Rroxscaffold_3G00221540

Blue/Ultraviolet sensing protein C terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0014599
Physical Location & Seq
Forward (+)
4301048 .. 4304674
3627 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00221540.1

Sequence Viewer

Length: 1944 bp
ATGTCAGGTGGTGGTTGCAGTGTAGTATGGTTCAGGAGAGATCTGAGGGTTGAGGACAATCCAGCTTTGGCGGCTGGAGTCAGAGCAGGAGGAGTTGTTGCTCTCTTTATTTGGGCACCTGAGGAAGAAGGGCCTTTTTACCCAGGAAGGGTCTCAAGGTGGTGGCTCAAACACAGTTTGGCCCATCTTGATTCCTCTTTGAGAAGTTTGGGCACTCCTCTCGTCACCAAGAGATCTACTGATAGTGTTTCTTCTCTTCTTGAGGTTTGTCTTGCAACTGGTGCCACTCAGCTCTTCTTCAACCACTTATATGATCCTATATCACTGGTTAGAGATCACAGGGCCAAGGAGGTTTTGTCTGCCAACGGCATAACTGTGCGAACCTTTAATGCTGATTTGCTCTATGAACCGTGGGATGTTAATGATGTCCACGGTCGCCCATTCACAACCTTTGATGCTTTTTGGGAAAGATGCCTTAGCATGCCATATGATCCAGATGCACCACTTCTCCCCCCAAAGAGAATTGTTTCAGAATGGTCTTCAGGTGATGCATCAAGGTGTCCTTCTGATACATTGATTTTCGAAGATGAATCAGAGAAGGGAAGCAATGCGTTACTTGCTCGAGCATGGTCACCTGGGTGGAGCACTGCTGATAAGGCTGTTACCACATTTATTAATGGTCCATTGATTGAGTATTCCAAAAACCGCAGAAAGGCTGATAGTAATACAACTTCTCTGCTTTCTCCCCATTTGCATTTTGGGGAGGTAAGTGTGAGGAAAGTATTTCATCTTATTCGGATCAAGCAGTTGCTTTGGGCCAATGAAGGTAACAAGGCTGGTGAAGAGAGTGTGAACTTGTTTATGAAATCTATTGGTCTTAGAGAGTATTCAAGATACATTAGTTTCAATCATCCTTACAGTCACGAAAGACCTCTTCTTGGGCACCTAAAATTCTTCCCCTGGGTTATAGATCAGAACTATTTCAAGGCATGGAGGCAAGGTCGAACTGGCTATCCGTTGGTGGATGCTGGCATGAGAGAGTTGTGGGCTACTGGCTGGCTGCATGATCGGATACGAGTTGTAGTTTCTAGTTTCTTTGTAAAGGTTCTGCAGCTTCCATGGAGGTGGGGAATGAAGTATTTCTGGGATACACTCTTAGATGCTGATCTTGAAAGTGATGCTCTTGGTTGGCAGTATATATCTGGCACTATACCTGATGGGCGTGAGTTTGACCGCATAGATAATCCACAGTTTGAGGGTTACAAGTTTGATCCACATGGAGAATATGTGCGACGATGGCTTCCTGAACTTGCCAGGCTACCAACTGACTGGATACACCACCCATGGAATGCGCCAGAATCTGTACTCCAGGCAGCTGGAATTGAACTAGGATCAAATTATCCTCTTCCTATTGTAGGAATAGATGCAGCAAAAACCAGGTTGCAAGAAGCATTAACAGAAATGTGGCAGCATGAAAGAGCCGCTGTTGAGAATGGAACTGAAGAAGGCCTCGGAGAGTCTTCTGAATCAACCCCCGTTGCCTTTCCTCAAGACATACAAATGGAGGATAGTCAAGAACAGGAAGAAAGTTCTGTAGATCTTCCAAGCAGAGCCGAAGTGCCTACAAATGTTACTGGGGATCAAGAATCAAGGAGAGACACATTAAACCAAGAGGGTTTTCAGCCTAATCATAACAACACTCCACCACAACCCAATACTGCCCTAACCCTGCAATTTGTTGTTGAAGATTCCAGTGCAGAATCTTCCAGCAGTACTAGGAGAGAGAGGGATGGAGGTGTAGTTCCAGTTTGGTCTCCTTCAACTTCTAGCTACTCGGAGCAGTTTGTGAGTGATGAGAATGGCATTGCAACAAGTTCTTACTTGCAAAGACATCCTCAGTCTCACCAAATAATGAATTGGAGGCGGCTATCACAAACTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000302 GO:0000304 GO:0001101 GO:0001558 GO:0002682 GO:0002684 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006464 GO:0006468 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0007623 