transport protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05520 AT3G23660 AT3G23660 AT4G14160 AT4G14160 AT4G14160 |
| fragaria_vesca | FvH4_4g12850 FvH4_4g12850 FvH4_4g12850 |
| malus_domestica | MD04G1022100.v1.1 MD14G1124000.v1.1 |
| prunus_persica | Prupe.1G172100_v2.0.a1 Prupe.1G172100_v2.0.a1 |
| pyrus_communis | pycom04g01840 pycom13g29230 |
| rosa_chinensis | RchiOBHm_Chr4g0412361 |
| rosa_laevigata | RLG00000008302 |
| rosa_multiflora | Rmu_sc0005141.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00356500 |
| rosa_rugosa | Rorug04G0104600 |
| rosa_samantha | Rh4AG172500 Rh4BG172000 Rh4CG183400 Rh4DG167100 |
| rosa_wichuraiana | Rw4G014420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 931, 972 |
| Acc16I | TGCGCA | 1 cut(s) | 38 |
| Acc36I | ACCTGC | 2 cut(s) | 182, 613 |
| AccB1I | GGYRCC | 2 cut(s) | 373, 524 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 225 |
| AccI | GTMKAC | 1 cut(s) | 207 |
| AccII | CGCG | 3 cut(s) | 155, 202, 204 |
| AciI | CCGC | 5 cut(s) | 61, 102, 121, 163, 180 |
| AclI | AACGTT | 1 cut(s) | 1414 |
| AclWI | GGATC | 7 cut(s) | 32, 85, 112, 236, 966, 1004, 1537 |
| AcsI | RAATTY | 2 cut(s) | 558, 986 |
| AcuI | CTGAAG | 2 cut(s) | 1547, 1568 |
| AcyI | GRCGYC | 1 cut(s) | 374 |
| AfaI | GTAC | 4 cut(s) | 320, 335, 676, 1089 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 225, 376, 955, 1432, 1464 |
| AjiI | CACGTC | 2 cut(s) | 45, 585 |
| AjnI | CCWGG | 3 cut(s) | 727, 1353, 1458 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 414, 446, 820, 852 |
| AluBI | AGCT | 3 cut(s) | 307, 1250, 1379 |
| AluI | AGCT | 3 cut(s) | 307, 1250, 1379 |
| Alw21I | GWGCWC | 1 cut(s) | 309 |
| Alw26I | GTCTC | 5 cut(s) | 281, 507, 872, 917, 980 |
| AlwI | GGATC | 7 cut(s) | 32, 85, 112, 236, 966, 1004, 1537 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1591 |
| AoxI | GGCC | 3 cut(s) | 56, 75, 508 |
| ApeKI | GCWGC | 5 cut(s) | 165, 884, 1163, 1247, 1523 |
| ApoI | RAATTY | 2 cut(s) | 558, 986 |
| AseI | ATTAAT | 1 cut(s) | 1187 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 858 |
| AspA2I | CCTAGG | 1 cut(s) | 1427 |
| AspLEI | GCGC | 6 cut(s) | 39, 157, 204, 252, 376, 1077 |
| AspS9I | GGNCC | 3 cut(s) | 57, 575, 602 |
| AsuC2I | CCSGG | 2 cut(s) | 300, 371 |
| AsuHPI | GGTGA | 2 cut(s) | 1004, 1147 |
| AvaII | GGWCC | 2 cut(s) | 575, 602 |
