transport protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05520 AT3G23660 AT3G23660 AT4G14160 AT4G14160 AT4G14160 |
| fragaria_vesca | FvH4_4g12850 FvH4_4g12850 FvH4_4g12850 |
| malus_domestica | MD04G1022100.v1.1 MD14G1124000.v1.1 |
| prunus_persica | Prupe.1G172100_v2.0.a1 Prupe.1G172100_v2.0.a1 |
| pyrus_communis | pycom04g01840 pycom13g29230 |
| rosa_chinensis | RchiOBHm_Chr4g0412361 |
| rosa_laevigata | RLG00000008302 |
| rosa_multiflora | Rmu_sc0005141.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00356500 |
| rosa_rugosa | Rorug04G0104600 |
| rosa_samantha | Rh4AG172500 Rh4BG172000 Rh4CG183400 Rh4DG167100 |
| rosa_wichuraiana | Rw4G014420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 97 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1228, 1269 |
| Acc36I | ACCTGC | 2 cut(s) | 97, 910 |
| AccB1I | GGYRCC | 1 cut(s) | 821 |
| AciI | CCGC | 4 cut(s) | 309, 377, 413, 572 |
| AclI | AACGTT | 1 cut(s) | 1711 |
| AclWI | GGATC | 4 cut(s) | 186, 1263, 1301, 1834 |
| AcoI | YGGCCR | 1 cut(s) | 214 |
| AcsI | RAATTY | 2 cut(s) | 855, 1283 |
| AcuI | CTGAAG | 4 cut(s) | 59, 519, 1844, 1865 |
| AfaI | GTAC | 5 cut(s) | 245, 403, 496, 973, 1386 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 219, 236, 256, 284, 1252, 1729, 1761 |
| AjnI | CCWGG | 7 cut(s) | 201, 379, 505, 633, 1024, 1650, 1755 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 711, 743, 1117, 1149 |
| AluBI | AGCT | 4 cut(s) | 625, 1143, 1547, 1676 |
| AluI | AGCT | 4 cut(s) | 625, 1143, 1547, 1676 |
| Alw26I | GTCTC | 4 cut(s) | 804, 1169, 1214, 1277 |
| AlwI | GGATC | 4 cut(s) | 186, 1263, 1301, 1834 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 187, 1888 |
| AoxI | GGCC | 7 cut(s) | 199, 214, 221, 368, 503, 573, 805 |
| ApeKI | GCWGC | 8 cut(s) | 55, 58, 425, 622, 1181, 1460, 1544, 1820 |
| ApoI | RAATTY | 2 cut(s) | 855, 1283 |
| AseI | ATTAAT | 1 cut(s) | 1484 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1155 |
| AspA2I | CCTAGG | 1 cut(s) | 1724 |
| AspLEI | GCGC | 2 cut(s) | 37, 1374 |
| AspS9I | GGNCC | 8 cut(s) | 199, 222, 227, 488, 503, 574, 872, 899 |
| AsuC2I | CCSGG | 1 cut(s) | 225 |
| AsuHPI | GGTGA | 3 cut(s) | 283, 1301, 1444 |
| AvaII | GGWCC | 4 cut(s) | 227, 488, 872, 899 |
| AvrII | CCTAGG | 1 cut(s) | 1724 |
| BaeGI | GKGCMC | 2 cut(s) | 161, 466 |
| BanI | GGYRCC | 1 cut(s) | 821 |
| BbsI | GAAGAC | 1 cut(s) | 1850 |
| BbvCI | CCTCAGC | 1 cut(s) | 1512 |
| BbvI | GCAGC | 8 cut(s) | 42, 45, 437, 634, 1168, 1447, 1556, 1807 |
| BccI | CCATC | 5 cut(s) | 10, 1116, 1242, 1486, 1810 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 37, 71 |