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0009117 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009639 GO:0009640 GO:0009642 GO:0009644 GO:0009645 GO:0009646 GO:0009719 GO:0009725 GO:0009785 GO:0009791 GO:0009812 GO:0009881 GO:0009882 GO:0009888 GO:0009914 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010073 GO:0010075 GO:0010112 GO:0010114 GO:0010117 GO:0010118 GO:0010218 GO:0010244 GO:0010310 GO:0010343 GO:0010359 GO:0010617 GO:0010817 GO:0012501 GO:0014070 GO:0016301 GO:0016310 GO:0016604 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019222 GO:0019538 GO:0019637 GO:0019725 GO:0022603 GO:0022604 GO:0022898 GO:0023052 GO:0030003 GO:0030522 GO:0030554 GO:0031323 GO:0031347 GO:0031349 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035639 GO:0035690 GO:0036094 GO:0036211 GO:0036473 GO:0038023 GO:0040008 GO:0042221 GO:0042440 GO:0042493 GO:0042592 GO:0042726 GO:0042752 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043269 GO:0043270 GO:0043412 GO:0043900 GO:0043902 GO:0044070 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045089 GO:0046283 GO:0046483 GO:0046777 GO:0048037 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050660 GO:0050662 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051049 GO:0051050 GO:0051093 GO:0051128 GO:0051179 GO:0051186 GO:0051193 GO:0051234 GO:0051239 GO:0051241 GO:0051480 GO:0051510 GO:0051606 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055086 GO:0055114 GO:0060089 GO:0060918 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070887 GO:0071000 GO:0071214 GO:0071452 GO:0071478 GO:0071482 GO:0071483 GO:0071496 GO:0071704 GO:0071949 GO:0072387 GO:0072503 GO:0072507 GO:0080134 GO:0097159 GO:0097367 GO:0097468 GO:0098771 GO:0099402 GO:0104004 GO:0140096 GO:1900424 GO:1900426 GO:1900618 GO:1901265 GO:1901332 GO:1901360 GO:1901363 GO:1901371 GO:1901529 GO:1901564 GO:1901672 GO:1901700 GO:1901701 GO:1902347 GO:1902446 GO:1902448 GO:1903793 GO:1903959 GO:1903961 GO:1905421 GO:2000023 GO:2000024 GO:2000026 GO:2000030 GO:2000069 GO:2000280 GO:2000377
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
Cryptochrome_C DNA_photolyase FAD_binding_7

Protein Analysis

647

Amino Acids

73.26

Weight (kDa)

5.37

Isoelectric Point (pI)

54.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 7 - 163 2.6e-40 DNA photolyase
FAD_binding_7 PF03441 287 - 485 1.9e-67 FAD binding domain of DNA photolyase
