Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0018716

Physical Location & Seq

Genomic Coordinates Forward (+)

10067810 .. 10069388

Gene Structure 1579 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G18190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1164 bp

ATGATGGAACTAGAATCAGAAACTCAAGAACTCCATCTTCACGTAAATGGCGAACCTGAAGGGAAATTTTCAACAGAAGAGAGAAGTCACAAGTACTCTTGGAGGTTAAGAGTGTCTCTCTATGTCACTCTCCTCTTAGCTGGAGAGACAATAGCCACTCTCTTAGGTAGACTTTACTACGAAAAAGGCGGTAAAAGCACATGGCTCGAAACCTTGGTTCAGCTTGTAGGGTTTCCTTTAACCCTTCCTTGCTATTATTACTTAAAGCCTGAGCCGTCCAAGACTAAAACCATTACCAAAAAAACTACTTCTTCCTTCTTGACACTATCTTTAGTGTATATTGGACTTGGCTTGCTTGTTGCTGGACATTGTATTTTGTACTCATTTGGGCTACTTTACCTTCCTGTCTCAACTTTCTCTTTGATCTCTGCGTCGCAATTGGCTTTTAACGCCGTCTTCTCTTACTTCCTAAACTCACAAAAAATCACACCATTTATACTCAATTCACTTGTTCTCTTAACCATATCTTCTACACTTCTTGTTATCCAACATGAACCAGAATCTCCCTCTTCTACTTCAAAGTCCGCAGCCAAGTCCAAGTATGTGATTGGATACATCTGCGCGGTCGGTAGCTCAGCTGGTTATTCTCTGGTGCTTTCTTTAACAGATTACGCGTTCGAAAAGATTCTAAAGAAATACACATTCAAGGCTATTTTAGACATGGCCACATATCCGTCTATGGTAGCTACTTGTGTAGTTGTGGTAGGACTTTTTGGAAGTGGTGGGTGGAAAAAGCTGAGTACAGAAATGGAAGAGTTTCAACTAGGGAAAAGCTCATACATTTTGATAAACATCGGTTCAACGATATCATGGCAAGCTTGTTTGATTGGAAGTGTTGGTTTGATTATCGAAGTTTCATCGCTTTTTTCCAATGTCATAAGCACTCTTTGTTTACCAGTTGTGCCTGTTCTTGCTGTTGTCTTCTTCCGTGATGAGATGAGTGGAATCAAGTTGGTTGCAATGTTTTTGGCCATCTGGGGATTTGTTTCTTATGGTTATCAGCATTATGTCAATGATAGAAAGCCAGAAGAAGACCAAGAGCTTCCTCAGTCTAAAGAAGAAGAAGAACAAAAACAAGTAGATACCATTCATGTCCAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005345 GO:0005575 GO:0006810 GO:0006863 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0015205 GO:0015851 GO:0016020 GO:0022857 GO:0043207 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0072530 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUNUT

Protein Analysis

387

Amino Acids

42.96

Weight (kDa)

6.2

Isoelectric Point (pI)

43.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUNUT	PF16913	37 - 361	2.3e-127	Purine nucleobase transmembrane transport

