AT4G15680

Monothiol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0016500
Physical Location & Seq
Forward (+)
8931617 .. 8932317
701 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15680.1

Sequence Viewer

Length: 309 bp
ATGGATAAGCTACAGAAGATGATCTCCGAGAAGTCGGTAGTGATCTTTAGCAAAAACTCATGTTGCATGTCTCACACTATCAAGACTCTCTTCATAGACTTTGGCGTGAATCCAACGATCTATGAGCTAGATGAGATCAACAGAGGAAAGGAGATAGAGCAAGCATTGGCTCAGCTTGGCTGCAGCCCAACCGTGCCTGTGGTGTTTATTGGAGGGCAGCTTGTTGGTGGAGCCAATCAAGTCATGAGTCTCCATCTCAATCGCTCTCTGGTTCCTATGCTAAAGAGGGTTGGAGCACTATGGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

102

Amino Acids

11.25

Weight (kDa)

8.54

Isoelectric Point (pI)

53.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 13 - 75 1.1e-14 Glutaredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016500)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15670 AT4G15680 AT4G15690
fragaria_vesca FvH4_2g24950
malus_domestica MD03G1278300.v1.1 MD11G1300300.v1.1
prunus_persica Prupe.8G254500_v2.0.a1
pyrus_communis pycom03g22170 pycom11g26370
rosa_chinensis RchiOBHm_Chr6g0292891
rosa_roxburghii Rroxscaffold_7G00174610
rosa_rugosa Rorug06G0230600
rosa_samantha Rh6CG358100
rosa_wichuraiana Rw6G030000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AluBI AGCT 4 cut(s) 10, 127, 175, 220
AluI AGCT 4 cut(s) 10, 127, 175, 220
Alw21I GWGCWC 1 cut(s) 298
Alw26I GTCTC 2 cut(s) 75, 254
ApeKI GCWGC 3 cut(s) 180, 183, 217
Bbv12I GWGCWC 1 cut(s) 298
BbvI GCAGC 3 cut(s) 167, 195, 229
BccI CCATC 1 cut(s) 261
BcoDI GTCTC 2 cut(s) 75, 254
BfaI CTAG 1 cut(s) 128
BfmI CTRYAG 2 cut(s) 11, 181
BisI GCNGC 3 cut(s) 181, 184, 218
BlpI GCTNAGC 1 cut(s) 171
BlsI GCNGC 3 cut(s) 182, 185, 219
BmiI GGNNCC 2 cut(s) 232, 273
Bpu1102I GCTNAGC 1 cut(s) 171
BseMII CTCAG 1 cut(s) 185
BseXI GCAGC 3 cut(s) 167, 195, 229
BsiHKAI GWGCWC 1 cut(s) 298
BsmAI GTCTC 2 cut(s) 75, 254
Bsp1286I GDGCHC 1 cut(s) 298
Bsp143I GATC 4 cut(s) 21, 42, 117, 135
Bsp1720I GCTNAGC 1 cut(s) 171
BspCNI CTCAG 1 cut(s) 184
BspHI TCATGA 1 cut(s) 243
BspLI GGNNCC 2 cut(s) 232, 273
BspMAI CTGCAG 1 cut(s) 185
BssMI GATC 4 cut(s) 21, 42, 117, 135
Bst4CI ACNGT 1 cut(s) 193
Bst6I CTCTTC 1 cut(s) 95
BstC8I GCNNGC 1 cut(s) 162
BstDEI CTNAG 1 cut(s) 171
BstKTI GATC 4 cut(s) 24, 45, 120, 138
BstMAI GTCTC 2 cut(s) 75, 254
BstMBI GATC 4 cut(s) 21, 42, 117, 135
BstNSI RCATGY 1 cut(s) 70
BstSFI CTRYAG 2 cut(s) 11, 181
BstV1I GCAGC 3 cut(s) 167, 195, 229
Cac8I GCNNGC 1 cut(s) 162
CciI TCATGA 1 cut(s) 243
CviAII CATG 3 cut(s) 60, 67, 244
CviJI RGCY 9 cut(s) 10, 127, 170, 175, 180, 186, 220, 233, 304
CviKI_1 RGCY 9 cut(s) 10, 127, 170, 175, 180, 186, 220, 233, 304
DdeI CTNAG 1 cut(s) 171
DpnI GATC 4 cut(s) 23, 44, 119, 137
DpnII GATC 4 cut(s) 21, 42, 117, 135
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
FaeI CATG 3 cut(s) 63, 70, 247
FaiI YATR 7 cut(s) 61, 68, 95, 123, 245, 278, 301
FalI AAGNNNNNCTT 2 cut(s) 74, 106
FatI CATG 3 cut(s) 59, 66, 243
Fnu4HI GCNGC 3 cut(s) 181, 184, 218
Fsp4HI GCNGC 3 cut(s) 181, 184, 218
FspBI CTAG 1 cut(s) 128
GluI GCNGC 3 cut(s) 181, 184, 218
Hin1II CATG 3 cut(s) 63, 70, 247
HinfI GANTC 3 cut(s) 85, 109, 247
Hpy188I TCNGA 1 cut(s) 28
Hpy188III TCNNGA 2 cut(s) 82, 244
HpyCH4III ACNGT 1 cut(s) 193
HpyCH4V TGCA 2 cut(s) 66, 183
HpyF3I CTNAG 1 cut(s) 171
Hsp92II CATG 3 cut(s) 63, 70, 247
Kzo9I GATC 4 cut(s) 21, 42, 117, 135
LmnI GCTCC 2 cut(s) 230, 293
LpnPI CCDG 2 cut(s) 210, 254
Lsp1109I GCAGC 3 cut(s) 167, 195, 229
MaeI CTAG 1 cut(s) 128
MalI GATC 4 cut(s) 23, 44, 119, 137
MboI GATC 4 cut(s) 21, 42, 117, 135
MboII GAAGA 2 cut(s) 28, 82
MhlI GDGCHC 1 cut(s) 298
MlyI GAGTC 2 cut(s) 79, 256
MmeI TCCRAC 2 cut(s) 137, 271
MnlI CCTC 3 cut(s) 137, 206, 279
NdeII GATC 4 cut(s) 21, 42, 117, 135
NlaIII CATG 3 cut(s) 63, 70, 247
NlaIV GGNNCC 2 cut(s) 232, 273
NspI RCATGY 1 cut(s) 70
PagI TCATGA 1 cut(s) 243
PfeI GAWTC 1 cut(s) 109
PkrI GCNGC 3 cut(s) 182, 185, 219
PleI GAGTC 2 cut(s) 79, 255
PpsI GAGTC 2 cut(s) 79, 255
PspN4I GGNNCC 2 cut(s) 232, 273
PstI CTGCAG 1 cut(s) 185
SatI GCNGC 3 cut(s) 181, 184, 218
Sau3AI GATC 4 cut(s) 21, 42, 117, 135
SchI GAGTC 2 cut(s) 79, 256
SduI GDGCHC 1 cut(s) 298
SetI ASST 4 cut(s) 12, 129, 177, 222
SfcI CTRYAG 2 cut(s) 11, 181
SspMI CTAG 1 cut(s) 128
TaaI ACNGT 1 cut(s) 193
TfiI GAWTC 1 cut(s) 109
TseI GCWGC 3 cut(s) 180, 183, 217
TspDTI ATGAA 1 cut(s) 82
XceI RCATGY 1 cut(s) 70
XspI CTAG 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.