Cryptochrome_C PF12546 527 - 593 3e-07 Blue/Ultraviolet sensing protein C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014599)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08920
fragaria_vesca FvH4_5g37290 FvH4_5g37290
malus_domestica MD00G1201600.v1.1 MD15G1369900.v1.1
prunus_persica Prupe.1G517600_v2.0.a1
pyrus_communis pycom08g15710 pycom15g33100
rosa_chinensis RchiOBHm_Chr7g0238851
rosa_laevigata RLG00000000800
rosa_multiflora Rmu_sc0007101.1_g000007
rosa_roxburghii Rroxscaffold_3G00221540
rosa_rugosa Rorug07G0323900
rosa_samantha Rh7AG478000 Rh7CG495900 Rh7DG463200
rosa_wichuraiana Rw7G039930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 115, 281, 942
AciI CCGC 5 cut(s) 71, 706, 1234, 1482, 1924
AclWI GGATC 6 cut(s) 308, 485, 806, 1265, 1399, 1647
AcsI RAATTY 1 cut(s) 950
AcuI CTGAAG 2 cut(s) 525, 1521
AfaI GTAC 2 cut(s) 1365, 1774
AfiI CCNNNNNNNGG 4 cut(s) 148, 712, 938, 1415
AgsI TTSAA 8 cut(s) 301, 891, 907, 985, 1172, 1385, 1745, 1821
AjnI CCWGG 6 cut(s) 142, 634, 959, 1313, 1368, 1436
AjuI GAANNNNNNNTTGG 2 cut(s) 1662, 1694
AleI CACNNNNGTG 1 cut(s) 637
AloI GAACNNNNNNTCC 4 cut(s) 997, 1029, 1785, 1817
AluBI AGCT 5 cut(s) 65, 292, 1114, 1376, 1830
AluI AGCT 5 cut(s) 65, 292, 1114, 1376, 1830
Alw21I GWGCWC 1 cut(s) 647
Alw26I GTCTC 4 cut(s) 157, 1650, 1818, 1905
AlwI GGATC 6 cut(s) 308, 485, 806, 1265, 1399, 1647
AlwNI CAGNNNCTG 1 cut(s) 1361
Ama87I CYCGRG 1 cut(s) 621
AoxI GGCC 5 cut(s) 131, 180, 342, 816, 1507
ApeKI GCWGC 5 cut(s) 1060, 1111, 1373, 1427, 1468
ApoI RAATTY 1 cut(s) 950
AseI ATTAAT 1 cut(s) 675
Asp700I GAANNNNTTC 3 cut(s) 526, 980, 1139
AspLEI GCGC 1 cut(s) 1354
AspS9I GGNCC 5 cut(s) 131, 181, 342, 680, 816
AsuHPI GGTGA 5 cut(s) 217, 557, 624, 851, 1895
AsuII TTCGAA 1 cut(s) 582
AvaI CYCGRG 1 cut(s) 621
AvaII GGWCC 1 cut(s) 680
AxyI CCTNAGG 1 cut(s) 120
BaeGI GKGCMC 3 cut(s) 118, 215, 945
BaeI ACNNNNGTAYC 2 cut(s) 886, 919
BanI GGYRCC 3 cut(s) 115, 281, 942
BarI GAAGNNNNNNTAC 2 cut(s) 715, 747
BbsI GAAGAC 2 cut(s) 531, 1512
Bbv12I GWGCWC 1 cut(s) 647
BbvI GCAGC 5 cut(s) 1047, 1123, 1385, 1439, 1480
BccI CCATC 4 cut(s) 192, 1211, 1290, 1784
BceAI ACGGC 1 cut(s) 382
BcgI CGANNNNNNTGC 2 cut(s) 202, 236
BciT130I CCWGG 6 cut(s) 144, 636, 961, 1315, 1370, 1438
BciVI GTATCC 3 cut(s) 1065, 1141, 1326
BcoDI GTCTC 4 cut(s) 157, 1650, 1818, 1905
BfaI CTAG 4 cut(s) 1089, 1388, 1776, 1827
BfmI CTRYAG 2 cut(s) 1109, 1593
BfuI GTATCC 3 cut(s) 1065, 1141, 1326
BglII AGATCT 3 cut(s) 40, 233, 1597
BisI GCNGC 8 cut(s) 72, 1061, 1112, 1374, 1428, 1469, 1482, 1925
BlsI GCNGC 8 cut(s) 73, 1062, 1113, 1375, 1429, 1470, 1483, 1926
