Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007155

Physical Location & Seq

Genomic Coordinates Reverse (-)

12655059 .. 12658348

Gene Structure 3290 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G24490.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGCACGGTCGTCCAAGGAATGCTTCTAAGCCAGAAGAGGAAGCAGCTTCAGCTGCTAAAGCTGTTCAGCTTCGCTCTCTCCAGTCTCAGTTTATGACGAATCATCACGATAAAATTTATACCAATGAAGCTATTGAGTTAAGCACGAAGCTTCTAGAAATCAATCCGGAGGCGTACACCGCATGGAACTACCGGAAGCTTGCTGTGGAGGATCGCCTTGCCAGAATTGAGCCTGATCCAAACTTGGTCAGCGCAATTCTTGATGAAGAACTCAGAGTGGTAGAAAGTGCTTTGAGGCAGAATTTCAAGTCCTATGGTGCTTGGCATCATCGAAAGTGGGTTTTGAGTAAAGGGCATTCATCCGTAGGGAATGAATTGAGACTTTTGGAAAAATTCCAGAAGCTGGATTCCAGAAATTTTCATGCTTGGAACTATCGCAGGTTTGTTGTAGAGCTAACCAACAGATCAGAACAGGATGAGTTGCAGTATACAGATGATATGATCAATAACAATTTCAGCAACTATTCTGCATGGCATAATCGTAGTGTACTTCTATCAAGTTTGTTGGCACAAAATGCTGATGGGTTTATGCCAAATATAAAGATTCCTGAGGAATATGACTTTGTACATTCGGCTATTTTTACGGAACCAGATGACCAAAGTGGCTGGTTTTATCATCTTTGGCTTCTTGACCAAACTCTTAATGTGGAGACTCCTCTTCTCACTTCCTCATGGCCTTCACATGGTTCAAGTATCATTCTGTCTGGAGCTGGGTGCTTGAGTGGCTCTTCATCTATGTTCACTACTTTTTGTTCTGAGTCGGGTTCTTTTCCACTGATTCTCTACTTTGACCAAGCTGTTGGTGGAGTAAGCTCATCTACTGTTACAATTGATTCTGAACTAAAAGGAAACGAGGGCCTTGTTTGGGAACCAATTCCGAACAAAAATTCTCAGGTGTCCTGTGTATGGGTTGCTCGTCTGAAATATGTCAGTTCAGATCCTTGCGAATACAAAGTGAAGATCAGAGTTGGGAACTCTCCAGGAATCGTTTCTTCCAGAGGATATAACTTCAACGCACCTTATGAGTTTGTCTTTACAGCCCATGTTCATGATACCGTCGAAGATTCTCAAGAAGGCATTGTTTCATGGACGGATGGATTTGATATTTGGGATGCGAAGTCAAAGGATTTGAATTCTCTTGTCACCTTGGATCGGTTAAATGCTGAGATGGATTTTAAATGGCGTCAGGAAGCTATAGATTCTGAGGTTGAATGTTTCGGTATACTGCCTGACAGCAAAATTGGAAAGCTCACTCTTGCAAGGCTTTTGATGGCTCGTGAAGCTATGGTATCGGATGATGCTGTCAAGGGTGTTCACTATGAAGAAATCCTTCAGCTGTATAACGATTTGATGGCGCTGGATTCTTCACACTACCAGTACTACAAGGATGAGCACAGCAAAGCTTTTCTCCACAAGGTGACTTCAAGCAGTGAATCTTTGTCAAGACACCTTTTGCGATATAGGGATATGAACAATCTTGTATGTCTACGGCTAAATAACTTATCACTATCTCGGATAGCCTCTGTTGAGAAGTTGCTGTTTGTCCAAATGTTAGACCTTAGTCACAATGAGCTTCATTCCACTGAAGGATTGGAGGCAATGCAACTTCTCTCTTGTCTAAATCTGAGTCACAACAGAATCCGGAGTTTTTCAGCGCTGGACTCTCTAAGACATGTGAAGCAGCTGAAAGTGTTGGATGTTTCACATAACCACATTGGCAAGCACTCAGTGGACACAACTAGATACCTTTGTTCTTCACCGCTCTCTAATTCAGAGTTGGGTCAGGATGATGTAGGAAAACAGAATCCTGGATTGGTTACGAAGTACTGGGATGCGTATTGCGTGTTAACAGATTTGAATCTGAAACAGTTAGATATAGCAGGAAATGAAATTGCAGGGGAGGAATTCAGCTCTTTTGTCCTCCAGGTTGTCCCAAAGCTTGTATGGCTCGATGGCCAGAAGAAACTTGGGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003008 