AT4G14160

Protein transport protein SEC23-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0007064
Physical Location & Seq
Forward (+)
8167351 .. 8173417
6067 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G14160.3

Sequence Viewer

Length: 2322 bp
ATGGCGGAGATGGCGGATAAGGCGAAAGTGGAGGAGATGGATTGGGAAGGTATTGATGGAGTTCGTATGACTTGGAACCTTTGGCCTCGCACTAAGGTTGAAGCAAGCAAGTGTGTGATTCCTCTCGCCGCTTCAATTTCACCGATCCGTCGTCACCCCCTTATCCTTGATCTCCCTTATGCTCCTCTCGATTGCAAGACTTGTAAAGCTCTTCTCAACGCCTTCGCTCGTGTTGATTTCGCCGCTATGAACTGGGTCTGTCCTTTTTGCTATCATAGGAATCATTTCCCTTCTCATTACCATTCGATCTCTGAGATTAATCTCCCTGGTGAGCTTTATCCCCAGTACACTACTGTTGAGTACACGTTGCCTCCTGATCCGTCTCGTGTGCCTCCACCACCTGTGTTTGTGTTTGTTCTCGATACGTGCATGATTGAGGAAGAATTGGGATATGCCAAATCGGCTCTTAAGCAGGCGATCGGGTTGCTTCCGGAGAATGCTTTGGTTGGGTTTGTGTCGTTTGGTACTCAGGCTCATGTGCATGAATTGGGGTTCTCTGAGATGTCTAAAGTTTTTGTCTTTAAAGGCAATAAAGAAGTTACCAAGGATCAAATTTTGGATCAGTTGGGGCTTGGGTCTTCTTCGAGGAGAGCTCCTACTTCTGGGTTTTCTAAAGGAGCGCAAAACGGATTCCAGAGTTCCGGTGTTGACAGATTCCTGCTGCCCGCTTCGGAGTGTGAATACACACTGGACTTGCTTTTGGATGAGCTCCAATCAGACCAGTGGCCTGTTCAGCCAGGTCATCGTCCCCAACGATGCACAGGGGTTGCATTGAGTGTAGCTGCAGGATTGCTTGGAGCTTGCTTACCTGGAACTGGTGCTAGAATTGTAGCTTTGGTTGGAGGTCCATGTACAGAGGGCCCTGGAACGATTATCTCAAAGGATTTGTCAGATCCTGTGCGCTCCCACAAAGATCTAGATAAAGATGCTGCTCCTTATTATAAAAAAGCTGTAAAGTTTTATGATAGTATTGCAAAGCAGCTTGTCGCTCAGGGTCATGTGTTAGACCTTTTCGCTTCTGCACTTGATCAGGTCGGGGTTGCTGAAATGAAAGTAGCCGTTGAAAGTACCGGTGGTCTCGTTGTTCTGTCTGAAAGTTTTGGCCATTCTGTATTTAAAGATTCCTTTAAGAGGATGTTTGAAGATGGCGAGCACTCTCTTGGTCTCTGCTTCAATGGCACGCTTGAGATAAATTGTTCAAAAGACATCAAAATTCAAGGGGTTATCGGGCCTTGCTCATCATTAGAAAAGAAAGGTCCCAATGTTGCTGACACAGTCATTGGAGAGGGGAATACCAGTGCTTGGAAATTGTGTGGCCTCGACAAGAGTACCTGCTTGACTGTATTCTTTGATCTATCTTCAACCGGGTCAACTGCTCCTGGAGCTTTAAATCAGCAGTTGTATTTGCAGTTTATCACAAGATACCAAAACTCTGAAGGTAAAAGTTTGGCCCGGGTTACAACTTTAACCAGACAGTGGGTAGATACTGCTGTGAGCACAGAGGTAAATCTTGTGCAAGGCTTTGACCAAGAAACTGCTGCAGTGGTTATGGCAAGATTAACTTCCTTAAAAATGGAAACAGAGGAGGGATTTGATGCAACTCGGTGGCTAGATCGGACTCTCATTCGTCTGTGTTCAAAATTTGGTGAATATAGAAAGGATGATCCAACCTCGTTTACGCTGAAACCATATCTTACATTGTTCCCTCAATTCATGTTTAACCTGAGGCGGTCACAGTTTGTTCAGGTCTTTAACAATAGTCCTGATGAAACCGCATACTTCCGCATGTTGCTAAACCGGGAAAACATTTCAAATGCAATTGTCATGATCCAACCTTCTCTGACGTCATATTCATTCAATTCAGGACCTCAGGCAGCTTTGCTGGATGTGGCTTCCATTGCAGCTGACAAGATTCTTCTATTAGATGCATATTTTAGTGTTGTTGTCTTCCATGGAATGACTATATCGCAATGGCGAAACATGGGTTATCATCATCAGCCTGAACATGAGGCCTTTGCTCAGTTATTGCAAGCTCCGCAAGAGGATTCCCAGATGTTAGTCCGGGAGCGTTTCCCAGTCCCGAGATTAGTTGTGTGTGATCAACATGGATCACAGGCAAGGTTTTTATTGGCTAAGCTGAATCCATCAGCGACTTACAACAATGCAAACGAGATGTCAGCTGGGTCAGACATAATCTTCACTGACGATGTGAGCCTGCAAGTCTTTATTGAACATCTTCAGAAACTGGCCGTGCAATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

773

Amino Acids

85.38

Weight (kDa)

5.64

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 62 - 100 3.6e-14 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 131 - 400 1.2e-70 Sec23/Sec24 trunk domain
Sec23_BS PF08033 411 - 514 4.6e-23 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 528 - 601 1.5e-16 Sec23/Sec24 helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1002
AatII GACGTC 1 cut(s) 1907
Acc36I ACCTGC 1 cut(s) 1400
AccB7I CCANNNNNTGG 2 cut(s) 1362, 1536
AccIII TCCGGA 1 cut(s) 490
AciI CCGC 9 cut(s) 5, 14, 129, 243, 726, 1789, 1833, 1843, 2096
AclWI GGATC 8 cut(s) 139, 371, 615, 627, 947, 1718, 1882, 2176
AcoI YGGCCR 2 cut(s) 1162, 2307
AcsI RAATTY 3 cut(s) 612, 1272, 1700
AcuI CTGAAG 2 cut(s) 1515, 2282
AcyI GRCGYC 1 cut(s) 1904
AfaI GTAC 6 cut(s) 347, 362, 526, 913, 1129, 1390
AfiI CCNNNNNNNGG 5 cut(s) 662, 875, 1191, 1362, 1536
AflII CTTAAG 1 cut(s) 467
AflIII ACRYGT 1 cut(s) 363
AgeI ACCGGT 1 cut(s) 1130
AjnI CCWGG 5 cut(s) 325, 796, 868, 922, 1438
Alw21I GWGCWC 4 cut(s) 655, 771, 1215, 1559
Alw26I GTCTC 3 cut(s) 387, 1142, 1229
AlwI GGATC 8 cut(s) 139, 371, 615, 627, 947, 1718, 1882, 2176
AlwNI CAGNNNCTG 2 cut(s) 956, 2305
Ama87I CYCGRG 2 cut(s) 1512, 2140
Aor13HI TCCGGA 1 cut(s) 490
AoxI GGCC 9 cut(s) 83, 785, 919, 1162, 1289, 1375, 1509, 2070, 2307
ApaI GGGCCC 1 cut(s) 923
ApeKI GCWGC 7 cut(s) 721, 842, 989, 1039, 1598, 1934, 1961
ApoI RAATTY 3 cut(s) 612, 1272, 1700
ArsI GACNNNNNNTTYG 4 cut(s) 932, 964, 2219, 2251
AseI ATTAAT 1 cut(s) 318
AsiGI ACCGGT 1 cut(s) 1130
Asp700I GAANNNNTTC 2 cut(s) 284, 2295