BmcAI AGTACT 1 cut(s) 1774
Bme1390I CCNGG 6 cut(s) 144, 636, 961, 1315, 1370, 1438
Bme18I GGWCC 1 cut(s) 680
BmeT110I CYCGRG 1 cut(s) 621
BmgT120I GGNCC 5 cut(s) 131, 181, 342, 680, 816
BmiI GGNNCC 3 cut(s) 117, 283, 944
BmrFI CCNGG 6 cut(s) 144, 636, 961, 1315, 1370, 1438
BmrI ACTGGG 1 cut(s) 1644
BmsI GCATC 9 cut(s) 445, 461, 487, 538, 560, 1015, 1150, 1168, 1414
BmuI ACTGGG 1 cut(s) 1644
BpiI GAAGAC 2 cut(s) 531, 1512
BpmI CTGGAG 2 cut(s) 96, 1352
Bpu10I CCTNAGC 1 cut(s) 476
Bpu14I TTCGAA 1 cut(s) 582
BpuEI CTTGAG 3 cut(s) 139, 281, 1533
BsaBI GATNNNNATC 1 cut(s) 1164
BsaI GGTCTC 2 cut(s) 157, 1818
Bsc4I CCNNNNNNNGG 4 cut(s) 148, 712, 938, 1415
Bse1I ACTGG 9 cut(s) 283, 330, 1012, 1057, 1334, 1639, 1752, 1805, 1942
Bse21I CCTNAGG 1 cut(s) 120
Bse3DI GCAATG 2 cut(s) 613, 1863
Bse8I GATNNNNATC 1 cut(s) 1164
BseBI CCWGG 6 cut(s) 144, 636, 961, 1315, 1370, 1438
BseGI GGATG 5 cut(s) 421, 910, 1030, 1795, 1891
BseJI GATNNNNATC 1 cut(s) 1164
BseLI CCNNNNNNNGG 4 cut(s) 148, 712, 938, 1415
BseMI GCAATG 2 cut(s) 613, 1863
BseMII CTCAG 4 cut(s) 35, 111, 302, 1910
BseNI ACTGG 9 cut(s) 283, 330, 1012, 1057, 1334, 1639, 1752, 1805, 1942
BseRI GAGGAG 2 cut(s) 105, 207
BseSI GKGCMC 3 cut(s) 118, 215, 945
BseXI GCAGC 5 cut(s) 1047, 1123, 1385, 1439, 1480
BsgI GTGCAG 1 cut(s) 1776
Bsh1285I CGRYCG 1 cut(s) 436
BshFI GGCC 5 cut(s) 133, 182, 344, 818, 1509
BshNI GGYRCC 3 cut(s) 115, 281, 942
BsiEI CGRYCG 1 cut(s) 436
BsiHKAI GWGCWC 1 cut(s) 647
BsiHKCI CYCGRG 1 cut(s) 621
BslI CCNNNNNNNGG 4 cut(s) 148, 712, 938, 1415
BsmAI GTCTC 4 cut(s) 157, 1650, 1818, 1905
BsmI GAATGC 1 cut(s) 1354
BsnI GGCC 5 cut(s) 133, 182, 344, 818, 1509
Bso31I GGTCTC 2 cut(s) 157, 1818
BsoBI CYCGRG 1 cut(s) 621
Bsp119I TTCGAA 1 cut(s) 582
Bsp1286I GDGCHC 4 cut(s) 118, 215, 647, 945
Bsp19I CCATGG 2 cut(s) 1118, 1343
BspACI CCGC 5 cut(s) 71, 706, 1234, 1482, 1924
BspANI GGCC 5 cut(s) 133, 182, 344, 818, 1509
BspCNI CTCAG 4 cut(s) 36, 112, 301, 1909
BspLI GGNNCC 3 cut(s) 117, 283, 944
BspMAI CTGCAG 1 cut(s) 1113
BspPI GGATC 6 cut(s) 308, 485, 806, 1265, 1399, 1647
BspQI GCTCTTC 1 cut(s) 299
BspT104I TTCGAA 1 cut(s) 582
BspT107I GGYRCC 3 cut(s) 115, 281, 942
BspTNI GGTCTC 2 cut(s) 157, 1818
BsrDI GCAATG 2 cut(s) 613, 1863
BsrI ACTGG 9 cut(s) 283, 330, 1012, 1057, 1334, 1639, 1752, 1805, 1942
BssT1I CCWWGG 3 cut(s) 345, 1118, 1343
Bst2UI CCWGG 6 cut(s) 144, 636, 961, 1315, 1370, 1438
Bst4CI ACNGT 6 cut(s) 176, 376, 411, 434, 920, 1251
Bst6I CTCTTC 5 cut(s) 261, 299, 837, 939, 1410