| AvrII | CCTAGG | 1 cut(s) | 1427 |
| AxyI | CCTNAGG | 1 cut(s) | 18 |
| BanI | GGYRCC | 2 cut(s) | 373, 524 |
| BanII | GRGCYC | 1 cut(s) | 309 |
| BbsI | GAAGAC | 1 cut(s) | 1553 |
| Bbv12I | GWGCWC | 1 cut(s) | 309 |
| BbvCI | CCTCAGC | 1 cut(s) | 1215 |
| BbvI | GCAGC | 5 cut(s) | 152, 871, 1150, 1259, 1510 |
| BccI | CCATC | 4 cut(s) | 819, 945, 1189, 1513 |
| BceAI | ACGGC | 1 cut(s) | 167 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 52, 86 |
| BciT130I | CCWGG | 3 cut(s) | 729, 1355, 1460 |
| BciVI | GTATCC | 1 cut(s) | 1325 |
| BclI | TGATCA | 2 cut(s) | 712, 1401 |
| BcnI | CCSGG | 2 cut(s) | 300, 371 |
| BcoDI | GTCTC | 5 cut(s) | 281, 507, 872, 917, 980 |
| BfaI | CTAG | 2 cut(s) | 819, 1428 |
| BfmI | CTRYAG | 1 cut(s) | 888 |
| BfoI | RGCGCY | 2 cut(s) | 377, 1078 |
| BfuAI | ACCTGC | 2 cut(s) | 182, 613 |
| BfuI | GTATCC | 1 cut(s) | 1325 |
| BglII | AGATCT | 1 cut(s) | 222 |
| BisI | GCNGC | 6 cut(s) | 102, 166, 885, 1164, 1248, 1524 |
| BlnI | CCTAGG | 1 cut(s) | 1427 |
| BlsI | GCNGC | 6 cut(s) | 103, 167, 886, 1165, 1249, 1525 |
| BmcAI | AGTACT | 2 cut(s) | 335, 676 |
| Bme1390I | CCNGG | 5 cut(s) | 300, 371, 729, 1355, 1460 |
| Bme18I | GGWCC | 2 cut(s) | 575, 602 |
| BmgBI | CACGTC | 2 cut(s) | 45, 585 |
| BmgT120I | GGNCC | 3 cut(s) | 57, 575, 602 |
| BmiI | GGNNCC | 4 cut(s) | 59, 375, 526, 1456 |
| BmrFI | CCNGG | 5 cut(s) | 300, 371, 729, 1355, 1460 |
| BmsI | GCATC | 5 cut(s) | 117, 786, 931, 1025, 1588 |
| BpiI | GAAGAC | 1 cut(s) | 1553 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1215 |
| BpuEI | CTTGAG | 2 cut(s) | 551, 768 |
| BpuMI | CCSGG | 2 cut(s) | 300, 371 |
| BsaBI | GATNNNNATC | 1 cut(s) | 227 |
| BsaHI | GRCGYC | 1 cut(s) | 374 |
| BsaI | GGTCTC | 1 cut(s) | 281 |
| BsaJI | CCNNGG | 4 cut(s) | 298, 1297, 1427, 1458 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 225, 376, 955, 1432, 1464 |
| Bse118I | RCCGGY | 1 cut(s) | 376 |
| Bse1I | ACTGG | 1 cut(s) | 331 |
| Bse21I | CCTNAGG | 1 cut(s) | 18 |
| Bse3DI | GCAATG | 1 cut(s) | 1242 |
| Bse8I | GATNNNNATC | 1 cut(s) | 227 |
| BseBI | CCWGG | 3 cut(s) | 729, 1355, 1460 |
| BseDI | CCNNGG | 4 cut(s) | 298, 1297, 1427, 1458 |
| BseGI | GGATG | 3 cut(s) | 135, 1016, 1237 |
| BseJI | GATNNNNATC | 1 cut(s) | 227 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 225, 376, 955, 1432, 1464 |
