Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0007155

Physical Location & Seq

Genomic Coordinates Forward (+)

25901127 .. 25905800

Gene Structure 4674 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1200000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGCACGGACGACCTCGCAAGCCCGCGAAGCCGGAAGACGAATCGGCTTCTGCCGCCAGAGCCGAAGCGCTCCGAGCTCTCCAGTCGCAATTCTTCTCCAACCACCACAACAAGGTTTACACCGACGAAGCCCTACAGTTGAGCGGCAGACTCATCGAGCAAAACCCCGAGTTTTACACTGCTTGGAACTACAGAAAACTCGTCGTCCAGCAAAACCTCGATCGGTGCTCCGAGTCCGATCCCGACGCGCTCAAGTCCATCATTGACCAAGAACTCAGACTCGTAGAAATTGCTCTGAGACAAAATTTTAAGTCCTACGGAGCTTGGCATCATCGAAAATGGGTGCTAAGCAAGGGGCATTCGGTTTTGGACCGCGAAATGAAGCTTCTCAAACAGTTCCAGCTGCTGGATCCCCGGAATTTTCATGCTTGGAACTACCGCAGATTTGTAGCTGCATTGTTGAACCGATCGGACGAGGAAGAGTTGGAGTATACTAGGGAAATGGTAGAAAACAATTTCAGCAATTACTCGGCCTGGCATAATCGTAGTGTACTCCTGTCTAATTTGATGAAGAAAAAGGCTGAAGGGTTTTTCCCAAAAGCGAAGGTTCTGAACAATGAGTATGAACATGTACACGATGCTATTTTTACGGATCCAGATGATCAAAGTGGTTGGTTTTATTATACTTGGCTTCTTGATCAAACGGTGAAGACAGATGCTCCTCTTCTTGTTTCTTCTTGGCCGGCCCATGGATCTTCCGTAATTTTGTCGAGAAATAGGCACTCAAGTGACTGTTCTTCATCTCCATTTGATAGTTTCCGTTCTGATTCCGGAACAGTGCCACTGCTTATTTATTTCAATCAAGCAGTTGAAGGTGTAAATTCATCCAGTATAACCATTGAATCTTCATTTTGCACAAAAGATCTTATTTGGAAACCAGTCTTACAAAATAACTCCCAGCTCTCTCAAGTTTGGGTTACTCATATTAAATTTCCAAATGCAAAGTCTCATTCTTCAGAAGTGTATCAGCTGAAAGTTAGTGTTGGGCCGACTCAGGGTATCATTTCTGCAAGTGGCTTTGATTATAGTCATCCTACACAGTTTGCATTCAAAGTGTGTGTACGCCCTATTGAAACTGAACCAGCTGAAAAGCAGGGCGAGGACATAATTTTATGGACAGATGAAAATTTTCATGCGTTCCAAACACAATATCAGGAGCTACATGAAGTAGTTCCTGTTGATCAACAAAGTGTTAATGATGTACATGAGCCAACGGCTTCAAATTGGCGTGCAGAGACTATTGCTAAGGAAATAGCTCTCTTCCGAGAATTGGTGTCAGAGATAAATTGTAAAATTGGAAAGCTTACACTAGCAAGGCTATTAACAGCTCATGATGTTATCTTGTCTCCATGTACAAGCAAAATGTTCCACTCTGACGAAGTTCTTCAACTATATATCGACTTAATAAAGTTGGACCCATCACATTCTCAGTATTACAAAGATGAGCACAGCTTAGTATTCCTGCAGAAGGTAACTTCCAATAGGGAGTCTCTGCTCAGGCATTGCTTTAGCCATAAAAACTTGGCTTCTTCGAGCATTGGTAATCATATATGCCTACGACTAAACAACTTATCATTATCGCGGATGGGGTCTGTTGAGAAATTACTGTGGGTCCGAATGCTGGACCTCAGCCATAATGAACTTCATTCAATTGAAGGATTGGAGGCCATGCAGCTTCTATCTCGCTTAAATCTGAGTAACAACAAGCTCGGCAGTTTTACTGCTCTGGGTCCTTTGAAACAGTTGAAGTTACTGCAAGTGTTGGATATCTCATACAATGAGATAGGTGCACACTCTATTGACACAACACGGTATCAATGTTCTACTCCTCTTTCTCATACAGAGGAAGCTAGTTGGAACAGTGAAGAAATTGGGACTGGGGGTGCCGGTGTGAAAGGTTATTGGGAAGCTTTTCTGATATTTAAAAGCATGAGCTTGACGCAGTTAGTCACTCTAGGAAATGCAATTTCTGGCGAAAACTTCAAGTCATTTGTGGTCATGTTTGTTCCTACACTCGAGTGGCTGGATGGCGATAAGTTGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003008 