BstAPI GCANNNNNTGC 1 cut(s) 281
BstBI TTCGAA 1 cut(s) 582
BstC8I GCNNGC 3 cut(s) 482, 1030, 1058
BstDEI CTNAG 7 cut(s) 44, 120, 288, 476, 878, 1156, 1896
BstDSI CCRYGG 4 cut(s) 410, 430, 1118, 1343
BstEII GGTNACC 1 cut(s) 630
BstENI CCTNNNNNAGG 1 cut(s) 1413
BstF5I GGATG 5 cut(s) 421, 910, 1030, 1795, 1891
BstHHI GCGC 1 cut(s) 1354
BstMAI GTCTC 4 cut(s) 157, 1650, 1818, 1905
BstMCI CGRYCG 1 cut(s) 436
BstMWI GCNNNNNNNGC 5 cut(s) 71, 281, 617, 656, 1297
BstNI CCWGG 6 cut(s) 144, 636, 961, 1315, 1370, 1438
BstNSI RCATGY 1 cut(s) 484
BstPI GGTNACC 1 cut(s) 630
BstSCI CCNGG 6 cut(s) 142, 634, 959, 1313, 1368, 1436
BstSFI CTRYAG 2 cut(s) 1109, 1593
BstSLI GKGCMC 3 cut(s) 118, 215, 945
BstV1I GCAGC 5 cut(s) 1047, 1123, 1385, 1439, 1480
BstV2I GAAGAC 2 cut(s) 531, 1512
BstX2I RGATCY 3 cut(s) 40, 233, 1597
BstXI CCANNNNNNTGG 3 cut(s) 1125, 1329, 1376
BstYI RGATCY 3 cut(s) 40, 233, 1597
Bsu36I CCTNAGG 1 cut(s) 120
BsuI GTATCC 3 cut(s) 1065, 1141, 1326
BsuRI GGCC 5 cut(s) 133, 182, 344, 818, 1509
BtgI CCRYGG 4 cut(s) 410, 430, 1118, 1343
BtsCI GGATG 5 cut(s) 421, 910, 1030, 1795, 1891
BtsI GCAGTG 2 cut(s) 25, 645
BtsIMutI CAGTG 4 cut(s) 25, 323, 645, 1759
Cac8I GCNNGC 3 cut(s) 482, 1030, 1058
CaiI CAGNNNCTG 1 cut(s) 1361
CfoI GCGC 1 cut(s) 1354
Cfr13I GGNCC 5 cut(s) 131, 181, 342, 680, 816
CsiI ACCWGGT 1 cut(s) 1436
Csp6I GTAC 2 cut(s) 1364, 1773
CviAII CATG 9 cut(s) 481, 627, 990, 1033, 1064, 1119, 1277, 1344, 1472
CviQI GTAC 2 cut(s) 1364, 1773
DdeI CTNAG 7 cut(s) 44, 120, 288, 476, 878, 1156, 1896
Eam1104I CTCTTC 5 cut(s) 261, 299, 837, 939, 1410
EarI CTCTTC 5 cut(s) 261, 299, 837, 939, 1410
Eco130I CCWWGG 3 cut(s) 345, 1118, 1343
Eco147I AGGCCT 1 cut(s) 1509
Eco31I GGTCTC 2 cut(s) 157, 1818
Eco47I GGWCC 1 cut(s) 680
Eco57I CTGAAG 2 cut(s) 525, 1521
Eco81I CCTNAGG 1 cut(s) 120
Eco88I CYCGRG 1 cut(s) 621
Eco91I GGTNACC 1 cut(s) 630
EcoNI CCTNNNNNAGG 1 cut(s) 1413
EcoO109I RGGNCCY 1 cut(s) 131
EcoO65I GGTNACC 1 cut(s) 630
EcoRII CCWGG 6 cut(s) 142, 634, 959, 1313, 1368, 1436
EcoT14I CCWWGG 3 cut(s) 345, 1118, 1343
EcoT22I ATGCAT 1 cut(s) 553
ErhI CCWWGG 3 cut(s) 345, 1118, 1343
FaeI CATG 9 cut(s) 484, 630, 993, 1036, 1067, 1122, 1280, 1347, 1475
FalI AAGNNNNNCTT 2 cut(s) 547, 579
FatI CATG 9 cut(s) 480, 626, 989, 1032, 1063, 1118, 1276, 1343, 1471
FauNDI CATATG 1 cut(s) 487
Fnu4HI GCNGC 8 cut(s) 72, 1061, 1112, 1374, 1428, 1469, 1482, 1925
FokI GGATG 5 cut(s) 428, 897, 1037, 1802, 1878
Fsp4HI GCNGC 8 cut(s) 72, 1061, 1112, 1374, 1428, 1469, 1482, 1925
