AT4G21200

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0009862
Physical Location & Seq
Forward (+)
11302682 .. 11306770
4089 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G21200.3

Sequence Viewer

Length: 1017 bp
ATGGATCCACCATTCAACGAAATATACAATAACCTTTTGTATAATCAGATCACAAAGAAAGATAACGATGTTTCTGAAATACCCTTTAGCTTCTCAGTCACAGCCGTCGTCGAGGAGGTGGAGCTTCCTGTGATTGACGTCAGCCGTTTGATTGATGGAGCCGAGGAGGAGAGAGAGAAATGTAAGGAAGCGATTGCGAGAGCTTCGAGGGAGTGGGGATTTTTTCAAGTGATAAACCATGGAATATCAATGGATGTGTTGGAGAAGATGAGACAAGAGCAAATTAGGGTCTTTAGAGAGCCTTTTGACAAGAAAAGTAAGTCGGAGAAATTTTCCGCCGGGAGTTACCGGTGGGGAACGCCGTCAGCCACTTCTATCCGGCAGCTTTCTTGGTCAGAAGCTTTTCATGTTCCCATGACAGATATTTCTGACAACAAGGACTTTACTACTCTCAGCTCAACAATGGAGAAATTTGCTTCGGAATCAGAGGCATTAGCATATATGTTGGCAGAGGTTCTTGCAGAAAAATCTGGACAAAATTCAAGTTTCTTCAAAGAAAACTGTGTGAGAAATACATGTTATCTAAGGATGAACCGATATCCACCTTGTCCCAAACCATCGGAGGTGTACGGATTAATGCCACACACGGACAGTGATTTCCTCACAATCTTGTATCAAGATCAAGTCGGAGGACTCCAACTTATCAAAGACAATAGATGGATCGCTGTTAAACCTAATCCTAAAGCTCTCATTATCAATATTGGTGACTTATTTCAGGCATGGAGCAATGGCATGTACAAAAGTGTTGAACACCGTGTGATGACGAACCCAAAGGTGGAGAGATTCTCAACGGCTTATTTTATGTGTCCATCATACGACGCCGTTATAGAGTGTTCAAGTGATCGTCCTGCTTATAGAAATTTCAGCTTCAGAGAATTCAGACAACAAGTTCAAGAAGATGTTAAGAAGTTTGGTTTTAAAGTTGGCCTTCCTAGGTTCCTTAATCACGTCTACTAA

Protein Analysis

338

Amino Acids

39.09

Weight (kDa)