| BseMI | GCAATG | 1 cut(s) | 1242 |
| BseMII | CTCAG | 3 cut(s) | 9, 329, 1229 |
| BseNI | ACTGG | 1 cut(s) | 331 |
| BseRI | GAGGAG | 2 cut(s) | 944, 1371 |
| BseXI | GCAGC | 5 cut(s) | 152, 871, 1150, 1259, 1510 |
| Bsh1236I | CGCG | 3 cut(s) | 155, 202, 204 |
| BshFI | GGCC | 3 cut(s) | 58, 77, 510 |
| BshNI | GGYRCC | 2 cut(s) | 373, 524 |
| BsiHKAI | GWGCWC | 1 cut(s) | 309 |
| BsiSI | CCGG | 4 cut(s) | 300, 371, 377, 1072 |
| BslFI | GGGAC | 2 cut(s) | 978, 1409 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 225, 376, 955, 1432, 1464 |
| BsmAI | GTCTC | 5 cut(s) | 281, 507, 872, 917, 980 |
| BsmBI | CGTCTC | 2 cut(s) | 917, 980 |
| BsmFI | GGGAC | 2 cut(s) | 978, 1409 |
| BsnI | GGCC | 3 cut(s) | 58, 77, 510 |
| Bso31I | GGTCTC | 1 cut(s) | 281 |
| Bsp1286I | GDGCHC | 1 cut(s) | 309 |
| Bsp1407I | TGTACA | 1 cut(s) | 1087 |
| Bsp19I | CCATGG | 1 cut(s) | 1297 |
| BspACI | CCGC | 5 cut(s) | 61, 102, 121, 163, 180 |
| BspANI | GGCC | 3 cut(s) | 58, 77, 510 |
| BspCNI | CTCAG | 3 cut(s) | 10, 328, 1228 |
| BspFNI | CGCG | 3 cut(s) | 155, 202, 204 |
| BspHI | TCATGA | 2 cut(s) | 1170, 1384 |
| BspLI | GGNNCC | 4 cut(s) | 59, 375, 526, 1456 |
| BspMI | ACCTGC | 2 cut(s) | 182, 613 |
| BspPI | GGATC | 7 cut(s) | 32, 85, 112, 236, 966, 1004, 1537 |
| BspT107I | GGYRCC | 2 cut(s) | 373, 524 |
| BspTNI | GGTCTC | 1 cut(s) | 281 |
| BsrDI | GCAATG | 1 cut(s) | 1242 |
| BsrFI | RCCGGY | 1 cut(s) | 376 |
| BsrGI | TGTACA | 1 cut(s) | 1087 |
| BsrI | ACTGG | 1 cut(s) | 331 |
| BssAI | RCCGGY | 1 cut(s) | 376 |
| BssECI | CCNNGG | 4 cut(s) | 298, 1297, 1427, 1458 |
| BssNI | GRCGYC | 1 cut(s) | 374 |
| BssT1I | CCWWGG | 2 cut(s) | 1297, 1427 |
| Bst2UI | CCWGG | 3 cut(s) | 729, 1355, 1460 |
| Bst4CI | ACNGT | 8 cut(s) | 328, 542, 688, 736, 836, 1106, 1256, 1317 |
| BstACI | GRCGYC | 1 cut(s) | 374 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 174 |
| BstAUI | TGTACA | 1 cut(s) | 1087 |
| BstC8I | GCNNGC | 8 cut(s) | 79, 106, 305, 1079, 1133, 1221, 1377, 1593 |
| BstDEI | CTNAG | 4 cut(s) | 18, 315, 1215, 1605 |
| BstDSI | CCRYGG | 1 cut(s) | 1297 |
| BstF5I | GGATG | 3 cut(s) | 135, 1016, 1237 |
| BstFNI | CGCG | 3 cut(s) | 155, 202, 204 |
| BstH2I | RGCGCY | 2 cut(s) | 377, 1078 |
| BstHHI | GCGC | 6 cut(s) | 39, 157, 204, 252, 376, 1077 |