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0018716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18190
rosa_chinensis	RchiOBHm_Chr7g0210311
rosa_laevigata	RLG00000003050
rosa_multiflora	Rmu_sc0004503.1_g000004
rosa_roxburghii	Rroxscaffold_3G00248440
rosa_samantha	Rh7AG253500 Rh7CG270400 Rh7DG261100
rosa_wichuraiana	Rw7G021610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	169
AccII	CGCG	2 cut(s)	623, 674
AciI	CCGC	3 cut(s)	189, 585, 623
AcoI	YGGCCR	2 cut(s)	723, 1029
AcsI	RAATTY	1 cut(s)	65
AcuI	CTGAAG	1 cut(s)	78
AfaI	GTAC	3 cut(s)	95, 380, 802
AflIII	ACRYGT	1 cut(s)	672
AgsI	TTSAA	5 cut(s)	72, 579, 706, 821, 861
Alw26I	GTCTC	3 cut(s)	120, 140, 412
AoxI	GGCC	2 cut(s)	723, 1029
ApeKI	GCWGC	1 cut(s)	587
ApoI	RAATTY	1 cut(s)	65
Asp700I	GAANNNNTTC	2 cut(s)	684, 816
AspLEI	GCGC	1 cut(s)	623
AsuII	TTCGAA	1 cut(s)	678
BalI	TGGCCA	2 cut(s)	725, 1031
BbsI	GAAGAC	3 cut(s)	448, 973, 1098
BbvI	GCAGC	1 cut(s)	599
BccI	CCATC	2 cut(s)	42, 1040
BceAI	ACGGC	2 cut(s)	259, 437
BcgI	CGANNNNNNTGC	2 cut(s)	187, 221
BciVI	GTATCC	1 cut(s)	605
BcoDI	GTCTC	3 cut(s)	120, 140, 412
BfaI	CTAG	2 cut(s)	11, 824
BfuI	GTATCC	1 cut(s)	605
BisI	GCNGC	1 cut(s)	588
BlpI	GCTNAGC	1 cut(s)	634
BlsI	GCNGC	1 cut(s)	589
BmcAI	AGTACT	1 cut(s)	95
BpiI	GAAGAC	3 cut(s)	448, 973, 1098
BplI	GAGNNNNNCTC	2 cut(s)	102, 134
BpmI	CTGGAG	1 cut(s)	162
Bpu10I	CCTNAGC	1 cut(s)	270
Bpu1102I	GCTNAGC	1 cut(s)	634
Bpu14I	TTCGAA	1 cut(s)	678
BpuEI	CTTGAG	1 cut(s)	9
BsaAI	YACGTR	1 cut(s)	43
BsaBI	GATNNNNATC	1 cut(s)	851
BsaJI	CCNNGG	1 cut(s)	213
Bse1I	ACTGG	1 cut(s)	956
Bse3DI	GCAATG	1 cut(s)	1026
Bse8I	GATNNNNATC	1 cut(s)	851
BseDI	CCNNGG	1 cut(s)	213
BseJI	GATNNNNATC	1 cut(s)	851
BseMI	GCAATG	1 cut(s)	1026
BseMII	CTCAG	4 cut(s)	261, 648, 788, 1121
BseNI	ACTGG	1 cut(s)	956
BseRI	GAGGAG	1 cut(s)	122
BseXI	GCAGC	1 cut(s)	599
Bsh1236I	CGCG	2 cut(s)	623, 674
Bsh1285I	CGRYCG	1 cut(s)	627
BshFI	GGCC	2 cut(s)	725, 1031
BsiEI	CGRYCG	1 cut(s)	627
BsmAI	GTCTC	3 cut(s)	120, 140, 412
BsnI	GGCC	2 cut(s)	725, 1031
Bsp119I	TTCGAA	1 cut(s)	678
Bsp143I	GATC	1 cut(s)	423
Bsp1720I	GCTNAGC	1 cut(s)	634
BspACI	CCGC	3 cut(s)	189, 585, 623
BspANI	GGCC	2 cut(s)	725, 1031