AspLEI GCGC 2 cut(s) 682, 963
AspS9I GGNCC 7 cut(s) 905, 919, 920, 1289, 1316, 1510, 1925
AsuC2I CCSGG 5 cut(s) 1426, 1513, 1514, 1859, 2123
AsuHPI GGTGA 4 cut(s) 132, 146, 341, 1718
AvaI CYCGRG 2 cut(s) 1512, 2140
AvaII GGWCC 3 cut(s) 905, 1316, 1925
AxyI CCTNAGG 2 cut(s) 1784, 1929
BaeGI GKGCMC 1 cut(s) 923
BaeI ACNNNNGTAYC 4 cut(s) 1372, 1405, 1536, 1569
BalI TGGCCA 1 cut(s) 1164
BanII GRGCYC 3 cut(s) 655, 771, 923
BauI CACGAG 2 cut(s) 228, 384
BbsI GAAGAC 2 cut(s) 630, 1999
Bbv12I GWGCWC 4 cut(s) 655, 771, 1215, 1559
BbvI GCAGC 7 cut(s) 708, 829, 976, 1051, 1585, 1946, 1973
BccI CCATC 5 cut(s) 4, 31, 50, 1199, 2212
BceAI ACGGC 2 cut(s) 1103, 2294
BcgI CGANNNNNNTGC 2 cut(s) 466, 500
BciT130I CCWGG 5 cut(s) 327, 798, 870, 924, 1440
BclI TGATCA 2 cut(s) 1087, 2158
BcnI CCSGG 5 cut(s) 1426, 1513, 1514, 1859, 2123
BcoDI GTCTC 3 cut(s) 387, 1142, 1229
BfaI CTAG 3 cut(s) 882, 977, 1670
BfmI CTRYAG 2 cut(s) 843, 1599
BfrI CTTAAG 1 cut(s) 467
BfuAI ACCTGC 1 cut(s) 1400
BglI GCCNNNNNGGC 1 cut(s) 461
BglII AGATCT 1 cut(s) 973
BisI GCNGC 9 cut(s) 129, 243, 722, 843, 990, 1040, 1599, 1935, 1962
BlpI GCTNAGC 1 cut(s) 2193
BlsI GCNGC 9 cut(s) 130, 244, 723, 844, 991, 1041, 1600, 1936, 1963
Bme18I GGWCC 3 cut(s) 905, 1316, 1925
BmeT110I CYCGRG 2 cut(s) 1512, 2140
BmgT120I GGNCC 7 cut(s) 905, 919, 920, 1289, 1316, 1510, 1925
BmiI GGNNCC 3 cut(s) 77, 921, 1318
BmrI ACTGGG 3 cut(s) 262, 337, 2129
BmsI GCATC 4 cut(s) 806, 976, 1645, 1975
BmuI ACTGGG 3 cut(s) 262, 337, 2129
BpiI GAAGAC 2 cut(s) 630, 1999
BplI GAGNNNNNCTC 2 cut(s) 637, 669
BpmI CTGGAG 1 cut(s) 1461
Bpu10I CCTNAGC 1 cut(s) 1050
Bpu1102I GCTNAGC 1 cut(s) 2193
BpuEI CTTGAG 1 cut(s) 1265
BpuMI CCSGG 5 cut(s) 1426, 1513, 1514, 1859, 2123
BsaAI YACGTR 1 cut(s) 426
BsaHI GRCGYC 1 cut(s) 1904
BsaI GGTCTC 2 cut(s) 1142, 1229
BsaJI CCNNGG 5 cut(s) 325, 603, 922, 1512, 2011
BsaWI WCCGGW 3 cut(s) 490, 701, 1130
BsaXI ACNNNNNCTCC 2 cut(s) 355, 385
Bsc4I CCNNNNNNNGG 5 cut(s) 662, 875, 1191, 1362, 1536
Bse118I RCCGGY 1 cut(s) 1130
Bse1I ACTGG 8 cut(s) 257, 343, 753, 781, 880, 1356, 2135, 2310
Bse21I CCTNAGG 2 cut(s) 1784, 1929