GO:0003674 GO:0003824 GO:0004659 GO:0004661 GO:0004663 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0005968 GO:0006464 GO:0006807 GO:0007600 GO:0007601 GO:0008150 GO:0008152 GO:0008318 GO:0009987 GO:0010035 GO:0010038 GO:0010941 GO:0016020 GO:0016740 GO:0016765 GO:0017016 GO:0017137 GO:0018342 GO:0018344 GO:0019538 GO:0019899 GO:0031267 GO:0031974 GO:0031981 GO:0032501 GO:0032991 GO:0036211 GO:0042221 GO:0042981 GO:0043067 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043687 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050789 GO:0050794 GO:0050877 GO:0050896 GO:0050953 GO:0051020 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097354 GO:0140096 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_4 LRR_6 PPTA

Protein Analysis

678

Amino Acids

76.91

Weight (kDa)

5.59

Isoelectric Point (pI)

44.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPTA	PF01239	42 - 69	7.2e-06	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	87 - 117	5.8e-09	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	124 - 151	3e-06	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	158 - 187	3.3e-08	Protein prenyltransferase alpha subunit repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007155)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24490 AT4G24490 AT5G41820 AT5G41820
fragaria_vesca	FvH4_5g35190 FvH4_5g35190 FvH4_5g35190 FvH4_5g35190
malus_domestica	MD08G1200000.v1.1 MD15G1387100.v1.1
prunus_persica	Prupe.1G533400_v2.0.a1 Prupe.1G572600_v2.0.a1
pyrus_communis	pycom08g17340 pycom15g34720
rosa_chinensis	RchiOBHm_Chr7g0236311
rosa_laevigata	RLG00000001088
rosa_multiflora	Rmu_sc0005716.1_g000009 Rmu_sc0006268.1_g000006
rosa_roxburghii	Rroxscaffold_3G00225260
rosa_rugosa	Rorug07G0295400
rosa_samantha	Rh7AG450600 Rh7BG422100 Rh7CG470300 Rh7DG439600
rosa_wichuraiana	Rw7G037450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	429
AccB7I	CCANNNNNTGG	1 cut(s)	403
AccBSI	CCGCTC	1 cut(s)	1822
AccI	GTMKAC	3 cut(s)	488, 1282, 1546
AccIII	TCCGGA	2 cut(s)	166, 1701
AciI	CCGC	2 cut(s)	180, 1820
AclWI	GGATC	4 cut(s)	219, 230, 992, 1218