BspCNI	CTCAG	4 cut(s)	262, 647, 789, 1120
BspFNI	CGCG	2 cut(s)	623, 674
BspT104I	TTCGAA	1 cut(s)	678
BsrDI	GCAATG	1 cut(s)	1026
BsrI	ACTGG	1 cut(s)	956
BssECI	CCNNGG	1 cut(s)	213
BssMI	GATC	1 cut(s)	423
BssT1I	CCWWGG	1 cut(s)	213
Bst6I	CTCTTC	3 cut(s)	72, 574, 807
BstBAI	YACGTR	1 cut(s)	43
BstBI	TTCGAA	1 cut(s)	678
BstC8I	GCNNGC	2 cut(s)	353, 876
BstDEI	CTNAG	7 cut(s)	136, 163, 270, 634, 797, 1107, 1161
BstFNI	CGCG	2 cut(s)	623, 674
BstHHI	GCGC	1 cut(s)	623
BstKTI	GATC	1 cut(s)	426
BstMAI	GTCTC	3 cut(s)	120, 140, 412
BstMBI	GATC	1 cut(s)	423
BstMCI	CGRYCG	1 cut(s)	627
BstMWI	GCNNNNNNNGC	2 cut(s)	195, 449
BstUI	CGCG	2 cut(s)	623, 674
BstV1I	GCAGC	1 cut(s)	599
BstV2I	GAAGAC	3 cut(s)	448, 973, 1098
BsuI	GTATCC	1 cut(s)	605
BsuRI	GGCC	2 cut(s)	725, 1031
BtgZI	GCGATG	1 cut(s)	903
Cac8I	GCNNGC	2 cut(s)	353, 876
CfoI	GCGC	1 cut(s)	623
CseI	GACGC	1 cut(s)	420
Csp6I	GTAC	3 cut(s)	94, 379, 801
CviAII	CATG	5 cut(s)	201, 551, 721, 870, 1151
CviQI	GTAC	3 cut(s)	94, 379, 801
DdeI	CTNAG	7 cut(s)	136, 163, 270, 634, 797, 1107, 1161
DpnI	GATC	1 cut(s)	425
DpnII	GATC	1 cut(s)	423
EaeI	YGGCCR	2 cut(s)	723, 1029
Eam1104I	CTCTTC	3 cut(s)	72, 574, 807
EarI	CTCTTC	3 cut(s)	72, 574, 807
Eco130I	CCWWGG	1 cut(s)	213
Eco32I	GATATC	1 cut(s)	867
Eco57I	CTGAAG	1 cut(s)	78
EcoRV	GATATC	1 cut(s)	867
EcoT14I	CCWWGG	1 cut(s)	213
ErhI	CCWWGG	1 cut(s)	213
FaeI	CATG	5 cut(s)	204, 554, 724, 873, 1154
FatI	CATG	5 cut(s)	200, 550, 720, 869, 1150
FblI	GTMKAC	1 cut(s)	169
Fnu4HI	GCNGC	1 cut(s)	588
Fsp4HI	GCNGC	1 cut(s)	588
FspBI	CTAG	2 cut(s)	11, 824
GlaI	GCGC	1 cut(s)	622
GluI	GCNGC	1 cut(s)	588
GsuI	CTGGAG	1 cut(s)	162
HaeIII	GGCC	2 cut(s)	725, 1031
HgaI	GACGC	1 cut(s)	420
HhaI	GCGC	1 cut(s)	623
Hin1II	CATG	5 cut(s)	204, 554, 724, 873, 1154
Hin6I	GCGC	1 cut(s)	621
HinP1I	GCGC	1 cut(s)	621
HindIII	AAGCTT	2 cut(s)	876, 1158
HinfI	GANTC	4 cut(s)	14, 560, 685, 1005
Hpy166II	GTNNAC	2 cut(s)	170, 953
Hpy188I	TCNGA	1 cut(s)	19
Hpy188III	TCNNGA	2 cut(s)	26, 319
Hpy8I	GTNNAC	2 cut(s)	170, 953
Hpy99I	CGWCG	1 cut(s)	436
HpyAV	CCTTC	4 cut(s)	53, 254, 325, 410
HpyCH4IV	ACGT	1 cut(s)	42
HpyCH4V	TGCA	1 cut(s)	1019
HpyF10VI	GCNNNNNNNGC	2 cut(s)	195, 449
HpyF3I	CTNAG	7 cut(s)	136, 163, 270, 634, 797, 1107, 1161