5.88

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 42 - 140 2.8e-19 non-haem dioxygenase in morphine synthesis N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 141
AccI GTMKAC 1 cut(s) 1011
AciI CCGC 1 cut(s) 336
AclWI GGATC 2 cut(s) 12, 728
AcsI RAATTY 5 cut(s) 329, 470, 538, 919, 935
AcuI CTGAAG 1 cut(s) 913
AcyI GRCGYC 2 cut(s) 138, 879
AdeI CACNNNGTG 1 cut(s) 817
AfaI GTAC 2 cut(s) 629, 797
AfiI CCNNNNNNNGG 1 cut(s) 835
AflIII ACRYGT 1 cut(s) 575
AgeI ACCGGT 1 cut(s) 348
AgsI TTSAA 7 cut(s) 16, 227, 543, 553, 809, 897, 953
AjiI CACGTC 1 cut(s) 1009
AluBI AGCT 8 cut(s) 90, 124, 203, 385, 401, 456, 746, 927
AluI AGCT 8 cut(s) 90, 124, 203, 385, 401, 456, 746, 927
Alw26I GTCTC 1 cut(s) 265
AlwI GGATC 2 cut(s) 12, 728
AoxI GGCC 1 cut(s) 985
ApeKI GCWGC 1 cut(s) 382
ApoI RAATTY 5 cut(s) 329, 470, 538, 919, 935
AseI ATTAAT 1 cut(s) 635
AsiGI ACCGGT 1 cut(s) 348
Asp700I GAANNNNTTC 1 cut(s) 402
AspA2I CCTAGG 1 cut(s) 992
AsuC2I CCSGG 1 cut(s) 340
AsuHPI GGTGA 1 cut(s) 776
AvrII CCTAGG 1 cut(s) 992
BamHI GGATCC 1 cut(s) 4
BbvI GCAGC 1 cut(s) 394
BccI CCATC 4 cut(s) 149, 625, 711, 877
BceAI ACGGC 5 cut(s) 89, 129, 346, 866, 867
BcnI CCSGG 1 cut(s) 340
BcoDI GTCTC 1 cut(s) 265
BfaI CTAG 1 cut(s) 993
BisI GCNGC 1 cut(s) 383
BlnI CCTAGG 1 cut(s) 992
BlsI GCNGC 1 cut(s) 384
Bme1390I CCNGG 1 cut(s) 340
BmgBI CACGTC 1 cut(s) 1009
BmiI GGNNCC 3 cut(s) 6, 160, 998
BmrFI CCNGG 1 cut(s) 340
BplI GAGNNNNNCTC 2 cut(s) 830, 862
BpuMI CCSGG 1 cut(s) 340
BsaHI GRCGYC 2 cut(s) 138, 879
BsaJI CCNNGG 3 cut(s) 162, 238, 992
BsaWI WCCGGW 1 cut(s) 348
Bsc4I CCNNNNNNNGG 1 cut(s) 835
Bse118I RCCGGY 1 cut(s) 348
Bse3DI GCAATG 1 cut(s) 793
BseDI CCNNGG 3 cut(s) 162, 238, 992
BseGI GGATG 2 cut(s) 259, 594
BseLI CCNNNNNNNGG 1 cut(s) 835
BseMI GCAATG 1 cut(s) 793
BseMII CTCAG 2 cut(s) 108, 466
BseRI GAGGAG 3 cut(s) 128, 179, 182
BseXI GCAGC 1 cut(s) 394
BshFI GGCC 1 cut(s) 987
BshTI ACCGGT 1 cut(s) 348
BsiSI CCGG 3 cut(s) 339, 349, 379
BslFI GGGAC 1 cut(s) 594
BslI CCNNNNNNNGG 1 cut(s) 835
BsmAI GTCTC 1 cut(s) 265
BsmFI GGGAC 1 cut(s) 594
BsnI GGCC 1 cut(s) 987
Bsp1407I TGTACA 1 cut(s) 795
Bsp143I GATC 5 cut(s) 4, 48, 679, 720, 901
Bsp19I CCATGG 1 cut(s) 238
BspACI CCGC 1 cut(s) 336
BspANI GGCC 1 cut(s) 987
BspCNI CTCAG 2 cut(s) 107, 465
BspLI GGNNCC 3 cut(s) 6, 160, 998
BspPI GGATC 2 cut(s) 12, 728
BsrDI GCAATG 1 cut(s) 793