AcoI	YGGCCR	1 cut(s)	2014
AcsI	RAATTY	7 cut(s)	114, 301, 392, 415, 946, 1192, 1964
AcuI	CTGAAG	3 cut(s)	33, 1376, 1665
AcyI	GRCGYC	1 cut(s)	1243
AdeI	CACNNNGTG	2 cut(s)	1477, 1789
AfaI	GTAC	5 cut(s)	176, 549, 627, 1439, 1886
AfeI	AGCGCT	1 cut(s)	1716
AfiI	CCNNNNNNNGG	5 cut(s)	403, 743, 925, 966, 1212
AflIII	ACRYGT	1 cut(s)	1732
AgsI	TTSAA	7 cut(s)	307, 750, 1072, 1192, 1271, 1485, 1918
AjnI	CCWGG	3 cut(s)	1039, 1867, 1983
AjuI	GAANNNNNNNTTGG	4 cut(s)	7, 39, 1856, 1888
Alw21I	GWGCWC	1 cut(s)	1455
Alw26I	GTCTC	3 cut(s)	90, 373, 704
AlwI	GGATC	4 cut(s)	219, 230, 992, 1218
AlwNI	CAGNNNCTG	1 cut(s)	403
Aor13HI	TCCGGA	2 cut(s)	166, 1701
Aor51HI	AGCGCT	1 cut(s)	1716
AoxI	GGCC	3 cut(s)	734, 916, 2014
ApeKI	GCWGC	3 cut(s)	44, 53, 1741
ApoI	RAATTY	7 cut(s)	114, 301, 392, 415, 946, 1192, 1964
Asp700I	GAANNNNTTC	3 cut(s)	933, 1048, 1389
AspLEI	GCGC	3 cut(s)	254, 1417, 1717
AspS9I	GGNCC	1 cut(s)	916
AsuHPI	GGTGA	3 cut(s)	1195, 1489, 1809
AxyI	CCTNAGG	1 cut(s)	609
BaeI	ACNNNNGTAYC	2 cut(s)	1795, 1828
BalI	TGGCCA	1 cut(s)	2016
BauI	CACGAG	1 cut(s)	1335
Bbv12I	GWGCWC	1 cut(s)	1455
BbvI	GCAGC	3 cut(s)	40, 56, 1753
BccI	CCATC	6 cut(s)	575, 1148, 1222, 1324, 1405, 2006
BceAI	ACGGC	1 cut(s)	1565
BciT130I	CCWGG	3 cut(s)	1041, 1869, 1985
BclI	TGATCA	1 cut(s)	501
BcoDI	GTCTC	3 cut(s)	90, 373, 704
BfaI	CTAG	2 cut(s)	155, 1800
BfmI	CTRYAG	1 cut(s)	1254
BfoI	RGCGCY	2 cut(s)	1418, 1718
BfuAI	ACCTGC	1 cut(s)	429
BisI	GCNGC	3 cut(s)	45, 54, 1742
BlsI	GCNGC	3 cut(s)	46, 55, 1743
BmcAI	AGTACT	2 cut(s)	1439, 1886
Bme1390I	CCNGG	3 cut(s)	1041, 1869, 1985
BmgT120I	GGNCC	1 cut(s)	916
BmiI	GGNNCC	2 cut(s)	648, 930
BmrFI	CCNGG	3 cut(s)	1041, 1869, 1985
BmrI	ACTGGG	1 cut(s)	1897
BmsI	GCATC	4 cut(s)	334, 1162, 1348, 1882
BmuI	ACTGGG	1 cut(s)	1897
BoxI	GACNNNNGTC	1 cut(s)	1620
BpmI	CTGGAG	4 cut(s)	65, 786, 1023, 1967
BpuEI	CTTGAG	2 cut(s)	799, 1113
BsaBI	GATNNNNATC	1 cut(s)	1917
BsaHI	GRCGYC	1 cut(s)	1243
BsaJI	CCNNGG	2 cut(s)	14, 1206
BsaWI	WCCGGW	3 cut(s)	166, 192, 1701
Bsc4I	CCNNNNNNNGG	5 cut(s)	403, 743, 925, 966, 1212
Bse1I	ACTGG	3 cut(s)	82, 1435, 1892
Bse21I	CCTNAGG	1 cut(s)	609
Bse3DI	GCAATG	1 cut(s)	1665
Bse8I	GATNNNNATC	1 cut(s)	1917
BseAI	TCCGGA	2 cut(s)	166, 1701
BseBI	CCWGG	3 cut(s)	1041, 1869, 1985