Bse3DI GCAATG 2 cut(s) 1956, 2036
BseAI TCCGGA 1 cut(s) 490
BseBI CCWGG 5 cut(s) 327, 798, 870, 924, 1440
BseDI CCNNGG 5 cut(s) 325, 603, 922, 1512, 2011
BseGI GGATG 4 cut(s) 769, 1200, 1726, 1951
BseLI CCNNNNNNNGG 5 cut(s) 662, 875, 1191, 1362, 1536
BseMI GCAATG 2 cut(s) 1956, 2036
BseMII CTCAG 7 cut(s) 303, 542, 549, 1064, 1775, 1943, 2093
BseNI ACTGG 8 cut(s) 257, 343, 753, 781, 880, 1356, 2135, 2310
BseRI GAGGAG 4 cut(s) 47, 174, 661, 1658
BseSI GKGCMC 1 cut(s) 923
BseXI GCAGC 7 cut(s) 708, 829, 976, 1051, 1585, 1946, 1973
BseYI CCCAGC 1 cut(s) 2240
BsgI GTGCAG 1 cut(s) 1065
Bsh1285I CGRYCG 1 cut(s) 480
BshFI GGCC 9 cut(s) 85, 787, 921, 1164, 1291, 1377, 1511, 2072, 2309
BshTI ACCGGT 1 cut(s) 1130
BsiEI CGRYCG 1 cut(s) 480
BsiHKAI GWGCWC 4 cut(s) 655, 771, 1215, 1559
BsiHKCI CYCGRG 2 cut(s) 1512, 2140
BsiSI CCGG 7 cut(s) 491, 702, 1131, 1425, 1513, 1858, 2122
BslFI GGGAC 3 cut(s) 792, 1302, 2123
BslI CCNNNNNNNGG 5 cut(s) 662, 875, 1191, 1362, 1536
BsmAI GTCTC 3 cut(s) 387, 1142, 1229
BsmBI CGTCTC 1 cut(s) 387
BsmFI GGGAC 3 cut(s) 792, 1302, 2123
BsmI GAATGC 1 cut(s) 502
BsnI GGCC 9 cut(s) 85, 787, 921, 1164, 1291, 1377, 1511, 2072, 2309
Bso31I GGTCTC 2 cut(s) 1142, 1229
BsoBI CYCGRG 2 cut(s) 1512, 2140
Bsp120I GGGCCC 1 cut(s) 919
Bsp1286I GDGCHC 5 cut(s) 655, 771, 923, 1215, 1559
Bsp13I TCCGGA 1 cut(s) 490
Bsp1407I TGTACA 1 cut(s) 911
Bsp1720I GCTNAGC 1 cut(s) 2193
Bsp19I CCATGG 1 cut(s) 2011
BspACI CCGC 9 cut(s) 5, 14, 129, 243, 726, 1789, 1833, 1843, 2096
BspANI GGCC 9 cut(s) 85, 787, 921, 1164, 1291, 1377, 1511, 2072, 2309
BspCNI CTCAG 7 cut(s) 304, 541, 550, 1063, 1776, 1942, 2092
BspEI TCCGGA 1 cut(s) 490
BspHI TCATGA 1 cut(s) 1884
BspLI GGNNCC 3 cut(s) 77, 921, 1318
BspMAI CTGCAG 2 cut(s) 847, 1603
BspMI ACCTGC 1 cut(s) 1400
BspPI GGATC 8 cut(s) 139, 371, 615, 627, 947, 1718, 1882, 2176
BspQI GCTCTTC 1 cut(s) 216
BspTI CTTAAG 1 cut(s) 467
BspTNI GGTCTC 2 cut(s) 1142, 1229
BsrDI GCAATG 2 cut(s) 1956, 2036
BsrFI RCCGGY 1 cut(s) 1130
BsrGI TGTACA 1 cut(s) 911
BsrI ACTGG 8 cut(s) 257, 343, 753, 781, 880, 1356, 2135, 2310
BssAI RCCGGY 1 cut(s) 1130
BssECI CCNNGG 5 cut(s) 325, 603, 922, 1512, 2011