GO:0003674 GO:0003824 GO:0004659 GO:0004661 GO:0004663 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0005968 GO:0006464 GO:0006807 GO:0007600 GO:0007601 GO:0008150 GO:0008152 GO:0008318 GO:0009987 GO:0010035 GO:0010038 GO:0010941 GO:0016020 GO:0016740 GO:0016765 GO:0017016 GO:0017137 GO:0018342 GO:0018344 GO:0019538 GO:0019899 GO:0031267 GO:0031974 GO:0031981 GO:0032501 GO:0032991 GO:0036211 GO:0042221 GO:0042981 GO:0043067 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043687 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050789 GO:0050794 GO:0050877 GO:0050896 GO:0050953 GO:0051020 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097354 GO:0140096 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_4 LRR_6 PPTA

Protein Analysis

702

Amino Acids

80.02

Weight (kDa)

6.16

Isoelectric Point (pI)

40.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPTA	PF01239	42 - 71	6.6e-07	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	89 - 118	1.3e-08	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	123 - 151	1.2e-06	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	159 - 189	3.4e-08	Protein prenyltransferase alpha subunit repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007155)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24490 AT4G24490 AT5G41820 AT5G41820
fragaria_vesca	FvH4_5g35190 FvH4_5g35190 FvH4_5g35190 FvH4_5g35190
malus_domestica	MD08G1200000.v1.1 MD15G1387100.v1.1
prunus_persica	Prupe.1G533400_v2.0.a1 Prupe.1G572600_v2.0.a1
pyrus_communis	pycom08g17340 pycom15g34720
rosa_chinensis	RchiOBHm_Chr7g0236311
rosa_laevigata	RLG00000001088
rosa_multiflora	Rmu_sc0005716.1_g000009 Rmu_sc0006268.1_g000006
rosa_roxburghii	Rroxscaffold_3G00225260
rosa_rugosa	Rorug07G0295400
rosa_samantha	Rh7AG450600 Rh7BG422100 Rh7CG470300 Rh7DG439600
rosa_wichuraiana	Rw7G037450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1943
AccB7I	CCANNNNNTGG	1 cut(s)	406
AccBSI	CCGCTC	1 cut(s)	144
AccI	GTMKAC	1 cut(s)	491
AccII	CGCG	4 cut(s)	26, 248, 375, 1642
AccIII	TCCGGA	1 cut(s)	830
AciI	CCGC	6 cut(s)	24, 54, 144, 373, 439, 1642
AclWI	GGATC	6 cut(s)	233, 404, 417, 647, 660, 760
AcoI	YGGCCR	1 cut(s)	740
AcsI	RAATTY	5 cut(s)	304, 418, 880, 989, 1186
AcuI	CTGAAG	2 cut(s)	603, 999
AfaI	GTAC	5 cut(s)	552, 633, 1122, 1263, 1414