| BstMAI | GTCTC | 5 cut(s) | 281, 507, 872, 917, 980 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 110, 174, 240, 249, 373, 1244, 1597 |
| BstNI | CCWGG | 3 cut(s) | 729, 1355, 1460 |
| BstNSI | RCATGY | 1 cut(s) | 1135 |
| BstSCI | CCNGG | 5 cut(s) | 298, 369, 727, 1353, 1458 |
| BstSFI | CTRYAG | 1 cut(s) | 888 |
| BstUI | CGCG | 3 cut(s) | 155, 202, 204 |
| BstV1I | GCAGC | 5 cut(s) | 152, 871, 1150, 1259, 1510 |
| BstV2I | GAAGAC | 1 cut(s) | 1553 |
| BstX2I | RGATCY | 2 cut(s) | 222, 228 |
| BstYI | RGATCY | 2 cut(s) | 222, 228 |
| Bsu36I | CCTNAGG | 1 cut(s) | 18 |
| BsuI | GTATCC | 1 cut(s) | 1325 |
| BsuRI | GGCC | 3 cut(s) | 58, 77, 510 |
| BtgI | CCRYGG | 1 cut(s) | 1297 |
| BtgZI | GCGATG | 1 cut(s) | 94 |
| BtrI | CACGTC | 2 cut(s) | 45, 585 |
| BtsCI | GGATG | 3 cut(s) | 135, 1016, 1237 |
| BtsI | GCAGTG | 1 cut(s) | 1602 |
| BtsIMutI | CAGTG | 2 cut(s) | 1322, 1602 |
| BveI | ACCTGC | 2 cut(s) | 182, 613 |
| Cac8I | GCNNGC | 8 cut(s) | 79, 106, 305, 1079, 1133, 1221, 1377, 1593 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1591 |
| CciI | TCATGA | 2 cut(s) | 1170, 1384 |
| CfoI | GCGC | 6 cut(s) | 39, 157, 204, 252, 376, 1077 |
| Cfr10I | RCCGGY | 1 cut(s) | 376 |
| Cfr13I | GGNCC | 3 cut(s) | 57, 575, 602 |
| CseI | GACGC | 1 cut(s) | 193 |
| Csp6I | GTAC | 4 cut(s) | 319, 334, 675, 1088 |
| CviAII | CATG | 9 cut(s) | 40, 1035, 1132, 1171, 1298, 1327, 1385, 1451, 1514 |
| CviQI | GTAC | 4 cut(s) | 319, 334, 675, 1088 |
| DdeI | CTNAG | 4 cut(s) | 18, 315, 1215, 1605 |
| DinI | GGCGCC | 1 cut(s) | 375 |
| DraI | TTTAAA | 1 cut(s) | 1029 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 931, 972 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 931, 972 |
| EciI | GGCGGA | 1 cut(s) | 169 |
| Ecl136II | GAGCTC | 1 cut(s) | 307 |
| Eco130I | CCWWGG | 2 cut(s) | 1297, 1427 |
| Eco24I | GRGCYC | 1 cut(s) | 309 |
| Eco31I | GGTCTC | 1 cut(s) | 281 |
| Eco47I | GGWCC | 2 cut(s) | 575, 602 |
| Eco53kI | GAGCTC | 1 cut(s) | 307 |
| Eco57I | CTGAAG | 2 cut(s) | 1547, 1568 |
| Eco81I | CCTNAGG | 1 cut(s) | 18 |
| EcoICRI | GAGCTC | 1 cut(s) | 307 |
| EcoO109I | RGGNCCY | 1 cut(s) | 602 |
| EcoRII | CCWGG | 3 cut(s) | 727, 1353, 1458 |
| EcoT14I | CCWWGG | 2 cut(s) | 1297, 1427 |
| EcoT38I | GRGCYC | 1 cut(s) | 309 |
| EgeI | GGCGCC | 1 cut(s) | 375 |
| EheI | GGCGCC | 1 cut(s) | 375 |
| ErhI | CCWWGG | 2 cut(s) | 1297, 1427 |