BsrFI RCCGGY 1 cut(s) 348
BsrGI TGTACA 1 cut(s) 795
BssAI RCCGGY 1 cut(s) 348
BssECI CCNNGG 3 cut(s) 162, 238, 992
BssMI GATC 5 cut(s) 4, 48, 679, 720, 901
BssNI GRCGYC 2 cut(s) 138, 879
BssT1I CCWWGG 2 cut(s) 238, 992
Bst4CI ACNGT 3 cut(s) 563, 653, 815
BstACI GRCGYC 2 cut(s) 138, 879
BstAUI TGTACA 1 cut(s) 795
BstDEI CTNAG 3 cut(s) 94, 452, 584
BstDSI CCRYGG 1 cut(s) 238
BstF5I GGATG 2 cut(s) 259, 594
BstKTI GATC 5 cut(s) 7, 51, 682, 723, 904
BstMAI GTCTC 1 cut(s) 265
BstMBI GATC 5 cut(s) 4, 48, 679, 720, 901
BstNSI RCATGY 2 cut(s) 579, 796
BstSCI CCNGG 1 cut(s) 338
BstV1I GCAGC 1 cut(s) 394
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuRI GGCC 1 cut(s) 987
BtgI CCRYGG 1 cut(s) 238
BtrI CACGTC 1 cut(s) 1009
BtsCI GGATG 2 cut(s) 259, 594
BtsIMutI CAGTG 1 cut(s) 658
Cfr10I RCCGGY 1 cut(s) 348
CseI GACGC 1 cut(s) 887
Csp6I GTAC 2 cut(s) 628, 796
CspAI ACCGGT 1 cut(s) 348
CviAII CATG 6 cut(s) 239, 407, 415, 576, 780, 793
CviQI GTAC 2 cut(s) 628, 796
DdeI CTNAG 3 cut(s) 94, 452, 584
DpnI GATC 5 cut(s) 6, 50, 681, 722, 903
DpnII GATC 5 cut(s) 4, 48, 679, 720, 901
DraI TTTAAA 1 cut(s) 979
DraIII CACNNNGTG 1 cut(s) 817
EciI GGCGGA 1 cut(s) 325
Eco130I CCWWGG 2 cut(s) 238, 992
Eco32I GATATC 1 cut(s) 599
Eco57I CTGAAG 1 cut(s) 913
EcoRI GAATTC 1 cut(s) 935
EcoRV GATATC 1 cut(s) 599
EcoT14I CCWWGG 2 cut(s) 238, 992
ErhI CCWWGG 2 cut(s) 238, 992
FaeI CATG 6 cut(s) 242, 410, 418, 579, 783, 796
FalI AAGNNNNNCTT 2 cut(s) 972, 1004
FaqI GGGAC 1 cut(s) 594
FatI CATG 6 cut(s) 238, 406, 414, 575, 779, 792
FblI GTMKAC 1 cut(s) 1011
Fnu4HI GCNGC 1 cut(s) 383
FokI GGATG 2 cut(s) 266, 601
Fsp4HI GCNGC 1 cut(s) 383
FspBI CTAG 1 cut(s) 993
GluI GCNGC 1 cut(s) 383
HaeIII GGCC 1 cut(s) 987
HapII CCGG 3 cut(s) 339, 349, 379
HgaI GACGC 1 cut(s) 887
Hin1I GRCGYC 2 cut(s) 138, 879
Hin1II CATG 6 cut(s) 242, 410, 418, 579, 783, 796
HindIII AAGCTT 1 cut(s) 399
HinfI GANTC 3 cut(s) 482, 693, 843
HpaII CCGG 3 cut(s) 339, 349, 379
HphI GGTGA 1 cut(s) 776
Hpy166II GTNNAC 2 cut(s) 628, 1012
Hpy188III TCNNGA 3 cut(s) 531, 677, 953
Hpy8I GTNNAC 2 cut(s) 628, 1012
Hpy99I CGWCG 3 cut(s) 110, 113, 881
HpyAV CCTTC 1 cut(s) 998
HpyCH4III ACNGT 3 cut(s) 563, 653, 815
HpyCH4IV ACGT 2 cut(s) 138, 1008
HpyCH4V TGCA 1 cut(s) 521
HpyF3I CTNAG 3 cut(s) 94, 452, 584
HpySE526I ACGT 2 cut(s) 138, 1008
Hsp92I GRCGYC 2 cut(s) 138, 879