| BciT130I | CCWGG | 7 cut(s) | 203, 381, 507, 635, 1026, 1652, 1757 |
| BciVI | GTATCC | 1 cut(s) | 1622 |
| BclI | TGATCA | 3 cut(s) | 670, 1009, 1698 |
| BcnI | CCSGG | 1 cut(s) | 225 |
| BcoDI | GTCTC | 4 cut(s) | 804, 1169, 1214, 1277 |
| BfaI | CTAG | 4 cut(s) | 396, 626, 1116, 1725 |
| BfmI | CTRYAG | 1 cut(s) | 1185 |
| BfoI | RGCGCY | 2 cut(s) | 38, 1375 |
| BfuAI | ACCTGC | 2 cut(s) | 97, 910 |
| BfuI | GTATCC | 1 cut(s) | 1622 |
| BglII | AGATCT | 2 cut(s) | 526, 556 |
| BlnI | CCTAGG | 1 cut(s) | 1724 |
| BmcAI | AGTACT | 1 cut(s) | 973 |
| Bme1390I | CCNGG | 8 cut(s) | 203, 225, 381, 507, 635, 1026, 1652, 1757 |
| Bme18I | GGWCC | 4 cut(s) | 227, 488, 872, 899 |
| BmgT120I | GGNCC | 8 cut(s) | 199, 222, 227, 488, 503, 574, 872, 899 |
| BmiI | GGNNCC | 4 cut(s) | 125, 576, 823, 1753 |
| BmrFI | CCNGG | 8 cut(s) | 203, 225, 381, 507, 635, 1026, 1652, 1757 |
| BmrI | ACTGGG | 1 cut(s) | 468 |
| BmsI | GCATC | 7 cut(s) | 325, 559, 668, 1083, 1228, 1322, 1885 |
| BmuI | ACTGGG | 1 cut(s) | 468 |
| BpiI | GAAGAC | 1 cut(s) | 1850 |
| BpmI | CTGGAG | 1 cut(s) | 209 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1512 |
| BpuEI | CTTGAG | 2 cut(s) | 848, 1065 |
| BpuMI | CCSGG | 1 cut(s) | 225 |
| BsaJI | CCNNGG | 6 cut(s) | 174, 477, 634, 1594, 1724, 1755 |
| BsaWI | WCCGGW | 1 cut(s) | 404 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 5, 35, 211, 241, 399, 429, 501, 531 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 219, 236, 256, 284, 1252, 1729, 1761 |
| Bse118I | RCCGGY | 1 cut(s) | 428 |
| Bse1I | ACTGG | 3 cut(s) | 463, 539, 1065 |
| Bse3DI | GCAATG | 1 cut(s) | 1539 |
| BseBI | CCWGG | 7 cut(s) | 203, 381, 507, 635, 1026, 1652, 1757 |
| BseDI | CCNNGG | 6 cut(s) | 174, 477, 634, 1594, 1724, 1755 |
| BseGI | GGATG | 4 cut(s) | 352, 574, 1313, 1534 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 219, 236, 256, 284, 1252, 1729, 1761 |
| BseMI | GCAATG | 1 cut(s) | 1539 |
| BseMII | CTCAG | 3 cut(s) | 113, 1158, 1526 |
| BseNI | ACTGG | 3 cut(s) | 463, 539, 1065 |
| BseRI | GAGGAG | 5 cut(s) | 23, 26, 252, 1241, 1668 |
| BseSI | GKGCMC | 2 cut(s) | 161, 466 |
| BseX3I | CGGCCG | 1 cut(s) | 214 |
| BseXI | GCAGC | 8 cut(s) | 42, 45, 437, 634, 1168, 1447, 1556, 1807 |
| BsgI | GTGCAG | 2 cut(s) | 125, 648 |
| Bsh1285I | CGRYCG | 2 cut(s) | 217, 392 |
| BshFI | GGCC | 7 cut(s) | 201, 216, 223, 370, 505, 575, 807 |
| BshNI | GGYRCC | 1 cut(s) | 821 |
| BsiEI | CGRYCG | 2 cut(s) | 217, 392 |
| BsiSI | CCGG | 7 cut(s) | 62, 213, 217, 225, 405, 429, 1369 |
