AT4G15690

Monothiol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0016500
Physical Location & Seq
Forward (+)
8934296 .. 8934961
666 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15690.1

Sequence Viewer

Length: 309 bp
ATGGAGAACCTACAGAAGATGATCTCTGAGAAGTCGGTAGTAATTTTTAGCAAGAACTCATGCTGCATGTCTCATACAATTAAGACTCTCTTCTTAGACTTTGGCGTGAACCCGACTATCTATGAGCTCGACGAGATCAACATAGGAAGGGAGATAGAGCAAGCATTGGCTCAGCTCGGATGCAGCCCGACCGTTCCGGTGGTGTTCATTGGAGGGCAGCTTGTTGGTGGAGCCAATCAAGTCATGAGTCTCCATCTCAACCGCTCCCTTGTTCCTATGCTTAAACGTGCTGGAGCATTATGGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

102

Amino Acids

11.21

Weight (kDa)

6.71

Isoelectric Point (pI)

62.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 13 - 75 1.8e-14 Glutaredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016500)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15670 AT4G15680 AT4G15690
fragaria_vesca FvH4_2g24950
malus_domestica MD03G1278300.v1.1 MD11G1300300.v1.1
prunus_persica Prupe.8G254500_v2.0.a1
pyrus_communis pycom03g22170 pycom11g26370
rosa_chinensis RchiOBHm_Chr6g0292891
rosa_roxburghii Rroxscaffold_7G00174610
rosa_rugosa Rorug06G0230600
rosa_samantha Rh6CG358100
rosa_wichuraiana Rw6G030000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 264
AciI CCGC 1 cut(s) 262
AluBI AGCT 3 cut(s) 127, 175, 220
AluI AGCT 3 cut(s) 127, 175, 220
Alw21I GWGCWC 1 cut(s) 129
Alw26I GTCTC 2 cut(s) 75, 254
ApeKI GCWGC 3 cut(s) 63, 183, 217
BanII GRGCYC 1 cut(s) 129
Bbv12I GWGCWC 1 cut(s) 129
BbvI GCAGC 3 cut(s) 50, 195, 229
BccI CCATC 1 cut(s) 261
BcoDI GTCTC 2 cut(s) 75, 254
BfmI CTRYAG 1 cut(s) 11
BisI GCNGC 3 cut(s) 64, 184, 218
BlpI GCTNAGC 1 cut(s) 171
BlsI GCNGC 3 cut(s) 65, 185, 219
BmiI GGNNCC 1 cut(s) 232
BmsI GCATC 1 cut(s) 170
Bpu1102I GCTNAGC 1 cut(s) 171
BsaWI WCCGGW 1 cut(s) 196
BseGI GGATG 1 cut(s) 185
BseMII CTCAG 2 cut(s) 18, 185
BseXI GCAGC 3 cut(s) 50, 195, 229
Bsh1285I CGRYCG 1 cut(s) 192
BsiEI CGRYCG 1 cut(s) 192
BsiHKAI GWGCWC 1 cut(s) 129
BsiSI CCGG 1 cut(s) 197
BsmAI GTCTC 2 cut(s) 75, 254
Bsp1286I GDGCHC 1 cut(s) 129
Bsp143I GATC 2 cut(s) 21, 135
Bsp1720I GCTNAGC 1 cut(s) 171
BspACI CCGC 1 cut(s) 262
BspCNI CTCAG 2 cut(s) 19, 184
BspHI TCATGA 1 cut(s) 243
BspLI GGNNCC 1 cut(s) 232
BsrBI CCGCTC 1 cut(s) 264
BssMI GATC 2 cut(s) 21, 135
Bst4CI ACNGT 1 cut(s) 193
Bst6I CTCTTC 1 cut(s) 95
BstC8I GCNNGC 1 cut(s) 162
BstDEI CTNAG 3 cut(s) 27, 94, 171
BstF5I GGATG 1 cut(s) 185
BstKTI GATC 2 cut(s) 24, 138
BstMAI GTCTC 2 cut(s) 75, 254
BstMBI GATC 2 cut(s) 21, 135
BstMCI CGRYCG 1 cut(s) 192
BstNSI RCATGY 1 cut(s) 70
BstSFI CTRYAG 1 cut(s) 11
BstV1I GCAGC 3 cut(s) 50, 195, 229