| Esp3I | CGTCTC | 2 cut(s) | 917, 980 |
| FaeI | CATG | 9 cut(s) | 43, 1038, 1135, 1174, 1301, 1330, 1388, 1454, 1517 |
| FaqI | GGGAC | 2 cut(s) | 978, 1409 |
| FatI | CATG | 9 cut(s) | 39, 1034, 1131, 1170, 1297, 1326, 1384, 1450, 1513 |
| FauI | CCCGC | 1 cut(s) | 68 |
| FbaI | TGATCA | 2 cut(s) | 712, 1401 |
| FblI | GTMKAC | 1 cut(s) | 207 |
| Fnu4HI | GCNGC | 6 cut(s) | 102, 166, 885, 1164, 1248, 1524 |
| FokI | GGATG | 3 cut(s) | 122, 1003, 1244 |
| FriOI | GRGCYC | 1 cut(s) | 309 |
| Fsp4HI | GCNGC | 6 cut(s) | 102, 166, 885, 1164, 1248, 1524 |
| FspAI | RTGCGCAY | 1 cut(s) | 38 |
| FspBI | CTAG | 2 cut(s) | 819, 1428 |
| FspI | TGCGCA | 1 cut(s) | 38 |
| GlaI | GCGC | 6 cut(s) | 38, 156, 203, 251, 375, 1076 |
| GluI | GCNGC | 6 cut(s) | 102, 166, 885, 1164, 1248, 1524 |
| HaeII | RGCGCY | 2 cut(s) | 377, 1078 |
| HaeIII | GGCC | 3 cut(s) | 58, 77, 510 |
| HapII | CCGG | 4 cut(s) | 300, 371, 377, 1072 |
| HgaI | GACGC | 1 cut(s) | 193 |
| HhaI | GCGC | 6 cut(s) | 39, 157, 204, 252, 376, 1077 |
| Hin1I | GRCGYC | 1 cut(s) | 374 |
| Hin1II | CATG | 9 cut(s) | 43, 1038, 1135, 1174, 1301, 1330, 1388, 1454, 1517 |
| Hin6I | GCGC | 6 cut(s) | 37, 155, 202, 250, 374, 1075 |
| HinP1I | GCGC | 6 cut(s) | 37, 155, 202, 250, 374, 1075 |
| HincII | GTYRAC | 1 cut(s) | 208 |
| HindII | GTYRAC | 1 cut(s) | 208 |
| HinfI | GANTC | 7 cut(s) | 350, 467, 932, 1141, 1174, 1271, 1339 |
| HpaII | CCGG | 4 cut(s) | 300, 371, 377, 1072 |
| HphI | GGTGA | 2 cut(s) | 1004, 1147 |
| Hpy166II | GTNNAC | 5 cut(s) | 208, 321, 422, 739, 1412 |
| Hpy188I | TCNGA | 5 cut(s) | 286, 850, 1002, 1534, 1587 |
| Hpy188III | TCNNGA | 6 cut(s) | 226, 1109, 1145, 1171, 1385, 1409 |
| Hpy8I | GTNNAC | 5 cut(s) | 208, 321, 422, 739, 1412 |
| Hpy99I | CGWCG | 2 cut(s) | 32, 209 |
| HpyAV | CCTTC | 3 cut(s) | 205, 626, 1500 |
| HpyCH4III | ACNGT | 8 cut(s) | 328, 542, 688, 736, 836, 1106, 1256, 1317 |
| HpyCH4IV | ACGT | 5 cut(s) | 44, 51, 584, 908, 1414 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 110, 174, 240, 249, 373, 1244, 1597 |
| HpyF3I | CTNAG | 4 cut(s) | 18, 315, 1215, 1605 |
| HpySE526I | ACGT | 5 cut(s) | 44, 51, 584, 908, 1414 |
| Hsp92I | GRCGYC | 1 cut(s) | 374 |
| Hsp92II | CATG | 9 cut(s) | 43, 1038, 1135, 1174, 1301, 1330, 1388, 1454, 1517 |
| HspAI | GCGC | 6 cut(s) | 37, 155, 202, 250, 374, 1075 |