BssNI GRCGYC 1 cut(s) 1904
BssSI CACGAG 2 cut(s) 228, 384
BssT1I CCWWGG 2 cut(s) 603, 2011
Bst2BI CACGAG 2 cut(s) 228, 384
Bst2UI CCWGG 5 cut(s) 327, 798, 870, 924, 1440
Bst4CI ACNGT 5 cut(s) 355, 1336, 1402, 1536, 1797
Bst6I CTCTTC 1 cut(s) 216
BstACI GRCGYC 1 cut(s) 1904
BstAFI CTTAAG 1 cut(s) 467
BstAUI TGTACA 1 cut(s) 911
BstBAI YACGTR 1 cut(s) 426
BstC8I GCNNGC 8 cut(s) 106, 474, 726, 862, 1211, 1241, 2091, 2276
BstDEI CTNAG 9 cut(s) 93, 312, 528, 558, 1050, 1784, 1929, 2079, 2193
BstDSI CCRYGG 1 cut(s) 2011
BstENI CCTNNNNNAGG 1 cut(s) 1189
BstF5I GGATG 4 cut(s) 769, 1200, 1726, 1951
BstHHI GCGC 2 cut(s) 682, 963
BstMAI GTCTC 3 cut(s) 387, 1142, 1229
BstMCI CGRYCG 1 cut(s) 480
BstMWI GCNNNNNNNGC 8 cut(s) 11, 20, 461, 793, 1236, 1442, 1958, 2095
BstNI CCWGG 5 cut(s) 327, 798, 870, 924, 1440
BstNSI RCATGY 1 cut(s) 1849
BstSFI CTRYAG 2 cut(s) 843, 1599
BstSLI GKGCMC 1 cut(s) 923
BstV1I GCAGC 7 cut(s) 708, 829, 976, 1051, 1585, 1946, 1973
BstV2I GAAGAC 2 cut(s) 630, 1999
BstX2I RGATCY 2 cut(s) 952, 973
BstYI RGATCY 2 cut(s) 952, 973
Bsu36I CCTNAGG 2 cut(s) 1784, 1929
BsuRI GGCC 9 cut(s) 85, 787, 921, 1164, 1291, 1377, 1511, 2072, 2309
BtgI CCRYGG 1 cut(s) 2011
BtsCI GGATG 4 cut(s) 769, 1200, 1726, 1951
BtsI GCAGTG 1 cut(s) 1608
BtsIMutI CAGTG 6 cut(s) 746, 788, 1363, 1541, 1608, 2259
BveI ACCTGC 1 cut(s) 1400
Cac8I GCNNGC 8 cut(s) 106, 474, 726, 862, 1211, 1241, 2091, 2276
CaiI CAGNNNCTG 2 cut(s) 956, 2305
CciI TCATGA 1 cut(s) 1884
CfoI GCGC 2 cut(s) 682, 963
Cfr10I RCCGGY 1 cut(s) 1130
Cfr13I GGNCC 7 cut(s) 905, 919, 920, 1289, 1316, 1510, 1925
Cfr9I CCCGGG 1 cut(s) 1512
Csp6I GTAC 6 cut(s) 346, 361, 525, 912, 1128, 1389
CspAI ACCGGT 1 cut(s) 1130
CviQI GTAC 6 cut(s) 346, 361, 525, 912, 1128, 1389
DdeI CTNAG 9 cut(s) 93, 312, 528, 558, 1050, 1784, 1929, 2079, 2193
DraI TTTAAA 3 cut(s) 583, 1177, 1449
EaeI YGGCCR 2 cut(s) 1162, 2307
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
EciI GGCGGA 2 cut(s) 20, 29
Ecl136II GAGCTC 2 cut(s) 653, 769
Eco130I CCWWGG 2 cut(s) 603, 2011
Eco147I AGGCCT 1 cut(s) 2072
Eco24I GRGCYC 3 cut(s) 655, 771, 923