BseDI	CCNNGG	2 cut(s)	14, 1206
BseGI	GGATG	9 cut(s)	359, 481, 1159, 1177, 1360, 1453, 1762, 1852, 1897
BseJI	GATNNNNATC	1 cut(s)	1917
BseLI	CCNNNNNNNGG	5 cut(s)	403, 743, 925, 966, 1212
BseMI	GCAATG	1 cut(s)	1665
BseMII	CTCAG	9 cut(s)	101, 286, 600, 807, 965, 1215, 1254, 1676, 1800
BseNI	ACTGG	3 cut(s)	82, 1435, 1892
BseRI	GAGGAG	1 cut(s)	705
BseXI	GCAGC	3 cut(s)	40, 56, 1753
BseYI	CCCAGC	1 cut(s)	770
Bsh1285I	CGRYCG	1 cut(s)	10
BshFI	GGCC	3 cut(s)	736, 918, 2016
BsiEI	CGRYCG	1 cut(s)	10
BsiHKAI	GWGCWC	1 cut(s)	1455
BsiSI	CCGG	3 cut(s)	167, 193, 1702
BslFI	GGGAC	1 cut(s)	1976
BslI	CCNNNNNNNGG	5 cut(s)	403, 743, 925, 966, 1212
BsmAI	GTCTC	3 cut(s)	90, 373, 704
BsmFI	GGGAC	1 cut(s)	1976
BsmI	GAATGC	2 cut(s)	25, 355
BsnI	GGCC	3 cut(s)	736, 918, 2016
Bsp1286I	GDGCHC	1 cut(s)	1455
Bsp13I	TCCGGA	2 cut(s)	166, 1701
Bsp1407I	TGTACA	1 cut(s)	625
Bsp143I	GATC	7 cut(s)	211, 235, 464, 501, 997, 1020, 1210
BspACI	CCGC	2 cut(s)	180, 1820
BspANI	GGCC	3 cut(s)	736, 918, 2016
BspCNI	CTCAG	9 cut(s)	100, 285, 601, 808, 964, 1216, 1255, 1677, 1799
BspEI	TCCGGA	2 cut(s)	166, 1701
BspHI	TCATGA	1 cut(s)	1108
BspLI	GGNNCC	2 cut(s)	648, 930
BspMI	ACCTGC	1 cut(s)	429
BspPI	GGATC	4 cut(s)	219, 230, 992, 1218
BspQI	GCTCTTC	1 cut(s)	793
BsrBI	CCGCTC	1 cut(s)	1822
BsrDI	GCAATG	1 cut(s)	1665
BsrGI	TGTACA	1 cut(s)	625
BsrI	ACTGG	3 cut(s)	82, 1435, 1892
BssECI	CCNNGG	2 cut(s)	14, 1206
BssMI	GATC	7 cut(s)	211, 235, 464, 501, 997, 1020, 1210
BssNAI	GTATAC	2 cut(s)	489, 1283
BssNI	GRCGYC	1 cut(s)	1243
BssSI	CACGAG	1 cut(s)	1335
BssT1I	CCWWGG	2 cut(s)	14, 1206
Bst1107I	GTATAC	2 cut(s)	489, 1283
Bst2BI	CACGAG	1 cut(s)	1335
Bst2UI	CCWGG	3 cut(s)	1041, 1869, 1985
Bst4CI	ACNGT	4 cut(s)	8, 883, 1117, 1929
Bst6I	CTCTTC	3 cut(s)	30, 723, 793
BstACI	GRCGYC	1 cut(s)	1243
BstAPI	GCANNNNNTGC	1 cut(s)	575
BstAUI	TGTACA	1 cut(s)	625
BstC8I	GCNNGC	2 cut(s)	201, 1781
BstF5I	GGATG	9 cut(s)	359, 481, 1159, 1177, 1360, 1453, 1762, 1852, 1897
BstH2I	RGCGCY	2 cut(s)	1418, 1718
BstHHI	GCGC	3 cut(s)	254, 1417, 1717
BstKTI	GATC	7 cut(s)	214, 238, 467, 504, 1000, 1023, 1213
BstMAI	GTCTC	3 cut(s)	90, 373, 704
BstMBI	GATC	7 cut(s)	211, 235, 464, 501, 997, 1020, 1210
BstMCI	CGRYCG	1 cut(s)	10
BstMWI	GCNNNNNNNGC	8 cut(s)	50, 53, 59, 179, 575, 783, 1340, 2005