BtsCI GGATG 1 cut(s) 185
Cac8I GCNNGC 1 cut(s) 162
CciI TCATGA 1 cut(s) 243
CviAII CATG 3 cut(s) 60, 67, 244
CviJI RGCY 7 cut(s) 127, 170, 175, 186, 220, 233, 304
CviKI_1 RGCY 7 cut(s) 127, 170, 175, 186, 220, 233, 304
DdeI CTNAG 3 cut(s) 27, 94, 171
DpnI GATC 2 cut(s) 23, 137
DpnII GATC 2 cut(s) 21, 135
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
Ecl136II GAGCTC 1 cut(s) 127
Eco24I GRGCYC 1 cut(s) 129
Eco53kI GAGCTC 1 cut(s) 127
EcoICRI GAGCTC 1 cut(s) 127
EcoT38I GRGCYC 1 cut(s) 129
FaeI CATG 3 cut(s) 63, 70, 247
FaiI YATR 8 cut(s) 61, 68, 75, 123, 143, 245, 278, 301
FalI AAGNNNNNCTT 2 cut(s) 74, 106
FatI CATG 3 cut(s) 59, 66, 243
Fnu4HI GCNGC 3 cut(s) 64, 184, 218
FokI GGATG 1 cut(s) 192
FriOI GRGCYC 1 cut(s) 129
Fsp4HI GCNGC 3 cut(s) 64, 184, 218
GluI GCNGC 3 cut(s) 64, 184, 218
HapII CCGG 1 cut(s) 197
Hin1II CATG 3 cut(s) 63, 70, 247
HinfI GANTC 2 cut(s) 85, 247
HpaII CCGG 1 cut(s) 197
Hpy166II GTNNAC 1 cut(s) 109
Hpy188I TCNGA 2 cut(s) 28, 179
Hpy188III TCNNGA 1 cut(s) 244
Hpy8I GTNNAC 1 cut(s) 109
Hpy99I CGWCG 1 cut(s) 134
HpyAV CCTTC 1 cut(s) 141
HpyCH4III ACNGT 1 cut(s) 193
HpyCH4IV ACGT 1 cut(s) 286
HpyCH4V TGCA 2 cut(s) 66, 183
HpyF3I CTNAG 3 cut(s) 27, 94, 171
HpySE526I ACGT 1 cut(s) 286
Hsp92II CATG 3 cut(s) 63, 70, 247
Kzo9I GATC 2 cut(s) 21, 135
LmnI GCTCC 3 cut(s) 230, 269, 293
LpnPI CCDG 2 cut(s) 210, 276
Lsp1109I GCAGC 3 cut(s) 50, 195, 229
LweI GCATC 1 cut(s) 170
MaeII ACGT 1 cut(s) 286
MalI GATC 2 cut(s) 23, 137
MbiI CCGCTC 1 cut(s) 264
MboI GATC 2 cut(s) 21, 135
MboII GAAGA 2 cut(s) 28, 82
MhlI GDGCHC 1 cut(s) 129
MluCI AATT 2 cut(s) 42, 78
MlyI GAGTC 2 cut(s) 79, 256
MnlI CCTC 1 cut(s) 206
MseI TTAA 3 cut(s) 81, 282, 307
MspI CCGG 1 cut(s) 197
NdeII GATC 2 cut(s) 21, 135
NlaIII CATG 3 cut(s) 63, 70, 247
NlaIV GGNNCC 1 cut(s) 232
NspI RCATGY 1 cut(s) 70
PagI TCATGA 1 cut(s) 243
PkrI GCNGC 3 cut(s) 65, 185, 219
PleI GAGTC 2 cut(s) 79, 255
PpsI GAGTC 2 cut(s) 79, 255
Psp124BI GAGCTC 1 cut(s) 129
PspN4I GGNNCC 1 cut(s) 232
SacI GAGCTC 1 cut(s) 129
SaqAI TTAA 3 cut(s) 81, 282, 307
SatI GCNGC 3 cut(s) 64, 184, 218
Sau3AI GATC 2 cut(s) 21, 135
SchI GAGTC 2 cut(s) 79, 256
SduI GDGCHC 1 cut(s) 129
SetI ASST 5 cut(s) 12, 129, 177, 222, 289
SfaNI GCATC 1 cut(s) 170
SfcI CTRYAG 1 cut(s) 11
Sse9I AATT 2 cut(s) 42, 78
SsiI CCGC 1 cut(s) 262
SstI GAGCTC 1 cut(s) 129
TaaI ACNGT 1 cut(s) 193
TaiI ACGT 1 cut(s) 289
TaqI TCGA 1 cut(s) 129
TasI AATT 2 cut(s) 42, 78
Tru1I TTAA 3 cut(s) 81, 282, 307
Tru9I TTAA 3 cut(s) 81, 282, 307
TseI GCWGC 3 cut(s) 63, 183, 217
TspDTI ATGAA 1 cut(s) 196
XceI RCATGY 1 cut(s) 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.