Eco31I GGTCTC 2 cut(s) 1142, 1229
Eco47I GGWCC 3 cut(s) 905, 1316, 1925
Eco53kI GAGCTC 2 cut(s) 653, 769
Eco57I CTGAAG 2 cut(s) 1515, 2282
Eco81I CCTNAGG 2 cut(s) 1784, 1929
Eco88I CYCGRG 2 cut(s) 1512, 2140
EcoICRI GAGCTC 2 cut(s) 653, 769
EcoNI CCTNNNNNAGG 1 cut(s) 1189
EcoO109I RGGNCCY 4 cut(s) 919, 920, 1316, 1925
EcoRII CCWGG 5 cut(s) 325, 796, 868, 922, 1438
EcoT14I CCWWGG 2 cut(s) 603, 2011
EcoT22I ATGCAT 1 cut(s) 1990
EcoT38I GRGCYC 3 cut(s) 655, 771, 923
ErhI CCWWGG 2 cut(s) 603, 2011
Esp3I CGTCTC 1 cut(s) 387
FalI AAGNNNNNCTT 2 cut(s) 1606, 1638
FaqI GGGAC 3 cut(s) 792, 1302, 2123
FauI CCCGC 1 cut(s) 733
FbaI TGATCA 2 cut(s) 1087, 2158
Fnu4HI GCNGC 9 cut(s) 129, 243, 722, 843, 990, 1040, 1599, 1935, 1962
FokI GGATG 4 cut(s) 776, 1207, 1733, 1958
FriOI GRGCYC 3 cut(s) 655, 771, 923
Fsp4HI GCNGC 9 cut(s) 129, 243, 722, 843, 990, 1040, 1599, 1935, 1962
FspBI CTAG 3 cut(s) 882, 977, 1670
GlaI GCGC 2 cut(s) 681, 962
GluI GCNGC 9 cut(s) 129, 243, 722, 843, 990, 1040, 1599, 1935, 1962
GsaI CCCAGC 1 cut(s) 2244
GsuI CTGGAG 1 cut(s) 1461
HaeIII GGCC 9 cut(s) 85, 787, 921, 1164, 1291, 1377, 1511, 2072, 2309
HapII CCGG 7 cut(s) 491, 702, 1131, 1425, 1513, 1858, 2122
HhaI GCGC 2 cut(s) 682, 963
Hin1I GRCGYC 1 cut(s) 1904
Hin6I GCGC 2 cut(s) 680, 961
HinP1I GCGC 2 cut(s) 680, 961
HincII GTYRAC 2 cut(s) 709, 1431
HindII GTYRAC 2 cut(s) 709, 1431
HinfI GANTC 9 cut(s) 118, 280, 690, 714, 1181, 1678, 1972, 2105, 2200
HpaII CCGG 7 cut(s) 491, 702, 1131, 1425, 1513, 1858, 2122
HphI GGTGA 4 cut(s) 132, 146, 341, 1718
Hpy166II GTNNAC 5 cut(s) 348, 363, 709, 1431, 1737
Hpy8I GTNNAC 5 cut(s) 348, 363, 709, 1431, 1737
Hpy99I CGWCG 1 cut(s) 153
HpyAV CCTTC 5 cut(s) 41, 232, 300, 1490, 1905
HpyCH4III ACNGT 5 cut(s) 355, 1336, 1402, 1536, 1797
HpyCH4IV ACGT 3 cut(s) 365, 425, 1904
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 20, 461, 793, 1236, 1442, 1958, 2095
HpyF3I CTNAG 9 cut(s) 93, 312, 528, 558, 1050, 1784, 1929, 2079, 2193
HpySE526I ACGT 3 cut(s) 365, 425, 1904
Hsp92I GRCGYC 1 cut(s) 1904
HspAI GCGC 2 cut(s) 680, 961
Kpn2I TCCGGA 1 cut(s) 490
Ksp22I TGATCA 2 cut(s) 1087, 2158