| BslFI | GGGAC | 3 cut(s) | 109, 1275, 1706 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 219, 236, 256, 284, 1252, 1729, 1761 |
| BsmAI | GTCTC | 4 cut(s) | 804, 1169, 1214, 1277 |
| BsmBI | CGTCTC | 1 cut(s) | 1277 |
| BsmFI | GGGAC | 3 cut(s) | 109, 1275, 1706 |
| BsmI | GAATGC | 2 cut(s) | 73, 323 |
| BsnI | GGCC | 7 cut(s) | 201, 216, 223, 370, 505, 575, 807 |
| Bsp1286I | GDGCHC | 2 cut(s) | 161, 466 |
| Bsp1407I | TGTACA | 1 cut(s) | 1384 |
| Bsp19I | CCATGG | 1 cut(s) | 1594 |
| BspACI | CCGC | 4 cut(s) | 309, 377, 413, 572 |
| BspANI | GGCC | 7 cut(s) | 201, 216, 223, 370, 505, 575, 807 |
| BspCNI | CTCAG | 3 cut(s) | 112, 1157, 1525 |
| BspHI | TCATGA | 2 cut(s) | 1467, 1681 |
| BspLI | GGNNCC | 4 cut(s) | 125, 576, 823, 1753 |
| BspMI | ACCTGC | 2 cut(s) | 97, 910 |
| BspPI | GGATC | 4 cut(s) | 186, 1263, 1301, 1834 |
| BspT107I | GGYRCC | 1 cut(s) | 821 |
| BsrDI | GCAATG | 1 cut(s) | 1539 |
| BsrFI | RCCGGY | 1 cut(s) | 428 |
| BsrGI | TGTACA | 1 cut(s) | 1384 |
| BsrI | ACTGG | 3 cut(s) | 463, 539, 1065 |
| BssAI | RCCGGY | 1 cut(s) | 428 |
| BssECI | CCNNGG | 6 cut(s) | 174, 477, 634, 1594, 1724, 1755 |
| BssT1I | CCWWGG | 4 cut(s) | 174, 477, 1594, 1724 |
| Bst2UI | CCWGG | 7 cut(s) | 203, 381, 507, 635, 1026, 1652, 1757 |
| Bst4CI | ACNGT | 6 cut(s) | 985, 1033, 1133, 1403, 1553, 1614 |
| Bst6I | CTCTTC | 1 cut(s) | 659 |
| BstAUI | TGTACA | 1 cut(s) | 1384 |
| BstC8I | GCNNGC | 7 cut(s) | 45, 309, 1376, 1430, 1518, 1674, 1890 |
| BstDEI | CTNAG | 6 cut(s) | 99, 162, 646, 1144, 1512, 1902 |
| BstDSI | CCRYGG | 1 cut(s) | 1594 |
| BstEII | GGTNACC | 1 cut(s) | 289 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 234 |
| BstF5I | GGATG | 4 cut(s) | 352, 574, 1313, 1534 |
| BstH2I | RGCGCY | 2 cut(s) | 38, 1375 |
| BstHHI | GCGC | 2 cut(s) | 37, 1374 |
| BstMAI | GTCTC | 4 cut(s) | 804, 1169, 1214, 1277 |
| BstMCI | CGRYCG | 2 cut(s) | 217, 392 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 376, 449, 1541, 1894 |
| BstNI | CCWGG | 7 cut(s) | 203, 381, 507, 635, 1026, 1652, 1757 |
| BstNSI | RCATGY | 1 cut(s) | 1432 |
| BstPI | GGTNACC | 1 cut(s) | 289 |
| BstSCI | CCNGG | 8 cut(s) | 201, 223, 379, 505, 633, 1024, 1650, 1755 |
| BstSFI | CTRYAG | 1 cut(s) | 1185 |
| BstSLI | GKGCMC | 2 cut(s) | 161, 466 |
| BstV1I | GCAGC | 8 cut(s) | 42, 45, 437, 634, 1168, 1447, 1556, 1807 |
| BstV2I | GAAGAC | 1 cut(s) | 1850 |
| BstX2I | RGATCY | 2 cut(s) | 526, 556 |
| BstYI | RGATCY | 2 cut(s) | 526, 556 |
| BstZI | CGGCCG | 1 cut(s) | 214 |
| BsuI | GTATCC | 1 cut(s) | 1622 |