BstNI	CCWGG	3 cut(s)	1041, 1869, 1985
BstNSI	RCATGY	1 cut(s)	1736
BstPAI	GACNNNNGTC	1 cut(s)	1620
BstSCI	CCNGG	3 cut(s)	1039, 1867, 1983
BstSFI	CTRYAG	1 cut(s)	1254
BstV1I	GCAGC	3 cut(s)	40, 56, 1753
BstX2I	RGATCY	1 cut(s)	997
BstXI	CCANNNNNNTGG	1 cut(s)	860
BstYI	RGATCY	1 cut(s)	997
BstZ17I	GTATAC	2 cut(s)	489, 1283
Bsu36I	CCTNAGG	1 cut(s)	609
BsuRI	GGCC	3 cut(s)	736, 918, 2016
BtsCI	GGATG	9 cut(s)	359, 481, 1159, 1177, 1360, 1453, 1762, 1852, 1897
BtsI	GCAGTG	1 cut(s)	1495
BtsIMutI	CAGTG	4 cut(s)	833, 1495, 1641, 1794
BveI	ACCTGC	1 cut(s)	429
Cac8I	GCNNGC	2 cut(s)	201, 1781
CaiI	CAGNNNCTG	1 cut(s)	403
CciI	TCATGA	1 cut(s)	1108
CfoI	GCGC	3 cut(s)	254, 1417, 1717
Cfr13I	GGNCC	1 cut(s)	916
CseI	GACGC	1 cut(s)	1232
Csp6I	GTAC	5 cut(s)	175, 548, 626, 1438, 1885
CviAII	CATG	9 cut(s)	183, 422, 531, 732, 743, 1103, 1109, 1146, 1733
CviQI	GTAC	5 cut(s)	175, 548, 626, 1438, 1885
DpnI	GATC	7 cut(s)	213, 237, 466, 503, 999, 1022, 1212
DpnII	GATC	7 cut(s)	211, 235, 464, 501, 997, 1020, 1210
DraI	TTTAAA	1 cut(s)	1237
DraIII	CACNNNGTG	2 cut(s)	1477, 1789
EaeI	YGGCCR	1 cut(s)	2014
Eam1104I	CTCTTC	3 cut(s)	30, 723, 793
EarI	CTCTTC	3 cut(s)	30, 723, 793
Eco130I	CCWWGG	2 cut(s)	14, 1206
Eco47III	AGCGCT	1 cut(s)	1716
Eco57I	CTGAAG	3 cut(s)	33, 1376, 1665
Eco81I	CCTNAGG	1 cut(s)	609
EcoO109I	RGGNCCY	1 cut(s)	916
EcoRI	GAATTC	2 cut(s)	1192, 1964
EcoRII	CCWGG	3 cut(s)	1039, 1867, 1983
EcoT14I	CCWWGG	2 cut(s)	14, 1206
ErhI	CCWWGG	2 cut(s)	14, 1206
FaeI	CATG	9 cut(s)	186, 425, 534, 735, 746, 1106, 1112, 1149, 1736
FalI	AAGNNNNNCTT	4 cut(s)	7, 39, 1374, 1406
FaqI	GGGAC	1 cut(s)	1976
FatI	CATG	9 cut(s)	182, 421, 530, 731, 742, 1102, 1108, 1145, 1732
FbaI	TGATCA	1 cut(s)	501
FblI	GTMKAC	3 cut(s)	488, 1282, 1546
Fnu4HI	GCNGC	3 cut(s)	45, 54, 1742
FokI	GGATG	9 cut(s)	346, 488, 1166, 1184, 1367, 1460, 1769, 1859, 1904
Fsp4HI	GCNGC	3 cut(s)	45, 54, 1742
FspBI	CTAG	2 cut(s)	155, 1800
GlaI	GCGC	3 cut(s)	253, 1416, 1716
GluI	GCNGC	3 cut(s)	45, 54, 1742
GsaI	CCCAGC	1 cut(s)	774
GsuI	CTGGAG	4 cut(s)	65, 786, 1023, 1967
HaeII	RGCGCY	2 cut(s)	1418, 1718
HaeIII	GGCC	3 cut(s)	736, 918, 2016
HapII	CCGG	3 cut(s)	167, 193, 1702
HgaI	GACGC	1 cut(s)	1232
HhaI	GCGC	3 cut(s)	254, 1417, 1717
Hin1I	GRCGYC	1 cut(s)	1243