HpySE526I	ACGT	1 cut(s)	42
Hsp92II	CATG	5 cut(s)	204, 554, 724, 873, 1154
HspAI	GCGC	1 cut(s)	621
Kzo9I	GATC	1 cut(s)	423
Lsp1109I	GCAGC	1 cut(s)	599
MaeI	CTAG	2 cut(s)	11, 824
MaeII	ACGT	1 cut(s)	42
MaeIII	GTNAC	2 cut(s)	86, 124
MalI	GATC	1 cut(s)	425
MboI	GATC	1 cut(s)	423
MfeI	CAATTG	1 cut(s)	437
MlsI	TGGCCA	2 cut(s)	725, 1031
MluCI	AATT	3 cut(s)	65, 437, 502
MluI	ACGCGT	1 cut(s)	672
MluNI	TGGCCA	2 cut(s)	725, 1031
MmeI	TCCRAC	1 cut(s)	571
MnlI	CCTC	4 cut(s)	96, 143, 577, 1116
Mox20I	TGGCCA	2 cut(s)	725, 1031
MroXI	GAANNNNTTC	2 cut(s)	684, 816
MscI	TGGCCA	2 cut(s)	725, 1031
MseI	TTAA	6 cut(s)	107, 239, 263, 447, 518, 662
MslI	CAYNNNNRTG	1 cut(s)	45
Msp20I	TGGCCA	2 cut(s)	725, 1031
MspA1I	CMGCKG	1 cut(s)	638
MunI	CAATTG	1 cut(s)	437
MvnI	CGCG	2 cut(s)	623, 674
MwoI	GCNNNNNNNGC	2 cut(s)	195, 449
NdeII	GATC	1 cut(s)	423
NlaIII	CATG	5 cut(s)	204, 554, 724, 873, 1154
NmuCI	GTSAC	2 cut(s)	86, 124
NspV	TTCGAA	1 cut(s)	678
PcsI	WCGNNNNNNNCGW	1 cut(s)	48
PdmI	GAANNNNTTC	2 cut(s)	684, 816
PfeI	GAWTC	4 cut(s)	14, 560, 685, 1005
PkrI	GCNGC	1 cut(s)	589
Ppu21I	YACGTR	1 cut(s)	43
PvuII	CAGCTG	1 cut(s)	638
RsaI	GTAC	3 cut(s)	95, 380, 802
RsaNI	GTAC	3 cut(s)	94, 379, 801
RseI	CAYNNNNRTG	1 cut(s)	45
SaqAI	TTAA	6 cut(s)	107, 239, 263, 447, 518, 662
SatI	GCNGC	1 cut(s)	588
Sau3AI	GATC	1 cut(s)	423
ScaI	AGTACT	1 cut(s)	95
SfuI	TTCGAA	1 cut(s)	678
SmiMI	CAYNNNNRTG	1 cut(s)	45
SmlI	CTYRAG	1 cut(s)	24
SmoI	CTYRAG	1 cut(s)	24
Sse9I	AATT	3 cut(s)	65, 437, 502
SsiI	CCGC	3 cut(s)	189, 585, 623
SspMI	CTAG	2 cut(s)	11, 824
StyI	CCWWGG	1 cut(s)	213
TaiI	ACGT	1 cut(s)	45
TaqI	TCGA	3 cut(s)	207, 678, 909
TasI	AATT	3 cut(s)	65, 437, 502
TatI	WGTACW	3 cut(s)	93, 378, 800
TfiI	GAWTC	4 cut(s)	14, 560, 685, 1005
Tru1I	TTAA	6 cut(s)	107, 239, 263, 447, 518, 662
Tru9I	TTAA	6 cut(s)	107, 239, 263, 447, 518, 662
TseFI	GTSAC	2 cut(s)	86, 124
TseI	GCWGC	1 cut(s)	587
Tsp45I	GTSAC	2 cut(s)	86, 124
TspDTI	ATGAA	3 cut(s)	567, 906, 1139
TspGWI	ACGGA	2 cut(s)	723, 977
XapI	RAATTY	1 cut(s)	65
XmiI	GTMKAC	1 cut(s)	169
XmnI	GAANNNNTTC	2 cut(s)	684, 816
XspI	CTAG	2 cut(s)	11, 824
ZrmI	AGTACT	1 cut(s)	95

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.