| BsuRI | GGCC | 7 cut(s) | 201, 216, 223, 370, 505, 575, 807 |
| BtgI | CCRYGG | 1 cut(s) | 1594 |
| BtsCI | GGATG | 4 cut(s) | 352, 574, 1313, 1534 |
| BtsI | GCAGTG | 1 cut(s) | 1899 |
| BtsIMutI | CAGTG | 5 cut(s) | 371, 424, 546, 1619, 1899 |
| BveI | ACCTGC | 2 cut(s) | 97, 910 |
| Cac8I | GCNNGC | 7 cut(s) | 45, 309, 1376, 1430, 1518, 1674, 1890 |
| CaiI | CAGNNNCTG | 2 cut(s) | 187, 1888 |
| CciI | TCATGA | 2 cut(s) | 1467, 1681 |
| CfoI | GCGC | 2 cut(s) | 37, 1374 |
| Cfr10I | RCCGGY | 1 cut(s) | 428 |
| Cfr13I | GGNCC | 8 cut(s) | 199, 222, 227, 488, 503, 574, 872, 899 |
| Csp6I | GTAC | 5 cut(s) | 244, 402, 495, 972, 1385 |
| CviQI | GTAC | 5 cut(s) | 244, 402, 495, 972, 1385 |
| DdeI | CTNAG | 6 cut(s) | 99, 162, 646, 1144, 1512, 1902 |
| DraI | TTTAAA | 1 cut(s) | 1326 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1228, 1269 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1228, 1269 |
| EaeI | YGGCCR | 1 cut(s) | 214 |
| EagI | CGGCCG | 1 cut(s) | 214 |
| Eam1104I | CTCTTC | 1 cut(s) | 659 |
| EarI | CTCTTC | 1 cut(s) | 659 |
| EclXI | CGGCCG | 1 cut(s) | 214 |
| Eco130I | CCWWGG | 4 cut(s) | 174, 477, 1594, 1724 |
| Eco47I | GGWCC | 4 cut(s) | 227, 488, 872, 899 |
| Eco52I | CGGCCG | 1 cut(s) | 214 |
| Eco57I | CTGAAG | 4 cut(s) | 59, 519, 1844, 1865 |
| Eco91I | GGTNACC | 1 cut(s) | 289 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 234 |
| EcoO109I | RGGNCCY | 1 cut(s) | 899 |
| EcoO65I | GGTNACC | 1 cut(s) | 289 |
| EcoRII | CCWGG | 7 cut(s) | 201, 379, 505, 633, 1024, 1650, 1755 |
| EcoT14I | CCWWGG | 4 cut(s) | 174, 477, 1594, 1724 |
| ErhI | CCWWGG | 4 cut(s) | 174, 477, 1594, 1724 |
| Esp3I | CGTCTC | 1 cut(s) | 1277 |
| FaqI | GGGAC | 3 cut(s) | 109, 1275, 1706 |
| FauI | CCCGC | 1 cut(s) | 316 |
| FbaI | TGATCA | 3 cut(s) | 670, 1009, 1698 |
| FokI | GGATG | 4 cut(s) | 359, 581, 1300, 1541 |
| FspBI | CTAG | 4 cut(s) | 396, 626, 1116, 1725 |
| GlaI | GCGC | 2 cut(s) | 36, 1373 |
| GsuI | CTGGAG | 1 cut(s) | 209 |
| HaeII | RGCGCY | 2 cut(s) | 38, 1375 |
| HaeIII | GGCC | 7 cut(s) | 201, 216, 223, 370, 505, 575, 807 |
| HapII | CCGG | 7 cut(s) | 62, 213, 217, 225, 405, 429, 1369 |
| HhaI | GCGC | 2 cut(s) | 37, 1374 |
| Hin6I | GCGC | 2 cut(s) | 35, 1372 |
| HinP1I | GCGC | 2 cut(s) | 35, 1372 |
| HinfI | GANTC | 8 cut(s) | 97, 184, 764, 1229, 1438, 1471, 1568, 1636 |
| HpaII | CCGG | 7 cut(s) | 62, 213, 217, 225, 405, 429, 1369 |
| HphI | GGTGA | 3 cut(s) | 283, 1301, 1444 |
| Hpy166II | GTNNAC | 5 cut(s) | 402, 495, 719, 1036, 1709 |
| Hpy188I | TCNGA | 7 cut(s) | 183, 316, 535, 1147, 1299, 1831, 1884 |