Hin1II	CATG	9 cut(s)	186, 425, 534, 735, 746, 1106, 1112, 1149, 1736
Hin6I	GCGC	3 cut(s)	252, 1415, 1715
HinP1I	GCGC	3 cut(s)	252, 1415, 1715
HincII	GTYRAC	1 cut(s)	1908
HindII	GTYRAC	1 cut(s)	1908
HindIII	AAGCTT	4 cut(s)	149, 197, 1461, 1997
HpaI	GTTAAC	1 cut(s)	1908
HpaII	CCGG	3 cut(s)	167, 193, 1702
HphI	GGTGA	3 cut(s)	1195, 1489, 1809
Hpy166II	GTNNAC	9 cut(s)	177, 489, 548, 801, 1283, 1375, 1547, 1792, 1908
Hpy8I	GTNNAC	9 cut(s)	177, 489, 548, 801, 1283, 1375, 1547, 1792, 1908
Hpy99I	CGWCG	1 cut(s)	1121
HpyAV	CCTTC	4 cut(s)	747, 1127, 1400, 1640
HpyCH4III	ACNGT	4 cut(s)	8, 883, 1117, 1929
HpyCH4V	TGCA	6 cut(s)	4, 484, 530, 1319, 1663, 1955
HpyF10VI	GCNNNNNNNGC	8 cut(s)	50, 53, 59, 179, 575, 783, 1340, 2005
Hsp92I	GRCGYC	1 cut(s)	1243
Hsp92II	CATG	9 cut(s)	186, 425, 534, 735, 746, 1106, 1112, 1149, 1736
HspAI	GCGC	3 cut(s)	252, 1415, 1715
Kpn2I	TCCGGA	2 cut(s)	166, 1701
Ksp22I	TGATCA	1 cut(s)	501
KspAI	GTTAAC	1 cut(s)	1908
Kzo9I	GATC	7 cut(s)	211, 235, 464, 501, 997, 1020, 1210
LguI	GCTCTTC	1 cut(s)	793
LmnI	GCTCC	1 cut(s)	767
Lsp1109I	GCAGC	3 cut(s)	40, 56, 1753
LweI	GCATC	4 cut(s)	334, 1162, 1348, 1882
MaeI	CTAG	2 cut(s)	155, 1800
MaeIII	GTNAC	6 cut(s)	883, 1201, 1477, 1622, 1688, 1876
MalI	GATC	7 cut(s)	213, 237, 466, 503, 999, 1022, 1212
MbiI	CCGCTC	1 cut(s)	1822
MboI	GATC	7 cut(s)	211, 235, 464, 501, 997, 1020, 1210
MfeI	CAATTG	1 cut(s)	888
MflI	RGATCY	1 cut(s)	997
MhlI	GDGCHC	1 cut(s)	1455
MlsI	TGGCCA	1 cut(s)	2016
MluNI	TGGCCA	1 cut(s)	2016
MlyI	GAGTC	4 cut(s)	706, 827, 1696, 1715
MmeI	TCCRAC	1 cut(s)	1734
Mox20I	TGGCCA	1 cut(s)	2016
MroI	TCCGGA	2 cut(s)	166, 1701
MroXI	GAANNNNTTC	3 cut(s)	933, 1048, 1389
MscI	TGGCCA	1 cut(s)	2016
MseI	TTAA	5 cut(s)	140, 702, 1217, 1236, 1907
MslI	CAYNNNNRTG	1 cut(s)	1107
Msp20I	TGGCCA	1 cut(s)	2016
MspA1I	CMGCKG	3 cut(s)	53, 1396, 1744
MspI	CCGG	3 cut(s)	167, 193, 1702
MspR9I	CCNGG	3 cut(s)	1041, 1869, 1985
MunI	CAATTG	1 cut(s)	888
Mva1269I	GAATGC	2 cut(s)	25, 355
MvaI	CCWGG	3 cut(s)	1041, 1869, 1985
MwoI	GCNNNNNNNGC	8 cut(s)	50, 53, 59, 179, 575, 783, 1340, 2005
NdeII	GATC	7 cut(s)	211, 235, 464, 501, 997, 1020, 1210
NlaIII	CATG	9 cut(s)	186, 425, 534, 735, 746, 1106, 1112, 1149, 1736
NlaIV	GGNNCC	2 cut(s)	648, 930
NmuCI	GTSAC	4 cut(s)	1201, 1477, 1622, 1688
