117, 1346
TasI AATT 6 cut(s) 458, 548, 888, 904, 1417, 1510
TatI WGTACW 2 cut(s) 871, 1367
TauI GCSGC 2 cut(s) 992, 1522
TfiI GAWTC 5 cut(s) 42, 98, 1034, 1343, 1355
Tru1I TTAA 2 cut(s) 183, 962
Tru9I TTAA 2 cut(s) 183, 962
TscAI CASTG 2 cut(s) 160, 249
TseFI GTSAC 1 cut(s) 138
TseI GCWGC 6 cut(s) 568, 619, 881, 935, 976, 992
Tsp45I GTSAC 1 cut(s) 138
TspGWI ACGGA 1 cut(s) 513
TspRI CASTG 2 cut(s) 160, 249
VpaK11BI GGWCC 2 cut(s) 188, 1138
VspI ATTAAT 1 cut(s) 183
XagI CCTNNNNNAGG 1 cut(s) 921
XapI RAATTY 2 cut(s) 458, 1417
XcmI CCANNNNNNNNNTGG 1 cut(s) 263
XhoI CTCGAG 1 cut(s) 129
XmnI GAANNNNTTC 2 cut(s) 488, 647
XspI CTAG 5 cut(s) 597, 1143, 1362, 1371, 1422
ZrmI AGTACT 1 cut(s) 1369
Zsp2I ATGCAT 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.