| KasI | GGCGCC | 1 cut(s) | 373 |
| Ksp22I | TGATCA | 2 cut(s) | 712, 1401 |
| LmnI | GCTCC | 5 cut(s) | 150, 182, 372, 496, 1384 |
| Lsp1109I | GCAGC | 5 cut(s) | 152, 871, 1150, 1259, 1510 |
| LweI | GCATC | 5 cut(s) | 117, 786, 931, 1025, 1588 |
| MaeI | CTAG | 2 cut(s) | 819, 1428 |
| MaeII | ACGT | 5 cut(s) | 44, 51, 584, 908, 1414 |
| MaeIII | GTNAC | 3 cut(s) | 805, 992, 1322 |
| MboII | GAAGA | 4 cut(s) | 607, 1534, 1553, 1574 |
| MfeI | CAATTG | 2 cut(s) | 405, 746 |
| MflI | RGATCY | 2 cut(s) | 222, 228 |
| MhlI | GDGCHC | 1 cut(s) | 309 |
| Mly113I | GGCGCC | 1 cut(s) | 374 |
| MlyI | GAGTC | 1 cut(s) | 941 |
| MmeI | TCCRAC | 2 cut(s) | 1209, 1248 |
| MroXI | GAANNNNTTC | 1 cut(s) | 858 |
| MseI | TTAA | 4 cut(s) | 519, 1028, 1187, 1203 |
| MspA1I | CMGCKG | 2 cut(s) | 165, 1250 |
| MspI | CCGG | 4 cut(s) | 300, 371, 377, 1072 |
| MspR9I | CCNGG | 5 cut(s) | 300, 371, 729, 1355, 1460 |
| MunI | CAATTG | 2 cut(s) | 405, 746 |
| MvaI | CCWGG | 3 cut(s) | 729, 1355, 1460 |
| MvnI | CGCG | 3 cut(s) | 155, 202, 204 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 110, 174, 240, 249, 373, 1244, 1597 |
| NarI | GGCGCC | 1 cut(s) | 374 |
| NciI | CCSGG | 2 cut(s) | 300, 371 |
| NcoI | CCATGG | 1 cut(s) | 1297 |
| NlaIII | CATG | 9 cut(s) | 43, 1038, 1135, 1174, 1301, 1330, 1388, 1454, 1517 |
| NlaIV | GGNNCC | 4 cut(s) | 59, 375, 526, 1456 |
| NmuCI | GTSAC | 1 cut(s) | 992 |
| NsbI | TGCGCA | 1 cut(s) | 38 |
| NspI | RCATGY | 1 cut(s) | 1135 |
| PaeI | GCATGC | 1 cut(s) | 1135 |
| PagI | TCATGA | 2 cut(s) | 1170, 1384 |
| PdmI | GAANNNNTTC | 1 cut(s) | 858 |
| PfeI | GAWTC | 6 cut(s) | 350, 467, 1141, 1174, 1271, 1339 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 225 |
| PkrI | GCNGC | 6 cut(s) | 103, 167, 886, 1165, 1249, 1525 |
| PleI | GAGTC | 1 cut(s) | 940 |
| PluTI | GGCGCC | 1 cut(s) | 377 |
| PpsI | GAGTC | 1 cut(s) | 940 |
| PpuMI | RGGWCCY | 1 cut(s) | 602 |
| PshBI | ATTAAT | 1 cut(s) | 1187 |
| Psp124BI | GAGCTC | 1 cut(s) | 309 |
| Psp1406I | AACGTT | 1 cut(s) | 1414 |
| Psp5II | RGGWCCY | 1 cut(s) | 602 |
| Psp6I | CCWGG | 3 cut(s) | 727, 1353, 1458 |
| PspGI | CCWGG | 3 cut(s) | 727, 1353, 1458 |
| PspN4I | GGNNCC | 4 cut(s) | 59, 375, 526, 1456 |
| PspPI | GGNCC | 3 cut(s) | 57, 575, 602 |