NspI	RCATGY	1 cut(s)	1736
PagI	TCATGA	1 cut(s)	1108
PciI	ACATGT	1 cut(s)	1732
PciSI	GCTCTTC	1 cut(s)	793
PctI	GAATGC	2 cut(s)	25, 355
PdmI	GAANNNNTTC	3 cut(s)	933, 1048, 1389
PflMI	CCANNNNNTGG	1 cut(s)	403
PfoI	TCCNGGA	2 cut(s)	1039, 1867
PkrI	GCNGC	3 cut(s)	46, 55, 1743
PleI	GAGTC	4 cut(s)	706, 826, 1695, 1715
PpsI	GAGTC	4 cut(s)	706, 826, 1695, 1715
PscI	ACATGT	1 cut(s)	1732
PshAI	GACNNNNGTC	1 cut(s)	1620
Psp6I	CCWGG	3 cut(s)	1039, 1867, 1983
PspFI	CCCAGC	1 cut(s)	770
PspGI	CCWGG	3 cut(s)	1039, 1867, 1983
PspN4I	GGNNCC	2 cut(s)	648, 930
PspPI	GGNCC	1 cut(s)	916
PstNI	CAGNNNCTG	1 cut(s)	403
PsuI	RGATCY	1 cut(s)	997
PvuII	CAGCTG	3 cut(s)	53, 1396, 1744
RsaI	GTAC	5 cut(s)	176, 549, 627, 1439, 1886
RsaNI	GTAC	5 cut(s)	175, 548, 626, 1438, 1885
RseI	CAYNNNNRTG	1 cut(s)	1107
SapI	GCTCTTC	1 cut(s)	793
SaqAI	TTAA	5 cut(s)	140, 702, 1217, 1236, 1907
SatI	GCNGC	3 cut(s)	45, 54, 1742
Sau3AI	GATC	7 cut(s)	211, 235, 464, 501, 997, 1020, 1210
Sau96I	GGNCC	1 cut(s)	916
ScaI	AGTACT	2 cut(s)	1439, 1886
SchI	GAGTC	4 cut(s)	706, 827, 1696, 1715
ScrFI	CCNGG	3 cut(s)	1041, 1869, 1985
SduI	GDGCHC	1 cut(s)	1455
SfaNI	GCATC	4 cut(s)	334, 1162, 1348, 1882
SfcI	CTRYAG	1 cut(s)	1254
SmiMI	CAYNNNNRTG	1 cut(s)	1107
SmlI	CTYRAG	2 cut(s)	778, 1128
SmoI	CTYRAG	2 cut(s)	778, 1128
SsiI	CCGC	2 cut(s)	180, 1820
SspMI	CTAG	2 cut(s)	155, 1800
StyD4I	CCNGG	3 cut(s)	1039, 1867, 1983
StyI	CCWWGG	2 cut(s)	14, 1206
TaaI	ACNGT	4 cut(s)	8, 883, 1117, 1929
TaqI	TCGA	3 cut(s)	331, 1119, 2010
TatI	WGTACW	4 cut(s)	547, 625, 1437, 1884
Tru1I	TTAA	5 cut(s)	140, 702, 1217, 1236, 1907
Tru9I	TTAA	5 cut(s)	140, 702, 1217, 1236, 1907
TscAI	CASTG	4 cut(s)	840, 1495, 1648, 1794
TseFI	GTSAC	4 cut(s)	1201, 1477, 1622, 1688
TseI	GCWGC	3 cut(s)	44, 53, 1741
Tsp45I	GTSAC	4 cut(s)	1201, 1477, 1622, 1688
TspGWI	ACGGA	3 cut(s)	352, 659, 1166
TspRI	CASTG	4 cut(s)	840, 1495, 1648, 1794
Van91I	CCANNNNNTGG	1 cut(s)	403
XapI	RAATTY	7 cut(s)	114, 301, 392, 415, 946, 1192, 1964
XbaI	TCTAGA	1 cut(s)	154
XceI	RCATGY	1 cut(s)	1736
XcmI	CCANNNNNNNNNTGG	4 cut(s)	860, 1648, 2001, 2024
XmiI	GTMKAC	3 cut(s)	488, 1282, 1546
XmnI	GAANNNNTTC	3 cut(s)	933, 1048, 1389
XspI	CTAG	2 cut(s)	155, 1800
ZrmI	AGTACT	2 cut(s)	1439, 1886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.