AfeI	AGCGCT	1 cut(s)	69
AfiI	CCNNNNNNNGG	7 cut(s)	112, 406, 749, 1055, 1330, 1528, 1681
AflIII	ACRYGT	1 cut(s)	628
AjnI	CCWGG	1 cut(s)	533
AleI	CACNNNNGTG	2 cut(s)	786, 2077
Alw21I	GWGCWC	4 cut(s)	79, 230, 1509, 1852
Alw26I	GTCTC	5 cut(s)	292, 1011, 1289, 1410, 1554
Alw44I	GTGCAC	1 cut(s)	1848
AlwI	GGATC	6 cut(s)	233, 404, 417, 647, 660, 760
AlwNI	CAGNNNCTG	1 cut(s)	406
Ama87I	CYCGRG	2 cut(s)	167, 2075
Aor13HI	TCCGGA	1 cut(s)	830
Aor51HI	AGCGCT	1 cut(s)	69
AoxI	GGCC	5 cut(s)	531, 740, 744, 1046, 1725
ApaLI	GTGCAC	1 cut(s)	1848
ApeKI	GCWGC	3 cut(s)	403, 452, 1732
ApoI	RAATTY	5 cut(s)	304, 418, 880, 989, 1186
ArsI	GACNNNNNNTTYG	2 cut(s)	989, 1021
Asp700I	GAANNNNTTC	4 cut(s)	1188, 1230, 1443, 1971
AspLEI	GCGC	2 cut(s)	70, 250
AspS9I	GGNCC	7 cut(s)	370, 745, 1046, 1474, 1672, 1684, 1790
AsuC2I	CCSGG	1 cut(s)	415
AsuHPI	GGTGA	1 cut(s)	718
AvaI	CYCGRG	2 cut(s)	167, 2075
AvaII	GGWCC	5 cut(s)	370, 1474, 1672, 1684, 1790
BaeGI	GKGCMC	1 cut(s)	1852
BamHI	GGATCC	2 cut(s)	409, 652
BanI	GGYRCC	1 cut(s)	1943
BanII	GRGCYC	1 cut(s)	79
BbsI	GAAGAC	2 cut(s)	42, 716
Bbv12I	GWGCWC	4 cut(s)	79, 230, 1509, 1852
BbvCI	CCTCAGC	1 cut(s)	1688
BbvI	GCAGC	3 cut(s)	390, 439, 1744
BccI	CCATC	4 cut(s)	266, 1486, 1639, 2081
BceAI	ACGGC	1 cut(s)	1290
BcgI	CGANNNNNNTGC	2 cut(s)	136, 170
BciT130I	CCWGG	1 cut(s)	535
BclI	TGATCA	3 cut(s)	661, 697, 1240
BcnI	CCSGG	1 cut(s)	415
BcoDI	GTCTC	5 cut(s)	292, 1011, 1289, 1410, 1554
BfaI	CTAG	4 cut(s)	495, 1370, 1911, 2015
BfmI	CTRYAG	3 cut(s)	134, 190, 1523
BfoI	RGCGCY	1 cut(s)	71
BglII	AGATCT	1 cut(s)	922
BisI	GCNGC	5 cut(s)	54, 145, 404, 453, 1733
BlpI	GCTNAGC	1 cut(s)	347
BlsI	GCNGC	5 cut(s)	55, 146, 405, 454, 1734
Bme1390I	CCNGG	2 cut(s)	415, 535
Bme18I	GGWCC	5 cut(s)	370, 1474, 1672, 1684, 1790
BmeT110I	CYCGRG	2 cut(s)	167, 2075
BmgT120I	GGNCC	7 cut(s)	370, 745, 1046, 1474, 1672, 1684, 1790
BmiI	GGNNCC	6 cut(s)	411, 654, 1476, 1673, 1791, 1945
BmrFI	CCNGG	2 cut(s)	415, 535
BmrI	ACTGGG	1 cut(s)	1947
BmsI	GCATC	3 cut(s)	337, 628, 706
BmuI	ACTGGG	1 cut(s)	1947
BpiI	GAAGAC	2 cut(s)	42, 716
BpmI	CTGGAG	1 cut(s)	65
Bpu10I	CCTNAGC	3 cut(s)	1305, 1556, 1688
Bpu1102I	GCTNAGC	1 cut(s)	347
BpuEI	CTTGAG	3 cut(s)	236, 769, 951
BpuMI	CCSGG	1 cut(s)	415
BsaJI	CCNNGG	2 cut(s)	413, 748
BsaWI	WCCGGW	1 cut(s)	830
BsaXI	ACNNNNNCTCC	2 cut(s)	703, 733
Bsc4I	CCNNNNNNNGG	7 cut(s)	112, 406, 749, 1055, 1330, 1528, 1681