LguI GCTCTTC 1 cut(s) 216
Lsp1109I GCAGC 7 cut(s) 708, 829, 976, 1051, 1585, 1946, 1973
LweI GCATC 4 cut(s) 806, 976, 1645, 1975
MaeI CTAG 3 cut(s) 882, 977, 1670
MaeII ACGT 3 cut(s) 365, 425, 1904
MaeIII GTNAC 4 cut(s) 152, 598, 1516, 1791
MfeI CAATTG 1 cut(s) 1878
MflI RGATCY 2 cut(s) 952, 973
MhlI GDGCHC 5 cut(s) 655, 771, 923, 1215, 1559
MlsI TGGCCA 1 cut(s) 1164
MluNI TGGCCA 1 cut(s) 1164
MlyI GAGTC 1 cut(s) 1672
MmeI TCCRAC 3 cut(s) 880, 1751, 1915
Mox20I TGGCCA 1 cut(s) 1164
Mph1103I ATGCAT 1 cut(s) 1990
MroI TCCGGA 1 cut(s) 490
MroXI GAANNNNTTC 2 cut(s) 284, 2295
MscI TGGCCA 1 cut(s) 1164
MslI CAYNNNNRTG 1 cut(s) 540
Msp20I TGGCCA 1 cut(s) 1164
MspA1I CMGCKG 2 cut(s) 1964, 2240
MspCI CTTAAG 1 cut(s) 467
MspI CCGG 7 cut(s) 491, 702, 1131, 1425, 1513, 1858, 2122
MunI CAATTG 1 cut(s) 1878
Mva1269I GAATGC 1 cut(s) 502
MvaI CCWGG 5 cut(s) 327, 798, 870, 924, 1440
MwoI GCNNNNNNNGC 8 cut(s) 11, 20, 461, 793, 1236, 1442, 1958, 2095
NciI CCSGG 5 cut(s) 1426, 1513, 1514, 1859, 2123
NcoI CCATGG 1 cut(s) 2011
NlaIV GGNNCC 3 cut(s) 77, 921, 1318
NmuCI GTSAC 2 cut(s) 152, 1791
NsiI ATGCAT 1 cut(s) 1990
NspI RCATGY 1 cut(s) 1849
PagI TCATGA 1 cut(s) 1884
PceI AGGCCT 1 cut(s) 2072
PciSI GCTCTTC 1 cut(s) 216
PcsI WCGNNNNNNNCGW 1 cut(s) 811
PctI GAATGC 1 cut(s) 502
PdmI GAANNNNTTC 2 cut(s) 284, 2295
PfeI GAWTC 8 cut(s) 118, 280, 690, 714, 1181, 1972, 2105, 2200
PflFI GACNNNGTC 1 cut(s) 1334
PflMI CCANNNNNTGG 2 cut(s) 1362, 1536
PfoI TCCNGGA 2 cut(s) 1438, 2121
PinAI ACCGGT 1 cut(s) 1130
PkrI GCNGC 9 cut(s) 130, 244, 723, 844, 991, 1041, 1600, 1936, 1963
Ple19I CGATCG 1 cut(s) 480
PleI GAGTC 1 cut(s) 1672
PpsI GAGTC 1 cut(s) 1672
Ppu21I YACGTR 1 cut(s) 426
PpuMI RGGWCCY 2 cut(s) 1316, 1925
PshBI ATTAAT 1 cut(s) 318
PsiI TTATAA 1 cut(s) 1002
Psp124BI GAGCTC 2 cut(s) 655, 771
Psp5II RGGWCCY 2 cut(s) 1316, 1925
Psp6I CCWGG 5 cut(s) 325, 796, 868, 922, 1438
PspFI CCCAGC 1 cut(s) 2240
PspGI CCWGG 5 cut(s) 325, 796, 868, 922, 1438
PspN4I GGNNCC 3 cut(s) 77, 921, 1318
PspOMI GGGCCC 1 cut(s) 919
PspPI GGNCC 7 cut(s) 905, 919, 920, 1289, 1316, 1510, 1925
PspPPI RGGWCCY 2 cut(s) 1316, 1925