| Hpy188III | TCNNGA | 8 cut(s) | 94, 188, 560, 1406, 1442, 1468, 1682, 1706 |
| Hpy8I | GTNNAC | 5 cut(s) | 402, 495, 719, 1036, 1709 |
| HpyAV | CCTTC | 3 cut(s) | 494, 923, 1797 |
| HpyCH4III | ACNGT | 6 cut(s) | 985, 1033, 1133, 1403, 1553, 1614 |
| HpyCH4IV | ACGT | 2 cut(s) | 1205, 1711 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 376, 449, 1541, 1894 |
| HpyF3I | CTNAG | 6 cut(s) | 99, 162, 646, 1144, 1512, 1902 |
| HpySE526I | ACGT | 2 cut(s) | 1205, 1711 |
| HspAI | GCGC | 2 cut(s) | 35, 1372 |
| Ksp22I | TGATCA | 3 cut(s) | 670, 1009, 1698 |
| LmnI | GCTCC | 4 cut(s) | 190, 509, 793, 1681 |
| Lsp1109I | GCAGC | 8 cut(s) | 42, 45, 437, 634, 1168, 1447, 1556, 1807 |
| LweI | GCATC | 7 cut(s) | 325, 559, 668, 1083, 1228, 1322, 1885 |
| MaeI | CTAG | 4 cut(s) | 396, 626, 1116, 1725 |
| MaeII | ACGT | 2 cut(s) | 1205, 1711 |
| MaeIII | GTNAC | 4 cut(s) | 289, 1102, 1289, 1619 |
| MboII | GAAGA | 5 cut(s) | 646, 904, 1831, 1850, 1871 |
| MfeI | CAATTG | 4 cut(s) | 194, 702, 835, 1043 |
| MflI | RGATCY | 2 cut(s) | 526, 556 |
| MhlI | GDGCHC | 2 cut(s) | 161, 466 |
| MlyI | GAGTC | 2 cut(s) | 91, 1238 |
| MmeI | TCCRAC | 4 cut(s) | 214, 324, 1506, 1545 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1155 |
| MseI | TTAA | 4 cut(s) | 585, 1325, 1484, 1500 |
| MspA1I | CMGCKG | 1 cut(s) | 1547 |
| MspI | CCGG | 7 cut(s) | 62, 213, 217, 225, 405, 429, 1369 |
| MspR9I | CCNGG | 8 cut(s) | 203, 225, 381, 507, 635, 1026, 1652, 1757 |
| MunI | CAATTG | 4 cut(s) | 194, 702, 835, 1043 |
| Mva1269I | GAATGC | 2 cut(s) | 73, 323 |
| MvaI | CCWGG | 7 cut(s) | 203, 381, 507, 635, 1026, 1652, 1757 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 376, 449, 1541, 1894 |
| NciI | CCSGG | 1 cut(s) | 225 |
| NcoI | CCATGG | 1 cut(s) | 1594 |
| NlaIV | GGNNCC | 4 cut(s) | 125, 576, 823, 1753 |
| NmuCI | GTSAC | 2 cut(s) | 289, 1289 |
| NspI | RCATGY | 1 cut(s) | 1432 |
| PaeI | GCATGC | 1 cut(s) | 1432 |
| PagI | TCATGA | 2 cut(s) | 1467, 1681 |
| PaqCI | CACCTGC | 1 cut(s) | 97 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 335 |
| PctI | GAATGC | 2 cut(s) | 73, 323 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1155 |
| PfeI | GAWTC | 6 cut(s) | 184, 764, 1438, 1471, 1568, 1636 |
| PleI | GAGTC | 2 cut(s) | 91, 1237 |
| PpsI | GAGTC | 2 cut(s) | 91, 1237 |
| PpuMI | RGGWCCY | 1 cut(s) | 899 |
| PshBI | ATTAAT | 1 cut(s) | 1484 |
| Psp1406I | AACGTT | 1 cut(s) | 1711 |
| Psp5II | RGGWCCY | 1 cut(s) | 899 |
| Psp6I | CCWGG | 7 cut(s) | 201, 379, 505, 633, 1024, 1650, 1755 |