Bse118I	RCCGGY	2 cut(s)	742, 1946
Bse1I	ACTGG	4 cut(s)	82, 888, 938, 1942
Bse3DI	GCAATG	1 cut(s)	1561
BseAI	TCCGGA	1 cut(s)	830
BseBI	CCWGG	1 cut(s)	535
BseDI	CCNNGG	2 cut(s)	413, 748
BseGI	GGATG	4 cut(s)	884, 1090, 1650, 2092
BseLI	CCNNNNNNNGG	7 cut(s)	112, 406, 749, 1055, 1330, 1528, 1681
BseMI	GCAATG	1 cut(s)	1561
BseMII	CTCAG	7 cut(s)	287, 289, 1067, 1502, 1570, 1702, 1745
BseNI	ACTGG	4 cut(s)	82, 888, 938, 1942
BseRI	GAGGAG	2 cut(s)	711, 1878
BseSI	GKGCMC	1 cut(s)	1852
BseXI	GCAGC	3 cut(s)	390, 439, 1744
BseYI	CCCAGC	1 cut(s)	957
BsgI	GTGCAG	1 cut(s)	1311
Bsh1236I	CGCG	4 cut(s)	26, 248, 375, 1642
Bsh1285I	CGRYCG	2 cut(s)	223, 470
BshFI	GGCC	5 cut(s)	533, 742, 746, 1048, 1727
BshNI	GGYRCC	1 cut(s)	1943
BsiEI	CGRYCG	2 cut(s)	223, 470
BsiHKAI	GWGCWC	4 cut(s)	79, 230, 1509, 1852
BsiHKCI	CYCGRG	2 cut(s)	167, 2075
BsiSI	CCGG	5 cut(s)	32, 415, 743, 831, 1947
BslFI	GGGAC	1 cut(s)	1948
BslI	CCNNNNNNNGG	7 cut(s)	112, 406, 749, 1055, 1330, 1528, 1681
BsmAI	GTCTC	5 cut(s)	292, 1011, 1289, 1410, 1554
BsmFI	GGGAC	1 cut(s)	1948
BsmI	GAATGC	3 cut(s)	358, 1106, 1683
BsnI	GGCC	5 cut(s)	533, 742, 746, 1048, 1727
BsoBI	CYCGRG	2 cut(s)	167, 2075
Bsp1286I	GDGCHC	4 cut(s)	79, 230, 1509, 1852
Bsp13I	TCCGGA	1 cut(s)	830
Bsp1407I	TGTACA	3 cut(s)	631, 1261, 1412
Bsp1720I	GCTNAGC	1 cut(s)	347
Bsp19I	CCATGG	1 cut(s)	748
BspACI	CCGC	6 cut(s)	24, 54, 144, 373, 439, 1642
BspANI	GGCC	5 cut(s)	533, 742, 746, 1048, 1727
BspCNI	CTCAG	7 cut(s)	288, 288, 1066, 1501, 1569, 1701, 1746
BspEI	TCCGGA	1 cut(s)	830
BspFNI	CGCG	4 cut(s)	26, 248, 375, 1642
BspHI	TCATGA	1 cut(s)	1390
BspLI	GGNNCC	6 cut(s)	411, 654, 1476, 1673, 1791, 1945
BspMAI	CTGCAG	1 cut(s)	1527
BspPI	GGATC	6 cut(s)	233, 404, 417, 647, 660, 760
BspT107I	GGYRCC	1 cut(s)	1943
BsrBI	CCGCTC	1 cut(s)	144
BsrDI	GCAATG	1 cut(s)	1561
BsrFI	RCCGGY	2 cut(s)	742, 1946
BsrGI	TGTACA	3 cut(s)	631, 1261, 1412
BsrI	ACTGG	4 cut(s)	82, 888, 938, 1942
BssAI	RCCGGY	2 cut(s)	742, 1946
BssECI	CCNNGG	2 cut(s)	413, 748
BssNAI	GTATAC	1 cut(s)	492
BssT1I	CCWWGG	1 cut(s)	748
Bst1107I	GTATAC	1 cut(s)	492
Bst2UI	CCWGG	1 cut(s)	535
Bst6I	CTCTTC	3 cut(s)	474, 729, 1325
BstAUI	TGTACA	3 cut(s)	631, 1261, 1412
BstC8I	GCNNGC	4 cut(s)	20, 24, 744, 1290
BstDSI	CCRYGG	1 cut(s)	748
BstENI	CCTNNNNNAGG	1 cut(s)	1526
BstF5I	GGATG	4 cut(s)	884, 1090, 1650, 2092
BstFNI	CGCG	4 cut(s)	26, 248, 375, 1642