FspBI CTAG 4 cut(s) 1089, 1388, 1776, 1827
GlaI GCGC 1 cut(s) 1353
GluI GCNGC 8 cut(s) 72, 1061, 1112, 1374, 1428, 1469, 1482, 1925
GsuI CTGGAG 2 cut(s) 96, 1352
HaeIII GGCC 5 cut(s) 133, 182, 344, 818, 1509
HhaI GCGC 1 cut(s) 1354
Hin1II CATG 9 cut(s) 484, 630, 993, 1036, 1067, 1122, 1280, 1347, 1475
Hin6I GCGC 1 cut(s) 1352
HinP1I GCGC 1 cut(s) 1352
HinfI GANTC 9 cut(s) 78, 191, 590, 1358, 1517, 1526, 1646, 1748, 1760
HphI GGTGA 5 cut(s) 217, 557, 624, 851, 1895
Hpy166II GTNNAC 2 cut(s) 430, 853
Hpy8I GTNNAC 2 cut(s) 430, 853
Hpy99I CGWCG 1 cut(s) 1296
HpyAV CCTTC 7 cut(s) 122, 141, 573, 592, 818, 1499, 1827
HpyCH4III ACNGT 6 cut(s) 176, 376, 411, 434, 920, 1251
HpyF10VI GCNNNNNNNGC 5 cut(s) 71, 281, 617, 656, 1297
HpyF3I CTNAG 7 cut(s) 44, 120, 288, 476, 878, 1156, 1896
Hsp92II CATG 9 cut(s) 484, 630, 993, 1036, 1067, 1122, 1280, 1347, 1475
HspAI GCGC 1 cut(s) 1352
LguI GCTCTTC 1 cut(s) 299
LmnI GCTCC 2 cut(s) 642, 1837
Lsp1109I GCAGC 5 cut(s) 1047, 1123, 1385, 1439, 1480
LweI GCATC 9 cut(s) 445, 461, 487, 538, 560, 1015, 1150, 1168, 1414
MabI ACCWGGT 1 cut(s) 1436
MaeI CTAG 4 cut(s) 1089, 1388, 1776, 1827
MaeIII GTNAC 8 cut(s) 223, 612, 630, 661, 827, 920, 1259, 1630
MflI RGATCY 3 cut(s) 40, 233, 1597
MhlI GDGCHC 4 cut(s) 118, 215, 647, 945
MluCI AATT 6 cut(s) 522, 950, 1380, 1396, 1733, 1915
MlyI GAGTC 2 cut(s) 87, 1526
Mph1103I ATGCAT 1 cut(s) 553
MroXI GAANNNNTTC 3 cut(s) 526, 980, 1139
MseI TTAA 5 cut(s) 387, 420, 675, 1454, 1664
MslI CAYNNNNRTG 6 cut(s) 309, 374, 556, 637, 1123, 1559
MspA1I CMGCKG 2 cut(s) 1376, 1484
MspR9I CCNGG 6 cut(s) 144, 636, 961, 1315, 1370, 1438
Mva1269I GAATGC 1 cut(s) 1354
MvaI CCWGG 6 cut(s) 144, 636, 961, 1315, 1370, 1438
MwoI GCNNNNNNNGC 5 cut(s) 71, 281, 617, 656, 1297
NcoI CCATGG 2 cut(s) 1118, 1343
NdeI CATATG 1 cut(s) 487
NlaIII CATG 9 cut(s) 484, 630, 993, 1036, 1067, 1122, 1280, 1347, 1475
NlaIV GGNNCC 3 cut(s) 117, 283, 944
NmuCI GTSAC 3 cut(s) 223, 630, 920
NsiI ATGCAT 1 cut(s) 553
NspI RCATGY 1 cut(s) 484
NspV TTCGAA 1 cut(s) 582
OliI CACNNNNGTG 1 cut(s) 637
PaeI GCATGC 1 cut(s) 484
PaeR7I CTCGAG 1 cut(s) 621
PasI CCCWGGG 1 cut(s) 960
PceI AGGCCT 1 cut(s) 1509
PciSI GCTCTTC 1 cut(s) 299
PctI GAATGC 1 cut(s) 1354
PdmI GAANNNNTTC 3 cut(s) 526, 980, 1139
PfeI GAWTC 7 cut(s) 191, 590, 1358, 1526, 1646, 1748, 1760
PkrI GCNGC 8 cut(s) 73, 1062, 1113, 1375, 1429, 1470, 1483, 1926
PleI GAGTC 2 cut(s) 86, 1525
PpsI GAGTC 2 cut(s) 86, 1525
PshBI ATTAAT 1 cut(s) 675
Psp6I CCWGG 6 cut(s) 142, 634, 959, 1313, 1368, 1436