PstI CTGCAG 2 cut(s) 847, 1603
PstNI CAGNNNCTG 2 cut(s) 956, 2305
PsuI RGATCY 2 cut(s) 952, 973
PsyI GACNNNGTC 1 cut(s) 1334
PvuI CGATCG 1 cut(s) 480
PvuII CAGCTG 2 cut(s) 1964, 2240
RsaI GTAC 6 cut(s) 347, 362, 526, 913, 1129, 1390
RsaNI GTAC 6 cut(s) 346, 361, 525, 912, 1128, 1389
RseI CAYNNNNRTG 1 cut(s) 540
SacI GAGCTC 2 cut(s) 655, 771
SapI GCTCTTC 1 cut(s) 216
SatI GCNGC 9 cut(s) 129, 243, 722, 843, 990, 1040, 1599, 1935, 1962
Sau96I GGNCC 7 cut(s) 905, 919, 920, 1289, 1316, 1510, 1925
SchI GAGTC 1 cut(s) 1672
SduI GDGCHC 5 cut(s) 655, 771, 923, 1215, 1559
SfaNI GCATC 4 cut(s) 806, 976, 1645, 1975
SfcI CTRYAG 2 cut(s) 843, 1599
SinI GGWCC 3 cut(s) 905, 1316, 1925
SmaI CCCGGG 1 cut(s) 1514
SmiMI CAYNNNNRTG 1 cut(s) 540
SmlI CTYRAG 2 cut(s) 467, 1244
SmoI CTYRAG 2 cut(s) 467, 1244
SseBI AGGCCT 1 cut(s) 2072
SsiI CCGC 9 cut(s) 5, 14, 129, 243, 726, 1789, 1833, 1843, 2096
SspMI CTAG 3 cut(s) 882, 977, 1670
SstI GAGCTC 2 cut(s) 655, 771
StuI AGGCCT 1 cut(s) 2072
StyI CCWWGG 2 cut(s) 603, 2011
TaaI ACNGT 5 cut(s) 355, 1336, 1402, 1536, 1797
TaiI ACGT 3 cut(s) 368, 428, 1907
TaqI TCGA 5 cut(s) 189, 305, 420, 644, 1380
TatI WGTACW 3 cut(s) 345, 360, 911
TauI GCSGC 2 cut(s) 131, 245
TfiI GAWTC 8 cut(s) 118, 280, 690, 714, 1181, 1972, 2105, 2200
TscAI CASTG 6 cut(s) 753, 788, 1363, 1541, 1608, 2266
TseFI GTSAC 2 cut(s) 152, 1791
TseI GCWGC 7 cut(s) 721, 842, 989, 1039, 1598, 1934, 1961
Tsp45I GTSAC 2 cut(s) 152, 1791
TspDTI ATGAA 6 cut(s) 263, 558, 1124, 1762, 1842, 1902
TspGWI ACGGA 3 cut(s) 137, 369, 702
TspMI CCCGGG 1 cut(s) 1512
TspRI CASTG 6 cut(s) 753, 788, 1363, 1541, 1608, 2266
Tth111I GACNNNGTC 1 cut(s) 1334
Van91I CCANNNNNTGG 2 cut(s) 1362, 1536
Vha464I CTTAAG 1 cut(s) 467
VpaK11BI GGWCC 3 cut(s) 905, 1316, 1925
VspI ATTAAT 1 cut(s) 318
XagI CCTNNNNNAGG 1 cut(s) 1189
XapI RAATTY 3 cut(s) 612, 1272, 1700
XbaI TCTAGA 1 cut(s) 976
XceI RCATGY 1 cut(s) 1849
XmaI CCCGGG 1 cut(s) 1512
XmnI GAANNNNTTC 2 cut(s) 284, 2295
XspI CTAG 3 cut(s) 882, 977, 1670
ZraI GACGTC 1 cut(s) 1905
Zsp2I ATGCAT 1 cut(s) 1990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.