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	70, 250
BstMAI	GTCTC	5 cut(s)	292, 1011, 1289, 1410, 1554
BstMCI	CGRYCG	2 cut(s)	223, 470
BstMWI	GCNNNNNNNGC	4 cut(s)	28, 53, 59, 74
BstNI	CCWGG	1 cut(s)	535
BstNSI	RCATGY	1 cut(s)	632
BstSCI	CCNGG	2 cut(s)	413, 533
BstSFI	CTRYAG	3 cut(s)	134, 190, 1523
BstSLI	GKGCMC	1 cut(s)	1852
BstUI	CGCG	4 cut(s)	26, 248, 375, 1642
BstV1I	GCAGC	3 cut(s)	390, 439, 1744
BstV2I	GAAGAC	2 cut(s)	42, 716
BstX2I	RGATCY	4 cut(s)	409, 652, 752, 922
BstYI	RGATCY	4 cut(s)	409, 652, 752, 922
BstZ17I	GTATAC	1 cut(s)	492
BsuRI	GGCC	5 cut(s)	533, 742, 746, 1048, 1727
BtgI	CCRYGG	1 cut(s)	748
BtsCI	GGATG	4 cut(s)	884, 1090, 1650, 2092
BtsI	GCAGTG	2 cut(s)	177, 842
BtsIMutI	CAGTG	4 cut(s)	177, 842, 843, 1927
Cac8I	GCNNGC	4 cut(s)	20, 24, 744, 1290
CaiI	CAGNNNCTG	1 cut(s)	406
CciI	TCATGA	1 cut(s)	1390
CfoI	GCGC	2 cut(s)	70, 250
Cfr10I	RCCGGY	2 cut(s)	742, 1946
Cfr13I	GGNCC	7 cut(s)	370, 745, 1046, 1474, 1672, 1684, 1790
CseI	GACGC	2 cut(s)	254, 2008
Csp6I	GTAC	5 cut(s)	551, 632, 1121, 1262, 1413
CviQI	GTAC	5 cut(s)	551, 632, 1121, 1262, 1413
DraI	TTTAAA	1 cut(s)	1984
EaeI	YGGCCR	1 cut(s)	740
Eam1104I	CTCTTC	3 cut(s)	474, 729, 1325
EarI	CTCTTC	3 cut(s)	474, 729, 1325
Ecl136II	GAGCTC	1 cut(s)	77
Eco130I	CCWWGG	1 cut(s)	748
Eco24I	GRGCYC	1 cut(s)	79
Eco32I	GATATC	1 cut(s)	1828
Eco47I	GGWCC	5 cut(s)	370, 1474, 1672, 1684, 1790
Eco47III	AGCGCT	1 cut(s)	69
Eco53kI	GAGCTC	1 cut(s)	77
Eco57I	CTGAAG	2 cut(s)	603, 999
Eco88I	CYCGRG	2 cut(s)	167, 2075
EcoICRI	GAGCTC	1 cut(s)	77
EcoNI	CCTNNNNNAGG	1 cut(s)	1526
EcoO109I	RGGNCCY	1 cut(s)	1790
EcoRII	CCWGG	1 cut(s)	533
EcoRV	GATATC	1 cut(s)	1828
EcoT14I	CCWWGG	1 cut(s)	748
EcoT38I	GRGCYC	1 cut(s)	79
ErhI	CCWWGG	1 cut(s)	748
FaqI	GGGAC	1 cut(s)	1948
FauI	CCCGC	1 cut(s)	31
FbaI	TGATCA	3 cut(s)	661, 697, 1240
FblI	GTMKAC	1 cut(s)	491
Fnu4HI	GCNGC	5 cut(s)	54, 145, 404, 453, 1733
FokI	GGATG	4 cut(s)	871, 1077, 1657, 2099
FriOI	GRGCYC	1 cut(s)	79
FseI	GGCCGGCC	1 cut(s)	746
Fsp4HI	GCNGC	5 cut(s)	54, 145, 404, 453, 1733
FspBI	CTAG	4 cut(s)	495, 1370, 1911, 2015
GlaI	GCGC	2 cut(s)	69, 249
GluI	GCNGC	5 cut(s)	54, 145, 404, 453, 1733
GsaI	CCCAGC	1 cut(s)	961
GsuI	CTGGAG	1 cut(s)	65
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	5 cut(s)	533, 742, 746, 1048, 1727
HapII	CCGG	5 cut(s)	32, 415, 743, 831, 1947
HgaI	GACGC	2 cut(s)	254, 2008
HhaI	GCGC	2 cut(s)	70, 250