PspEI GGTNACC 1 cut(s) 630
PspGI CCWGG 6 cut(s) 142, 634, 959, 1313, 1368, 1436
PspN4I GGNNCC 3 cut(s) 117, 283, 944
PspPI GGNCC 5 cut(s) 131, 181, 342, 680, 816
PspXI VCTCGAGB 1 cut(s) 621
PstI CTGCAG 1 cut(s) 1113
PstNI CAGNNNCTG 1 cut(s) 1361
PsuI RGATCY 3 cut(s) 40, 233, 1597
PvuII CAGCTG 1 cut(s) 1376
RsaI GTAC 2 cut(s) 1365, 1774
RsaNI GTAC 2 cut(s) 1364, 1773
RseI CAYNNNNRTG 6 cut(s) 309, 374, 556, 637, 1123, 1559
SapI GCTCTTC 1 cut(s) 299
SaqAI TTAA 5 cut(s) 387, 420, 675, 1454, 1664
SatI GCNGC 8 cut(s) 72, 1061, 1112, 1374, 1428, 1469, 1482, 1925
Sau96I GGNCC 5 cut(s) 131, 181, 342, 680, 816
ScaI AGTACT 1 cut(s) 1774
SchI GAGTC 2 cut(s) 87, 1526
ScrFI CCNGG 6 cut(s) 144, 636, 961, 1315, 1370, 1438
SduI GDGCHC 4 cut(s) 118, 215, 647, 945
SexAI ACCWGGT 1 cut(s) 1436
SfaNI GCATC 9 cut(s) 445, 461, 487, 538, 560, 1015, 1150, 1168, 1414
SfcI CTRYAG 2 cut(s) 1109, 1593
Sfr274I CTCGAG 1 cut(s) 621
SfuI TTCGAA 1 cut(s) 582
SinI GGWCC 1 cut(s) 680
SlaI CTCGAG 1 cut(s) 621
SmiMI CAYNNNNRTG 6 cut(s) 309, 374, 556, 637, 1123, 1559
SmlI CTYRAG 4 cut(s) 154, 260, 621, 1548
SmoI CTYRAG 4 cut(s) 154, 260, 621, 1548
SphI GCATGC 1 cut(s) 484
Sse9I AATT 6 cut(s) 522, 950, 1380, 1396, 1733, 1915
SseBI AGGCCT 1 cut(s) 1509
SsiI CCGC 5 cut(s) 71, 706, 1234, 1482, 1924
SspMI CTAG 4 cut(s) 1089, 1388, 1776, 1827
StuI AGGCCT 1 cut(s) 1509
StyD4I CCNGG 6 cut(s) 142, 634, 959, 1313, 1368, 1436
StyI CCWWGG 3 cut(s) 345, 1118, 1343
TaaI ACNGT 6 cut(s) 176, 376, 411, 434, 920, 1251
TaqI TCGA 3 cut(s) 582, 622, 1003
TasI AATT 6 cut(s) 522, 950, 1380, 1396, 1733, 1915
TatI WGTACW 2 cut(s) 1363, 1772
TauI GCSGC 3 cut(s) 74, 1484, 1927
TfiI GAWTC 7 cut(s) 191, 590, 1358, 1526, 1646, 1748, 1760
Tru1I TTAA 5 cut(s) 387, 420, 675, 1454, 1664
Tru9I TTAA 5 cut(s) 387, 420, 675, 1454, 1664
TscAI CASTG 4 cut(s) 25, 330, 652, 1759
TseFI GTSAC 3 cut(s) 223, 630, 920
TseI GCWGC 5 cut(s) 1060, 1111, 1373, 1427, 1468
Tsp45I GTSAC 3 cut(s) 223, 630, 920
TspDTI ATGAA 8 cut(s) 420, 603, 776, 837, 878, 1148, 1488, 1928
TspGWI ACGGA 1 cut(s) 1005
TspRI CASTG 4 cut(s) 25, 330, 652, 1759
VpaK11BI GGWCC 1 cut(s) 680
VspI ATTAAT 1 cut(s) 675
XagI CCTNNNNNAGG 1 cut(s) 1413
XapI RAATTY 1 cut(s) 950
XceI RCATGY 1 cut(s) 484
XcmI CCANNNNNNNNNTGG 1 cut(s) 755
XhoI CTCGAG 1 cut(s) 621
XmnI GAANNNNTTC 3 cut(s) 526, 980, 1139
XspI CTAG 4 cut(s) 1089, 1388, 1776, 1827
ZrmI AGTACT 1 cut(s) 1774
Zsp2I ATGCAT 1 cut(s) 553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.