Hsp92II CATG 6 cut(s) 242, 410, 418, 579, 783, 796
Kzo9I GATC 5 cut(s) 4, 48, 679, 720, 901
LmnI GCTCC 3 cut(s) 121, 158, 783
LpnPI CCDG 7 cut(s) 141, 352, 362, 392, 516, 761, 921
Lsp1109I GCAGC 1 cut(s) 394
MaeI CTAG 1 cut(s) 993
MaeII ACGT 2 cut(s) 138, 1008
MaeIII GTNAC 3 cut(s) 97, 344, 764
MalI GATC 5 cut(s) 6, 50, 681, 722, 903
MboI GATC 5 cut(s) 4, 48, 679, 720, 901
MboII GAAGA 3 cut(s) 277, 541, 968
MflI RGATCY 1 cut(s) 4
MluCI AATT 6 cut(s) 282, 329, 470, 538, 919, 935
MlyI GAGTC 1 cut(s) 687
MmeI TCCRAC 4 cut(s) 240, 303, 667, 721
MroXI GAANNNNTTC 1 cut(s) 402
MseI TTAA 5 cut(s) 635, 729, 963, 978, 1002
MspI CCGG 3 cut(s) 339, 349, 379
MspR9I CCNGG 1 cut(s) 340
NciI CCSGG 1 cut(s) 340
NcoI CCATGG 1 cut(s) 238
NdeII GATC 5 cut(s) 4, 48, 679, 720, 901
NlaIII CATG 6 cut(s) 242, 410, 418, 579, 783, 796
NlaIV GGNNCC 3 cut(s) 6, 160, 998
NmeAIII GCCGAG 1 cut(s) 187
NmuCI GTSAC 2 cut(s) 97, 764
NspI RCATGY 2 cut(s) 579, 796
PciI ACATGT 1 cut(s) 575
PdmI GAANNNNTTC 1 cut(s) 402
PfeI GAWTC 2 cut(s) 482, 843
PinAI ACCGGT 1 cut(s) 348
PkrI GCNGC 1 cut(s) 384
PleI GAGTC 1 cut(s) 687
PpsI GAGTC 1 cut(s) 687
PscI ACATGT 1 cut(s) 575
PshBI ATTAAT 1 cut(s) 635
PspN4I GGNNCC 3 cut(s) 6, 160, 998
PsuI RGATCY 1 cut(s) 4
RsaI GTAC 2 cut(s) 629, 797
RsaNI GTAC 2 cut(s) 628, 796
SaqAI TTAA 5 cut(s) 635, 729, 963, 978, 1002
SatI GCNGC 1 cut(s) 383
Sau3AI GATC 5 cut(s) 4, 48, 679, 720, 901
SchI GAGTC 1 cut(s) 687
ScrFI CCNGG 1 cut(s) 340
Sse9I AATT 6 cut(s) 282, 329, 470, 538, 919, 935
SsiI CCGC 1 cut(s) 336
SspI AATATT 1 cut(s) 760
SspMI CTAG 1 cut(s) 993
StyD4I CCNGG 1 cut(s) 338
StyI CCWWGG 2 cut(s) 238, 992
TaaI ACNGT 3 cut(s) 563, 653, 815
TaiI ACGT 2 cut(s) 141, 1011
TaqI TCGA 2 cut(s) 111, 206
TasI AATT 6 cut(s) 282, 329, 470, 538, 919, 935
TatI WGTACW 1 cut(s) 795
TfiI GAWTC 2 cut(s) 482, 843
Tru1I TTAA 5 cut(s) 635, 729, 963, 978, 1002
Tru9I TTAA 5 cut(s) 635, 729, 963, 978, 1002
TscAI CASTG 1 cut(s) 658
TseFI GTSAC 2 cut(s) 97, 764
TseI GCWGC 1 cut(s) 382
Tsp45I GTSAC 2 cut(s) 97, 764
TspDTI ATGAA 2 cut(s) 395, 605
TspGWI ACGGA 2 cut(s) 645, 662
TspRI CASTG 1 cut(s) 658
VspI ATTAAT 1 cut(s) 635
XapI RAATTY 5 cut(s) 329, 470, 538, 919, 935
XceI RCATGY 2 cut(s) 579, 796
XmaJI CCTAGG 1 cut(s) 992
XmiI GTMKAC 1 cut(s) 1011
XmnI GAANNNNTTC 1 cut(s) 402
XspI CTAG 1 cut(s) 993
ZraI GACGTC 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.