Hin6I	GCGC	2 cut(s)	68, 248
HinP1I	GCGC	2 cut(s)	68, 248
HindIII	AAGCTT	3 cut(s)	383, 1361, 1968
HinfI	GANTC	8 cut(s)	41, 150, 233, 279, 827, 902, 1051, 1547
HpaII	CCGG	5 cut(s)	32, 415, 743, 831, 1947
HphI	GGTGA	1 cut(s)	718
Hpy166II	GTNNAC	6 cut(s)	118, 492, 551, 634, 1121, 1850
Hpy188III	TCNNGA	7 cut(s)	242, 656, 695, 771, 831, 1214, 1391
Hpy8I	GTNNAC	6 cut(s)	118, 492, 551, 634, 1121, 1850
Hpy99I	CGWCG	3 cut(s)	128, 206, 248
HpyAV	CCTTC	5 cut(s)	578, 598, 866, 1522, 1709
HpyF10VI	GCNNNNNNNGC	4 cut(s)	28, 53, 59, 74
HspAI	GCGC	2 cut(s)	68, 248
Kpn2I	TCCGGA	1 cut(s)	830
KroI	GCCGGC	1 cut(s)	742
KroNI	GCCGGC	1 cut(s)	744
Ksp22I	TGATCA	3 cut(s)	661, 697, 1240
LmnI	GCTCC	5 cut(s)	75, 233, 320, 724, 1216
Lsp1109I	GCAGC	3 cut(s)	390, 439, 1744
LweI	GCATC	3 cut(s)	337, 628, 706
MaeI	CTAG	4 cut(s)	495, 1370, 1911, 2015
MaeIII	GTNAC	6 cut(s)	788, 976, 1531, 1757, 1809, 2008
MbiI	CCGCTC	1 cut(s)	144
MfeI	CAATTG	1 cut(s)	1710
MflI	RGATCY	4 cut(s)	409, 652, 752, 922
MhlI	GDGCHC	4 cut(s)	79, 230, 1509, 1852
MlyI	GAGTC	5 cut(s)	144, 242, 273, 1045, 1556
MmeI	TCCRAC	5 cut(s)	123, 465, 1452, 1803, 1895
MnlI	CCTC	9 cut(s)	24, 227, 469, 732, 1153, 1697, 1717, 1897, 1899
MroI	TCCGGA	1 cut(s)	830
MroNI	GCCGGC	1 cut(s)	742
MroXI	GAANNNNTTC	4 cut(s)	1188, 1230, 1443, 1971
MseI	TTAA	7 cut(s)	309, 987, 1254, 1382, 1463, 1748, 1983
MslI	CAYNNNNRTG	2 cut(s)	786, 2077
MspA1I	CMGCKG	3 cut(s)	403, 1030, 1145
MspI	CCGG	5 cut(s)	32, 415, 743, 831, 1947
MspR9I	CCNGG	2 cut(s)	415, 535
MunI	CAATTG	1 cut(s)	1710
Mva1269I	GAATGC	3 cut(s)	358, 1106, 1683
MvaI	CCWGG	1 cut(s)	535
MvnI	CGCG	4 cut(s)	26, 248, 375, 1642
MwoI	GCNNNNNNNGC	4 cut(s)	28, 53, 59, 74
NaeI	GCCGGC	1 cut(s)	744
NciI	CCSGG	1 cut(s)	415
NcoI	CCATGG	1 cut(s)	748
NgoMIV	GCCGGC	1 cut(s)	742
NlaIV	GGNNCC	6 cut(s)	411, 654, 1476, 1673, 1791, 1945
NmeAIII	GCCGAG	2 cut(s)	509, 1749
NmuCI	GTSAC	2 cut(s)	788, 2008
NspI	RCATGY	1 cut(s)	632
OliI	CACNNNNGTG	2 cut(s)	786, 2077
PaeR7I	CTCGAG	1 cut(s)	2075
PagI	TCATGA	1 cut(s)	1390
PciI	ACATGT	1 cut(s)	628
PctI	GAATGC	3 cut(s)	358, 1106, 1683
PdiI	GCCGGC	1 cut(s)	744
PdmI	GAANNNNTTC	4 cut(s)	1188, 1230, 1443, 1971
PfeI	GAWTC	3 cut(s)	41, 827, 902
PflMI	CCANNNNNTGG	1 cut(s)	406
PkrI	GCNGC	5 cut(s)	55, 146, 405, 454, 1734
Ple19I	CGATCG	2 cut(s)	223, 470
PleI	GAGTC	5 cut(s)	144, 241, 273, 1045, 1555
PpsI	GAGTC	5 cut(s)	144, 241, 273, 1045, 1555