| PspPPI | RGGWCCY | 1 cut(s) | 602 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 743, 775 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1591 |
| PsuI | RGATCY | 2 cut(s) | 222, 228 |
| PvuII | CAGCTG | 1 cut(s) | 1250 |
| RsaI | GTAC | 4 cut(s) | 320, 335, 676, 1089 |
| RsaNI | GTAC | 4 cut(s) | 319, 334, 675, 1088 |
| SacI | GAGCTC | 1 cut(s) | 309 |
| SalI | GTCGAC | 1 cut(s) | 206 |
| SaqAI | TTAA | 4 cut(s) | 519, 1028, 1187, 1203 |
| SatI | GCNGC | 6 cut(s) | 102, 166, 885, 1164, 1248, 1524 |
| Sau96I | GGNCC | 3 cut(s) | 57, 575, 602 |
| ScaI | AGTACT | 2 cut(s) | 335, 676 |
| SchI | GAGTC | 1 cut(s) | 941 |
| ScrFI | CCNGG | 5 cut(s) | 300, 371, 729, 1355, 1460 |
| SduI | GDGCHC | 1 cut(s) | 309 |
| SfaNI | GCATC | 5 cut(s) | 117, 786, 931, 1025, 1588 |
| SfcI | CTRYAG | 1 cut(s) | 888 |
| SfoI | GGCGCC | 1 cut(s) | 375 |
| SinI | GGWCC | 2 cut(s) | 575, 602 |
| SmlI | CTYRAG | 2 cut(s) | 530, 783 |
| SmoI | CTYRAG | 2 cut(s) | 530, 783 |
| SphI | GCATGC | 1 cut(s) | 1135 |
| SsiI | CCGC | 5 cut(s) | 61, 102, 121, 163, 180 |
| SspDI | GGCGCC | 1 cut(s) | 373 |
| SspMI | CTAG | 2 cut(s) | 819, 1428 |
| SstI | GAGCTC | 1 cut(s) | 309 |
| StyD4I | CCNGG | 5 cut(s) | 298, 369, 727, 1353, 1458 |
| StyI | CCWWGG | 2 cut(s) | 1297, 1427 |
| TaaI | ACNGT | 8 cut(s) | 328, 542, 688, 736, 836, 1106, 1256, 1317 |
| TaiI | ACGT | 5 cut(s) | 47, 54, 587, 911, 1417 |
| TaqI | TCGA | 5 cut(s) | 27, 72, 207, 802, 1575 |
| TatI | WGTACW | 4 cut(s) | 318, 333, 674, 1087 |
| TauI | GCSGC | 1 cut(s) | 104 |
| TfiI | GAWTC | 6 cut(s) | 350, 467, 1141, 1174, 1271, 1339 |
| Tru1I | TTAA | 4 cut(s) | 519, 1028, 1187, 1203 |
| Tru9I | TTAA | 4 cut(s) | 519, 1028, 1187, 1203 |
| TscAI | CASTG | 2 cut(s) | 1322, 1602 |
| TseFI | GTSAC | 1 cut(s) | 992 |
| TseI | GCWGC | 5 cut(s) | 165, 884, 1163, 1247, 1523 |
| Tsp45I | GTSAC | 1 cut(s) | 992 |
| TspDTI | ATGAA | 4 cut(s) | 410, 1032, 1128, 1263 |
| TspGWI | ACGGA | 2 cut(s) | 45, 941 |
| TspRI | CASTG | 2 cut(s) | 1322, 1602 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 225 |
| VpaK11BI | GGWCC | 2 cut(s) | 575, 602 |
| VspI | ATTAAT | 1 cut(s) | 1187 |
| XapI | RAATTY | 2 cut(s) | 558, 986 |
| XceI | RCATGY | 1 cut(s) | 1135 |
| XmaJI | CCTAGG | 1 cut(s) | 1427 |
| XmiI | GTMKAC | 1 cut(s) | 207 |
| XmnI | GAANNNNTTC | 1 cut(s) | 858 |
| XspI | CTAG | 2 cut(s) | 819, 1428 |
| ZrmI | AGTACT | 2 cut(s) | 335, 676 |