| PspEI | GGTNACC | 1 cut(s) | 289 |
| PspGI | CCWGG | 7 cut(s) | 201, 379, 505, 633, 1024, 1650, 1755 |
| PspN4I | GGNNCC | 4 cut(s) | 125, 576, 823, 1753 |
| PspPI | GGNCC | 8 cut(s) | 199, 222, 227, 488, 503, 574, 872, 899 |
| PspPPI | RGGWCCY | 1 cut(s) | 899 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1040, 1072 |
| PstNI | CAGNNNCTG | 2 cut(s) | 187, 1888 |
| PsuI | RGATCY | 2 cut(s) | 526, 556 |
| PvuII | CAGCTG | 1 cut(s) | 1547 |
| RsaI | GTAC | 5 cut(s) | 245, 403, 496, 973, 1386 |
| RsaNI | GTAC | 5 cut(s) | 244, 402, 495, 972, 1385 |
| SaqAI | TTAA | 4 cut(s) | 585, 1325, 1484, 1500 |
| Sau96I | GGNCC | 8 cut(s) | 199, 222, 227, 488, 503, 574, 872, 899 |
| ScaI | AGTACT | 1 cut(s) | 973 |
| SchI | GAGTC | 2 cut(s) | 91, 1238 |
| ScrFI | CCNGG | 8 cut(s) | 203, 225, 381, 507, 635, 1026, 1652, 1757 |
| SduI | GDGCHC | 2 cut(s) | 161, 466 |
| SfaNI | GCATC | 7 cut(s) | 325, 559, 668, 1083, 1228, 1322, 1885 |
| SfcI | CTRYAG | 1 cut(s) | 1185 |
| SinI | GGWCC | 4 cut(s) | 227, 488, 872, 899 |
| SmlI | CTYRAG | 2 cut(s) | 827, 1080 |
| SmoI | CTYRAG | 2 cut(s) | 827, 1080 |
| SphI | GCATGC | 1 cut(s) | 1432 |
| SsiI | CCGC | 4 cut(s) | 309, 377, 413, 572 |
| SspMI | CTAG | 4 cut(s) | 396, 626, 1116, 1725 |
| StyD4I | CCNGG | 8 cut(s) | 201, 223, 379, 505, 633, 1024, 1650, 1755 |
| StyI | CCWWGG | 4 cut(s) | 174, 477, 1594, 1724 |
| TaaI | ACNGT | 6 cut(s) | 985, 1033, 1133, 1403, 1553, 1614 |
| TaiI | ACGT | 2 cut(s) | 1208, 1714 |
| TaqI | TCGA | 3 cut(s) | 6, 333, 1099 |
| TaqII | GACCGA | 1 cut(s) | 378 |
| TatI | WGTACW | 3 cut(s) | 494, 971, 1384 |
| TauI | GCSGC | 2 cut(s) | 379, 575 |
| TfiI | GAWTC | 6 cut(s) | 184, 764, 1438, 1471, 1568, 1636 |
| Tru1I | TTAA | 4 cut(s) | 585, 1325, 1484, 1500 |
| Tru9I | TTAA | 4 cut(s) | 585, 1325, 1484, 1500 |
| TscAI | CASTG | 5 cut(s) | 371, 424, 546, 1619, 1899 |
| TseFI | GTSAC | 2 cut(s) | 289, 1289 |
| TseI | GCWGC | 8 cut(s) | 55, 58, 425, 622, 1181, 1460, 1544, 1820 |
| Tsp45I | GTSAC | 2 cut(s) | 289, 1289 |
| TspDTI | ATGAA | 7 cut(s) | 73, 129, 363, 707, 1329, 1425, 1560 |
| TspGWI | ACGGA | 2 cut(s) | 480, 481 |
| TspRI | CASTG | 5 cut(s) | 371, 424, 546, 1619, 1899 |
| VpaK11BI | GGWCC | 4 cut(s) | 227, 488, 872, 899 |
| VspI | ATTAAT | 1 cut(s) | 1484 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 234 |
| XapI | RAATTY | 2 cut(s) | 855, 1283 |
| XceI | RCATGY | 1 cut(s) | 1432 |
| XmaJI | CCTAGG | 1 cut(s) | 1724 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1155 |
| XspI | CTAG | 4 cut(s) | 396, 626, 1116, 1725 |
| ZrmI | AGTACT | 1 cut(s) | 973 |