PpuMI	RGGWCCY	1 cut(s)	1790
PscI	ACATGT	1 cut(s)	628
Psp124BI	GAGCTC	1 cut(s)	79
Psp5II	RGGWCCY	1 cut(s)	1790
Psp6I	CCWGG	1 cut(s)	533
PspFI	CCCAGC	1 cut(s)	957
PspGI	CCWGG	1 cut(s)	533
PspN4I	GGNNCC	6 cut(s)	411, 654, 1476, 1673, 1791, 1945
PspPI	GGNCC	7 cut(s)	370, 745, 1046, 1474, 1672, 1684, 1790
PspPPI	RGGWCCY	1 cut(s)	1790
PspXI	VCTCGAGB	1 cut(s)	2075
PstI	CTGCAG	1 cut(s)	1527
PstNI	CAGNNNCTG	1 cut(s)	406
PsuI	RGATCY	4 cut(s)	409, 652, 752, 922
PvuI	CGATCG	2 cut(s)	223, 470
PvuII	CAGCTG	3 cut(s)	403, 1030, 1145
RigI	GGCCGGCC	1 cut(s)	746
RsaI	GTAC	5 cut(s)	552, 633, 1122, 1263, 1414
RsaNI	GTAC	5 cut(s)	551, 632, 1121, 1262, 1413
RseI	CAYNNNNRTG	2 cut(s)	786, 2077
SacI	GAGCTC	1 cut(s)	79
SaqAI	TTAA	7 cut(s)	309, 987, 1254, 1382, 1463, 1748, 1983
SatI	GCNGC	5 cut(s)	54, 145, 404, 453, 1733
Sau96I	GGNCC	7 cut(s)	370, 745, 1046, 1474, 1672, 1684, 1790
SchI	GAGTC	5 cut(s)	144, 242, 273, 1045, 1556
ScrFI	CCNGG	2 cut(s)	415, 535
SduI	GDGCHC	4 cut(s)	79, 230, 1509, 1852
SfaNI	GCATC	3 cut(s)	337, 628, 706
SfcI	CTRYAG	3 cut(s)	134, 190, 1523
Sfr274I	CTCGAG	1 cut(s)	2075
SinI	GGWCC	5 cut(s)	370, 1474, 1672, 1684, 1790
SlaI	CTCGAG	1 cut(s)	2075
SmiMI	CAYNNNNRTG	2 cut(s)	786, 2077
SmlI	CTYRAG	4 cut(s)	251, 784, 966, 2075
SmoI	CTYRAG	4 cut(s)	251, 784, 966, 2075
SsiI	CCGC	6 cut(s)	24, 54, 144, 373, 439, 1642
SspMI	CTAG	4 cut(s)	495, 1370, 1911, 2015
SstI	GAGCTC	1 cut(s)	79
StyD4I	CCNGG	2 cut(s)	413, 533
StyI	CCWWGG	1 cut(s)	748
TaqI	TCGA	7 cut(s)	156, 219, 334, 770, 1458, 1592, 2076
TatI	WGTACW	4 cut(s)	550, 631, 1261, 1412
TauI	GCSGC	2 cut(s)	56, 147
TfiI	GAWTC	3 cut(s)	41, 827, 902
Tru1I	TTAA	7 cut(s)	309, 987, 1254, 1382, 1463, 1748, 1983
Tru9I	TTAA	7 cut(s)	309, 987, 1254, 1382, 1463, 1748, 1983
TscAI	CASTG	4 cut(s)	184, 843, 849, 1927
TseFI	GTSAC	2 cut(s)	788, 2008
TseI	GCWGC	3 cut(s)	403, 452, 1732
Tsp45I	GTSAC	2 cut(s)	788, 2008
TspGWI	ACGGA	5 cut(s)	21, 333, 665, 748, 809
TspRI	CASTG	4 cut(s)	184, 843, 849, 1927
Van91I	CCANNNNNTGG	1 cut(s)	406
VneI	GTGCAC	1 cut(s)	1848
VpaK11BI	GGWCC	5 cut(s)	370, 1474, 1672, 1684, 1790
XagI	CCTNNNNNAGG	1 cut(s)	1526
XapI	RAATTY	5 cut(s)	304, 418, 880, 989, 1186
XceI	RCATGY	1 cut(s)	632
XhoI	CTCGAG	1 cut(s)	2075
XmiI	GTMKAC	1 cut(s)	491
XmnI	GAANNNNTTC	4 cut(s)	1188, 1230, 1443, 1971
XspI	CTAG	4 cut(s)	495, 1370, 1911, 2015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.